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On the approximability of numerical taxonomy (fitting distances by tree metrics)

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UNSPECIFIED (1999) On the approximability of numerical taxonomy (fitting distances by tree metrics). SIAM JOURNAL ON COMPUTING, 28 (3). pp. 1073-1085. ISSN 0097-5397

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Abstract

We consider the problem of fitting an n x n distance matrix D by a tree metric T. Let epsilon be the distance to the closest tree metric under the L-infinity norm; that is, epsilon = min(T) {parallel to T ? D parallel to infinity}. First we present an O(n(2)) algorithm for finding a tree metric T such that parallel to T ? D parallel to infinity less than or equal to 3 epsilon. Second we show that it is NP-hard to find a tree metric T such that parallel to T ? D parallel to infinity < 9/8 epsilon. This paper presents the first algorithm for this problem with a performance guarantee.

Item Type: Journal Article
Subjects: Q Science > QA Mathematics > QA76 Electronic computers. Computer science. Computer software
Q Science > QA Mathematics
Journal or Publication Title: SIAM JOURNAL ON COMPUTING
Publisher: SIAM PUBLICATIONS
ISSN: 0097-5397
Date: 19 March 1999
Volume: 28
Number: 3
Number of Pages: 13
Page Range: pp. 1073-1085
Publication Status: Published
URI: http://wrap.warwick.ac.uk/id/eprint/14674

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