Pontiroli, Alessandra, Khera, Tanya T., Oakley, Brian B., Mason, Sam (Sam A.), Dowd, Scot E., Travis, Emma Rachel, Erenso, Girum, Aseffa, Abraham, Courtenay, Orin and Wellington, E. M. H. (Elizabeth M. H.), 1954-. (2013) Prospecting environmental mycobacteria: combined molecular approaches reveal unprecedented diversity. PLoS One, Volume 8 (Number 7). Article number e68648. ISSN 1932-6203

Gaze, William H., Krone, Stephen M., Larsson, D.G. Joakim, Li, Xian-Zhi, Robinson, Joseph A., Simonet, Pascal, Smalla, Kornelia, Timinouni, Mohammed, Topp, Ed, Wellington, Elizabeth M. H., Wright, Gerard D. and Zhu, Yong-Guan. (2013) Influence of humans on evolution and mobilization of environmental antibiotic resistome. Emerging Infectious Diseases , Volume 19 (Number 7). ISSN 1080-6059

Russell, Claire L., Smith, Edward M., Calvo-Bado, Leo A., Green, Laura E., Wellington, E. M. H. (Elizabeth M. H.), 1954-, Medley, Graham F., Moore, Lynda J. and Grogono-Thomas, Rosemary. (2013) Multiple locus VNTR analysis highlights that geographical clustering and distribution of Dichelobacter nodosus, the causal agent of footrot in sheep, correlates with inter-country movements. Infection, Genetics and Evolution . ISSN 1567-1348 (In Press)

. (2013) Meeting report : 1st international functional metagenomics workshop May 7–8, 2012, St. Jacobs, Ontario, Canada. Standards in Genomic Sciences, Volume 8 (Number 1). pp. 106-111. ISSN 1944-3277

Wellington, Elizabeth M. H., Boxall, Alistair B. A., Cross, Paul, Feil, Edward J., Gaze, William H., Hawkey, Peter M., Johnson-Rollings, Ashley S., Jones, Davey L., Lee, Nick, 1968-, Otten, Wilfred, Thomas, Christopher M. and Williams, A. Prysor. (2013) The role of the natural environment in the emergence of antibiotic resistance in Gram-negative bacteria. The Lancet Infectious Diseases, Vol.13 (No.2). pp. 155-165. ISSN 1473-3099

Laskaris, Paris, Sekine, Takuya and Wellington, E. M. H. (Elizabeth M. H.), 1954-. (2012) Diversity analysis of Streptomycetes and associated phosphotranspherase genes in soil. PLoS ONE, Vol.7 (No.4). e35756. ISSN 1932-6203

Thomas, L., Hodgson, D. A. (David A.), Wentzel, A., Nieselt, K., Ellingsen, T. E., Moore, Jonathan D., Morrissey, E. R., Legaie, Roxane, Wohlleben, W., Rodriguez-Garcia, A., Martin, J. F., Burroughs, Nigel John, Wellington, E. M. H. (Elizabeth M. H.), 1954- and Smith, M. C. M.. (2012) Metabolic switches and adaptations deduced from the proteomes of Streptomyces coelicolor wild type and phoP mutant grown in batch culture. Molecular & Cellular Proteomics, Vol.11 (No.2). M111.013797. ISSN 1535-9476

Pearce, David A., Newsham, Kevin K., Thorne, Michael A. S., Calvo-Bado, Leo A., Krsek, Martin, 1974-, Laskaris, Paris, Hodson, Andrew J. and Wellington, E. M. H. (Elizabeth M. H.), 1954- . (2012) Metagenomic analysis of a southern maritime Antarctic soil. Frontiers in Microbiology, Volume 3 . Article number 403. ISSN 1664-302X

