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Number of items: 99.
2023
Zadjelovic, Vinko, Wright, Robyn J., Borsetto, Chiara, Quartey, Jeannelle, Cairns, Tyler N., Langille, Morgan G. I., Wellington, Elizabeth M. H. and Christie-Oleza, Joseph Alexander (2023) Microbial hitchhikers harbouring antimicrobial-resistance genes in the riverine plastisphere. Microbiome, 11 (1). 225. doi:10.1186/s40168-023-01662-3 ISSN 2049-2618.
2022
Muscatt, George, Hilton, Sally, Raguideau, SΓ©bastien, Teakle, Graham R., Lidbury, Ian, Wellington, Elizabeth M. H., Quince, Christopher, Millard, Andrew D., Bending, Gary D. and Jameson, Eleanor (2022) Crop management shapes the diversity and activity of DNA and RNA viruses in the rhizosphere. Microbiome, 10 (1). 181. doi:10.1186/s40168-022-01371-3 ISSN 2049-2618.
Lidbury, Ian, Raguideau, SΓ©bastien, Borsetto, Chiara, Murphy, Andrew R. J., Bottrill, Andrew R., Liu, Senlin, Stark, Richard Jan, Fraser, Tandra, Goodall, Andrew, Jones, Alexandra M., Bending, Gary D., Tibbetts, Mark, Hammond, John P., Quince, Chris, Scanlan, David J. , Pandhal, Jagroop and Wellington, Elizabeth M. H. (2022) Stimulation of distinct rhizosphere bacteria drives phosphorus and nitrogen mineralization in oilseed rape under field conditions. mSystems, 7 (4). doi:10.1128/msystems.00025-22 ISSN 2379-5077.
Zadjelovic, Vinko, Erni-Cassola, Gabriel, Obrador-Viel, Theo, Lester, Daniel, Eley, Yvette, Gibson, Matthew I., Dorador, Cristina, Golyshin, Peter N., Black, Stuart, Wellington, Elizabeth M. H. and Christie-Oleza, Joseph A. (2022) A mechanistic understanding of polyethylene biodegradation by the marine bacterium Alcanivorax. Journal of Hazardous Materials, 436 . 129278. doi:10.1016/j.jhazmat.2022.129278 ISSN 0304-3894.
Murphy, Andrew, Scanlan, David J. , Chen, Yin, Bending, G. D., Hammond, John P., Wellington, Elizabeth M. H. and Lidbury, Ian (2022) 2-Aminoethylphosphonate utilization in pseudomonas putidaβBIRD-1 is controlled by multiple master regulators. Environmental Microbiology, 24 (4). pp. 1902-1917. doi:10.1111/1462-2920.15959 ISSN 1462-2912.
Waschulin, Valentin, Borsetto, Chiara, James, Robert, Newsham, Kevin K., Donadio, Stefano, Corre, Christophe and Wellington, Elizabeth M. H. (2022) Biosynthetic potential of uncultured Antarctic soil bacteria revealed through long-read metagenomic sequencing. The ISME Journal, 16 . pp. 101-111. doi:10.1038/s41396-021-01052-3 ISSN 1751-7362.
2021
Amos, Gregory C. A., Sergaki, Chrysi, Logan, Alastair, Iriarte, Rolland, Bannaga, Ayman, Chandrapalan, Subashini, Wellington, Elizabeth M. H., Rijpkema, Sjoerd and Arasaradnam, Ramesh P. (2021) Exploring how microbiome signatures change across inflammatory bowel disease conditions and disease locations. Scientific Reports, 11 (1). 18699. doi:10.1038/s41598-021-96942-z ISSN 2045-2322.
Rangama, Severine, Lidbury, Ian, Holden, Jennifer, Borsetto, Chiara, Murphy, Andrew, Hawkey, Peter and Wellington, E. M. H. (2021) Mechanisms involved in the active secretion of CTX-M-15 Ξ²-lactamase by pathogenic Escherichia coli ST131. Antimicrobial Agents and Chemotherapy, 65 (10). e0066321. doi:10.1128/AAC.00663-21 ISSN 0066-4804.
Borsetto, Chiara, Raguideau, SΓ©bastien, Travis, Emma Rachel, Kim, Dae-Wi, Lee, Do-Hoon, Bottrill, Andrew R., Stark, Richard Jan, Song, Lijiang, Cha, Chang-Jun, Pearson, Jonathan M., Quince, Christopher, Singer, Andrew C. and Wellington, Elizabeth M. H. (2021) Impact of sulfamethoxazole on a riverine microbiome. Water Research, 201 . 117382. doi:10.1016/j.watres.2021.117382 ISSN 0043-1354.
Murphy, Andrew, Scanlan, David J. , Chen, Yin, Adams, Nathan B. P., Cadman, William A., Bottrill, Andrew R., Bending, G. D., Hammond, John P., Hitchcock, Andrew, Wellington, Elizabeth M. H. and Lidbury, Ian D. E. A. (2021) Transporter characterisation reveals aminoethylphosphonate mineralisation as a key step in the marine phosphorus redox cycle. Nature Communications, 12 (1). 4554. doi:10.1038/s41467-021-24646-z ISSN 2041-1723.
Hillman, Evette B. M, Rijpkema, Sjoerd, Carson, Danielle, Arasaradnam, Ramesh P., Wellington, Elizabeth M. H. and Amos, Gregory C. A. (2021) Manipulating the microbiome : an alternative treatment for bile acid diarrhoea. Microbiology Research, 12 (2). pp. 335-353. doi:10.3390/microbiolres12020023 ISSN 2036-7481.
