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Jump to: BQR-Lorraine region | BQR-Nancy University | Biotechnology and Biological Sciences Research Council (Great Britain) (BBSRC) | Centre for Ecology and Hydrology (Great Britain) (CEH) | Centre for Ecology and Hydrology Q1 Carbon Catchment Research Programme | China Scholarship Council (CSC) | China. Guo jia ke xue ji shu bu [Ministry of Science and Technology] (CMST) | Dorothy Hodgkin Postgraduate Award | Dorothy Hodgkin Postgraduate Award, University of Warwick | Earth & Life Systems Alliance (ELSA) | Engineering and Physical Sciences Research Council (EPSRC) | European Union (EU) | FR-EST | Fonds zur Förderung der Wissenschaftlichen Forschung (Austria) (FWF) | GISFI | Gordon and Betty Moore Foundation (GBMF) | Grant of NSF Key Projects of China | Guo jia zi ran ke xue ji jin wei yuan hui (China) [National Natural Science Foundation of China] (NSFC) | Guójiā gāo jìshù yánjiū fāzhǎn jìhuà (China) [National High Technology Research Development Program] (NHTRDP) | Lawrence Berkeley National Laboratory | Leverhulme Trust (LT) | Los Alamos National Laboratory | Ministry of Science and Technology of China | NERC | NERC International Opportunities Fund of the M&FMB Thematic Programme | NERC, Dorothy Hodgkin Postgraduate Award through the University of Warwick | National High Technology Research and Development Program (863 Program) of China | National Natural Science foundation of China | Natural Environment Research Council (Great Britain) (NERC) | Natural Environment Research Council (Great Britain) (NERC) | Natural Environment Research Council (U.K.) | Natural Sciences and Engineering Research Council Canada (NSERC) | PetroChina Foundation | Royal Society (Great Britain) | Seventh Framework Programme (European Commission) (FP7) | Society for General Microbiology | Spain | This work was supported by the Natural Environment Research Council (NERC), UK, through research grants (NE/I027061/1 and NE/I025077/1) and a Ph.D. studentship to H.J. and a Warwick Integrative Synthetic Biology (WISB) early career fellowship, funded join | U.S. Department of Energy's Office of Science, Biological and Environmental Research Program | University of California | University of East Anglia | University of Warwick | University of Warwick Postgraduate Research Scholarship | Wellcome Trust (London, England) | Zhongguo ke xue yuan [Chinese Academy of Sciences] (CAS) | Zhōnghuá rénmín gònghéguó rénlì zīyuán hé shèhuì bǎozhàng bù (China) [Ministry of Human Resources and Social Security of the People 's Republic of China] (MOHRSS)
Number of items: 71.
BQR-Lorraine region
Cébron, Aurélie, Louvel, Brice, Faure, Pierre, France-Lanord, Christian, Chen, Yin, Murrell, J. C. (J. Colin) and Leyval, Corinne (2010) Root exudates modify bacterial diversity of phenanthrene degraders in PAH-polluted soil but not phenanthrene degradation rates. Environmental Microbiology, Vol.13 (No.3). pp. 722-736. doi:10.1111/j.1462-2920.2010.02376.x ISSN 1462-2912.
BQR-Nancy University
Cébron, Aurélie, Louvel, Brice, Faure, Pierre, France-Lanord, Christian, Chen, Yin, Murrell, J. C. (J. Colin) and Leyval, Corinne (2010) Root exudates modify bacterial diversity of phenanthrene degraders in PAH-polluted soil but not phenanthrene degradation rates. Environmental Microbiology, Vol.13 (No.3). pp. 722-736. doi:10.1111/j.1462-2920.2010.02376.x ISSN 1462-2912.
Biotechnology and Biological Sciences Research Council (Great Britain) (BBSRC)
Zhu, Yijun , Jameson, Eleanor, Parslow, Rosemary A., Lidbury, Ian, Fu, Tiantian, Dafforn, Tim, Schäfer, Hendrik and Chen, Yin (2014) Identification and characterization of trimethylamine N-oxide (TMAO) demethylase and TMAO permease in Methylocella silvestris BL2. Environmental Microbiology, 16 (10). pp. 3318-3330. doi:10.1111/1462-2920.12585 ISSN 1462-2912.
Wang, Yun, Chen, Yin, Zhou, Qian, Huang, Shi, Ning, Kang, Xu, Jian, Kalin, Robert M., Rolfe, Stephen A. and Huang, Wei E. (2012) A culture-independent approach to unravel uncultured bacteria and functional genes in a complex microbial community. PLoS One, Vol.7 (No.10). e47530. doi:10.1371/journal.pone.0047530 ISSN 1932-6203.
