The Library
Specific T-cell activation in an unspecific T-cell repertoire
Tools
Berg, Hugo van den, 1968-, Molina-Paris, Carmen and Sewell, Andrew K.. (2011) Specific T-cell activation in an unspecific T-cell repertoire. Science Progress, Vol.94 (No.3). pp. 245-264. ISSN 0036-8504
|
Text
WRAP_Van_den_berg_150811-theoreticaltcellimmunology.pdf - Accepted Version Download (815Kb) | Preview |
Official URL: http://dx.doi.org/10.3184/003685011X13139280383942
Abstract
T-cells are a vital type of white blood cell that circulate around our bodies, scanning for cellular abnormalities and infections. They recognise disease-associated antigens via a surface receptor called the T-cell antigen receptor (TCR). If there were a specific TCR for every single antigen, no mammal could possibly contain all the T-cells it needs. This is clearly absurd and suggests that T-cell recognition must, to the contrary, be highly degenerate. Yet highly promiscuous TCRs would appear to be equally impossible: they are bound to recognise self as well as non-self antigens. We review how contributions from mathematical analysis have helped to resolve the paradox of the promiscuous TCR. Combined experimental and theoretical work shows that TCR degeneracy is essentially dynamical in nature, and that the T-cell can differentially adjust its functional sensitivity to the salient epitope, "tuning up" sensitivity to the antigen associated with disease and "tuning down" sensitivity to antigens associated with healthy conditions. This paradigm of continual modulation affords the TCR repertoire, despite its limited numerical diversity, the flexibility to respond to almost any antigenic challenge while avoiding autoimmunity.
| Item Type: | Journal Article |
|---|---|
| Subjects: | Q Science > QR Microbiology |
| Divisions: | Faculty of Science > Mathematics |
| Library of Congress Subject Headings (LCSH): | T cells -- Mathematical models |
| Journal or Publication Title: | Science Progress |
| Publisher: | Science Reviews 2000 Ltd. |
| ISSN: | 0036-8504 |
| Date: | September 2011 |
| Volume: | Vol.94 |
| Number: | No.3 |
| Page Range: | pp. 245-264 |
| Identification Number: | 10.3184/003685011X13139280383942 |
| Status: | Peer Reviewed |
| Publication Status: | Published |
| Access rights to Published version: | Restricted or Subscription Access |
| References: | [1] Peter Parham. The Immune System. Garland Publishing, New York, 2000. [2] Clemens Utzny and Nigel John Burroughs. Stability of a diverse immunological memory is determined by T cell population dynamics. Bull. Math. Biol., 63:685 – 713, 2001. [3] Hugo A. van denBerg and Yu. N. Kiselev. Expansion and contraction of the cytotoxic T lymphocyte response—an optimal control approach. Bull. Math. Biol., 66:1345 – 1369, 2004. [4] Simon J. Davis, Shinji Ikemizu, Edward J. Evans, Lars Fugger, Talitha R. Bakker, and P. Anton van derMerwe. The nature of molecular recognition by T cells. Nature Immunol., 4:1 – 8, 2003. [5] Stefan Stevanovi´c and Hansjörg Schild. Quantitative aspects of T cell activation—peptide generation and editing by MHC class I molecule. Seminars in Immunology, 11:375 – 384, 1999. [6] N.J. Burroughs, Can Kesmir, and Rob de Boer. Discriminating self from nonself with short peptides from large proteomes. Immunogenetics, 56:311 – 320, 2004. [7] Guy Werlen and Ed Palmer. The TCR signalosome: A dynamic