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RAMTaB : robust alignment of multi-tag bioimages
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Raza, Shan-e-Ahmed, Humayun, Ahmad, Abouna, Sylvie, Nattkemper, Tim W., Epstein, D. B. A., Khan, Michael and Rajpoot, Nasir M. (Nasir Mahmood) (2012) RAMTaB : robust alignment of multi-tag bioimages. PLoS One, Vol.7 (No.2). e30894. doi:10.1371/journal.pone.0030894 ISSN 1932-6203.
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WRAP_Raza_RAMTaB_Robust_alignment.pdf - Published Version Available under License Creative Commons Attribution. Download (3094Kb) | Preview |
Official URL: http://dx.doi.org/10.1371/journal.pone.0030894
Abstract
For the discovery of protein complexes and of functional protein networks within a cell, alignment of the tag images in a multi-tag fluorescence image stack is a key pre-processing step. The proposed framework is shown to produce accurate alignment results on both real and synthetic data. Our future work will use the aligned multi-channel fluorescence image data for normal and diseased tissue specimens to analyze molecular co-expression patterns and functional protein networks.
Item Type: | Journal Article | ||||
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Subjects: | Q Science > QH Natural history | ||||
Divisions: | Faculty of Science, Engineering and Medicine > Science > Computer Science Faculty of Science, Engineering and Medicine > Science > Life Sciences (2010- ) Faculty of Science, Engineering and Medicine > Science > Mathematics |
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Library of Congress Subject Headings (LCSH): | Imaging systems in biology -- Methodology | ||||
Journal or Publication Title: | PLoS One | ||||
Publisher: | Public Library of Science | ||||
ISSN: | 1932-6203 | ||||
Official Date: | 8 February 2012 | ||||
Dates: |
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Volume: | Vol.7 | ||||
Number: | No.2 | ||||
Page Range: | e30894 | ||||
DOI: | 10.1371/journal.pone.0030894 | ||||
Status: | Peer Reviewed | ||||
Publication Status: | Published | ||||
Access rights to Published version: | Restricted or Subscription Access | ||||
Date of first compliant deposit: | 19 December 2015 | ||||
Date of first compliant Open Access: | 19 December 2015 | ||||
Funder: | University of Warwick. Dept. of Computer Science, University of Warwick. Institute of Advanced Study | ||||
Grant number: | IAIC1003 (IAS) |
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