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Differential DNA methylation as a tool for noninvasive prenatal diagnosis (NIPD) of X chromosome aneuploidies

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Della Ragione, Floriana, Mastrovito, Paola, Campanile, Ciro, Conti, Anna, Papageorgiou, Elisavet A., Hultén, Maj A., Patsalis, Philippos C., Carter, Nigel P. and D'Esposito, Maurizio. (2010) Differential DNA methylation as a tool for noninvasive prenatal diagnosis (NIPD) of X chromosome aneuploidies. The Journal of Molecular Diagnostics, Vol.12 (No.6). pp. 797-807. ISSN 1525-1578

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Official URL: http://dx.doi.org/10.2353/jmoldx.2010.090199

Abstract

The demographic tendency in industrial countries to delay childbearing, coupled with the maternal age effect in common chromosomal aneuploidies and the risk to the fetus of invasive prenatal diagnosis, are potent drivers for the development of strategies for noninvasive prenatal diagnosis One breakthrough has been the discovery of differentially methylated cell free fetal DNA in the maternal circulation We describe novel bisulfite conversion and methylation sensitive enzyme digestion DNA methylation related approaches that we used to diagnose Turner syndrome from first trimester samples We used an X linked marker, EF3, and an autosomal marker, RASSF1A, to discriminate between placental and maternal blood cell DNA using real time methylation specific PCR after bisulfite conversion and real time PCR after methylation sensitive restriction digestion By normalizing EF3 amplifications versus RASSF1A outputs, we were able to calculate sex chromosome/autosome ratios in chorionic villus samples, thus permitting us to correctly diagnose Turner syndrome The identification of this new marker coupled with the strategy outlined here may be instrumental in the development of an efficient, noninvasive method of diagnosis of sex chromosome aneuploidies in plasma samples (J Mol Diagn 2010, 12 797-807, DOI 10.2353/jmoldx.2010.090199)

Item Type: Journal Article
Subjects: R Medicine > RB Pathology
Divisions: Faculty of Medicine > Warwick Medical School
Journal or Publication Title: The Journal of Molecular Diagnostics
Publisher: Elsevier Inc.
ISSN: 1525-1578
Date: November 2010
Volume: Vol.12
Number: No.6
Number of Pages: 11
Page Range: pp. 797-807
Identification Number: 10.2353/jmoldx.2010.090199
Status: Peer Reviewed
Publication Status: Published
Access rights to Published version: Restricted or Subscription Access
Funder: SAFE Network of Excellence European Commission, Wellcome Trust
Grant number: LSHB CT 2004 503243, WT077008
URI: http://wrap.warwick.ac.uk/id/eprint/4614

Data sourced from Thomson Reuters' Web of Knowledge

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