structure with expanding complexity. Current Opinion in Immunology, 14:299 – 305, 2002. [8] Hans-Georg Rammensee, Kirsten Falk, and Olaf Rötzschke. Peptides naturally presented by MHC class I molecules. Annu. Rev. Immunol., 11:213 – 244, 1993. [9] Polly Matzinger. The Danger model: A renewed sense of self. Science, 296: 301 – 305, 2002. [10] T. Petteri Arstila, Armanda Casrouge, Véronique Baron, Jos Even, Jean Kanellopoulos, and Philippe Kourilsky. A direct estimate of the human T cell receptor diversity. Science, 286:958 – 961, 1999. [11] Don Mason. A very high level of crossreactivity is an essential feature of the T-cell receptor. Immunol. Today, 19:395 – 404, 1998. [12] L. Ignatowicz, W. Rees, R. Pacholczyk, H. Ignatowicz, E. Kushnir, J. Kappler, and P. Marrack. T cells can be activated by peptides that are unrelated in sequence to their selecting peptide. Immunity, 7:179 – 186, 1997. [13] Stephen R. Jameson and Michael J. Bevan. T-cell selection. Current Opinion in Immunology, 10:214 – 219, 1998. [14] Oreste Acuto and Frédérique Michel. CD28-mediated co-stimulation: A quantitative support for TCR signalling. Nature Rev. Immunol., 2003. [15] S. L. Hutchinson, L.Wooldridge, S. Tafuro, B. Laugel, M. Glick, J. M. Boulter, B. K. Jakobsen, D. A. Price, and A. K. Sewell. The CD8 T cell coreceptor exhibits disproportionate biological activity at extremely low binding affinities. J. Biol. Chem., 278:24285 – 24293, 2003. [16] Israel Pecht and Dmitry M. Gakamsky. Spatial coordination of CD8 and TCR molecules controls antigen recognition by CD8+ T-cells. FEBS Lett., 579: 3336 – 3341, 2005. [17] Robert Maile, Catherine A. Siler, Samantha E. Kerry, Katherine E. Midkiff, Edward J. Collins, and Jeffrey A. Frelinger. Peripheral “CD8 tuning” dynamically modulates the size and responsiveness of an antigen-specific T cell pool in vivo. J. Immunol., 174:619 – 627, 2005. [18] Bruno Laugel, Hugo A. van den Berg, Emma Gostick, David K. Cole, Linda Wooldridge, Jonathan Boulter, Anita Milicic, David A. Price, and Andrew K. Sewell. Different T cell receptor affinity thresholds and CD8 coreceptor dependency govern cytotoxic T lymphocye activation and tetramer binding properties. J. Biol. Chem., 282:23799–23810, 2007. [19] Linda Wooldridge, Anna Lissina, Jonathan Vernazza, Emma Gostick, Bruno Laugel, Sarah L. Hutchinson, Fareed Mirza, P. Rod Dunbar, Jonathan M. Boulter, Meir Glick, Vincenzo Cerundolo, Hugo A. van den Berg, David A. Price, and Andrew K. Sewell. Enhanced immunogenicity of CTL antigens through mutation of the CD8 binding MHC class I invariant region. Eur. J. Immunol., 37:1323–1333, 2007. [20] Linda Wooldridge, Bruno Laugel, Julia Ekeruche, Mathew Clement, H. A. van den Berg, David A. Price, and Andrew K. Sewell. CD8 controls T cell cross-reactivity. J. Immunol., 185:4625–4632, 2010. [21] Hugo A. van denBerg and David A. Rand. Quantitative theories of T-cell responsiveness. Immunological Reviews, 216:81 – 92, 2007. [22] Carmen Molina-París and Grant Lythe, editors. Mathematical Models and Immune Cell Biology, 2011. Springer Verlag, New York. [23] Martha A. Alexander-Miller. Differential expansion and survival of high and low avidity cytotoxic T cell populations during the immune response to a viral infection. Cellular Immunology, 201:58 – 62, 2000. [24] Natali Zint, Ellen Baake, and Frank den Hollander. How T-cells use large deviations to