Lidbury, Ian, Borsetto, Chiara, Murphy, Andrew, Bottrill, Andrew R., Jones, Alexandra M., Bending, G. D., Hammond, John P., Chen, Yin, Wellington, Elizabeth M. H. and Scanlan, David J. (2021) Niche-adaptation in plant-associated Bacteroidetes favours specialisation in organic phosphorus mineralisation. ISME Journal, 15 . pp. 1040-1055. doi:10.1038/s41396-020-00829-2 ISSN 1751-7362.
2020
Murphy, Andrew, Travis, Emma Rachel, Hibberd, Victoria, Porter, David and Wellington, Elizabeth M. H. (2020) Evaluation of a fecal shedding test to detect badger social groups infected with Mycobacterium bovis. Journal of Clinical Microbiology, 59 (1). e01226-20. doi:10.1128/JCM.01226-20 ISSN 0095-1137.
Sheridan, Paul O., Raguideau, SΓ©bastien, Quince, Christopher, Holden, Jennifer, Thames Consortium, , Zhang, Lihong, Gubry-Rangin, CΓ©cile and Williams, Tom A. (2020) Gene duplication drives genome expansion in a major lineage of Thaumarchaeota. Nature Communications, 11 (1). 5494. doi:10.1038/s41467-020-19132-x ISSN 2041-1723.
Leungtongkam, Udomluk, Thummeepak, Rapee, Kitti, Thawatchai, Tasanapak, Kannipa, Wongwigkarn, Jintana, Styles, Kathryn, Wellington, Elizabeth M. H., Millard, Andrew D., Sagona, Antonia P. and Sitthisak, Sutthirat (2020) Genomic analysis reveals high virulence and antibiotic resistance amongst phage susceptible Acinetobacter baumannii. Scientific Reports, 10 . 16154. doi:10.1038/s41598-020-73123-y ISSN 2045-2322.
Styles, Kathryn, Thummeepak, Rapee, Leungtongkam, Udomluk, Smith, Sophie, Christie, Gabrielle S., Millard, Andrew D., Moat, John, Dowson, Christopher G., Wellington, Elizabeth M. H., Sitthisak, Sutthirat and Sagona, Antonia P. (2020) Investigating bacteriophages targeting the opportunistic pathogen Acinetobacter baumannii. Antibiotics, 9 (4). 200. doi:10.3390/antibiotics9040200 ISSN 2079-6382.
Lee, Kihyun, Kim, Dae-Wi, Lee, Do-Hoon, Kim, Yong-Seok, Bu, Ji-Hye, Cha, Ju-Hee, Thawng, Cung Nawl, Hwang, Eun-Mi, Seong, Hoon Je, Sul, Woo Jun, Wellington, Elizabeth M. H., Quince, Christopher and Cha, Chang-Jun (2020) Mobile resistome of human gut and pathogen drives anthropogenic bloom of antibiotic resistance. Microbiome, 8 (1). 2. doi:10.1186/s40168-019-0774-7 ISSN 2049-2618.
Alam, Mohammad T., Amos, Gregory C. A., Murphy, Andrew, Murch, Simon, Wellington, E. M. H. and Arasaradnam, Ramesh P. (2020) Microbial imbalance in inflammatory bowel disease patients at different taxonomic levels. Gut Pathogens, 12 . 2020. doi:10.1186/s13099-019-0341-6 ISSN 1757-4749.
2019
Zhang, Lihong, Calvo-Bado, Leo A., Murray, A. K., Amos, Gregory C. A., Hawkey, P. M., Wellington, E. M. H. and Gaze, William H. (2019) Novel clinically relevant antibiotic resistance genes associated with sewage sludge and industrial waste streams revealed by functional metagenomic screening. Environment International, 132 . p. 105120. doi:10.1016/j.envint.2019.105120 ISSN 0160-4120.
Simcox, Lee J., Pereira, Rui P. A., Wellington, E. M. H. and Macpherson, Julie V. (2019) Boron doped diamond as a low biofouling material in aquatic environments : assessment of pseudomonas aeruginosa biofilm formation. ACS Applied Materials and Interfaces, 11 . 28. doi:10.1021/acsami.9b07245 ISSN 1944-8244.
Kim, Dae-Wi, Thawng, Cung Nawl, Lee, Kihyun, Wellington, E. M. H. and Cha, Chang-Jun (2019) A novel sulfonamide resistance mechanism by two-component flavin-dependent monooxygenase system in sulfonamide-degrading actinobacteria. Environment International, 127 . pp. 206-215. doi:10.1016/j.envint.2019.03.046 ISSN 0160-4120.
Borsetto, Chiara, Amos, Gregory C. A., da Rocha, Ulisses Nunes, Mitchell, Alex L., Finn, Robert D., Laidi, Rabah Forar, Vallin, Carlos, Pearce, David A., Newsham, Kevin K. and Wellington, E. M. H. (2019) Microbial community drivers of PK/NRP gene diversity in selected global soils. Microbiome, 7 (1). 78. doi:10.1186/s40168-019-0692-8 ISSN 2049-2618.
2018
Larsson, D.G. Joakim, Andremont, Antoine, Bengtsson-Palme, Johan, Brandt, Kristian Koefoed, de Roda Husman, Ana Maria, Fagerstedt, Patriq, Fick, Jerker, Flach, Carl-Fredrik, Gaze, William H., Kuroda, Makoto et al.
(2018)
Critical knowledge gaps and research needs related to the environmental dimensions of antibiotic resistance.
Environment International, 117
.
pp. 132-138.
doi:10.1016/j.envint.2018.04.041
ISSN 0160-4120.
Lee, Learn-Han, Chan, Kok-Gan, Stach, Jem, Wellington, Elizabeth M. H. and Goh, Bey-Hing (2018) Editorial: The Search for Biological Active Agent(s) From Actinobacteria. Frontiers in Microbiology, 9 . 824. ISSN 1664-302X doi:10.3389/fmicb.2018.00824
Amos, Gregory C. A., Ploumakis, Semina, Zhang, Lihong, Hawkey, Peter M., Gaze, William H. and Wellington, E. M. H. (2018) The widespread dissemination of integrons throughout bacterial communities in a riverine system. The ISME Journal, 12 (3). pp. 681-691. doi:10.1038/s41396-017-0030-8 ISSN 1751-7362.
