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Jump to: Bill & Melinda Gates Foundation | Biotechnology and Biological Sciences Research Council (Great Britain) (BBSRC) | Deutsche Forschungsgemeinschaft (DFG) | Engineering and Physical Sciences Research Council (EPSRC) | European Research Council (ERC) | Heinrich-Heine-Universität Düsseldorf | Helmholtz-Zentrum für Infektionsforschung | Max-Planck-Gesellschaft zur Förderung der Wissenschaften [Max Planck Society for the Advancement of Science] | Medical Research Council (Great Britain) (MRC) | National Institute of General Medical Sciences (U.S.) (NIGMS) | National Institutes of Health (U.S.) (NIH) | Natural Environment Research Council (Great Britain) (NERC) | Norges forskningsråd | Novo Nordisk Foundation | Scotland. Rural and Environment Science and Analytical Services (RESAS) | Seventh Framework Programme (European Commission) (FP7) | Sweden. Stiftelsen för strategisk forskning [Foundation for strategic research] (SSF) | Technology Strategy Board (Great Britain) | Unilever (Firm) | United States. Army Research Office (ARO) | United States. Department of Energy | University of Glasgow. Lord Kelvin/Adam Smith Research scholarship | Wellcome Trust (London, England)
Number of items: 44.
Bill & Melinda Gates Foundation
Torondel, Belen, Ensink, Jeroen H.J., Gundogdu, Ozan, Ijaz, Umer Zeeshan, Parkhill, Julian, Abdelahi, Faraji, Nguyen, Viet-Anh, Sudgen, Steven, Gibson, Walter, Walker, Alan W. and Quince, Christopher (2016) Assessment of the influence of intrinsic environmental and geographical factors on the bacterial ecology of pit latrines. Microbial Biotechnology, 9 (2). pp. 209-223. doi:10.1111/1751-7915.12334 ISSN 1751-7907.
Biotechnology and Biological Sciences Research Council (Great Britain) (BBSRC)
Widder, Stefanie, Allen, Rosalind, Pfeiffer, Thomas, Curtis, Thomas P., Wiuf, Carsten, Sloan, William T., Cordero, Otto X., Brown, Sam P., Momeni, Babak, Shou, Wenying et al.
(2016)
Challenges in microbial ecology : building predictive understanding of community function and dynamics.
The ISME Journal, 2016
(10).
pp. 2557-2568.
doi:10.1038/ismej.2016.45
ISSN 1751-7362.
Rognes, Torbjørn, Flouri, Tomáš, Nichols, Ben, Quince, Christopher and Mahé, Frédéric (2016) VSEARCH : a versatile open source tool for metagenomics. PeerJ, 4 . e2584. doi:10.7717/peerj.2584 ISSN 2167-8359.
Deutsche Forschungsgemeinschaft (DFG)
Rognes, Torbjørn, Flouri, Tomáš, Nichols, Ben, Quince, Christopher and Mahé, Frédéric (2016) VSEARCH : a versatile open source tool for metagenomics. PeerJ, 4 . e2584. doi:10.7717/peerj.2584 ISSN 2167-8359.
Engineering and Physical Sciences Research Council (EPSRC)
Connelly, Stephanie, Shin, Seung G., Dillon, Robert J., Ijaz, Umer Z., Quince, Christopher, Sloan, William T. and Collins, Gavin (2017) Bioreactor scalability : laboratory-scale bioreactor design influences performance, ecology, and community physiology in expanded granular sludge bed bioreactors. Frontiers in Microbiology, 8 . 664. doi:10.3389/fmicb.2017.00664 ISSN 1664-302X.
Gregor, Ivan, Dröge, Johannes, Schirmer, Melanie, Quince, Christopher and McHardy, Alice C. (2016) PhyloPythiaS+ : a self-training method for the rapid reconstruction of low-ranking taxonomic bins from metagenomes. PeerJ, 4 . e1603. doi:10.7717/peerj.1603 ISSN 2167-8359.
Schirmer, Melanie, D’Amore, Rosalinda, Ijaz, Umer Z., Hall, Neil and Quince, Christopher (2016) Illumina error profiles : resolving fine-scale variation in metagenomic sequencing data. BMC Bioinformatics, 17 (1). pp. 1-15. 125. doi:10.1186/s12859-016-0976-y ISSN 1471-2105.