recognize foreign antigens. J. Math. Biol., 57:841–861, 2008. [25] Florian Lipsmeier and Ellen Baake. Rare event simulation for T-cell activation. J. Stat. Phys., 134:537–566, 2009. [26] Yasushi Itoh and Ronald N. Germain. Single cell analysis reveals regulated hierarchical T cell antigen receptor signaling thresholds and intraclonal heterogeneity for individual cytokine responses of CD4+ cells. J. Exp. Med., 186:757 – 766, 1997. [27] Martin F. Bachmann, Marijke Barner, and Manfred Kopf. CD2 sets quantitative thresholds in T cell activation. J. Exp. Med., 190:1383 – 1391, 1999. [28] Hanne L. Ostergaard and Ian S. Trowbridge. Coclustering CD45 with CD4 or CD8 alters the phosphorylation and kinase activity of p56lck. J. Exp. Med., 172:347 – 350, 1990. [29] Hala S. Azzam, Jan B. DeJarnette, Kun Huang, Rebecca Emmons, Cheung- Seog Park, Connie L. Sommers, Dalal El-Khoury, Elisabeth W. Shores, and Paul E. Love. Fine tuning of TCR signaling by CD45. J. Immunol., 166:5464 – 5472, 2001. [30] Michelle L. Hermiston, Zheng Xu, and Arthur Weiss. CD45: A critical regulator of signalling thresholds in immune cells. Annu. Rev. Immunol., 21:107 – 137, 2003. [31] Hugo Antonius van denBerg and Andrew K. Sewell. Dynamic tuning of T cell receptor specificity by co-receptors and costimulation. In Carmen Molina- París and Grant Lythe, editors, Mathematical Models and Immune Cell Biology. Springer-Verlag, Berlin, 2011. [32] Alison V. Collins, Douglas W. Brodie, Robert J. C. Gilbert, Andrea Iaboni, Raquel Manso-Sancho, David I. Stuart, P. Anton van derMerwe, and Simon J. Davis. The interaction properties of costimulatory molecules revisited. Immunity, 17:201 – 210, 2002. [33] David M. Sansom, Claire N. Manzotti, and Yong Zheng. What’s the difference between CD80 and CD86? TRENDS Immunol., 24:313 – 318, 2003. [34] Yong Zheng, Claire N. Manzotti, Michael Liu, Fiona Burke, Karen I. Mead, and David M. Sansom. CD86 and CD80 differentially modulate the suppressive function of human regulatory T cells. J. Immunol., 172:2778 – 2784, 2004. [35] L. Wooldridge, H. A. van den Berg, M. Glick, E. Gostick, J. M. Brenchley, D. C. Douek, D. A. Price, and A. K. Sewell. Interaction between the CD8 coreceptor and MHC class I stabilizes TCR-antigen complexes at the cell surface. J. Biol. Chem., 280:27491 – 27501, 2005. [36] Hugo Antonius van denBerg, Linda Wooldridge, Bruno Laugel, and A. K. Sewell. Coreceptor CD8-driven modulation of T cell antigen receptor specificity. J. Theor. Biol., 249:395–408, 2007. [37] Marco A. Purbhoo, Jonathan M. Boulter, David A. Price, Anne-Lise Vuidepot, Christopher S. Hourigan, P. Rod Dunbar, Kara Olson, Sara J. Dawson, Rodney E. Phillips, Bent K. Jakobsen, John I. Bell, and Andrew K. Sewell. The human CD8 coreceptor effects cytotoxic T cell activation and antigen sensitivity primarily by mediating complete phosphorylation of the T cell receptor chain. J. Biol. Chem., 276:32786 – 32792, 2001. [38] Jung-Hyun Park, Stanley Adoro, Philip J. Lucas, Sophia D. Sarafova, Amala S. Alag, Loretta L. Doan, Batu Erman, Xiaolong Liu, Wilfried Ellmeier, Remy Bosselut, Lional Feigenbaum, and Alfred Singer. ‘Coreceptor tuning’: Cytokine signals transcriptionally tailor CD8 coreceptor expression to the self-specificity of the TCR. Nature Immunol., 8:1049–1058, 2007. [39] Stephen M. Anderton and David C. Wraith. Selection and fine-tuning of the autoimmune T