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Browse by Warwick Author
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Jump to: BUPA Foundation | Biotechnology and Biological Sciences Research Council (Great Britain) (BBSRC) | Commonwealth Fund | Engineering and Physical Sciences Research Council (EPSRC) | European Regional Development Fund (ERDF) | European Research Council (ERC) | Global Alliance for TB Drug Development | Medical Research Council (Great Britain) (MRC) | National Center for Research Resources (U.S.) (NCRR) | National Human Genome Research Institute (U.S.) (NHGRI) | National Institute for Health Research (Great Britain) (NIHR) | National Institutes of Health (U.S.) (NIH) | Research Councils UK (RCUK) | Royal Society (Great Britain) | Royal Society (Great Britain). Wolfson Research Merit Award (RSWRMA) | Sardinia (Italy) | Seventh Framework Programme (European Commission) (FP7) | Spain. Ministerio de Economía y Competitividad [Ministry of Economy and Competitiveness] (MINECO) | University of Warwick. Institute of Advanced Study (IAS) | Warwick Medical School | Wellcome Trust | Wellcome Trust (London, England)
Number of items: 44.
BUPA Foundation
Gladstone, Rebecca A., Loman, Nicholas J., Constantinidou, Chrystala, Tocheva, Anna S., Jefferies, Johanna M. C., Faust, Saul N., O’Connor, Leigh, Chan, Jacqueline, Pallen, Mark J. and Clarke, Stuart C. (2013) Clonal expansion within pneumococcal serotype 6C after use of seven-valent vaccine. PLoS One, Volume 8 (Number 5). e64731. doi:10.1371/journal.pone.0064731 ISSN 1932-6203.
Biotechnology and Biological Sciences Research Council (Great Britain) (BBSRC)
Webber, Mark A., Whitehead, Rebekah N., Mount, Manuella, Loman, Nicholas J., Pallen, Mark J. and Piddock, Laura J. V. (2015) Parallel evolutionary pathways to antibiotic resistance selected by biocide exposure. Journal of antimicrobial chemotherapy, Volume 70 (Number 8). pp. 2241-2248. doi:10.1093/jac/dkv109 ISSN 0305-7453.
Sergeant, Martin J., Constantinidou, Chrystala, Cogan, Tristan A., Bedford, Michael R., Penn, Charles W. and Pallen, Mark J. (2014) Extensive microbial and functional diversity within the chicken cecal microbiome. PLoS ONE , Volume 9 (Number 3). Article number e91941. doi:10.1371/journal.pone.0091941 ISSN 1932-6203.
Bingle, Lewis E. H., Constantinidou, Chrystala, Shaw, Robert K., Islam, Md. Shahidul, Patel, Mala, Snyder, Lori A. S., Lee, David J., Penn, C. W., Busby, Stephen J. W. and Pallen, Mark J. (2014) Microarray analysis of the ler regulon in enteropathogenic and enterohaemorrhagic escherichia coli strains. PLoS One, Volume 9 (Number 1). e80160. doi:10.1371/journal.pone.0080160 ISSN 1932-6203.
Gladstone, Rebecca A., Loman, Nicholas J., Constantinidou, Chrystala, Tocheva, Anna S., Jefferies, Johanna M. C., Faust, Saul N., O’Connor, Leigh, Chan, Jacqueline, Pallen, Mark J. and Clarke, Stuart C. (2013) Clonal expansion within pneumococcal serotype 6C after use of seven-valent vaccine. PLoS One, Volume 8 (Number 5). e64731. doi:10.1371/journal.pone.0064731 ISSN 1932-6203.
Constantinidou, Chrystala, Sergeant, Martin J., Cogan, Tristan, Penn, Charles W. and Pallen, Mark J. (2012) High-throughput sequencing of 16S rRNA gene amplicons : effects of extraction procedure, primer length and annealing temperature. PLoS One, Volume 7 (Number 5). Article number e38094. doi:10.1371/journal.pone.0038094 ISSN 1932-6203.
