Journal Article

Adams, Sally, Pathak, Prachi, Kittelman, Maike, Jones, Alun R. C., Mallon, Eamonn B. and Pires-daSilva, Andre (2022) Sexual morph specialisation in a trioecious nematode balances opposing selective forces. Scientific Reports, 12 . 6402. doi:10.1038/s41598-022-09900-8

Robles, Pedro, Turner, Anisa, Zuco, Giusy, Adams, Sally, Paganopolou, Panagiota, Winton, Michael, Hill, Beth, Kache, Vikas, Bateson, Christine and Pires da Silva, André (2021) Parental energy-sensing pathways control intergenerational offspring sex determination in the nematode Auanema freiburgensis. BMC Biology, 19 (1). 102 . doi:10.1186/s12915-021-01032-1

Shih, P -Y., Lee, J. S., Shinya, R., Kanzaki, N., Pires-da Silva, André Francisco, Badroos, J. M., Goetz, E., Sapir, A. and Sternberg, P. W. (2019) Newly identified nematodes from Mono Lake exhibit extreme arsenic resistance. Current Biology, 29 (19). 3339-3344.E4. doi:10.1016/j.cub.2019.08.024

Tandonnet, Sophie, Koutsovoulos, Georgios D., Adams, Sally, Cloarec, Delphine, Parihar, Manish, Blaxter, Mark L. and Pires-da Silva, André Francisco (2019) Chromosome-wide evolution and sex determination in the three-sexed nematode auanema rhodensis. G3 Genes|Genomes|Genetics, 9 (3). pp. 1211-1230. doi:10.1534/g3.119.0011

Adams, Sally, Pathak, Prachi, Shao, Hongguang, Lok, James B. and Pires-da Silva, André Francisco (2019) Liposome-based transfection enhances RNAi and CRISPR-1 mediated mutagenesis in non-model nematode systems. Scientific Reports, 9 . 483. doi:10.1038/s41598-018-37036-1

Tandonnet, Sophie, Farrell, Maureen C., Koutsovoulos, Georgios D., Blaxter, Mark L., Parihar, Manish, Sadler, Penny L., Shakes, Diane C. and Pires da Silva, André (2018) Sex- and gamete-specific patterns of X chromosome segregation in a trioecious nematode. Current Biology, 28 (1). pp. 93-99. doi:10.1016/j.cub.2017.11.037

Ancell, Henry and Pires-da Silva, André Francisco (2017) Sex-specific lifespan and its evolution in nematodes. Seminars in Cell & Developmental Biology, 70 . pp. 122-129. doi:10.1016/j.semcdb.2017.05.012

Kanzaki, Natsumi, Kiontke, Karin, Tanaka, Ryusei, Schwarz, Anna, Müller-Reichert, Thomas, Chaudhuri, Jyotiska and Pires-da Silva, André Francisco (2017) Description of two three-gendered nematode species in the new genus Auanema (Rhabditina) that are models for reproductive mode evolution. Scientific Reports, 7 . 11135. doi:10.1038/s41598-017-09871-1

Winter, Ethan S., Schwarz, Anna, Fabig, Gunar, Feldman, Jessica L., Pires-da Silva, André Francisco, Müller-Reichert, Thomas, Sadler, Penny L. and Shakes, Diane C. (2017) Cytoskeletal variations in an asymmetric cell division support diversity in nematode sperm size and sex ratios. Development , 144 (18). pp. 3253-3263. doi:10.1242/dev.153841

Tandonnet, Sophie and Pires-da Silva, André Francisco (2016) Phenotypic plasticity and developmental innovations in nematodes. Current Opinion in Genetics and Development, 39 . pp. 8-13. doi:10.1016/j.gde.2016.05.018

Chaudhuri, Jyotiska, Bose, Neelanjan, Tandonnet, Sophie, Adams, Sally, Zuco, Giusy, Kache, Vikas, Parihar, Manish, Reuss, Stephan H. von, Schroeder, Frank C. and Pires-da Silva, André Francisco (2015) Mating dynamics in a nematode with three sexes and its evolutionary implications. Scientific Reports, 5 . pp. 1-10. 17676. doi:10.1038/srep17676

