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TICAL - a web-tool for multivariate image clustering and data topology preserving visualization
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Langenkämper, Daniel, Kölling, Jan, Abouna, Sylvie, Khan, Michael, Niehaus, Karsten and Nattkemper, Tim W. (2011) TICAL - a web-tool for multivariate image clustering and data topology preserving visualization. In: MIAAB 2011 (Microscopic Image Analysis with Applications in Biology), Heidelberg, Germany, 2 Sep 2011. Published in: Proceedings of the 2011 Microscopic Image Analysis with Applications in Biology pp. 1-5.
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Text (Conference paper)
WRAP_Abouna_Tical_Nattkemperetal_preprint.pdf Download (1167Kb) | Preview |
Official URL: http://pub.uni-bielefeld.de/publication/2323705
Abstract
In life science research bioimaging is often used to study two kinds of features in a sample simultaneously: morphology and co-location of molecular components. While bioimaging technology is rapidly proposing and improving new multidimensional imaging platforms, bioimage informatics has to keep pace in order to develop algorithmic approaches to support biology experts in the complex task of data analysis. One particular problem is the availability and applicability of sophisticated image analysis algorithms via the web so different users can apply the same algorithms to their data (sometimes even to the same data to get the same results) and independently from her/his whereabouts and from the technical features of her/his computer. In this paper we describe TICAL, a visual data mining approach to multivariate microscopy analysis which can be applied fully through the web.We describe the algorithmic approach, the software concept and present results obtained for different example images.
| Item Type: | Conference Item (Paper) | ||||
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| Subjects: | Q Science > QH Natural history > QH301 Biology Q Science > QR Microbiology |
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| Divisions: | Faculty of Science, Engineering and Medicine > Science > Life Sciences (2010- ) | ||||
| Library of Congress Subject Headings (LCSH): | Data mining, Bioinformatics, Biology -- Data processing, Fluorescence microscopy | ||||
| Journal or Publication Title: | Proceedings of the 2011 Microscopic Image Analysis with Applications in Biology | ||||
| Official Date: | 2011 | ||||
| Dates: |
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| Page Range: | pp. 1-5 | ||||
| Status: | Peer Reviewed | ||||
| Publication Status: | Published | ||||
| Access rights to Published version: | Open Access | ||||
| Conference Paper Type: | Paper | ||||
| Title of Event: | MIAAB 2011 (Microscopic Image Analysis with Applications in Biology) | ||||
| Type of Event: | Conference | ||||
| Location of Event: | Heidelberg, Germany | ||||
| Date(s) of Event: | 2 Sep 2011 |
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