2016

Ploss, Tina N., Reilman, Ewoud, Monteferrante, Carmine G., Denham, Emma, Piersma, Sjouke, Lingner, Anja, Vehmaanperä, Jari, Lorenz, Patrick and van Dijl, Jan Maarten (2016) Homogeneity and heterogeneity in amylase production by Bacillus subtilis under different growth conditions. Microbial Cell Factories, 15 (1). doi:10.1186/s12934-016-0455-1

2015

Mars, Ruben A. T., Mendonça, Karoline, Denham, Emma and van Dijl, Jan Maarten (2015) The reduction in small ribosomal subunit abundance in ethanol-stressed cells of Bacillus subtilis is mediated by a SigB-dependent antisense RNA. Biochimica et Biophysica Acta (BBA) - Molecular Cell Research, 1853 (10). pp. 2553-2559. doi:10.1016/j.bbamcr.2015.06.009

Garcia De Gonzalo, C. V., Denham, Emma, Mars, Ruben A. T., Stülke, J., Donk, W. A. van der and Dijl, Jan Maarten van (2015) The phosphoenolpyruvate : sugar phosphotransferase system is involved in sensitivity to the glucosylated bacteriocin sublancin. Antimicrobial agents and chemotherapy, 59 (11). pp. 6844-6854. doi:10.1128/AAC.01519-15

Mars, Ruben A. T., Nicolas, Pierre, Ciccolini, Mariano, Reilman, Ewoud, Reder, Alexander, Schaffer, Marc, Mäder, Ulrike, Völker, Uwe, Dijl, Jan Maarten van and Denham, Emma (2015) Small regulatory RNA-induced growth rate heterogeneity of Bacillus subtilis. PLoS Genetics, Volume 11 (Number 3). pp. 1-27. Article number e1005046. doi:10.1371/journal.pgen.1005046

2014

Reilman, E., Mars, R. A. T., van Dijl, J. M. and Denham, Emma (2014) The multidrug ABC transporter BmrC/BmrD of Bacillus subtilis is regulated via a ribosome-mediated transcriptional attenuation mechanism. Nucleic Acids Research, 42 (18). pp. 11393-11407. doi:10.1093/nar/gku832

2013

Tsompanidou, E., Denham, Emma, Becher, D., de Jong, A., Buist, G., van Oosten, M., Manson, W. L., Back, J. W., van Dijl, J. M. and Dreisbach, A. (2013) Distinct roles of phenol-soluble modulins in spreading of staphylococcus aureus on wet surfaces. Applied and Environmental Microbiology, Volume 79 (Number 3). pp. 886-895. doi:10.1128/AEM.03157-12

Goosens, Vivianne J., Mars, Ruben A. T., Akeroyd, Michiel, Vente, Andre, Dreisbach, Annette, Denham, Emma, Kouwen, Thijs R. H. M., van Rij, Tjeerd, Olsthoorn, Maurien and Dijl, Jan Maarten van (2013) Is proteomics a reliable tool to probe the oxidative folding of bacterial membrane proteins? Antioxidants & Redox Signaling, Volume 18 (Number 10). pp. 1159-1164. doi:10.1089/ars.2012.4664

Tsompanidou, Eleni, Denham, Emma and Dijl, Jan Maarten van (2013) Phenol-soluble modulins, hellhounds from the staphylococcal virulence-factor pandemonium. Trends in Microbiology, Volume 21 (Number 7). pp. 313-315. doi:10.1016/j.tim.2013.04.007

Piersma, Sjouke, Denham, Emma, Drulhe, Samuel, Tonk, Rudi H. J., Schwikowski, Benno and Dijl, Jan Maarten van (2013) TLM-Quant : an open-source pipeline for visualization and quantification of gene expression heterogeneity in growing microbial cells. PLoS One, Volume 8 (Number 7). Article number e68696. doi:10.1371/journal.pone.0068696

2012

(2012) Condition-dependent transcriptome reveals high-level regulatory architecture in bacillus subtilis. Science, Volume 335 (Number 6072). pp. 1103-1106. doi:10.1126/science.1206848

Zweers, Jessica C., Nicolas, Pierre, Wiegert, Thomas, Dijl, Jan Maarten van and Denham, Emma (2012) Definition of the σW regulon of Bacillus subtilis in the absence of stress. PLoS One, Volume 7 (Number 11). Article number e48471. doi:10.1371/journal.pone.0048471

(2012) Global network reorganization during dynamic adaptations of bacillus subtilis metabolism. Science, Volume 335 (Number 6072). pp. 1099-1103. doi:10.1126/science.1206871

Tsompanidou, Eleni, Denham, Emma, Sibbald, Mark J. J. B., Yang, Xiao-mei, Seinen, Jolien, Friedrich, Alexander W., Buist, Girbe and Dijl, Jan Maarten van (2012) The sortase A substrates FnbpA, FnbpB, ClfA and ClfB antagonize colony spreading of staphylococcus aureus. PLoS One, Volume 7 (Number 9). Article number e44646. doi:10.1371/journal.pone.0044646

2011

van der Ploeg, René, Mäder, Ulrike, Homuth, Georg, Schaffer, Marc, Denham, Emma, Monteferrante, Carmine G., Miethke, Marcus, Marahiel, Mohamed A., Harwood, Colin R., Winter, Theresa, Hecker, Michael, Antelmann, Haike and Dijl, Jan Maarten van (2011) Environmental salinity determines the specificity and need for tat-dependent secretion of the YwbN protein in bacillus subtilis. PLoS One, Volume 6 (Number 3). Article number e18140. doi:10.1371/journal.pone.0018140

Tsompanidou, E., Sibbald, M. J. J. B., Chlebowicz, M. A., Dreisbach, A., Back, J. W., van Dijl, J. M., Buist, G. and Denham, Emma (2011) Requirement of the agr locus for colony spreading of staphylococcus aureus. Journal of Bacteriology, Volume 193 (Number 5). pp. 1267-1272. doi:10.1128/JB.01276-10

2010

Kouwen, T. R. H. M., Nielsen, A. K., Denham, Emma, Dubois, J. -Y. F., Dorenbos, R., Rasmussen, M. D., Quax, W. J., Freudl, R. and van Dijl, J. M. (2010) Contributions of the pre- and pro-regions of a staphylococcus hyicus lipase to secretion of a heterologous protein by bacillus subtilis. Applied and Environmental Microbiology, Volume 76 (Number 3). pp. 659-669. doi:10.1128/AEM.01671-09

2009

Kouwen, Thijs R. H. M., Antelmann, Haike, van der Ploeg, René, Denham, Emma, Hecker, Michael and Dijl, Jan Maarten van (2009) MscL of bacillus subtilis prevents selective release of cytoplasmic proteins in a hypotonic environment. Proteomics, Volume 9 (Number 4). pp. 1033-1043. doi:10.1002/pmic.200800483

Kouwen, T. R. H. M., Trip, E. N., Denham, Emma, Sibbald, M. J. J. B., Dubois, J. -Y. F. and van Dijl, J. M. (2009) The large mechanosensitive channel MscL determines bacterial susceptibility to the bacteriocin sublancin 168. Antimicrobial Agents and Chemotherapy, Volume 53 (Number 11). pp. 4702-4711. doi:10.1128/AAC.00439-09