Centre for Ecology and Hydrology (Great Britain) (CEH)
Chen, Y. (Yin), Dumont, Marc G., McNamara, Niall P., Chamberlain, P. M. (Paul M.), Bodrossy, Levente, Stralis-Pavese, Nancy and Murrell, J. C. (J. Colin) (2008) Diversity of the active methanotrophic community in acidic peatlands as assessed by mRNA and SIP-PLFA analyses. Environmental Microbiology, Vol.10 (No.2). pp. 446-459. doi:10.1111/j.1462-2920.2007.01466.x ISSN 1462-2912.
Centre for Ecology and Hydrology Q1 Carbon Catchment Research Programme
Chen, Yin, McNamara, Niall P., Dumont, Marc G., Bodrossy, Levente, Stralis-Pauese, Nancy and Murrell, J. C. (J. Colin) (2008) The impact of burning and Calluna removal on below-ground methanotroph diversity and activity in a peatland soil. Applied Soil Ecology, Vol.40 (No.2). pp. 291-298. doi:10.1016/j.apsoil.2008.05.008 ISSN 0929-1393.
China Scholarship Council (CSC)
Wang, Yun, Chen, Yin, Zhou, Qian, Huang, Shi, Ning, Kang, Xu, Jian, Kalin, Robert M., Rolfe, Stephen A. and Huang, Wei E. (2012) A culture-independent approach to unravel uncultured bacteria and functional genes in a complex microbial community. PLoS One, Vol.7 (No.10). e47530. doi:10.1371/journal.pone.0047530 ISSN 1932-6203.
China. Guo jia ke xue ji shu bu [Ministry of Science and Technology] (CMST)
Zhang, Dayi, Berry, James, Zhu, Di, Wang, Yun, Chen, Yin, Jiang, Bo, Huang, Shi, Langford, Harry, Li, Guanghe, Davison, Paul A., Xu, Jian, Aries, Eriv and Huang, Wei E. (2015) Magnetic nanoparticle-mediated isolation of functional bacteria in a complex microbial community. ISME Journal, 9 . pp. 603-614. doi:10.1038/ismej.2014.161 ISSN 1751-7362.
Dorothy Hodgkin Postgraduate Award
Chen, Yin, McNamara, Niall P., Dumont, Marc G., Bodrossy, Levente, Stralis-Pauese, Nancy and Murrell, J. C. (J. Colin) (2008) The impact of burning and Calluna removal on below-ground methanotroph diversity and activity in a peatland soil. Applied Soil Ecology, Vol.40 (No.2). pp. 291-298. doi:10.1016/j.apsoil.2008.05.008 ISSN 0929-1393.
Dorothy Hodgkin Postgraduate Award, University of Warwick
Chen, Yin, Wu, Liqin, Boden, Rich, Hillebrand, Alexandra, Kumaresan, Deepak, Moussard, Helene, Baciu, Mihai, Lu, Yahai and Murrell, J. C. (J. Colin) (2009) Life without light: microbial diversity and evidence of sulfur- and ammonium-based chemolithotrophy in Movile Cave. ISME Journal, Vol.3 (No.9). pp. 1093-1104. doi:10.1038/ismej.2009.57 ISSN 1751-7362.
Earth & Life Systems Alliance (ELSA)
Grob, Carolina, Taubert, Martin, Howat, Alexandra M., Burns, Oliver J., Dixon, Joanna L., Richnow, Hans H., Jehmlich, Nico, von Bergen, Martin, Chen, Yin and Murrell, J. C. (J. Colin) (2015) Combining metagenomics with metaproteomics and stable isotope probing reveals metabolic pathways used by a naturally occurring marine methylotroph. Environmental Microbiology, 17 (10). pp. 4007-4018. doi:10.1111/1462-2920.12935 ISSN 1462-2912.
Taubert, Martin, Grob, Carolina, Howat, Alexandra M., Burns, Oliver J., Dixon, Joanna L., Chen, Yin and Murrell, J. C. (J. Colin) (2015) XoxFencoding an alternative methanol dehydrogenase is widespread in coastal marine environments. Environmental Microbiology, 17 (10). pp. 3937-3948. doi:10.1111/1462-2920.12896 ISSN 1462-2912.
Engineering and Physical Sciences Research Council (EPSRC)
Zhang, Dayi, Berry, James, Zhu, Di, Wang, Yun, Chen, Yin, Jiang, Bo, Huang, Shi, Langford, Harry, Li, Guanghe, Davison, Paul A., Xu, Jian, Aries, Eriv and Huang, Wei E. (2015) Magnetic nanoparticle-mediated isolation of functional bacteria in a complex microbial community. ISME Journal, 9 . pp. 603-614. doi:10.1038/ismej.2014.161 ISSN 1751-7362.
European Union (EU)
Zhang, Dayi, Berry, James, Zhu, Di, Wang, Yun, Chen, Yin, Jiang, Bo, Huang, Shi, Langford, Harry, Li, Guanghe, Davison, Paul A., Xu, Jian, Aries, Eriv and Huang, Wei E. (2015) Magnetic nanoparticle-mediated isolation of functional bacteria in a complex microbial community. ISME Journal, 9 . pp. 603-614. doi:10.1038/ismej.2014.161 ISSN 1751-7362.