Amin, Dina, Abolmaaty, Assem , Tolba, Sahar , Abdallah, Nagwa and Wellington, E. M. H. (2018) Phylogenic characteristics of a unique antagonistic micromonospora Sp. Rc5 to S. aureus isolated from Sinai Desert of Egypt. Annual Research & Review in Biology, 22 (2). pp. 1-15. doi:10.9734/ARRB/2018/38318 ISSN 2347-565X.
2017
Konstantopoulou, Marina, Slator, Paddy J., Taylor, Charles R., Wellington, E. M. H., Allison, Gordon, Harper, Andrea L., Bancroft, Ian and Bugg, Timothy D. H. (2017) Variation in susceptibility to microbial lignin oxidation in a set of wheat straw cultivars : influence of genetic, seasonal and environmental factors. Nordic Pulp and Paper Research Journal, 32 (4). pp. 493-507. ISSN 0283-2631.
Kaur, Amandeep, Hernandez Fernaud, Juan Ramon, Aguilo-Ferretjans, Maria del Mar, Wellington, E. M. H. and Christie-Oleza, Joseph Alexander (2017) 100 days of marine Synechococcus β Ruegeria pomeroyi interaction, a detailed analysis of the exoproteome. Environmental Microbiology, 20 (2). pp. 785-799. doi:10.1111/1462-2920.14012 ISSN 1462-2912.
Lidbury, Ian, Fraser, Tandra, Murphy, Andrew, Scanlan, David J., Bending, G. D., Jones, Alexandra M., Moore, Jonathan D., Goodall, Andrew, Tibbett, Mark, Hammond, John P. and Wellington, E. M. H. (2017) The βknownβ genetic potential for microbial communities to degrade organic phosphorus is reduced in low-pH soils. MicrobiologyOpen . e00474. doi:10.1002/mbo3.474 ISSN 2045-8827.
Lidbury, Ian, Murphy, Andrew, Fraser, Tandra D., Bending, G. D., Jones, Alexandra M., Moore, Jonathan D., Goodall, Andrew, Tibbetts, Mark, Hammond, John P., Scanlan, David J. and Wellington, E. M. H. (2017) Identification of extracellular glycerophosphodiesterases in Pseudomonas and their role in soil organic phosphorus remineralisation. Scientific Reports, 7 (1). 2179. doi:10.1038/s41598-017-02327-6 ISSN 2045-2322.
King, Hayley C., Khera-Butler , Tanya, James, Phillip, Oakley, Brian B., Erenso, Girume, Aseffa, Abraham, Knight, Robert, Wellington, E. M. H. and Courtenay, Orin (2017) Environmental reservoirs of pathogenic mycobacteria across the Ethiopian biogeographical landscape. PLoS One, 12 (3). e0173811. doi:10.1371/journal.pone.0173811 ISSN 1932-6203.
2016
Lehmann, Katja, Bell, Thomas, Bowes, Michael J., Amos, Gregory C. A., Gaze, William H., Wellington, E. M. H. and Singer, Andrew C. (2016) Trace levels of sewage effluent are sufficient to increase class 1 integron prevalence in freshwater biofilms without changing the core community. Water Research, 106 . pp. 163-170. doi:10.1016/j.watres.2016.09.035 ISSN 0043-1354.
Lidbury, Ian, Murphy, Andrew, Scanlan, David J., Bending, G. D., Jones, Alexandra M., Moore, Jonathan D., Goodall, Amanda, Hammond, John P. and Wellington, E. M. H. (2016) Comparative genomic, proteomic and exoproteomic analyses of three Pseudomonas strains reveals novel insights into the phosphorus scavenging capabilities of soil bacteria. Environmental Microbiology, 18 (10). pp. 3535-3549. doi:10.1111/1462-2920.13390 ISSN 1462-2912.
Cleary, David W., Bishop, Alistair H., Zhang, Lihong, Topp, Edward, Wellington, E. M. H., Gaze, William H. and Smalla, Kornelia (2016) Long-term antibiotic exposure in soil is associated with changes in microbial community structure and prevalence of class 1 integrons. FEMS Microbiology Ecology, 92 (10). fiw159. doi:10.1093/femsec/fiw159 ISSN 0168-6496.
Salimraj, Ramya, Zhang, Lihong, Hinchliffe, Philip, Wellington, E. M. H., Brem, JΓΌrgen, Schofield, Christopher J., Gaze, William H. and Spencer, James (2016) Structural and biochemical characterization of Rm3, a subclass B3 Metallo-Ξ²-Lactamase identified from a functional metagenomic study. Antimicrobial Agents and Chemotherapy, 60 (10). pp. 5828-5840. doi:10.1128/AAC.00750-16 ISSN 0066-4804.
Cruz, JoΓ£o C. S., Maffioli, Sonia I., Bernasconi, Alice, Brunati, Cristina, Gaspari, Eleonora, Sosio, Margherita, Wellington, E. M. H. and Donadio, Stefano (2016) Allocyclinones, hyperchlorinated angucyclinones from Actinoallomurus. The Journal of Antibiotics . doi:10.1038/ja.2016.62 ISSN 0021-8820.
Gudeta, Dereje Dadi, Bortolaia, Valeria, Amos, Gregory C. A., Wellington, E. M. H., Brandt, Kristian K., Poirel, Laurent, Nielsen, Jesper Boye, Westh, Henrik and Guardabassi, Luca (2016) The soil microbiota harbors a diversity of Carbapenem-Hydrolyzing Γ-Lactamases of potential clinical relevance. Antimicrobial Agents and Chemotherapy, 60 (1). pp. 151-160. doi:10.1128/AAC.01424-15 ISSN 0066-4804.