Haig, Sarah-Jane, Gauchotte-Lindsay, Caroline, Collins, Gavin and Quince, Christopher (2016) Bioaugmentation mitigates the impact of estrogen on coliform-grazing protozoa in slow sand filters. Environmental Science & Technology, 50 (6). pp. 3101-3110. doi:10.1021/acs.est.5b05027 ISSN 0013-936X.
Holmes, Ian, Harris, Keith and Quince, Christopher (2012) Dirichlet multinomial mixtures : generative models for microbial metagenomics. PLoS One, Volume 7 (Number 2). Article number e30126. doi:10.1371/journal.pone.0030126 ISSN 1932-6203.
Quince, Christopher, Lanzen, Anders, Davenport, Russell J. and Turnbaugh, Peter J. (2011) Removing noise from pyrosequenced amplicons. BMC Bioinformatics, Volume 12 (Number 1). Article number 38. doi:10.1186/1471-2105-12-38 ISSN 1471-2105.
European Research Council (ERC)
Connelly, Stephanie, Shin, Seung G., Dillon, Robert J., Ijaz, Umer Z., Quince, Christopher, Sloan, William T. and Collins, Gavin (2017) Bioreactor scalability : laboratory-scale bioreactor design influences performance, ecology, and community physiology in expanded granular sludge bed bioreactors. Frontiers in Microbiology, 8 . 664. doi:10.3389/fmicb.2017.00664 ISSN 1664-302X.
Haig, Sarah-Jane, Gauchotte-Lindsay, Caroline, Collins, Gavin and Quince, Christopher (2016) Bioaugmentation mitigates the impact of estrogen on coliform-grazing protozoa in slow sand filters. Environmental Science & Technology, 50 (6). pp. 3101-3110. doi:10.1021/acs.est.5b05027 ISSN 0013-936X.
Heinrich-Heine-Universität Düsseldorf
Gregor, Ivan, Dröge, Johannes, Schirmer, Melanie, Quince, Christopher and McHardy, Alice C. (2016) PhyloPythiaS+ : a self-training method for the rapid reconstruction of low-ranking taxonomic bins from metagenomes. PeerJ, 4 . e1603. doi:10.7717/peerj.1603 ISSN 2167-8359.
Helmholtz-Zentrum für Infektionsforschung
Gregor, Ivan, Dröge, Johannes, Schirmer, Melanie, Quince, Christopher and McHardy, Alice C. (2016) PhyloPythiaS+ : a self-training method for the rapid reconstruction of low-ranking taxonomic bins from metagenomes. PeerJ, 4 . e1603. doi:10.7717/peerj.1603 ISSN 2167-8359.
Max-Planck-Gesellschaft zur Förderung der Wissenschaften [Max Planck Society for the Advancement of Science]
Gregor, Ivan, Dröge, Johannes, Schirmer, Melanie, Quince, Christopher and McHardy, Alice C. (2016) PhyloPythiaS+ : a self-training method for the rapid reconstruction of low-ranking taxonomic bins from metagenomes. PeerJ, 4 . e1603. doi:10.7717/peerj.1603 ISSN 2167-8359.
Medical Research Council (Great Britain) (MRC)
Connelly, Stephanie, Shin, Seung G., Dillon, Robert J., Ijaz, Umer Z., Quince, Christopher, Sloan, William T. and Collins, Gavin (2017) Bioreactor scalability : laboratory-scale bioreactor design influences performance, ecology, and community physiology in expanded granular sludge bed bioreactors. Frontiers in Microbiology, 8 . 664. doi:10.3389/fmicb.2017.00664 ISSN 1664-302X.
Sinclair, Lucas, Ijaz, Umer Z., Jensen, Lars Juhl, Coolen, Marco J.L., Gubry-Rangin, Cecile, Chroňáková, Alica, Oulas, Anastasis, Pavloudi, Christina, Schnetzer, Julia, Weimann, Aaron, Ijaz, Ali, Eiler, Alexander, Quince, Christopher and Pafilis, Evangelos (2016) Seqenv : linking sequences to environments through text mining. PeerJ, 4 . e2690. doi:10.7717/peerj.2690 ISSN 2167-8359.