FR-EST
Cébron, Aurélie, Louvel, Brice, Faure, Pierre, France-Lanord, Christian, Chen, Yin, Murrell, J. C. (J. Colin) and Leyval, Corinne (2010) Root exudates modify bacterial diversity of phenanthrene degraders in PAH-polluted soil but not phenanthrene degradation rates. Environmental Microbiology, Vol.13 (No.3). pp. 722-736. doi:10.1111/j.1462-2920.2010.02376.x ISSN 1462-2912.
Fonds zur Förderung der Wissenschaftlichen Forschung (Austria) (FWF)
Chen, Y. (Yin), Dumont, Marc G., McNamara, Niall P., Chamberlain, P. M. (Paul M.), Bodrossy, Levente, Stralis-Pavese, Nancy and Murrell, J. C. (J. Colin) (2008) Diversity of the active methanotrophic community in acidic peatlands as assessed by mRNA and SIP-PLFA analyses. Environmental Microbiology, Vol.10 (No.2). pp. 446-459. doi:10.1111/j.1462-2920.2007.01466.x ISSN 1462-2912.
GISFI
Cébron, Aurélie, Louvel, Brice, Faure, Pierre, France-Lanord, Christian, Chen, Yin, Murrell, J. C. (J. Colin) and Leyval, Corinne (2010) Root exudates modify bacterial diversity of phenanthrene degraders in PAH-polluted soil but not phenanthrene degradation rates. Environmental Microbiology, Vol.13 (No.3). pp. 722-736. doi:10.1111/j.1462-2920.2010.02376.x ISSN 1462-2912.
Gordon and Betty Moore Foundation (GBMF)
Grob, Carolina, Taubert, Martin, Howat, Alexandra M., Burns, Oliver J., Dixon, Joanna L., Richnow, Hans H., Jehmlich, Nico, von Bergen, Martin, Chen, Yin and Murrell, J. C. (J. Colin) (2015) Combining metagenomics with metaproteomics and stable isotope probing reveals metabolic pathways used by a naturally occurring marine methylotroph. Environmental Microbiology, 17 (10). pp. 4007-4018. doi:10.1111/1462-2920.12935 ISSN 1462-2912.
Taubert, Martin, Grob, Carolina, Howat, Alexandra M., Burns, Oliver J., Dixon, Joanna L., Chen, Yin and Murrell, J. C. (J. Colin) (2015) XoxFencoding an alternative methanol dehydrogenase is widespread in coastal marine environments. Environmental Microbiology, 17 (10). pp. 3937-3948. doi:10.1111/1462-2920.12896 ISSN 1462-2912.
Zhang, Dayi, Berry, James, Zhu, Di, Wang, Yun, Chen, Yin, Jiang, Bo, Huang, Shi, Langford, Harry, Li, Guanghe, Davison, Paul A., Xu, Jian, Aries, Eriv and Huang, Wei E. (2015) Magnetic nanoparticle-mediated isolation of functional bacteria in a complex microbial community. ISME Journal, 9 . pp. 603-614. doi:10.1038/ismej.2014.161 ISSN 1751-7362.
Grant of NSF Key Projects of China
Ye, Fengchun, Kuang, Ying, Chen, Shuo, Zhang, Chong, Chen, Yin and Xing, Xin-Hui (2009) Characteristics of low molecular weight heparin production by an ultrafiltration membrane bioreactor using maltose binding protein fused heparinase I. Biochemical Engineering Journal, Vol.46 (No.2). pp. 193-198. doi:10.1016/j.bej.2009.05.007 ISSN 1369-703X.
Guo jia zi ran ke xue ji jin wei yuan hui (China) [National Natural Science Foundation of China] (NSFC)
Li, Chun-Yang, Chen, Xiu-Lan, Zhang, Dian, Wang, Peng, Sheng, Qi, Peng, Ming, Xie, Bin-Bin, Qin, Qi-Long, Li, Ping-Yi, Zhang, Xi-Ying, Su, Hai-Nan, Song, Xiao-Yan, Shi, Mei, Zhou, Bai-Cheng, Xun, Lu-Ying, Chen, Yin and Zhang, Yu-Zhong (2017) Structural mechanism for bacterial oxidation of oceanic trimethylamine into trimethylamine N -oxide. Molecular Microbiology, 103 (6). pp. 992-1003. doi:10.1111/mmi.13605 ISSN 0950-382X.
Guójiā gāo jìshù yánjiū fāzhǎn jìhuà (China) [National High Technology Research Development Program] (NHTRDP)
Li, Chun-Yang, Chen, Xiu-Lan, Zhang, Dian, Wang, Peng, Sheng, Qi, Peng, Ming, Xie, Bin-Bin, Qin, Qi-Long, Li, Ping-Yi, Zhang, Xi-Ying, Su, Hai-Nan, Song, Xiao-Yan, Shi, Mei, Zhou, Bai-Cheng, Xun, Lu-Ying, Chen, Yin and Zhang, Yu-Zhong (2017) Structural mechanism for bacterial oxidation of oceanic trimethylamine into trimethylamine N -oxide. Molecular Microbiology, 103 (6). pp. 992-1003. doi:10.1111/mmi.13605 ISSN 0950-382X.