2015
Muzafar, Mohd, Green, Laura E., Calvo-Bado, Leo A., Tichauer, Esther, King, Hayley C., James, Philip and Wellington, E. M. H. (2015) Survival of the ovine footrot pathogen Dichelobacter nodosus in different soils. Anaerobe, 38 . pp. 81-87. doi:10.1016/j.anaerobe.2015.12.010 ISSN 10759964.
Cruz, JoΓ£o C. S., Iorio, Marianna, Monciardini, Paolo, Simone, Matteo, Brunati, Cristina, Gaspari, Eleonora, Maffioli, Sonia I., Wellington, E. M. H., Sosio, Margherita and Donadio, Stefano (2015) Brominated variant of the Lantibiotic NAI-107 with enhanced antibacterial potency. Journal of Natural Products, 78 (11). pp. 2642-2647. doi:10.1021/acs.jnatprod.5b00576 ISSN 0163-3864.
Amos, Gregory C. A., Borsetto, Chiara, Laskaris, Paris, Krsek, Martin, Berry, Andrew E., Newsham, Kevin K., Calvo-Bado, Leo A., Pearce, David A., Vallin, Carlos and Wellington, E. M. H. (2015) Designing and implementing an assay for the detection of rare and divergent NRPS and PKS clones in European, Antarctic and Cuban soils. PLoS One, 10 (9). pp. 1-15. e0138327. doi:10.1371/journal.pone.0138327 ISSN 1932-6203.
Muzafar, Mohd, Calvo-Bado, Leo A., Green, Laura E., Smith, Edward M., Russell, Claire L., Grogono-Thomas, Rosemary and Wellington, E. M. H. (2015) The role of the environment in transmission of Dichelobacter nodosus between ewes and their lambs. Veterinary Microbiology, 179 (1-2). pp. 53-59. doi:10.1016/j.vetmic.2015.04.010 ISSN 0378-1135.
Christie-Oleza, Joseph Alexander, Sousoni, Despoina, Armengaud, Jean, Wellington, E. M. H. and Jones, Alexandra M. (2015) Defining a pipeline for metaproteomic analyses. Springer Protocols Handbooks . doi:10.1007/8623_2015_130 ISSN 1949-2448.
King, Hayley C., Murphy, Andrew, James, Phillip, Travis, Emma Rachel, Porter, David, Hung, Yu-Jiun, Sawyer, Jason, Cork, Jennifer, Delahay, Richard J., Gaze, William H., Courtenay, Orin and Wellington, E. M. H. (2015) The variability and seasonality of the environmental reservoir of Mycobacterium bovis shed by wild European badgers. Scientific Reports, 5 . pp. 1-7. 12318. doi:10.1038/srep12318 ISSN 2045-2322.
MΓΌller, Christina A., Oberauner-Wappis, Lisa, Peyman, Armin, Amos, Gregory C. A., Wellington, E. M. H. and Berg, Gabriele (2015) Mining for nonribosomal peptide synthetase and polyketide synthase genes revealed a high level of diversity in the sphagnum bog metagenome. Applied and Environmental Microbiology, 81 (15). pp. 5064-5072. doi:10.1128/AEM.00631-15 ISSN 0099-2240.
King, Hayley C., Murphy, Andrew, James, Phillip, Travis, Emma Rachel, Porter, David, Sawyer, Jason, Cork, Jennifer, Delahay, Richard J., Gaze, William H., Courtenay, Orin and Wellington, E. M. H. (2015) Performance of a non-invasive test for detecting mycobacterium bovis shedding in European badger (meles meles) populations. Journal of Clinical Microbiology, 53 . pp. 2316-2323. doi:10.1128/JCM.00762-15 ISSN 0095-1137.
Roca, Ignasi, Akova, Murat, Baquero, F., Carlet, Jean, Cavaleri, Marco, Coenen, Samuel, Cohen, J., Findlay, D., Gyssens, Inge, Heure, O. E. et al.
(2015)
The global threat of antimicrobial resistance : science for intervention.
New Microbes and New Infections, 6
.
pp. 22-29.
doi:10.1016/j.nmni.2015.02.007
ISSN 2052-2975.
Witcomb, Luci, Green, Laura E., Calvo-Bado, Leo A., Russell, Claire, Smith, Edward M., Grogono-Thomas, Rose and Wellington, E. M. H. (2015) First study of pathogen load and localisation of ovine footrot using fluorescence in situ hybridisation (FISH). Veterinary Microbiology, Volume 176 (Number 3β4). pp. 321-327. doi:10.1016/j.vetmic.2015.01.022 ISSN 0378-1135.
Amos, Gregory C. A., Carter, Abigail, Hawkey, Peter M., Gaze, William H. and Wellington, E. M. H. (2015) The hidden resistome of retail chicken meat. Journal of Global Antimicrobial Resistance, 3 (1). pp. 44-46. ISSN 2213-7165 doi:10.1016/j.jgar.2014.11.003
Amos, Gregory C. A., Gozzard, Emma , Carter, Charlotte E., Mead, A. (Andrew), Bowes, Mike J., Hawkey, P. M., Zhang, Lihong, Singer, Andrew C., Gaze, William H. and Wellington, E. M. H. (2015) Validated predictive modelling of the environmental resistome. The ISME Journal, 9 . p. 1467. doi:10.1038/ismej.2014.237 ISSN 1751-7362.
2014
Smith, Edward M., Green, Olivia, Calvo-Bado, Leo A., Witcomb, Luci, Grogono-Thomas, Rosemary, Russell, Claire L., Brown, J. C., Medley, Graham, Kilbride, A. L., Wellington, E. M. H. and Green, Laura E. (2014) Dynamics and impact of footrot and climate on hoof horn length in 50 ewes from one farm over a period of 10 months. The Veterinary Journal, Volume 201 (Number 3). pp. 295-301. doi:10.1016/j.tvjl.2014.05.021 ISSN 1090-0233.