Rognes, Torbjørn, Flouri, Tomáš, Nichols, Ben, Quince, Christopher and Mahé, Frédéric (2016) VSEARCH : a versatile open source tool for metagenomics. PeerJ, 4 . e2584. doi:10.7717/peerj.2584 ISSN 2167-8359.
Gerasimidis, Konstantinos, Bertz, Martin, Quince, Christopher, Brunner, Katja, Bruce, Alanna, Combet, Emilie, Calus, Szymon, Loman, Nick and Ijaz, Umer Zeeshan (2016) The effect of DNA extraction methodology on gut microbiota research applications. BMC Research Notes, 9 (1). 365. doi:10.1186/s13104-016-2171-7 ISSN 1756-0500.
Schirmer, Melanie, D’Amore, Rosalinda, Ijaz, Umer Z., Hall, Neil and Quince, Christopher (2016) Illumina error profiles : resolving fine-scale variation in metagenomic sequencing data. BMC Bioinformatics, 17 (1). pp. 1-15. 125. doi:10.1186/s12859-016-0976-y ISSN 1471-2105.
Torondel, Belen, Ensink, Jeroen H.J., Gundogdu, Ozan, Ijaz, Umer Zeeshan, Parkhill, Julian, Abdelahi, Faraji, Nguyen, Viet-Anh, Sudgen, Steven, Gibson, Walter, Walker, Alan W. and Quince, Christopher (2016) Assessment of the influence of intrinsic environmental and geographical factors on the bacterial ecology of pit latrines. Microbial Biotechnology, 9 (2). pp. 209-223. doi:10.1111/1751-7915.12334 ISSN 1751-7907.
Haig, Sarah-Jane, Gauchotte-Lindsay, Caroline, Collins, Gavin and Quince, Christopher (2016) Bioaugmentation mitigates the impact of estrogen on coliform-grazing protozoa in slow sand filters. Environmental Science & Technology, 50 (6). pp. 3101-3110. doi:10.1021/acs.est.5b05027 ISSN 0013-936X.
D’Amore, Rosalinda, Ijaz, Umer Zeeshan, Schirmer, Melanie, Kenny, John G., Gregory, Richard, Darby, Alistair C., Shakya, Migun, Podar, Mircea, Quince, Christopher and Hall, Neil (2016) A comprehensive benchmarking study of protocols and sequencing platforms for 16S rRNA community profiling. BMC Genomics, 17 (1). doi:10.1186/s12864-015-2194-9 ISSN 1471-2164.
National Institute of General Medical Sciences (U.S.) (NIGMS)
Holmes, Ian, Harris, Keith and Quince, Christopher (2012) Dirichlet multinomial mixtures : generative models for microbial metagenomics. PLoS One, Volume 7 (Number 2). Article number e30126. doi:10.1371/journal.pone.0030126 ISSN 1932-6203.
National Institutes of Health (U.S.) (NIH)
Holmes, Ian, Harris, Keith and Quince, Christopher (2012) Dirichlet multinomial mixtures : generative models for microbial metagenomics. PLoS One, Volume 7 (Number 2). Article number e30126. doi:10.1371/journal.pone.0030126 ISSN 1932-6203.
Quince, Christopher, Lanzen, Anders, Davenport, Russell J. and Turnbaugh, Peter J. (2011) Removing noise from pyrosequenced amplicons. BMC Bioinformatics, Volume 12 (Number 1). Article number 38. doi:10.1186/1471-2105-12-38 ISSN 1471-2105.
Natural Environment Research Council (Great Britain) (NERC)
Connelly, Stephanie, Shin, Seung G., Dillon, Robert J., Ijaz, Umer Z., Quince, Christopher, Sloan, William T. and Collins, Gavin (2017) Bioreactor scalability : laboratory-scale bioreactor design influences performance, ecology, and community physiology in expanded granular sludge bed bioreactors. Frontiers in Microbiology, 8 . 664. doi:10.3389/fmicb.2017.00664 ISSN 1664-302X.