Islam, Md. Shahidul, Shaw, Robert K., Frankel, Gad, Pallen, Mark J. and Busby, Stephen J. W. (2012) Translation of a minigene in the 5′ leader sequence of the enterohaemorrhagic Escherichia coli LEE1 transcription unit affects expression of the neighbouring downstream gene. Biochemical Journal, 441 (1). pp. 247-253. doi:10.1042/BJ20110912 ISSN 0264-6021.
Chan, Jacqueline, Halachev, Mihail R., Loman, Nicholas J., Constantinidou, Chrystala and Pallen, Mark J. (2012) Defining bacterial species in the genomic era : insights from the genus Acinetobacter. BMC Microbiology, 12 (1). 302. doi:10.1186/1471-2180-12-302 ISSN 1471-2180.
Halachev, Mihail R., Loman, Nicholas J. and Pallen, Mark J. (2011) Calculating orthologs in bacteria and archaea : a divide and conquer approach. PLoS One, Volume 6 (Number 12). Article number e28388. doi:10.1371/journal.pone.0028388 ISSN 1932-6203.
Loman, Nicholas J. and Pallen, Mark J. (2010) EntrezAJAX : direct web browser access to the Entrez Programming Utilities. Source Code for Biology and Medicine, volume 5 (Number 1). Article number 6. doi:10.1186/1751-0473-5-6 ISSN 1751-0473.
Snyder, Lori A. S., Loman, Nicholas J., Linton, James D., Langdon, Rebecca R., Weinstock, George M., Wren, Brendan and Pallen, Mark J. (2010) Simple sequence repeats in Helicobacter canadensis and their role in phase variable expression and C-terminal sequence switching. BMC Genomics, Volume 11 (Number 1). Article number 67. doi:10.1186/1471-2164-11-67 ISSN 1471-2164.
Commonwealth Fund
Islam, Md. Shahidul, Shaw, Robert K., Frankel, Gad, Pallen, Mark J. and Busby, Stephen J. W. (2012) Translation of a minigene in the 5′ leader sequence of the enterohaemorrhagic Escherichia coli LEE1 transcription unit affects expression of the neighbouring downstream gene. Biochemical Journal, 441 (1). pp. 247-253. doi:10.1042/BJ20110912 ISSN 0264-6021.
Engineering and Physical Sciences Research Council (EPSRC)
Guy, Collette S., Tichauer, Esther, Kay, Gemma L., Phillips, Daniel J., Bailey, Trisha L., Harrison, James, Furze, Christopher M., Millard, Andrew D., Gibson, Matthew I., Pallen, Mark J. and Fullam, Elizabeth (2017) Identification of the anti-mycobacterial functional properties of piperidinol derivatives. British Journal of Pharmacology, 174 (14). pp. 2183-2193. doi:10.1111/bph.13744 ISSN 1476-5381.
European Regional Development Fund (ERDF)
Remuiñán, Modesto J., Pérez-Herrán, Esther, Rullás, Joaquín, Alemparte, Carlos, Martínez-Hoyos, María, Dow, David J., Afari, Johnson, Mehta, Nalini, Esquivias, Jorge, Jiménez, Elena et al.
(2013)
Tetrahydropyrazolo[1,5-a]Pyrimidine-3-Carboxamide and N-Benzyl-6′,7′-Dihydrospiro[Piperidine-4,4′-Thieno[3,2-c]Pyran] analogues with bactericidal efficacy against Mycobacterium tuberculosis targeting MmpL3.
PLoS One, Volume 8
(Number 4).
Article number e60933.
doi:10.1371/journal.pone.0060933
ISSN 1932-6203.
European Research Council (ERC)
Guy, Collette S., Tichauer, Esther, Kay, Gemma L., Phillips, Daniel J., Bailey, Trisha L., Harrison, James, Furze, Christopher M., Millard, Andrew D., Gibson, Matthew I., Pallen, Mark J. and Fullam, Elizabeth (2017) Identification of the anti-mycobacterial functional properties of piperidinol derivatives. British Journal of Pharmacology, 174 (14). pp. 2183-2193. doi:10.1111/bph.13744 ISSN 1476-5381.
