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Constructing computer virus phylogenies

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Goldberg, Leslie Ann, Goldberg, Paul W., Phillips, Cynthia A. and Sorkin, Gregory B. (1998) Constructing computer virus phylogenies. Journal of Algorithms, Volume 26 (Number 1). pp. 188-208. ISSN 0196-6774.

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Official URL: http://dx.doi.org/10.1006/jagm.1997.0897

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Abstract

There has been much recent algorithmic work on the problem of reconstructing the evolutionary history of biological species. Computer virus specialists are interested in finding the evolutionary history of computer viruses-a virus is often written using code fragments from one or more other viruses, which are its immediate ancestors. A phylogeny for a collection of computer viruses is a directed acyclic graph whose nodes are the viruses and whose edges map ancestors to descendants and satisfy the property that each code fragment is "invented" only once. To provide a simple explanation for the data, we consider the problem of constructing such a phylogeny with a minimum number of edges. This optimization problem is NP-hard, and we present positive and negative results for associated approximation problems. When tree solutions exist, they can be constructed and randomly sampled in polynomial time.

Item Type: Journal Article
Subjects: Q Science > QA Mathematics > QA76 Electronic computers. Computer science. Computer software
Q Science > QA Mathematics
Divisions: Faculty of Science, Engineering and Medicine > Science > Computer Science
Journal or Publication Title: Journal of Algorithms
Publisher: Academic Press
ISSN: 0196-6774
Official Date: January 1998
Dates:
DateEvent
January 1998Published
Volume: Volume 26
Number: Number 1
Number of Pages: 21
Page Range: pp. 188-208
Status: Peer Reviewed
Publication Status: Published
Access rights to Published version: Restricted or Subscription Access
Version or Related Resource: Goldberg, L.A., Goldberg, P.W., Phillips, C.A. and Sorking, G.B. (1996). Constructing computer virus phylogenies. University of Warwick. Department of Computer Science. (Department of Computer Science research report, 297).
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