Wellington, E. M. H. and Courtenay, Orin (2014) Comment : Badgers and Bovine TB β how can environmental microbiology help? Microbiology Today, 41 (3). p. 143. ISSN 1464-0570.
Amos, Gregory C. A., Zhang, Lihong, Hawkey, P. M., Gaze, William H. and Wellington, E. M. H. (2014) Functional metagenomic analysis reveals rivers are a reservoir for diverse antibiotic resistance genes. Veterinary Microbiology, Volume 171 (Number 3-4). pp. 441-447. doi:10.1016/j.vetmic.2014.02.017 ISSN 0378-1135.
Johnson-Rollings, Ashley S., Wright, H., Masciandaro, Grazia, Macci, Cristina, Doni, Serena, Calvo-Bado, Leo A., Slade, Susan E., Plou, Carlos Vallin and Wellington, E. M. H. (2014) Exploring the functional soil-microbe interface and exoenzymes through soil metaexoproteomics. The ISME Journal, Volume 8 (Number 10). pp. 2148-2150. doi:10.1038/ismej.2014.130 ISSN 1751-7362.
Witcomb, Luci, Green, Laura E., Kaler, Jasmeet, Ul-Hassan, Atiya, Calvo-Bado, Leo A., Medley, Graham, Grogono-Thomas, Rosemary and Wellington, E. M. H. (2014) A longitudinal study of the role of Dichelobacter nodosus and Fusobacterium necrophorum load in initiation and severity of footrot in sheep. Preventive Veterinary Medicine, Volume 115 (Number 1-2). pp. 48-55. doi:10.1016/j.prevetmed.2014.03.004 ISSN 0167-5877.
Amos, Gregory C. A., Hawkey, P. M., Gaze, William H. and Wellington, E. M. H. (2014) Waste water effluent contributes to the dissemination of CTX-M-15 in the natural environment. Journal of Antimicrobial Chemotherapy, Volume 69 (Number 7). pp. 1785-1791. doi:10.1093/jac/dku079 ISSN 0305-7453.
Mohamad, A. J., Zhu, Xinyao, Tian, Y. (Yuan), Wellington, E. M. H., Pfleging, W. and Liu, X. (2014) Investigating the effect of surface topography on hydrophobicity and bacterial attachment on polystyrene. Surface Topography : Metrology and Properties, 2 (2). 024003. doi:10.1088/2051-672X/2/2/024003 ISSN 2051-672X.
Russell, Claire L., Smith, Edward M., Calvo-Bado, Leo A., Green, Laura E., Wellington, E. M. H., Medley, Graham, Moore, Lynda J. and Grogono-Thomas, Rosemary (2014) Multiple locus VNTR analysis highlights that geographical clustering and distribution of Dichelobacter nodosus, the causal agent of footrot in sheep, correlates with inter-country movements. Infection, Genetics and Evolution , Volume 22 (Number 1). pp. 273-279. doi:10.1016/j.meegid.2013.05.026 ISSN 1567-1348.
Dealtry, Simone, Ding, Guo-Chun, Weichelt, Viola, Dunon, Vincent, SchlΓΌter, Andreas, Martini, MarΓa Carla, Papa, MarΓa Florencia Del, Lagares, Antonio, Amos, Gregory C. A., Wellington, E. M. H., Gaze, William H., Sipkema, Detmer, SjΓΆling, Sara, Springael, Dirk, Heuer, Holger, Elsas, J. D. van, Thomas, Christopher M. and Smalla, Kornelia (2014) Cultivation-independent screening revealed hot spots of IncP-1, IncP-7 and IncP-9 plasmid occurrence in different environmental habitats. PLoS One, Volume 9 (Number 2). Article number e89922. doi:10.1371/journal.pone.0089922 ISSN 1932-6203.
Roug, Annette, Geoghegan, Claire, Wellington, E. M. H., Miller, Woutrina A., Travis, Emma Rachel, Porter, David, Cooper, David, Clifford, Deana L., Mazet, Jonna A. K. and Parsons, Sven (2014) Utility of a fecal real-time PCR protocol for detection of Mycobacterium bovisInfection in African buffalo (syncerus caffer). Journal of Wildlife Diseases , Volume 50 (Number 1). pp. 140-142. ISSN 0090-3558 doi:10.7589/2013-07-159
Selama, Okba, Amos, Gregory C. A., Djenane, Zahia, Borsetto, Chiara, Laidi, Rabah Forar, Porter, David, Nateche, Farida, Wellington, E. M. H. and Hacène, Hocine (2014) Screening for genes coding for putative antitumor compounds, antimicrobial and enzymatic activities from haloalkalitolerant and haloalkaliphilic bacteria strains of Algerian Sahara soils. BioMed Research International, 2014 . Article number 317524. doi:10.1155/2014/317524 ISSN 2314-6133.
2013
Pontiroli, Alessandra, Khera, Tanya T., Oakley, Brian B., Mason, Sam, Dowd, Scot E., Travis, Emma Rachel, Erenso, Girum, Aseffa, Abraham, Courtenay, Orin and Wellington, E. M. H. (2013) Prospecting environmental mycobacteria: combined molecular approaches reveal unprecedented diversity. PLoS One, Volume 8 (Number 7). Article number e68648. doi:10.1371/journal.pone.0068648 ISSN 1932-6203.
Gaze, William H., Krone, Stephen M., Larsson, D.G. Joakim, Li, Xian-Zhi, Robinson, Joseph A., Simonet, Pascal, Smalla, Kornelia, Timinouni, Mohammed, Topp, Ed, Wellington, E. M. H., Wright, Gerard D. and Zhu, Yong-Guan (2013) Influence of humans on evolution and mobilization of environmental antibiotic resistome. Emerging Infectious Diseases , Volume 19 (Number 7). doi:10.3201/eid1907.120871 ISSN 1080-6059.