Lawrence Berkeley National Laboratory
Chen, Yin, Crombie, Andrew, Rahman, M. Tanvir, Dedysh, Svetlana N., Liesack, Werner, Stott, Matthew B., Alam, Maqsudul, Theisen, Andreas R., Murrell, J. C. (J. Colin) and Dunfield, Peter F. (2010) Complete genome sequence of the aerobic facultative methanotroph Methylocella silvestris BL2. Journal of Bacteriology, Vol.192 (No.14). pp. 3840-3841. doi:10.1128/JB.00506-10 ISSN 0021-9193.
Leverhulme Trust (LT)
Jameson, Eleanor, Fu, Tiantian, Brown, Ian R., Paszkiewicz, Konrad, Purdy, Kevin J., Frank, Stefanie and Chen, Yin (2015) Anaerobic choline metabolism in microcompartments promotes growth and swarming of Proteus mirabilis. Environmental Microbiology, 18 . pp. 2886-2898. doi:10.1111/1462-2920.13059 ISSN 1462-2912.
Los Alamos National Laboratory
Chen, Yin, Crombie, Andrew, Rahman, M. Tanvir, Dedysh, Svetlana N., Liesack, Werner, Stott, Matthew B., Alam, Maqsudul, Theisen, Andreas R., Murrell, J. C. (J. Colin) and Dunfield, Peter F. (2010) Complete genome sequence of the aerobic facultative methanotroph Methylocella silvestris BL2. Journal of Bacteriology, Vol.192 (No.14). pp. 3840-3841. doi:10.1128/JB.00506-10 ISSN 0021-9193.
Ministry of Science and Technology of China
Han, Bing, Su, Tao, Wu, Hao, Gou, Zhongxuan, Xing, Xin-Hui, Jiang, Hao, Chen, Yin, Li, Xin and Murrell, J. C. (J. Colin) (2009) Paraffin oil as a "methane vector" for rapid and high cell density cultivation of Methylosinus trichosporium OB3b. Applied Microbiology and Biotechnology, Vol.83 (No.4). pp. 669-677. doi:10.1007/s00253-009-1866-2 ISSN 0175-7598.
NERC
Chen, Yin, Scanlan, Julie, Song, Lijiang, Crombie, Andrew, Rahman, M. Tanvir, Schäfer, Hendrik and Murrell, J. C. (J. Colin) (2010) Gamma-Glutamylmethylamide Is an Essential Intermediate in the Metabolism of Methylamine by Methylocella silvestris. Applied and Environmental Microbiology, Vol.76 (No.13). pp. 4530-4537. doi:10.1128/AEM.00739-10 ISSN 0099-2240.
NERC International Opportunities Fund of the M&FMB Thematic Programme
Han, Bing, Chen, Yin, Abell, Guy, Jiang, Hao, Bodrossy, Levente, Zhao, Jiangang, Murrell, J. C. (J. Colin) and Xing, Xin-Hui (2009) Diversity and activity of methanotrophs in alkaline soil from a Chinese coal mine. FEMS Microbiology Ecology, Vol.70 (No.2 Sp. Iss. SI). pp. 196-207. doi:10.1111/j.1574-6941.2009.00707.x ISSN 0168-6496.
NERC, Dorothy Hodgkin Postgraduate Award through the University of Warwick
Han, Bing, Chen, Yin, Abell, Guy, Jiang, Hao, Bodrossy, Levente, Zhao, Jiangang, Murrell, J. C. (J. Colin) and Xing, Xin-Hui (2009) Diversity and activity of methanotrophs in alkaline soil from a Chinese coal mine. FEMS Microbiology Ecology, Vol.70 (No.2 Sp. Iss. SI). pp. 196-207. doi:10.1111/j.1574-6941.2009.00707.x ISSN 0168-6496.
National High Technology Research and Development Program (863 Program) of China
Jiang, Hao, Chen, Yin, Jiang, Peixia, Zhang, Chong, Smith, Thomas J., Murrell, J. C. (J. Colin) and Xing, Xin-Hui (2010) Methanotrophs: multifunctional bacteria with promising applications in environmental bioengineering. Biochemical Engineering Journal, Vol.49 (No.3). pp. 277-288. ISSN 1369-703X doi:10.1016/j.bej.2010.01.003
Han, Bing, Chen, Yin, Abell, Guy, Jiang, Hao, Bodrossy, Levente, Zhao, Jiangang, Murrell, J. C. (J. Colin) and Xing, Xin-Hui (2009) Diversity and activity of methanotrophs in alkaline soil from a Chinese coal mine. FEMS Microbiology Ecology, Vol.70 (No.2 Sp. Iss. SI). pp. 196-207. doi:10.1111/j.1574-6941.2009.00707.x ISSN 0168-6496.