Sinclair, Lucas, Ijaz, Umer Z., Jensen, Lars Juhl, Coolen, Marco J.L., Gubry-Rangin, Cecile, Chroňáková, Alica, Oulas, Anastasis, Pavloudi, Christina, Schnetzer, Julia, Weimann, Aaron, Ijaz, Ali, Eiler, Alexander, Quince, Christopher and Pafilis, Evangelos (2016) Seqenv : linking sequences to environments through text mining. PeerJ, 4 . e2690. doi:10.7717/peerj.2690 ISSN 2167-8359.
Gerasimidis, Konstantinos, Bertz, Martin, Quince, Christopher, Brunner, Katja, Bruce, Alanna, Combet, Emilie, Calus, Szymon, Loman, Nick and Ijaz, Umer Zeeshan (2016) The effect of DNA extraction methodology on gut microbiota research applications. BMC Research Notes, 9 (1). 365. doi:10.1186/s13104-016-2171-7 ISSN 1756-0500.
Schirmer, Melanie, D’Amore, Rosalinda, Ijaz, Umer Z., Hall, Neil and Quince, Christopher (2016) Illumina error profiles : resolving fine-scale variation in metagenomic sequencing data. BMC Bioinformatics, 17 (1). pp. 1-15. 125. doi:10.1186/s12859-016-0976-y ISSN 1471-2105.
Torondel, Belen, Ensink, Jeroen H.J., Gundogdu, Ozan, Ijaz, Umer Zeeshan, Parkhill, Julian, Abdelahi, Faraji, Nguyen, Viet-Anh, Sudgen, Steven, Gibson, Walter, Walker, Alan W. and Quince, Christopher (2016) Assessment of the influence of intrinsic environmental and geographical factors on the bacterial ecology of pit latrines. Microbial Biotechnology, 9 (2). pp. 209-223. doi:10.1111/1751-7915.12334 ISSN 1751-7907.
D’Amore, Rosalinda, Ijaz, Umer Zeeshan, Schirmer, Melanie, Kenny, John G., Gregory, Richard, Darby, Alistair C., Shakya, Migun, Podar, Mircea, Quince, Christopher and Hall, Neil (2016) A comprehensive benchmarking study of protocols and sequencing platforms for 16S rRNA community profiling. BMC Genomics, 17 (1). doi:10.1186/s12864-015-2194-9 ISSN 1471-2164.
Norges forskningsråd
Rognes, Torbjørn, Flouri, Tomáš, Nichols, Ben, Quince, Christopher and Mahé, Frédéric (2016) VSEARCH : a versatile open source tool for metagenomics. PeerJ, 4 . e2584. doi:10.7717/peerj.2584 ISSN 2167-8359.
Novo Nordisk Foundation
Sinclair, Lucas, Ijaz, Umer Z., Jensen, Lars Juhl, Coolen, Marco J.L., Gubry-Rangin, Cecile, Chroňáková, Alica, Oulas, Anastasis, Pavloudi, Christina, Schnetzer, Julia, Weimann, Aaron, Ijaz, Ali, Eiler, Alexander, Quince, Christopher and Pafilis, Evangelos (2016) Seqenv : linking sequences to environments through text mining. PeerJ, 4 . e2690. doi:10.7717/peerj.2690 ISSN 2167-8359.
Scotland. Rural and Environment Science and Analytical Services (RESAS)
Torondel, Belen, Ensink, Jeroen H.J., Gundogdu, Ozan, Ijaz, Umer Zeeshan, Parkhill, Julian, Abdelahi, Faraji, Nguyen, Viet-Anh, Sudgen, Steven, Gibson, Walter, Walker, Alan W. and Quince, Christopher (2016) Assessment of the influence of intrinsic environmental and geographical factors on the bacterial ecology of pit latrines. Microbial Biotechnology, 9 (2). pp. 209-223. doi:10.1111/1751-7915.12334 ISSN 1751-7907.
Seventh Framework Programme (European Commission) (FP7)
Sinclair, Lucas, Ijaz, Umer Z., Jensen, Lars Juhl, Coolen, Marco J.L., Gubry-Rangin, Cecile, Chroňáková, Alica, Oulas, Anastasis, Pavloudi, Christina, Schnetzer, Julia, Weimann, Aaron, Ijaz, Ali, Eiler, Alexander, Quince, Christopher and Pafilis, Evangelos (2016) Seqenv : linking sequences to environments through text mining. PeerJ, 4 . e2690. doi:10.7717/peerj.2690 ISSN 2167-8359.