Global Alliance for TB Drug Development
Remuiñán, Modesto J., Pérez-Herrán, Esther, Rullás, Joaquín, Alemparte, Carlos, Martínez-Hoyos, María, Dow, David J., Afari, Johnson, Mehta, Nalini, Esquivias, Jorge, Jiménez, Elena et al.
(2013)
Tetrahydropyrazolo[1,5-a]Pyrimidine-3-Carboxamide and N-Benzyl-6′,7′-Dihydrospiro[Piperidine-4,4′-Thieno[3,2-c]Pyran] analogues with bactericidal efficacy against Mycobacterium tuberculosis targeting MmpL3.
PLoS One, Volume 8
(Number 4).
Article number e60933.
doi:10.1371/journal.pone.0060933
ISSN 1932-6203.
Medical Research Council (Great Britain) (MRC)
Kay, Gemma L., Sergeant, Martin J., Zhou, Zhemin, Chan, Jacqueline, Millard, Andrew D., Quick, Joshua, Szikossy, Ildikó, Pap, Ildikó, Spigelman, Mark, Loman, Nicholas J., Achtman, Mark, Donoghue, Helen D. and Pallen, Mark J. (2015) Eighteenth-century genomes show that mixed infections were common at time of peak tuberculosis in Europe. Nature Communications, Volume 6 . pp. 1-9. Article number 6717. doi:10.1038/ncomms7717 ISSN 2041-1723.
Halachev, Mihail R., Chan, Jacqueline, Constantinidou, Chrystala, Cumley, Nicola, Bradley, Craig, Smith-Banks, Matthew, Oppenheim, Beryl and Pallen, Mark J. (2014) Genomic epidemiology of a protracted hospital outbreak caused by multidrug-resistant Acinetobacter baumannii in Birmingham, England. Genome Medicine, Volume 6 (Number 11). pp. 1-13. Article number 70. doi:10.1186/s13073-014-0070-x ISSN 1756-994X.
Doughty, Emma L., Sergeant, Martin J., Ifedayo, Adetifa M. O., Antonio, Martin and Pallen, Mark J. (2014) Culture-independent detection and characterisation of Mycobacterium tuberculosis and M. africanum in sputum samples using shotgun metagenomics on a benchtop sequencer. PeerJ PrePrints . Article number e585 . doi:10.7717/peerj.585 ISSN 2167-9843.
Quick, Joshua , Constantinidou, Chrystala, Pallen, Mark J., Oppenheim, Beryl and Loman, Nicholas J. (2014) Draft genome sequence of Elizabethkingia meningoseptica isolated from a traumatic wound. Genome Announcements, Volume 2 (Number 3). Article number e00355-14. doi:10.1128/genomeA.00355-14 ISSN 2169-8287.
Chan, Jacqueline, Halachev, Mihail R., Loman, Nicholas J., Constantinidou, Chrystala and Pallen, Mark J. (2012) Defining bacterial species in the genomic era : insights from the genus Acinetobacter. BMC Microbiology, 12 (1). 302. doi:10.1186/1471-2180-12-302 ISSN 1471-2180.
Williams, Tiffany M., Loman, Nicholas J., Ebruke, Chinelo, Musher, Daniel M., Adegbola, Richard A., Pallen, Mark J., Weinstock, George M. and Antonio, Martin (2012) Genome analysis of a highly virulent serotype 1 strain of streptococcus pneumoniae from West Africa. PLoS One, Volume 7 (Number 10). Article number e26742. doi:10.1371/journal.pone.0026742 ISSN 1932-6203.