Engel, Katja, Ashby, Deborah, Brady, Sean F., Cowan, Don A., Doemer, John, Edwards, E. A., Fiebig, Klaus, Martens, Eric C., McCormac, Dennis, Mead, David A. et al.
(2013)
Meeting report : 1st international functional metagenomics workshop May 7β8, 2012, St. Jacobs, Ontario, Canada.
Standards in Genomic Sciences, Volume 8
(Number 1).
pp. 106-111.
doi:10.4056/sigs.3406845
ISSN 1944-3277.
Wellington, E. M. H., Boxall, Alistair B. A., Cross, Paul, Feil, Edward J., Gaze, William H., Hawkey, P. M., Johnson-Rollings, Ashley S., Jones, Davey L., Lee, Nick, Otten, Wilfred, Thomas, Christopher M. and Williams, A. Prysor (2013) The role of the natural environment in the emergence of antibiotic resistance in Gram-negative bacteria. The Lancet Infectious Diseases, Vol.13 (No.2). pp. 155-165. doi:10.1016/S1473-3099(12)70317-1 ISSN 1473-3099.
2012
Laskaris, Paris, Sekine, Takuya and Wellington, E. M. H. (2012) Diversity analysis of Streptomycetes and associated phosphotranspherase genes in soil. PLoS ONE, Vol.7 (No.4). e35756. doi:10.1371/journal.pone.0035756 ISSN 1932-6203.
Thomas, L., Hodgson, D. A., Wentzel, A., Nieselt, K., Ellingsen, T. E., Moore, Jonathan D., Morrissey, Edward R., Legaie, Roxane, Wohlleben, W., Rodriguez-Garcia, A., Martin, J. F., Burroughs, Nigel John, Wellington, E. M. H. and Smith, M. C. M. (2012) Metabolic switches and adaptations deduced from the proteomes of Streptomyces coelicolor wild type and phoP mutant grown in batch culture. Molecular & Cellular Proteomics, Vol.11 (No.2). M111.013797. doi:10.1074/mcp.M111.013797 ISSN 1535-9476.
Edwards, Lindsey A., O'Neill, Colette, Furman, Mark A., Hicks, Susan, Torrente, Franco, PΓ©rez-Machado, Miguel, Wellington, E. M. H., Phillips, Alan D. and Murch, Simon (2012) Enterotoxin-producing staphylococci cause intestinal inflammation by a combination of direct epithelial cytopathy and superantigen-mediated T-cell activation. Inflammatory Bowel Diseases, Vol.18 (No.4). pp. 624-640. doi:10.1002/ibd.21852 ISSN 1078-0998.
Pearce, David A., Newsham, Kevin K., Thorne, Michael A. S., Calvo-Bado, Leo A., Krsek, Martin, Laskaris, Paris, Hodson, Andrew J. and Wellington, E. M. H. (2012) Metagenomic analysis of a southern maritime Antarctic soil. Frontiers in Microbiology, Volume 3 . Article number 403. doi:10.3389/fmicb.2012.00403 ISSN 1664-302X.
MartΓn, Juan F. , Santos-Beneit, Fernando, RodrΓguez-GarcΓa, Antonio , Sola-Landa, Alberto , Smith, Margaret C. M., Ellingsen, Trond E., Nieselt, Kay , Burroughs, Nigel John and Wellington, E. M. H. (2012) Transcriptomic studies of phosphate control of primary and secondary metabolism in Streptomyces coelicolor. Applied Microbiology and Biotechnology, Vol.95 (No.1). pp. 61-75. doi:10.1007/s00253-012-4129-6 ISSN 0175-7598.
2011
Tsibidis, George D., Burroughs, Nigel John, Gaze, William H. and Wellington, E. M. H. (2011) Semi-automated Acanthamoeba polyphaga detection and computation of Salmonella typhimurium concentration in spatio-temporal images. Micron, Vol.42 (No.8). pp. 911-920. doi:10.1016/j.micron.2011.06.010 ISSN 0968-4328.
Calvo-Bado, Leo A., Oakley, Brian B., Dowd, Scot E., Green, Laura E., Medley, Graham, Ul-Hassan, Atiya, Bateman, Vicky, Gaze, William H., Witcomb, Luci, Grogono-Thomas, Rosemary, Kaler, Jasmeet, Russell, Claire L. and Wellington, E. M. H. (2011) Ovine pedomics : the first study of the ovine foot 16S rRNA-based microbiome. ISME Journal, Vol.5 (No.9). pp. 1426-1437. doi:10.1038/ismej.2011.25 ISSN 1751-7362.
Pontiroli, Alessandra, Travis, Emma Rachel, Sweeney, F. P., Porter, David, Gaze, William H., Mason, Sam, Hibberd, V., Holden, Jennifer, Courtenay, Orin and Wellington, E. M. H. (2011) Pathogen quantitation in complex matrices : a multi-operator comparison of DNA extraction methods with a novel assessment of PCR inhibition. PLoS One, Vol.6 (No.3). Article number e17916. doi:10.1371/journal.pone.0017916 ISSN 1932-6203.
Byrne-Bailey, K. G., Gaze, William H., Zhang, Lihong, Kay, Paul, Boxall, Alistair B.A. , Hawkey, P. M. and Wellington, E. M. H. (2011) Integron prevalence and diversity in manured soil. Applied and Environmental Microbiology, Vol.77 (No.2). pp. 684-687. doi:10.1128/AEM.01425-10 ISSN 0099-2240.