cell repertoire. Nature Rev. Immunol., 2:487 – 497, 2002. [40] John W. Kappler, Neal Roehm, and Philippa Marrack. T cell tolerance by clonal elimination in the thymus. Cell, 49:273 – 280, 1987. [41] André J. Noest. Designing lymphocyte functional structure for optimal signal detection: Voilà, T cells. J. Theor. Biol., 207:195 – 216, 2000. [42] Hugo A. van denBerg and David A Rand. Antigen presentation on MHC molecules as a diversity filter that enhances immune efficacy. J. Theor. Biol., 224:249 – 267, 2003. [43] Don Mason. Some quantitative aspects of T cell repertoire selection: The requirement for regulatory T cells. Immunological Reviews, 182:80 – 88, 2001. [44] Benedict Seddon and Don Mason. The third function of the thymus. Immunol. Today, 21:95 – 99, 2000. [45] Hugo A. van denBerg and Carmen Molina-París. Thymic presentation of autoantigens and the efficiency of negative selection. J. Theor. Med., 5:1 – 22, 2003. [46] Hugo A. van denBerg and David A Rand. Foreigness as a matter of degree: The relative immunogenicity of peptide/MHC ligands. J. Theor. Biol., 231: 535 – 548, 2004. [47] Hugo A. van denBerg and David A Rand. Dynamics of T cell activation threshold tuning. J. Theor. Biol., 228:397 – 416, 2004. [48] Jacqueline McGlade, editor. Advanced Ecological Theory. Blackwell, 1999. [49] Amir Dembo and Ofer Zeitouni. Large Deviations Techniques and Applications. Springer Verlag, New York, 1998. [50] Emily Ruth Stirk, Carmen Molina-París, and Hugo Antonius van den Berg. Stochastic niche structure and diversity maintenance in the T cell repertoire. J. Theor. Biol., 255:237–249, 2008. [51] M. Toda, R. Kubo, and N. Saitô. Statistical Physics. Springer Verlag, New York, 1998. [52] Emily Ruth Stirk, Grant Lythe, Hugo Antonius van den Berg, Gareth A. D. Hurst, and Carmen Molina-París. The limiting conditional probability distribution in a stochastic model of T cell repertoire maintenance. Math. Biosci., 224:74–86, 2010. [53] Emily Ruth Stirk, Grant Lythe, Hugo Antonius van den Berg, and Carmen Molina-París. Stochastic competitive exclusion in the maintenance of the naíve t cell repertoire. J. Theor. Biol., 265:396–410, 2010. [54] Erik A. van Doorn. Quasi-stationary distributions and convergence to quasistationarity of birth-death processesquasi-stationary distributions and convergence to quasi-stationarity of birth-death processes. Adv, Appl. Prob., 23: 683–700, 1991. [55] Corinne Tanchot, François A. Lemonnier, Beatrice Pérarnau, Antonio A. Freitas, and Benedita Rocha. Differential requirements for survival and proliferation of CD8 naïve or memory T cells. Science, 276:2057 – 2062, 1997. [56] Henrique Veiga-Fernandes, Ulrich Walter, Christine Bourgeois, Angela McLean, and Benedita Rocha. Response of naïve and memory CD8+ T cells to antigen stimulation In Vivo. Nature Immunol., 1:47 – 53, 2000. [57] Hugo Antonius van den Berg. Mathematical Models of Biological Systems. Oxford University Press, 2011. [58] Hugo Antonius van denBerg, Nigel John Burroughs, and David Alan Rand. Quantifying the strength of ligand antagonism in TCR triggering. Bull. Mat. Biol., 64:781 – 808, 2002. [59] H. M. Taylor and S. Karlin. An Introduction to Stochastic Modelling. Academic Press, 1998. |
| URI: | http://wrap.warwick.ac.uk/id/eprint/36770 |
Data sourced from Thomson Reuters' Web of Knowledge
Actions (login required)
![]() |
View Item |
Tools
Tools