National Center for Research Resources (U.S.) (NCRR)
Bruce, A. G., Thouless, M. E. , Haines, A. S., Pallen, Mark J., Grundhoff, A. and Rose, T. N. (2015) Complete genome sequence of MneRV2, the pig-tailed macaque RV2 rhadinovirus, and evolutionary relationship with rhesus macaque RRV and human herpesvirus 8/KSHV. Journal of Virology, Volume 89 (Number 7). pp. 3888-3909. doi:10.1128/JVI.03597-14 ISSN 0022-538X.
National Human Genome Research Institute (U.S.) (NHGRI)
Williams, Tiffany M., Loman, Nicholas J., Ebruke, Chinelo, Musher, Daniel M., Adegbola, Richard A., Pallen, Mark J., Weinstock, George M. and Antonio, Martin (2012) Genome analysis of a highly virulent serotype 1 strain of streptococcus pneumoniae from West Africa. PLoS One, Volume 7 (Number 10). Article number e26742. doi:10.1371/journal.pone.0026742 ISSN 1932-6203.
National Institute for Health Research (Great Britain) (NIHR)
Halachev, Mihail R., Chan, Jacqueline, Constantinidou, Chrystala, Cumley, Nicola, Bradley, Craig, Smith-Banks, Matthew, Oppenheim, Beryl and Pallen, Mark J. (2014) Genomic epidemiology of a protracted hospital outbreak caused by multidrug-resistant Acinetobacter baumannii in Birmingham, England. Genome Medicine, Volume 6 (Number 11). pp. 1-13. Article number 70. doi:10.1186/s13073-014-0070-x ISSN 1756-994X.
Quick, Joshua, Cumley, Nicola, Wearn, Christopher M., Niebel, Marc, Constantinidou, Chrystala, Thomas, Christopher M., Pallen, Mark J., Moiemen, Naiem S., Bamford, Amy, Oppenheim, Beryl and Loman, Nicholas J. (2014) Seeking the source of Pseudomonas aeruginosa infections in a recently opened hospital : an observational study using whole-genome sequencing. BMJ Open, Volume 4 (Number 11). Article number e006278. doi:10.1136/bmjopen-2014-006278 ISSN 2044-6055.
Quick, Joshua , Constantinidou, Chrystala, Pallen, Mark J., Oppenheim, Beryl and Loman, Nicholas J. (2014) Draft genome sequence of Elizabethkingia meningoseptica isolated from a traumatic wound. Genome Announcements, Volume 2 (Number 3). Article number e00355-14. doi:10.1128/genomeA.00355-14 ISSN 2169-8287.
Chan, Jacqueline, Halachev, Mihail R., Loman, Nicholas J., Constantinidou, Chrystala and Pallen, Mark J. (2012) Defining bacterial species in the genomic era : insights from the genus Acinetobacter. BMC Microbiology, 12 (1). 302. doi:10.1186/1471-2180-12-302 ISSN 1471-2180.
National Institutes of Health (U.S.) (NIH)
Bruce, A. G., Thouless, M. E. , Haines, A. S., Pallen, Mark J., Grundhoff, A. and Rose, T. N. (2015) Complete genome sequence of MneRV2, the pig-tailed macaque RV2 rhadinovirus, and evolutionary relationship with rhesus macaque RRV and human herpesvirus 8/KSHV. Journal of Virology, Volume 89 (Number 7). pp. 3888-3909. doi:10.1128/JVI.03597-14 ISSN 0022-538X.
Williams, Tiffany M., Loman, Nicholas J., Ebruke, Chinelo, Musher, Daniel M., Adegbola, Richard A., Pallen, Mark J., Weinstock, George M. and Antonio, Martin (2012) Genome analysis of a highly virulent serotype 1 strain of streptococcus pneumoniae from West Africa. PLoS One, Volume 7 (Number 10). Article number e26742. doi:10.1371/journal.pone.0026742 ISSN 1932-6203.
