Chan, Andrew H., Jenkins, Paul A. and Song, Yun S.. (2012) Genome-wide fine-scale recombination rate variation in Drosophila melanogaster. PLoS Genetics, Vol.8 (No.12). e1003090. ISSN 1553-7390

Jenkins, Paul and Song, Yun S.. (2012) Padé approximants and exact two-locus sampling distributions. Annals of Applied Probability, Vol.22 (No.2). pp. 576-607. ISSN 1050-5164

Jenkins, Paul. (2012) Stopping-time resampling and population genetic inference under coalescent models. Statistical Applications in Genetics and Molecular Biology, Vol.11 (No.1). pp. 1-20. ISSN 2194-6302

Jenkins, Paul and Griffiths, Robert C.. (2011) Inference from samples of DNA sequences using a two-locus model. Journal of Computational Biology , Vol.18 (No.1). pp. 109-127. ISSN 1066-5277

Jenkins, Paul and Song, Yun S.. (2011) The effect of recurrent mutation on the frequency spectrum of a segregating site and the age of an allele. Theoretical Population Biology, Vol.80 (No.2). pp. 158-173. ISSN 0040-5809

Jenkins, Paul and Song, Yun S.. (2010) An asymptotic sampling formula for the coalescent with recombination. Annals of Applied Probability, Vol.20 (No.3). pp. 1005-1028. ISSN 1050-5164

Jenkins, Paul and Song, Yun S. (2009) Closed-form two-locus sampling distributions : accuracy and universality. Genetics, Vol.183 (No.3). pp. 1087-1103. ISSN 0016-6731

Griffiths, Robert C., Jenkins, Paul and Song, Yun S.. (2008) Importance sampling and the two-locus model with subdivided population structure. Advances in Applied Probability, Vol.40 (No.2). pp. 473-500. ISSN 0001-8678

Griffiths, Robert C., Jenkins, Paul and Song, Yun S.. (2008) Importance sampling and the two-locus model with subdivided population structure. Advances in Applied Probability, Vol.40 (No.2). pp. 473-500. ISSN 0001-8678

Jenkins, Paul, Lyngsø, Rune and Hein, Jotun (2006) How many transcripts does it take to reconstruct the splice graph? In: Algorithms in Bioinformatics. Lecture Notes in Computer Science, Vol.4175 . Berlin: Springer Verlag, pp. 103-114. ISBN 9783540395836