National Natural Science foundation of China
Han, Bing, Su, Tao, Wu, Hao, Gou, Zhongxuan, Xing, Xin-Hui, Jiang, Hao, Chen, Yin, Li, Xin and Murrell, J. C. (J. Colin) (2009) Paraffin oil as a "methane vector" for rapid and high cell density cultivation of Methylosinus trichosporium OB3b. Applied Microbiology and Biotechnology, Vol.83 (No.4). pp. 669-677. doi:10.1007/s00253-009-1866-2 ISSN 0175-7598.
Natural Environment Research Council (Great Britain) (NERC)
Lidbury, Ian, Mausz, Michaela A., Scanlan, David J. and Chen, Yin (2017) Identification of dimethylamine monooxygenase in marine bacteria reveals a metabolic bottleneck in the methylated amine degradation pathway. ISME Journal, 11 . pp. 1592-1601. doi:10.1038/ismej.2017.31 ISSN 1751-7362.
Sebastián, Marta, Smith, Alastair F., González, José M., Fredricks, Helen F., Van Mooy, Benjamin, Koblížek, Michal, Brandsma, Joost, Koster, Grielof, Mestre, Mireia, Mostajir, Behzad, Pitta, Paraskevi, Postle, Anthony D., Sánchez, Pablo, Gasol, Josep M., Scanlan, David J. and Chen, Yin (2016) Lipid remodelling is a widespread strategy in marine heterotrophic bacteria upon phosphorus deficiency. The ISME Journal, 10 (4). pp. 968-978. doi:10.1038/ismej.2015.172 ISSN 1751-7362.
Lidbury, Ian, Kimberley, George, Scanlan, David J., Murrell, J. C. (J. Colin) and Chen, Yin (2015) Comparative genomics and mutagenesis analyses of choline metabolism in the marine Roseobacter clade. Environmental Microbiology, 17 (12). pp. 5048-5062. doi:10.1111/1462-2920.12943 ISSN 1462-2912.
Jameson, Eleanor, Fu, Tiantian, Brown, Ian R., Paszkiewicz, Konrad, Purdy, Kevin J., Frank, Stefanie and Chen, Yin (2015) Anaerobic choline metabolism in microcompartments promotes growth and swarming of Proteus mirabilis. Environmental Microbiology, 18 . pp. 2886-2898. doi:10.1111/1462-2920.13059 ISSN 1462-2912.
Eyice, Özge, Namura, Motonobu, Chen, Yin, Mead, A. (Andrew), Samavedam, Siva and Schäfer, Hendrik (2015) SIP metagenomics identifies uncultivated Methylophilaceae as dimethylsulphide degrading bacteria in soil and lake sediment. The ISME Journal, 9 . pp. 2336-2348. doi:10.1038/ismej.2015.37 ISSN 1751-7362.
Zhang, Dayi, Berry, James, Zhu, Di, Wang, Yun, Chen, Yin, Jiang, Bo, Huang, Shi, Langford, Harry, Li, Guanghe, Davison, Paul A., Xu, Jian, Aries, Eriv and Huang, Wei E. (2015) Magnetic nanoparticle-mediated isolation of functional bacteria in a complex microbial community. ISME Journal, 9 . pp. 603-614. doi:10.1038/ismej.2014.161 ISSN 1751-7362.
Lidbury, Ian, Murrell, J. C. (J. Colin) and Chen, Yin (2015) Trimethylamine and trimethylamine N-oxide are supplementary energy sources for a marine heterotrophic bacterium : implications for marine carbon and nitrogen cycling. The ISME Journal, 9 . pp. 760-769. doi:10.1038/ismej.2014.149 ISSN 1751-7362.
Wischer, Daniela, Kumaresan, Deepak, Johnston, Antonia, El Khawand, Myriam, Stephenson, Jason, Hillebrand-Voiculescu, Alexandra M., Chen, Yin and Murrell, J. C. (J. Colin) (2015) Bacterial metabolism of methylated amines and identification of novel methylotrophs in Movile Cave. The ISME Journal, 9 . pp. 195-206. doi:10.1038/ismej.2014.102 ISSN 1751-7362.
Zhu, Yijun , Jameson, Eleanor, Parslow, Rosemary A., Lidbury, Ian, Fu, Tiantian, Dafforn, Tim, Schäfer, Hendrik and Chen, Yin (2014) Identification and characterization of trimethylamine N-oxide (TMAO) demethylase and TMAO permease in Methylocella silvestris BL2. Environmental Microbiology, 16 (10). pp. 3318-3330. doi:10.1111/1462-2920.12585 ISSN 1462-2912.