Research Councils UK (RCUK)
Guy, Collette S., Tichauer, Esther, Kay, Gemma L., Phillips, Daniel J., Bailey, Trisha L., Harrison, James, Furze, Christopher M., Millard, Andrew D., Gibson, Matthew I., Pallen, Mark J. and Fullam, Elizabeth (2017) Identification of the anti-mycobacterial functional properties of piperidinol derivatives. British Journal of Pharmacology, 174 (14). pp. 2183-2193. doi:10.1111/bph.13744 ISSN 1476-5381.
Royal Society (Great Britain)
Guy, Collette S., Tichauer, Esther, Kay, Gemma L., Phillips, Daniel J., Bailey, Trisha L., Harrison, James, Furze, Christopher M., Millard, Andrew D., Gibson, Matthew I., Pallen, Mark J. and Fullam, Elizabeth (2017) Identification of the anti-mycobacterial functional properties of piperidinol derivatives. British Journal of Pharmacology, 174 (14). pp. 2183-2193. doi:10.1111/bph.13744 ISSN 1476-5381.
Royal Society (Great Britain). Wolfson Research Merit Award (RSWRMA)
Abrahams, Katherine A., Cox, Jonathan A. G., Spivey, Vickey L., Loman, Nicholas J., Pallen, Mark J., Constantinidou, Chrystala, Fernández, Raquel, Alemparte, Carlos, Remuiñán, Modesto J., Barros, David, Ballell, Lluis and Besra, Gurdyal S. (2012) Identification of novel Imidazo[1,2-a]pyridine inhibitors targeting M. tuberculosis QcrB. PLoS One, Volume 7 (Number 12). Article number e52951. doi:10.1371/journal.pone.0052951 ISSN 1932-6203.
Sardinia (Italy)
Kay, Gemma L., Sergeant, Martin J., Giuffra, Valentina, Bandiera, Pasquale, Milanese, Marco, Bramanti, Barbara, Bianucci, Raffaella and Pallen, Mark J. (2014) Recovery of a medieval Brucella melitensis genome using shotgun metagenomics. mBio, Volume 5 (Number 4). Article number e01337-14. doi:10.1128/mBio.01337-14 ISSN 2150-7511.
Seventh Framework Programme (European Commission) (FP7)
Remuiñán, Modesto J., Pérez-Herrán, Esther, Rullás, Joaquín, Alemparte, Carlos, Martínez-Hoyos, María, Dow, David J., Afari, Johnson, Mehta, Nalini, Esquivias, Jorge, Jiménez, Elena et al.
(2013)
Tetrahydropyrazolo[1,5-a]Pyrimidine-3-Carboxamide and N-Benzyl-6′,7′-Dihydrospiro[Piperidine-4,4′-Thieno[3,2-c]Pyran] analogues with bactericidal efficacy against Mycobacterium tuberculosis targeting MmpL3.
PLoS One, Volume 8
(Number 4).
Article number e60933.
doi:10.1371/journal.pone.0060933
ISSN 1932-6203.
Abrahams, Katherine A., Cox, Jonathan A. G., Spivey, Vickey L., Loman, Nicholas J., Pallen, Mark J., Constantinidou, Chrystala, Fernández, Raquel, Alemparte, Carlos, Remuiñán, Modesto J., Barros, David, Ballell, Lluis and Besra, Gurdyal S. (2012) Identification of novel Imidazo[1,2-a]pyridine inhibitors targeting M. tuberculosis QcrB. PLoS One, Volume 7 (Number 12). Article number e52951. doi:10.1371/journal.pone.0052951 ISSN 1932-6203.
Spain. Ministerio de Economía y Competitividad [Ministry of Economy and Competitiveness] (MINECO)
Remuiñán, Modesto J., Pérez-Herrán, Esther, Rullás, Joaquín, Alemparte, Carlos, Martínez-Hoyos, María, Dow, David J., Afari, Johnson, Mehta, Nalini, Esquivias, Jorge, Jiménez, Elena et al.
(2013)
Tetrahydropyrazolo[1,5-a]Pyrimidine-3-Carboxamide and N-Benzyl-6′,7′-Dihydrospiro[Piperidine-4,4′-Thieno[3,2-c]Pyran] analogues with bactericidal efficacy against Mycobacterium tuberculosis targeting MmpL3.
