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A domestication history of dynamic adaptation and genomic deterioration in Sorghum
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Smith, Oliver, Nicholson, William V., Kistler, Logan, Mace, Emma, Clapham, Alan, Rose, Pamela, Stevens, Chris, Ware, Roselyn, Samavedam, Siva, Barker, Guy C., Jordan, David, Fuller, Dorian Q. and Allaby, Robin G. (2019) A domestication history of dynamic adaptation and genomic deterioration in Sorghum. Nature Plants, 5 (4). pp. 369-379. doi:10.1038/s41477-019-0397-9
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WRAP-domestication-history-dynamic-adaptation-genomic-deterioration-Sorghum-Allaby-2019.pdf - Accepted Version - Requires a PDF viewer. Download (994Kb) | Preview |
Official URL: http://dx.doi.org/10.1038/s41477-019-0397-9
Abstract
The evolution of domesticated cereals was a complex interaction of shifting selection pressures and repeated episodes of introgression. Genomes of archaeological crops have the potential to reveal these dynamics without being obscured by recent breeding or introgression. We report a temporal series of archaeogenomes of the crop sorghum (Sorghum bicolor) from a single locality in Egyptian Nubia. These data indicate no evidence for the effects of a domestication bottleneck, but instead reveal a steady decline in genetic diversity over time coupled with an accumulating mutation load. Dynamic selection pressures acted sequentially to shape architectural and nutritional domestication traits and to facilitate adaptation to the local environment. Later introgression between sorghum races allowed the exchange of adaptive traits and achieved mutual genomic rescue through an ameliorated mutation load. These results reveal a model of domestication in which genomic adaptation and deterioration were not focused on the initial stages of domestication but occurred throughout the history of cultivation.
| Item Type: | Journal Article | ||||||||||||
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| Subjects: | S Agriculture > SB Plant culture | ||||||||||||
| Divisions: | Faculty of Science, Engineering and Medicine > Science > Life Sciences (2010- ) | ||||||||||||
| Library of Congress Subject Headings (LCSH): | Sorghum -- History | ||||||||||||
| Journal or Publication Title: | Nature Plants | ||||||||||||
| Publisher: | Nature Publishing Group | ||||||||||||
| ISSN: | 2055-0278 | ||||||||||||
| Official Date: | 8 April 2019 | ||||||||||||
| Dates: |
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| Volume: | 5 | ||||||||||||
| Number: | 4 | ||||||||||||
| Page Range: | pp. 369-379 | ||||||||||||
| DOI: | 10.1038/s41477-019-0397-9 | ||||||||||||
| Status: | Peer Reviewed | ||||||||||||
| Publication Status: | Published | ||||||||||||
| Access rights to Published version: | Restricted or Subscription Access | ||||||||||||
| RIOXX Funder/Project Grant: |
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