Zhu, Yijun , Jameson, Eleanor, Cosatti, Marialuisa , Schäfer, Hendrik, Rajakumar, Kumar , Bugg, Tim and Chen, Yin (2014) Carnitine metabolism to trimethylamine by an unusual Rieske-type oxygenase from human microbiota. Proceedings of the National Academy of Sciences of the United States of America, 111 (11). pp. 4268-4273. doi:10.1073/pnas.1316569111 ISSN 0027-8424.
Lidbury, Ian, Murrell, J. C. (J. Colin) and Chen, Yin (2014) Trimethylamine N-oxide metabolism by abundant marine heterotrophic bacteria. Proceedings of the National Academy of Sciences of the United States of America, Volume 111 (Number 7). pp. 2710-2715. doi:10.1073/pnas.1317834111 ISSN 0027-8424.
Chen, Yin, Patel, Nisha A., Crombie, Andrew, Scrivens, James H. and Murrell, J. C. (J. Colin) (2011) Bacterial flavin-containing monooxygenase is trimethylamine monooxygenase. Proceedings of the National Academy of Sciences, Vol.108 (No.43). pp. 17791-17796. doi:10.1073/pnas.1112928108 ISSN 0027-8424.
Rahman, M. Tanvir, Crombie, Andrew, Moussard, Hélène, Chen, Y. (Yin) and Murrell, J. C. (J. Colin) (2011) Acetate repression of methane oxidation by supplemental methylocella silvestris in a peat soil microcosm. Applied and Environmental Microbiology, Volume 77 (Number 12). pp. 4234-4236. doi:10.1128/AEM.02902-10 ISSN 0099-2240.
Chen, Yin, Dumont, Marc G., Neufeld, Josh D., Bodrossy, Levente, Stralis-Pavese, Nancy, McNamara, Niall P., Ostle, Nick, Briones, Maria J. I. and Murrell, J. C. (J. Colin) (2008) Revealing the uncultivated majority: combining DNA stable-isotope probing, multiple displacement amplification and metagenomic analyses of uncultivated Methylocystis in acidic peatlands. Environmental Microbiology, Vol.10 (No.10). pp. 2609-2622. doi:10.1111/j.1462-2920.2008.01683.x ISSN 1462-2912.
Neufeld, Josh D., Chen, Yin, Dumont, Marc G. and Murrell, J. C. (J. Colin) (2008) Marine methylotrophs revealed by stable-isotope probing, multiple displacement amplification and metagenomics. Environmental Microbiology, Vol.10 (No.6). pp. 1526-1535. doi:10.1111/j.1462-2920.2008.01568.x ISSN 14622912.
Chen, Y. (Yin), Dumont, Marc G., McNamara, Niall P., Chamberlain, P. M. (Paul M.), Bodrossy, Levente, Stralis-Pavese, Nancy and Murrell, J. C. (J. Colin) (2008) Diversity of the active methanotrophic community in acidic peatlands as assessed by mRNA and SIP-PLFA analyses. Environmental Microbiology, Vol.10 (No.2). pp. 446-459. doi:10.1111/j.1462-2920.2007.01466.x ISSN 1462-2912.
Natural Environment Research Council (Great Britain) (NERC)
Chen, Yin, Wu, Liqin, Boden, Rich, Hillebrand, Alexandra, Kumaresan, Deepak, Moussard, Helene, Baciu, Mihai, Lu, Yahai and Murrell, J. C. (J. Colin) (2009) Life without light: microbial diversity and evidence of sulfur- and ammonium-based chemolithotrophy in Movile Cave. ISME Journal, Vol.3 (No.9). pp. 1093-1104. doi:10.1038/ismej.2009.57 ISSN 1751-7362.
Natural Environment Research Council (U.K.)
Chen, Yin and Murrell, J. C. (J. Colin) (2010) When metagenomics meets stable-isotope probing: progress and perspectives. Trends in Microbiology, Vol.18 (No.4). pp. 157-163. ISSN 0966-842X doi:10.1016/j.tim.2010.02.002
Natural Sciences and Engineering Research Council Canada (NSERC)
Neufeld, Josh D., Chen, Yin, Dumont, Marc G. and Murrell, J. C. (J. Colin) (2008) Marine methylotrophs revealed by stable-isotope probing, multiple displacement amplification and metagenomics. Environmental Microbiology, Vol.10 (No.6). pp. 1526-1535. doi:10.1111/j.1462-2920.2008.01568.x ISSN 14622912.
PetroChina Foundation
Han, Bing, Su, Tao, Wu, Hao, Gou, Zhongxuan, Xing, Xin-Hui, Jiang, Hao, Chen, Yin, Li, Xin and Murrell, J. C. (J. Colin) (2009) Paraffin oil as a "methane vector" for rapid and high cell density cultivation of Methylosinus trichosporium OB3b. Applied Microbiology and Biotechnology, Vol.83 (No.4). pp. 669-677. doi:10.1007/s00253-009-1866-2 ISSN 0175-7598.