Gaze, William H., Zhang, Lihong, Abdouslam, Nouradin A., Hawkey, P. M., Calvo-Bado, Leo A., Royle, Jeremy, Brown, Helen, Davis, Susan, Kay, Paul, Boxall, Alistair B. A. and Wellington, E. M. H. (2011) Impacts of anthropogenic activity on the ecology of class 1 integrons and integron-associated genes in the environment. ISME Journal, Vol.5 (No.8). pp. 1253-1261. doi:10.1038/ismej.2011.15 ISSN 1751-7362.
Anukool, Usanee, OβNeill, Colette E., Butr-Indr, Bordin, Hawkey, P. M., Gaze, William H. and Wellington, E. M. H. (2011) Meticillin-resistant Staphylococcus aureus in pigs from Thailand. International Journal of Antimicrobial Agents, Volume 38 (Number 1). pp. 86-87. doi:10.1016/j.ijantimicag.2011.02.018 ISSN 0924-8579.
Gaze, William H., Morgan, Gina, Zhang, Lihong and Wellington, E. M. H. (2011) Mimivirus-like particles in Acanthamoebae from sewage sludge. Emerging Infectious Diseases , Volume 17 (Number 6). pp. 1127-1129. doi:10.3201/eid1706.101282 ISSN 1080-6059.
Reddy, T. V. K., Mahmood, Shaik, Laskaris, Paris, Reddy, Y. Harish Kumar, Wellington, E. M. H. and Idris, M. M. (2011) Streptomyces hyderabadensis sp. nov., an actinomycete isolated from soil. International Journal of Systematic and Evolutionary Microbiology, Volume 61 (Number 1). pp. 76-80. doi:10.1099/ijs.0.020446-0 ISSN 1466-5026.
Travis, Emma Rachel, Gaze, William H., Pontiroli, Alessandra, Sweeney, Francis P., Porter, David, Mason, Sam, Keeling, Matthew James, Jones, Rebecca M., Sawyer, Jason, Aranaz, Alicia, Castellanos Rizaldos, Elena, Cork, Jennifer, Delahay, Richard J., Wilson, Gavin J., Hewinson, R. Glyn, Courtenay, Orin and Wellington, E. M. H. (2011) An inter-laboratory validation of a real time PCR assay to measure host excretion of bacterial pathogens, particularly of mycobacterium bovis. PLoS One, Vol.6 (No.11). e27369. doi:10.1371/journal.pone.0027369 ISSN 1932-6203.
2010
Kaler, Jasmeet, Medley, Graham, Grogono-Thomas, Rosemary, Wellington, E. M. H., Calvo-Bado, Leo A., Wassink, Geert J., King, Elisabeth M., Moore, L. J., Russell, Claire L. and Green, Laura E. (2010) Factors associated with changes of state of foot conformation and lameness in a flock of sheep. Preventive Veterinary Medicine, Vol.97 (No.3/4). pp. 237-244. doi:10.1016/j.prevetmed.2010.09.019 ISSN 0167-5877.
Calvo-Bado, Leo A., Green, Laura E., Medley, Graham, Ul-Hassan, Atiya, Buller, Nicky B., Kaler, Jasmeet, Russell, Claire L., Kennan, Ruth M., Rood, Julian I., Wellington, E. M. H. and Grogono-Thomas, Rosemary (2010) Detection and diversity of a putative novel heterogeneous polymorphic proline-glycine repeat (Pgr) protein in the footrot pathogen Dichelobacter nodosus. Veterinary Microbiology, Vol.147 (No.3-4). pp. 358-366. doi:10.1016/j.vetmic.2010.06.024 ISSN 0378-1135.
Laskaris, Paris, Tolba, Sahar, Calvo-Bado, Leo A. and Wellington, E. M. H. (2010) Corrigendum to "Coevolution of antibiotic production and counter-resistance in soil bacteria". Environmental Microbiology, Vol.12 (No.7). p. 2048. ISSN 1462-2912 doi:10.1111/j.1462-2920.2010.02262.x
Boxall, Alistair, Hardy, Anthony, Beulke, Sabine, Boucard, Tatiana, Burgin, Laura, Falloon, Peter, Haygarth, Philip, Hutchinson, Thomas, Kovats, Sari, Leonardi, Giovanni et al.
(2010)
Impacts of climate change on indirect human exposure to pathogens and chemicals from agriculture.
Ciencia & Saude Coletiva, Vol.15
(No.3).
pp. 743-756.
ISSN 1413-8123
doi:10.1590/S1413-81232010000300017
STREAM Consortium (Including: Alam, Mohammad T., Merlo, Maria E., Hodgson, D. A., Wellington, E. M. H., Takano, Eriko and Breitling, Rainer). (2010) Metabolic modeling and analysis of the metabolic switch in Streptomyces coelicolor. BMC Genomics, Vol.11 (No.202). p. 202. doi:10.1186/1471-2164-11-202 ISSN 1471-2164.
Laskaris, Paris, Tolba, Sahar, Calvo-Bado, Leo A. and Wellington, E. M. H. (2010) Coevolution of antibiotic production and counter-resistance in soil bacteria. Environmental Microbiology, Vol.12 (No.3). pp. 783-796. doi:10.1111/j.1462-2920.2009.02125.x ISSN 1462-2912.
Nieselt, Kay, Battke, Florian, Herbig, Alexander, Bruheim, Per, Wentzel, Alexander, Jakobsen, Γyvind M., Sletta, HΓ₯vard, Alam, Mohammad T., Merlo, Maria E., Moore, Jonathan D. et al.
(2010)
The dynamic architecture of the metabolic switch in Streptomyces coelicolor.
BMC Genomics, Vol.11
(Article 10).
doi:10.1186/1471-2164-11-10
ISSN 1471-2164.
Nieselt, Kay, Battke, Florian, Herbig, Alexander, Bruheim, Per, Wentzel, Alexander, Jakobsen, Γyvind M, Sletta, HΓ₯vard, Alam, Mohammad Tauqee, Merlo, Maria E., Moore, Jonathan et al.