Pires-da Silva, André Francisco and Parihar, Manish (2012) Evo-devo of the germline and somatic gonad in nematodes. Sexual Development, Vol.7 (No.1-3). pp. 163-170. doi:10.1159/000337960

Shakes, Diane C., Neva, Bryan J., Huynh, Henry, Chaudhuri, Jyotiska and Pires-da Silva, André Francisco (2011) Asymmetric spermatocyte division as a mechanism for controlling sex ratios. Nature Communications, Vol.2 (No.1). Article no. 157. doi:10.1038/ncomms1160

Chaudhuri, Jyotiska, Kache, Vikas and Pires-da Silva, André Francisco (2011) Regulation of sexual plasticity in a nematode that produces males, females, and hermaphrodites. Current Biology, Vol.21 (No.18). pp. 1548-1551. doi:10.1016/j.cub.2011.08.009

(2011) The genome of Tetranychus urticae reveals herbivorous pest adaptations. Nature, Vol.479 (No.7374). pp. 487-492. doi:10.1038/nature10640

Chaudhuri, Jyotiska, Parihar, Manish and Pires-da Silva, André Francisco (2011) An introduction to Worm Lab : from culturing worms to mutagenesis. Journal of Visualized Experiments, Vol.47 . Article no. e2293. doi:10.3791/2293

Meik, Jesse M., Lawing, A. Michelle and Pires-da Silva, André Francisco (2010) Body size evolution in insular speckled rattlesnakes (Viperidae : Crotalus mitchellii). PLoS One, Volume 5 (Number 3). Article no. e9524. doi:10.1371/journal.pone.0009524

Meik, Jesse M. and Pires-da Silva, André Francisco (2009) Evolutionary morphology of the rattlesnake style. BMC Evolutionary Biology, Volume 9 (Number 1). Article no.35. doi:10.1186/1471-2148-9-35

Click, Arielle, Savaliya, Chandni H, Kienle, Simone, Herrmann, Matthias and Pires-da Silva, André Francisco (2009) Natural variation of outcrossing in the hermaphroditic nematode Pristionchus pacificus. BMC Evolutionary Biology, Volume 9 (Number 1). Article no.75. doi:10.1186/1471-2148-9-75

Long, T. and Pires-da Silva, André Francisco (2009) The snake box : a novel approach for safely restraining venomous snakes. The Herpetological Bulletin, Vol.108 . pp. 34-35.

Balastik, M., Ferraguti, F., Pires-da Silva, André Francisco, Lee, T. H., Alvarez-Bolado, G., Lu, K. P. and Gruss, P. (2008) Deficiency in ubiquitin ligase TRIM2 causes accumulation of neurofilament light chain and neurodegeneration. Proceedings of the National Academy of Sciences, Vol.105 (No.33). pp. 12016-12021. doi:10.1073/pnas.0802261105

Book Item

Moreira-Pinto, Beatriz and Pires da Silva, André (2017) Comparative reproductive biology in nematodes. In: Reference Module in Life Sciences. Elsevier BV. ISBN 9780128096338

Working or Discussion Paper

Tandonnet, Sophie, Farrell, Maureen C., Koutsovoulos, Georgios, Blaxter, Mark, Parihar, Manish, Sadler, Penny L., Shakes, Diane and Pires-da Silva, André Francisco (2017) Gender- and gamete-specific patterns of X chromosome segregation in a three-gendered nematode. Working Paper. BioRxiv: Cold Spring Harbour Laboratory. (Unpublished)

Journal Item

(2021) Towards genetic modification of plant-parasitic nematodes : delivery of macromolecules to adults and expression of exogenous mRNA in second stage juveniles. G3 Genes|Genomes|Genetics, 11 (2). jkaa058. doi:10.1093/g3journal/jkaa058

Dataset

Pires da Silva, André (2017) Data for Sex- and gamete-specific patterns of X chromosome segregation in a trioecious nematode. [Dataset]