Martín, Juan F. , Santos-Beneit, Fernando, Rodríguez-García, Antonio , Sola-Landa, Alberto , Smith, Margaret C. M., Ellingsen, Trond E., Nieselt, Kay , Burroughs, Nigel John and Wellington, E. M. H. (Elizabeth M. H.), 1954-. (2012) Transcriptomic studies of phosphate control of primary and secondary metabolism in Streptomyces coelicolor. Applied Microbiology and Biotechnology, Vol.95 (No.1). pp. 61-75. ISSN 0175-7598

Tsibidis, George D., Burroughs, Nigel John, Gaze, William H. and Wellington, E. M. H. (Elizabeth M. H.), 1954-. (2011) Semi-automated Acanthamoeba polyphaga detection and computation of Salmonella typhimurium concentration in spatio-temporal images. Micron, Vol.42 (No.8). pp. 911-920. ISSN 0968-4328

Calvo-Bado, Leo A., Oakley, Brian B., Dowd, Scot E., Green, Laura E., Medley, Graham, Ul-Hassan, Atiya, Bateman, Vicky, Gaze, William H., Witcomb, Luci, Grogono-Thomas, R., Kaler, Jasmeet, Russell, Claire L. and Wellington, E. M. H. (Elizabeth M. H.). (2011) Ovine pedomics : the first study of the ovine foot 16S rRNA-based microbiome. ISME Journal, Vol.5 (No.9). pp. 1426-1437. ISSN 1751-7362

Pontiroli, Alessandra, Travis, Emma Rachel, Sweeney, F. P., Porter, David, Gaze, William H., Mason, Sam (Sam A.), Hibberd, V. (Victoria), Holden, Jennifer, Courtenay, Orin and Wellington, E. M. H. (Elizabeth M. H.), 1954-. (2011) Pathogen quantitation in complex matrices : a multi-operator comparison of DNA extraction methods with a novel assessment of PCR inhibition. PL o S One, Vol.6 (No.3). e17916. ISSN 1932-6203

Byrne-Bailey, K. G., Gaze, William H., Zhang, L., Kay, Paul, Boxall, Alistair B.A. , Hawkey, Peter M. and Wellington, E. M. H. (Elizabeth M. H.), 1954-. (2011) Integron prevalence and diversity in manured soil. Applied and Environmental Microbiology, Vol.77 (No.2). pp. 684-687. ISSN 0099-2240

Gaze, William H., Zhang, Lihong, Abdouslam, Nouradin A, Hawkey, Peter M, Calvo-Bado, Leo, Royle, Jeremy, Brown, Helen, Davis, Susan, Kay, Paul, Boxall, Alistair B A and Wellington, Elizabeth M H. (2011) Impacts of anthropogenic activity on the ecology of class 1 integrons and integron-associated genes in the environment. ISME Journal, Vol.5 (No.8). pp. 1253-1261. ISSN 1751-7362

Anukool, Usanee, O’Neill, Colette E., Butr-Indr, Bordin, Hawkey, P. M. (Peter M.), Gaze, William H. and Wellington, E. M. H. (Elizabeth M. H.), 1954-. (2011) Meticillin-resistant Staphylococcus aureus in pigs from Thailand. International Journal of Antimicrobial Agents, Volume 38 (Number 1). pp. 86-87. ISSN 0924-8579

Gaze, William H., Morgan, Gina, Zhang, L. H. and Wellington, E. M. H. (Elizabeth M. H.), 1954-. (2011) Mimivirus-like particles in Acanthamoebae from sewage sludge. Emerging Infectious Diseases , Volume 17 (Number 6). pp. 1127-1129. ISSN 1080-6059

Travis, Emma Rachel, Gaze, William H., Pontiroli, Alessandra, Sweeney, Francis P., Porter, David, Mason, Sam (Sam A.), Keeling, Matthew James, Jones, Rebecca M., Sawyer, Jason, Aranaz, Alicia, Castellanos Rizaldos, Elena, Cork, Jennifer, Delahay, Richard J., Wilson, Gavin J., Hewinson, R. Glyn, Courtenay, Orin and Wellington, E. M. H. (Elizabeth M. H.), 1954-. (2011) An inter-laboratory validation of a real time PCR assay to measure host excretion of bacterial pathogens, particularly of mycobacterium bovis. PLoS One, Vol.6 (No.11). e27369. ISSN 1932-6203