Sweden. Stiftelsen för strategisk forskning [Foundation for strategic research] (SSF)
Sinclair, Lucas, Ijaz, Umer Z., Jensen, Lars Juhl, Coolen, Marco J.L., Gubry-Rangin, Cecile, Chroňáková, Alica, Oulas, Anastasis, Pavloudi, Christina, Schnetzer, Julia, Weimann, Aaron, Ijaz, Ali, Eiler, Alexander, Quince, Christopher and Pafilis, Evangelos (2016) Seqenv : linking sequences to environments through text mining. PeerJ, 4 . e2690. doi:10.7717/peerj.2690 ISSN 2167-8359.
Technology Strategy Board (Great Britain)
D’Amore, Rosalinda, Ijaz, Umer Zeeshan, Schirmer, Melanie, Kenny, John G., Gregory, Richard, Darby, Alistair C., Shakya, Migun, Podar, Mircea, Quince, Christopher and Hall, Neil (2016) A comprehensive benchmarking study of protocols and sequencing platforms for 16S rRNA community profiling. BMC Genomics, 17 (1). doi:10.1186/s12864-015-2194-9 ISSN 1471-2164.
Unilever (Firm)
Rognes, Torbjørn, Flouri, Tomáš, Nichols, Ben, Quince, Christopher and Mahé, Frédéric (2016) VSEARCH : a versatile open source tool for metagenomics. PeerJ, 4 . e2584. doi:10.7717/peerj.2584 ISSN 2167-8359.
Gregor, Ivan, Dröge, Johannes, Schirmer, Melanie, Quince, Christopher and McHardy, Alice C. (2016) PhyloPythiaS+ : a self-training method for the rapid reconstruction of low-ranking taxonomic bins from metagenomes. PeerJ, 4 . e1603. doi:10.7717/peerj.1603 ISSN 2167-8359.
United States. Army Research Office (ARO)
Widder, Stefanie, Allen, Rosalind, Pfeiffer, Thomas, Curtis, Thomas P., Wiuf, Carsten, Sloan, William T., Cordero, Otto X., Brown, Sam P., Momeni, Babak, Shou, Wenying et al.
(2016)
Challenges in microbial ecology : building predictive understanding of community function and dynamics.
The ISME Journal, 2016
(10).
pp. 2557-2568.
doi:10.1038/ismej.2016.45
ISSN 1751-7362.
United States. Department of Energy
D’Amore, Rosalinda, Ijaz, Umer Zeeshan, Schirmer, Melanie, Kenny, John G., Gregory, Richard, Darby, Alistair C., Shakya, Migun, Podar, Mircea, Quince, Christopher and Hall, Neil (2016) A comprehensive benchmarking study of protocols and sequencing platforms for 16S rRNA community profiling. BMC Genomics, 17 (1). doi:10.1186/s12864-015-2194-9 ISSN 1471-2164.
University of Glasgow. Lord Kelvin/Adam Smith Research scholarship
Haig, Sarah-Jane, Gauchotte-Lindsay, Caroline, Collins, Gavin and Quince, Christopher (2016) Bioaugmentation mitigates the impact of estrogen on coliform-grazing protozoa in slow sand filters. Environmental Science & Technology, 50 (6). pp. 3101-3110. doi:10.1021/acs.est.5b05027 ISSN 0013-936X.
Wellcome Trust (London, England)
Torondel, Belen, Ensink, Jeroen H.J., Gundogdu, Ozan, Ijaz, Umer Zeeshan, Parkhill, Julian, Abdelahi, Faraji, Nguyen, Viet-Anh, Sudgen, Steven, Gibson, Walter, Walker, Alan W. and Quince, Christopher (2016) Assessment of the influence of intrinsic environmental and geographical factors on the bacterial ecology of pit latrines. Microbial Biotechnology, 9 (2). pp. 209-223. doi:10.1111/1751-7915.12334 ISSN 1751-7907.
This list was generated on Thu Mar 28 21:40:50 2024 GMT.