(2010)
The dynamic architecture of the metabolic switch in Streptomyces coelicolor.
BMC Genomics, 11
.
p. 10.
doi:DOI: 10.1186/1471-2164-11-10
ISSN 1471-2164.
2009
Boxall, Alistair B.A. , Hardy, Anthony, Beulke, Sabine, Boucard, Tatiana , Burgin, Laura, Falloon, Peter D. , Haygarth, Philip M., Hutchinson, Thomas, Kovats, R. Sari , Leonardi, Giovanni et al.
(2009)
Impacts of Climate Change on indirect human exposure to pathogens and chemicals from agriculture.
Environmental Health Perspectives, Vol.11
(No.4).
pp. 508-514.
doi:10.1289/ehp.0800084
ISSN 0091-6765.
Rossello, M. R., Griffiths, Nathan, Kalvala, Sara, Wellington, E. M. H. and Gaze, William H. (2009) Networking strategies in streptomyces coelicolor. In: 2nd International Conference on Bioinformatics and Systems Biology (BSB 2009), Leipzig, Germany, 23-25 March 2009 (Unpublished)
Byrne-Bailey, K. G., Gaze, William H., Kay, Paul, Boxall, Alistair B.A. , Hawkey, P. M. and Wellington, E. M. H. (2009) Prevalence of sulfonamide resistance genes in bacterial isolates from manured agricultural soils and pig slurry in the United Kingdom. Antimicrobial Agents and Chemotherapy, Vol.53 (No.2). pp. 696-702. doi:10.1128/AAC.00652-07 ISSN 0066-4804.
Ul-Hassan, Atiya and Wellington, E. M. H. (2009) Actinobacteria. In: Encyclopedia of Microbiology. Elsevier, pp. 25-44. ISBN 978-0-12-373944-5
2008
Courtenay, Orin and Wellington, E. M. H. (2008) Mycobacterium bovis in the environment : towards our understanding of its biology. Cattle Practice, Vol.16 (Part 2). pp. 122-126. ISSN 0969-1251.
Masciandaro, Grazia, Macci, Cristina, Doni, Serena, Maserti, Bianca Elena, Leo, A. Calvo-Bado, Ceccanti, Brunello and Wellington, E. M. H. (2008) Comparison of extraction methods for recovery of extracellular beta-glucosidase in two different forest soils. Soil Biology & Biochemistry, Vol.40 (No.9). pp. 2156-2161. doi:10.1016/j.soilbio.2008.05.001 ISSN 0038-0717.
Gaze, William H., O'Neill, Colette, Wellington, E. M. H. and Hawkey, P. M. (2008) Antibiotic resistance in the environment, with particular reference to MRSA. Advances in Applied Microbiology, Vol.63 . pp. 249-280. doi:10.1016/S0065-2164(07)00007-X ISSN 0065-2164.
2007
Courtenay, Orin, Reilly, L. A., Keeling, Matthew James, Sweeney, F. P., Wellington, E. M. H., Macdonald, David W., Delahay, Richard J., Wilson, G. J. and Cheeseman, C. L. (2007) Performance of an environmental test to detect Mycobacterium bovis infection in badger social groups. Veterinary Record, The, Vol.161 . pp. 817-818. doi:10.1136/vr.161.24.817 ISSN 0042-4900.
Sweeney, F. P., Courtenay, Orin, Hibberd, V., Hewinson, R. G., Reilly, L. A., Gaze, William H. and Wellington, E. M. H. (2007) Environmental monitoring of Mycobacterium bovis in badger feces and badger sett soil by real-time PCR, as confirmed by immunofluorescence, immunocapture, and cultivation. Applied and Environmental Microbiology, Vol.73 (No.22). pp. 7471-7473. doi:10.1128/AEM.00978-07 ISSN 0099-2240.
Edwards, L., Hicks, S., Furman, M., O'Neill, C., Wellington, E. M. H., Torrente, F., Fitzhenry, R., Phillips, A. and Murch, Simon (2007) Seg/I producing Staphylococcus aureus induces intestinal epithelial cytopathy independent of T cell responses. In: European Society for Paediatric Gastroenterology, Hepatology, and Nutrition Annual Meeting , Barcelona, Spain, May 9-12, 2007. Published in: Journal of Pediatric Gastroenterology and Nutrition, Vol.44 (Suppl.1). p. 118. doi:10.1097/01.mpg.0000269425.97715.c6 ISSN 0277-2116.
2006
Sweeney, F. P., Courtenay, Orin, Ul-Hassan, Atiya, Hibberd, V., Reilly, L. A. and Wellington, E. M. H. (2006) Immunomagnetic recovery of Mycobacterium bovis from naturally infected environmental samples. LETTERS IN APPLIED MICROBIOLOGY, 43 (4). pp. 364-369. doi:10.1111/j.1472-765X.2005.01983.x ISSN 0266-8254.
Courtenay, Orin, Reilly, L. A., Sweeney, F. P., Hibberd, V., Bryan, S., Ul-Hassan, Atiya, Newman, C., Macdonald, D. W., Delahay, R. J., Wilson, G. J. and Wellington, E. M. H. (2006) Is Mycobacterium bovis in the environment important for the persistence of bovine tuberculosis? Biology Letters, Vol.2 (No.3). pp. 460-462. doi:10.1098/rsbl.2006.0468 ISSN 1744-9561.
Krsek, Martin and Wellington, E. M. H. (2006) Studies of microbial community structure and function below ground in a managed upland grassland site at Sourhope Research Station. Applied Soil Ecology, Volume 33 (Number 2). pp. 127-136. doi:10.1016/j.aposil.2006.03.0087 ISSN 0929-1393.
This list was generated on Tue Mar 19 10:34:54 2024 GMT.