PLoS One, Volume 8
(Number 4).
Article number e60933.
doi:10.1371/journal.pone.0060933
ISSN 1932-6203.
University of Warwick. Institute of Advanced Study (IAS)
Guy, Collette S., Tichauer, Esther, Kay, Gemma L., Phillips, Daniel J., Bailey, Trisha L., Harrison, James, Furze, Christopher M., Millard, Andrew D., Gibson, Matthew I., Pallen, Mark J. and Fullam, Elizabeth (2017) Identification of the anti-mycobacterial functional properties of piperidinol derivatives. British Journal of Pharmacology, 174 (14). pp. 2183-2193. doi:10.1111/bph.13744 ISSN 1476-5381.
Warwick Medical School
Kay, Gemma L., Sergeant, Martin J., Zhou, Zhemin, Chan, Jacqueline, Millard, Andrew D., Quick, Joshua, Szikossy, Ildikó, Pap, Ildikó, Spigelman, Mark, Loman, Nicholas J., Achtman, Mark, Donoghue, Helen D. and Pallen, Mark J. (2015) Eighteenth-century genomes show that mixed infections were common at time of peak tuberculosis in Europe. Nature Communications, Volume 6 . pp. 1-9. Article number 6717. doi:10.1038/ncomms7717 ISSN 2041-1723.
Doughty, Emma L., Sergeant, Martin J., Ifedayo, Adetifa M. O., Antonio, Martin and Pallen, Mark J. (2014) Culture-independent detection and characterisation of Mycobacterium tuberculosis and M. africanum in sputum samples using shotgun metagenomics on a benchtop sequencer. PeerJ PrePrints . Article number e585 . doi:10.7717/peerj.585 ISSN 2167-9843.
Kay, Gemma L., Sergeant, Martin J., Giuffra, Valentina, Bandiera, Pasquale, Milanese, Marco, Bramanti, Barbara, Bianucci, Raffaella and Pallen, Mark J. (2014) Recovery of a medieval Brucella melitensis genome using shotgun metagenomics. mBio, Volume 5 (Number 4). Article number e01337-14. doi:10.1128/mBio.01337-14 ISSN 2150-7511.
Wellcome Trust
Guy, Collette S., Tichauer, Esther, Kay, Gemma L., Phillips, Daniel J., Bailey, Trisha L., Harrison, James, Furze, Christopher M., Millard, Andrew D., Gibson, Matthew I., Pallen, Mark J. and Fullam, Elizabeth (2017) Identification of the anti-mycobacterial functional properties of piperidinol derivatives. British Journal of Pharmacology, 174 (14). pp. 2183-2193. doi:10.1111/bph.13744 ISSN 1476-5381.
Wellcome Trust (London, England)
Kay, Gemma L., Sergeant, Martin J., Zhou, Zhemin, Chan, Jacqueline, Millard, Andrew D., Quick, Joshua, Szikossy, Ildikó, Pap, Ildikó, Spigelman, Mark, Loman, Nicholas J., Achtman, Mark, Donoghue, Helen D. and Pallen, Mark J. (2015) Eighteenth-century genomes show that mixed infections were common at time of peak tuberculosis in Europe. Nature Communications, Volume 6 . pp. 1-9. Article number 6717. doi:10.1038/ncomms7717 ISSN 2041-1723.
Islam, Md. Shahidul, Shaw, Robert K., Frankel, Gad, Pallen, Mark J. and Busby, Stephen J. W. (2012) Translation of a minigene in the 5′ leader sequence of the enterohaemorrhagic Escherichia coli LEE1 transcription unit affects expression of the neighbouring downstream gene. Biochemical Journal, 441 (1). pp. 247-253. doi:10.1042/BJ20110912 ISSN 0264-6021.
This list was generated on Thu Apr 18 18:35:09 2024 BST.