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Modeling binding affinity at peptide-surface interfaces : the role of mutations

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Walsh, Tiffany R., Notman, Rebecca, Skelton, A. A., Liang, Taining and Tomasio, Susana de Miranda (2009) Modeling binding affinity at peptide-surface interfaces : the role of mutations. In: The 237th ACS National Meeting March 22-26, 2009, Salt Lake City, UT, 22-26 Mar 2009. Published in: American Chemical Society. Abstracts of Papers (at the National Meeting), Vol.237 3-NANO.

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Abstract

While many different peptide sequences have now been experimentally identified to have strong affinity for a huge range of materials, the question of why a given sequence binds so well while another does not remains to be properly answered. Use of molecular simluations is one of many complementary techniques that enables us to address these questions. In this contribution, a summary of our molecular simulation work in this area is presented. We have identified the crucial role of intra-peptide interactions in peptide-inorganic binding for both titania (below) and silica binders. We have also made a detailed investigation of the importance of tryptophan in nanotube-binding peptides via point mutations, and advance a hypothesis based on interfacial shape, explaining why aromatic residues might not dominate in graphite-binding peptides.

Item Type: Conference Item (Paper)
Subjects: Q Science > QD Chemistry
Q Science > QH Natural history > QH301 Biology
Divisions: Faculty of Science > Chemistry
Library of Congress Subject Headings (LCSH): Peptides, Interfaces (Physical sciences), Molecules -- Models -- Computer simulation, Mutation (Biology)
Journal or Publication Title: American Chemical Society. Abstracts of Papers (at the National Meeting)
Publisher: American Chemical Society
ISSN: 0065-7727
Date: 22 March 2009
Volume: Vol.237
Page Range: 3-NANO
Status: Peer Reviewed
Publication Status: Published
Access rights to Published version: Restricted or Subscription Access
Conference Paper Type: Paper
Title of Event: The 237th ACS National Meeting March 22-26, 2009
Type of Event: Conference
Location of Event: Salt Lake City, UT
Date(s) of Event: 22-26 Mar 2009
URI: http://wrap.warwick.ac.uk/id/eprint/40612

Data sourced from Thomson Reuters' Web of Knowledge

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