Kaler, Jasmeet, Medley, Graham, Grogono-Thomas, R., Wellington, E. M. H. (Elizabeth M. H.), 1954-, Calvo-Bado, Leo A., Wassink, Geert J., King, E. M., Moore, L. J., Russell, Claire L. and Green, Laura E.. (2010) Factors associated with changes of state of foot conformation and lameness in a flock of sheep. Preventive Veterinary Medicine, Vol.97 (No.3/4). pp. 237-244. ISSN 0167-5877

Calvo-Bado, Leo A., Green, Laura E., Medley, Graham, Ul-Hassan, Atiya, Grogono-Thomas, R., Buller, Nicky B., Kaler, Jasmeet, Russell, Claire L., Kennan, Ruth M., Rood, Julian I. and Wellington, E. M. H. (Elizabeth M. H.), 1954-. (2010) Detection and diversity of a putative novel heterogeneous polymorphic proline-glycine repeat (Pgr) protein in the footrot pathogen Dichelobacter nodosus. Veterinary Microbiology, Vol.147 (No.3-4). pp. 358-366. ISSN 0378-1135

Laskaris, Paris, Tolba, Sahar, Calvo-Bado, Leo A. and Wellington, E. M. H. (Elizabeth M. H.) (2010) Corrigendum to "Coevolution of antibiotic production and counter-resistance in soil bacteria". Environmental Microbiology, Vol.12 (No.7). p. 2048. ISSN 1462-2912

(2010) Impacts of climate change on indirect human exposure to pathogens and chemicals from agriculture. Ciencia & Saude Coletiva, Vol.15 (No.3). pp. 743-756. ISSN 1413-8123

STREAM Consortium (Including: Alam, Mohammad T., Merlo, Maria E., Hodgson, D. A. (David A.), Wellington, E. M. H. (Elizabeth M. H.), Takano, Eriko and Breitling, Rainer). (2010) Metabolic modeling and analysis of the metabolic switch in Streptomyces coelicolor. BMC Genomics, Vol.11 (No.202). p. 202. ISSN 1471-2164

Laskaris, Paris, Tolba, Sahar, Calvo-Bado, Leo A. and Wellington, E. M. H. (Elizabeth M. H.). (2010) Coevolution of antibiotic production and counter-resistance in soil bacteria. Environmental Microbiology, Vol.12 (No.3). pp. 783-796. ISSN 1462-2912

. (2010) The dynamic architecture of the metabolic switch in Streptomyces coelicolor. BMC Genomics, Vol.11 (Article 10). ISSN 1471-2164

. (2009) Impacts of Climate Change on indirect human exposure to pathogens and chemicals from agriculture. Environmental Health Perspectives, Vol.11 (No.4). pp. 508-514. ISSN 0091-6765

(2009) Impacts of climate change on indirect human exposure to pathogens and chemicals from agriculture. Environmental Health Perspectives, Vol.117 (No.4). pp. 508-514. ISSN 0091-6765

Byrne-Bailey, K. G., Gaze, William H., Kay, Paul, Boxall, Alistair B.A. , Hawkey, Peter M. and Wellington, E. M. H. (Elizabeth M. H.), 1954-. (2009) Prevalence of sulfonamide resistance genes in bacterial isolates from manured agricultural soils and pig slurry in the United Kingdom. Antimicrobial Agents and Chemotherapy, Vol.53 (No.2). pp. 696-702. ISSN 0066-4804

Ul-Hassan, A. and Wellington, E. M. H. (Elizabeth M. H.) (2009) Actinobacteria. In: Encyclopedia of Microbiology. Elsevier, pp. 25-44. ISBN 978-0-12-373944-5

