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Genome sequencing data for wild and cultivated bananas, plantains and abacá
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Sambles, Christine, Venkatesan, Lakshmipriya, Shittu, Olanrewaju M., Harrison, James, Moore, Karen, Tripathi, Leena, Grant, Murray R., Warmington, Rachel and Studholme, David J. (2020) Genome sequencing data for wild and cultivated bananas, plantains and abacá. Data in Brief, 33 . 106341. doi:10.1016/j.dib.2020.106341
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WRAP-genome-sequencing-data-wild-cultivated-bananas-plantains-abacá-Murray-2020.pdf - Published Version - Requires a PDF viewer. Available under License Creative Commons Attribution 4.0. Download (3581Kb) | Preview |
Official URL: https://doi.org/10.1016/j.dib.2020.106341
Abstract
We performed shotgun genome sequencing on a total of 19 different Musa genotypes including representatives of wild banana species Musa acuminata and M. balibisiana, allopolyploid bananas and plantains, Fe'i banana, pink banana (also known as hairy banana) and abacá (also known as hemp banana). We aligned sequence reads against a previously sequenced reference genome and assessed ploidy and, in the case of allopolyploids, the contributions of the A and B genomes; this provides important quality-assurance data about the taxonomic identities of the sequenced plant material. These data will be useful for phylogenetics, crop improvement, studies of the complex story of intergenomic recombination in AAB and ABB allotriploid bananas and plantains and can be integrated into resources such as the Banana Genome Hub.
| Item Type: | Journal Article | ||||||||||||||||||
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| Subjects: | Q Science > QH Natural history > QH426 Genetics Q Science > QK Botany |
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| Divisions: | Faculty of Science > Life Sciences (2010- ) | ||||||||||||||||||
| Library of Congress Subject Headings (LCSH): | Bananas -- Genome mapping | ||||||||||||||||||
| Journal or Publication Title: | Data in Brief | ||||||||||||||||||
| Publisher: | Elsevier | ||||||||||||||||||
| ISSN: | 2352-3409 | ||||||||||||||||||
| Official Date: | December 2020 | ||||||||||||||||||
| Dates: |
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| Volume: | 33 | ||||||||||||||||||
| Article Number: | 106341 | ||||||||||||||||||
| DOI: | 10.1016/j.dib.2020.106341 | ||||||||||||||||||
| Status: | Peer Reviewed | ||||||||||||||||||
| Publication Status: | Published | ||||||||||||||||||
| Access rights to Published version: | Open Access | ||||||||||||||||||
| RIOXX Funder/Project Grant: |
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