2019

Ezer, Daphne and Keir, Joseph (2019) NITPicker : selecting time points for follow-up experiments. BMC Bioinformatics, 20 (1). 166. doi:10.1186/s12859-019-2717-5

Brestovitsky, Anna and Ezer, Daphne (2019) A mass participatory experiment provides a rich temporal profile of temperature response in spring onions. Plant Direct, 3 (3). e00126. doi:10.1002/pld3.126

Ezer, Daphne and Whitaker, Kirstie (2019) Data science for the scientific life cycle. eLife, 8 . e43979. doi:10.7554/eLife.43979

2018

Ma, Xiaoyan, Ezer, Daphne, Adryan, Boris and Stevens, Tim J. (2018) Canonical and single-cell Hi-C reveal distinct chromatin interaction sub-networks of mammalian transcription factors. Genome Biology, 19 (1). 174. doi:10.1186/s13059-018-1558-2

2017

Ezer, Daphne, Shepherd, Samuel J. K., Brestovitsky, Anna, Dickinson, Patrick, Cortijo, Sandra, Charoensawan, Varodom, Box, Mathew S., Biswas, Surojit, Jaeger, Katja and Wigge, Philip A. (2017) The G-box transcriptional regulatory code in Arabidopsis. Plant Physiology, 175 (2). pp. 628-640. doi:10.1104/pp.17.01086

Ezer, Daphne, Jung, Jae-Hoon, Lan, Hui, Biswas, Surojit, Gregoire, Laura, Box, Mathew S., Charoensawan, Varodom, Cortijo, Sandra, Lai, Xuelei, Stöckle, Dorothee, Zubieta, Chloe, Jaeger, Katja E. and Wigge, Philip A. (2017) The evening complex coordinates environmental and endogenous signals in Arabidopsis. Nature Plants, 3 (7). 17087. doi:10.1038/nplants.2017.87

2016

Jung, Jae-Hoon, Domijan, Mirela, Klose, Cornelia, Biswas, Surojit, Ezer, Daphne, Gao, Mingjun, Khattak, Asif Khan, Box, Mathew S., Charoensawan, Varodom, Cortijo, Sandra, Kumar, Manoj, Grant, Alastair, Locke, James C. W., Schäfer, Eberhard, Jaeger, Katja E. and Wigge, Philip A. (2016) Phytochromes function as thermosensors in Arabidopsis. Science, 354 (6314). pp. 886-889. doi:10.1126/science.aaf6005

Ioshikhes, Ilya, Ezer, Daphne, Moignard, Victoria, Göttgens, Berthold and Adryan, Boris (2016) Determining physical mechanisms of gene expression regulation from single cell gene expression data. PLoS Computational Biology, 12 (8). e1005072. doi:10.1371/journal.pcbi.1005072

2014

Ezer, Daphne, Zabet, Nicolae Radu and Adryan, Boris (2014) Physical constraints determine the logic of bacterial promoter architectures. Nucleic Acids Research, 42 (7). pp. 4196-4207. doi:10.1093/nar/gku078