Courtenay, Orin and Wellington, E. M. H. (Elizabeth M. H.), 1954-. (2008) Mycobacterium bovis in the environment : towards our understanding of its biology. Cattle Practice, Vol.16 (Part 2). pp. 122-126. ISSN 0969-1251

Masciandaro, Grazia, Macci, Cristina, Doni, Serena, Maserti, Bianca Elena, Leo, A. Calvo-Bado, Ceccanti, Brunello and Wellington, E. M. H. (Elizabeth M. H.), 1954-. (2008) Comparison of extraction methods for recovery of extracellular beta-glucosidase in two different forest soils. Soil Biology & Biochemistry, Vol.40 (No.9). pp. 2156-2161. ISSN 0038-0717

Gaze, William H., O'Neill, Colette, Wellington, E. M. H. (Elizabeth M. H.), 1954- and Hawkey, Peter M.. (2008) Antibiotic resistance in the environment, with particular reference to MRSA. Advances in Applied Microbiology, Vol.63 . pp. 249-280. ISSN 0065-2164

Courtenay, Orin, Reilly, L. A., Keeling, Matthew James, Sweeney, F. P., Wellington, E. M. H. (Elizabeth M. H.), 1954-, Macdonald, David W. (David Whyte), Delahay, Richard J., Wilson, G. J. (Gavin J.) and Cheeseman, C. L.. (2007) Performance of an environmental test to detect Mycobacterium bovis infection in badger social groups. Veterinary Record, The, Vol.161 . pp. 817-818. ISSN 0042-4900

Sweeney, F. P., Courtenay, Orin, Hibberd, V. (Victoria), Hewinson, R. G., Reilly, L. A., Gaze, William H. and Wellington, E. M. H. (Elizabeth M. H.), 1954-. (2007) Environmental monitoring of Mycobacterium bovis in badger feces and badger sett soil by real-time PCR, as confirmed by immunofluorescence, immunocapture, and cultivation. Applied and Environmental Microbiology, Vol.73 (No.22). pp. 7471-7473. ISSN 0099-2240

Edwards, L., Hicks, S., Furman, M., O'Neill, C., Wellington, E. M. H. (Elizabeth M. H.), 1954-, Torrente, F., Fitzhenry, R., Phillips, A. and Murch, S. (2007) Seg/I producing Staphylococcus aureus induces intestinal epithelial cytopathy independent of T cell responses. In: European Society for Paediatric Gastroenterology, Hepatology, and Nutrition Annual Meeting , Barcelona, Spain, May 9-12, 2007. Published in: Journal of Pediatric Gastroenterology and Nutrition, Vol.44 (Suppl.1). p. 118.

Sweeney, F. P., Courtenay, Orin, Ul-Hassan, Atiya, Hibberd, V. (Victoria), Reilly, L. A. and Wellington, E. M. H. (Elizabeth M. H.), 1954-. (2006) Immunomagnetic recovery of Mycobacterium bovis from naturally infected environmental samples. LETTERS IN APPLIED MICROBIOLOGY, 43 (4). pp. 364-369. ISSN 0266-8254

Courtenay, Orin, Reilly, L. A., Sweeney, F. P., Hibberd, V. (Victoria), Bryan, S., Ul-Hassan, Atiya, Newman, C., Macdonald, D. W., Delahay, R. J., Wilson, G. J. and Wellington, E. M. H. (Elizabeth M. H.). (2006) Is Mycobacterium bovis in the environment important for the persistence of bovine tuberculosis? Biology Letters, Vol.2 (No.3). pp. 460-462. ISSN 1744-9561

Krsek, Martin and Wellington, E. M. H. (Elizabeth M. H.), 1954-. (2006) Studies of microbial community structure and function below ground in a managed upland grassland site at Sourhope Research Station. Applied Soil Ecology, Volume 33 (Number 2). pp. 127-136. ISSN 0929-1393