Royal Society (Great Britain)
Zhu, Yijun , Jameson, Eleanor, Cosatti, Marialuisa , Schäfer, Hendrik, Rajakumar, Kumar , Bugg, Tim and Chen, Yin (2014) Carnitine metabolism to trimethylamine by an unusual Rieske-type oxygenase from human microbiota. Proceedings of the National Academy of Sciences of the United States of America, 111 (11). pp. 4268-4273. doi:10.1073/pnas.1316569111 ISSN 0027-8424.
Seventh Framework Programme (European Commission) (FP7)
Sebastián, Marta, Smith, Alastair F., González, José M., Fredricks, Helen F., Van Mooy, Benjamin, Koblížek, Michal, Brandsma, Joost, Koster, Grielof, Mestre, Mireia, Mostajir, Behzad, Pitta, Paraskevi, Postle, Anthony D., Sánchez, Pablo, Gasol, Josep M., Scanlan, David J. and Chen, Yin (2016) Lipid remodelling is a widespread strategy in marine heterotrophic bacteria upon phosphorus deficiency. The ISME Journal, 10 (4). pp. 968-978. doi:10.1038/ismej.2015.172 ISSN 1751-7362.
Society for General Microbiology
Chen, Yin, McAleer, Kathryn L. and Murrell, J. C. (J. Colin) (2010) Monomethylamine as a nitrogen source for a nonmethylotrophic bacterium, Agrobacterium tumefaciens. Applied and Environmental Microbiology, Vol.76 (No.12). pp. 4102-4104. doi:10.1128/AEM.00469-10 ISSN 0099-2240.
Spain
Sebastián, Marta, Smith, Alastair F., González, José M., Fredricks, Helen F., Van Mooy, Benjamin, Koblížek, Michal, Brandsma, Joost, Koster, Grielof, Mestre, Mireia, Mostajir, Behzad, Pitta, Paraskevi, Postle, Anthony D., Sánchez, Pablo, Gasol, Josep M., Scanlan, David J. and Chen, Yin (2016) Lipid remodelling is a widespread strategy in marine heterotrophic bacteria upon phosphorus deficiency. The ISME Journal, 10 (4). pp. 968-978. doi:10.1038/ismej.2015.172 ISSN 1751-7362.
This work was supported by the Natural Environment Research Council (NERC), UK, through research grants (NE/I027061/1 and NE/I025077/1) and a Ph.D. studentship to H.J. and a Warwick Integrative Synthetic Biology (WISB) early career fellowship, funded join
Jameson, Eleanor, Stephenson, Jason, Jones, Helen J., Millard, Andrew D., Kaster, K., Purdy, Kevin J., Airs, R., Murrell, J. C. (J. Colin) and Chen, Yin (2019) Deltaproteobacteria (Pelobacter) and Methanococcoides are responsible for choline-dependent methanogenesis in a coastal saltmarsh sediment. ISME Journal, 13 (2). pp. 277-289. doi:10.1038/s41396-018-0269-8 ISSN 1751-7362.
U.S. Department of Energy's Office of Science, Biological and Environmental Research Program
Chen, Yin, Crombie, Andrew, Rahman, M. Tanvir, Dedysh, Svetlana N., Liesack, Werner, Stott, Matthew B., Alam, Maqsudul, Theisen, Andreas R., Murrell, J. C. (J. Colin) and Dunfield, Peter F. (2010) Complete genome sequence of the aerobic facultative methanotroph Methylocella silvestris BL2. Journal of Bacteriology, Vol.192 (No.14). pp. 3840-3841. doi:10.1128/JB.00506-10 ISSN 0021-9193.
University of California
Chen, Yin, Crombie, Andrew, Rahman, M. Tanvir, Dedysh, Svetlana N., Liesack, Werner, Stott, Matthew B., Alam, Maqsudul, Theisen, Andreas R., Murrell, J. C. (J. Colin) and Dunfield, Peter F. (2010) Complete genome sequence of the aerobic facultative methanotroph Methylocella silvestris BL2. Journal of Bacteriology, Vol.192 (No.14). pp. 3840-3841. doi:10.1128/JB.00506-10 ISSN 0021-9193.
University of East Anglia
Wischer, Daniela, Kumaresan, Deepak, Johnston, Antonia, El Khawand, Myriam, Stephenson, Jason, Hillebrand-Voiculescu, Alexandra M., Chen, Yin and Murrell, J. C. (J. Colin) (2015) Bacterial metabolism of methylated amines and identification of novel methylotrophs in Movile Cave. The ISME Journal, 9 . pp. 195-206. doi:10.1038/ismej.2014.102 ISSN 1751-7362.
University of Warwick
Lidbury, Ian, Kimberley, George, Scanlan, David J., Murrell, J. C. (J. Colin) and Chen, Yin (2015) Comparative genomics and mutagenesis analyses of choline metabolism in the marine Roseobacter clade. Environmental Microbiology, 17 (12). pp. 5048-5062. doi:10.1111/1462-2920.12943 ISSN 1462-2912.
Wischer, Daniela, Kumaresan, Deepak, Johnston, Antonia, El Khawand, Myriam, Stephenson, Jason, Hillebrand-Voiculescu, Alexandra M., Chen, Yin and Murrell, J. C. (J. Colin) (2015) Bacterial metabolism of methylated amines and identification of novel methylotrophs in Movile Cave. The ISME Journal, 9 . pp. 195-206. doi:10.1038/ismej.2014.102 ISSN 1751-7362.
Zhu, Yijun , Jameson, Eleanor, Parslow, Rosemary A., Lidbury, Ian, Fu, Tiantian, Dafforn, Tim, Schäfer, Hendrik and Chen, Yin (2014) Identification and characterization of trimethylamine N-oxide (TMAO) demethylase and TMAO permease in Methylocella silvestris BL2. Environmental Microbiology, 16 (10). pp. 3318-3330. doi:10.1111/1462-2920.12585 ISSN 1462-2912.
Rahman, M. Tanvir, Crombie, Andrew, Moussard, Hélène, Chen, Y. (Yin) and Murrell, J. C. (J. Colin) (2011) Acetate repression of methane oxidation by supplemental methylocella silvestris in a peat soil microcosm. Applied and Environmental Microbiology, Volume 77 (Number 12). pp. 4234-4236. doi:10.1128/AEM.02902-10 ISSN 0099-2240.
Chen, Y. (Yin), Dumont, Marc G., McNamara, Niall P., Chamberlain, P. M. (Paul M.), Bodrossy, Levente, Stralis-Pavese, Nancy and Murrell, J. C. (J. Colin) (2008) Diversity of the active methanotrophic community in acidic peatlands as assessed by mRNA and SIP-PLFA analyses. Environmental Microbiology, Vol.10 (No.2). pp. 446-459. doi:10.1111/j.1462-2920.2007.01466.x ISSN 1462-2912.
University of Warwick Postgraduate Research Scholarship
Eyice, Özge, Namura, Motonobu, Chen, Yin, Mead, A. (Andrew), Samavedam, Siva and Schäfer, Hendrik (2015) SIP metagenomics identifies uncultivated Methylophilaceae as dimethylsulphide degrading bacteria in soil and lake sediment. The ISME Journal, 9 . pp. 2336-2348. doi:10.1038/ismej.2015.37 ISSN 1751-7362.
Wellcome Trust (London, England)
Jameson, Eleanor, Fu, Tiantian, Brown, Ian R., Paszkiewicz, Konrad, Purdy, Kevin J., Frank, Stefanie and Chen, Yin (2015) Anaerobic choline metabolism in microcompartments promotes growth and swarming of Proteus mirabilis. Environmental Microbiology, 18 . pp. 2886-2898. doi:10.1111/1462-2920.13059 ISSN 1462-2912.
Zhongguo ke xue yuan [Chinese Academy of Sciences] (CAS)
Li, Chun-Yang, Chen, Xiu-Lan, Zhang, Dian, Wang, Peng, Sheng, Qi, Peng, Ming, Xie, Bin-Bin, Qin, Qi-Long, Li, Ping-Yi, Zhang, Xi-Ying, Su, Hai-Nan, Song, Xiao-Yan, Shi, Mei, Zhou, Bai-Cheng, Xun, Lu-Ying, Chen, Yin and Zhang, Yu-Zhong (2017) Structural mechanism for bacterial oxidation of oceanic trimethylamine into trimethylamine N -oxide. Molecular Microbiology, 103 (6). pp. 992-1003. doi:10.1111/mmi.13605 ISSN 0950-382X.
Zhang, Dayi, Berry, James, Zhu, Di, Wang, Yun, Chen, Yin, Jiang, Bo, Huang, Shi, Langford, Harry, Li, Guanghe, Davison, Paul A., Xu, Jian, Aries, Eriv and Huang, Wei E. (2015) Magnetic nanoparticle-mediated isolation of functional bacteria in a complex microbial community. ISME Journal, 9 . pp. 603-614. doi:10.1038/ismej.2014.161 ISSN 1751-7362.
Zhōnghuá rénmín gònghéguó rénlì zīyuán hé shèhuì bǎozhàng bù (China) [Ministry of Human Resources and Social Security of the People 's Republic of China] (MOHRSS)
Li, Chun-Yang, Chen, Xiu-Lan, Zhang, Dian, Wang, Peng, Sheng, Qi, Peng, Ming, Xie, Bin-Bin, Qin, Qi-Long, Li, Ping-Yi, Zhang, Xi-Ying, Su, Hai-Nan, Song, Xiao-Yan, Shi, Mei, Zhou, Bai-Cheng, Xun, Lu-Ying, Chen, Yin and Zhang, Yu-Zhong (2017) Structural mechanism for bacterial oxidation of oceanic trimethylamine into trimethylamine N -oxide. Molecular Microbiology, 103 (6). pp. 992-1003. doi:10.1111/mmi.13605 ISSN 0950-382X.
This list was generated on Fri Apr 19 11:05:47 2024 BST.