Wang, Yun, Chen, Yin, Zhou, Qian, Huang, Shi, Ning, Kang, Xu, Jian, Kalin, Robert M., Rolfe, Stephen A. and Huang, Wei E.. (2012) A culture-independent approach to unravel uncultured bacteria and functional genes in a complex microbial community. PLoS One, Vol.7 (No.10). e47530. ISSN 1932-6203

Chen, Shuo, Huang, Ziliang, Wu, Jingjun, Chen, Yin, Ye, Fengchun, Zhang, Chong, Yatsunami, Rie, Nakamura, Satoshi and Xing, Xin-Hui (2012) Combination of site-directed mutagenesis and calcium ion addition for enhanced production of thermostable MBP-fused heparinase I in recombinant Escherichia coli. Applied Microbiology and Biotechnology . pp. 1-10. ISSN 0175-7598 (In Press)

Chen, Yin (2012) Comparative genomics of methylated amine utilization by marine Roseobacter clade bacteria and development of functional gene markers (tmm, gmaS). Environmental Microbiology . no-no. ISSN 1462-2912 (In Press)

Hung, Wei-Lian, Wade, William G, Chen, Yin, Kelly, Donovan P. and Wood, Ann P. (2012) Design and evaluation of novel primers for the detection of genes encoding diverse enzymes of methylotrophy and autotrophy. Polish Journal of Microbiology, Vol.61 (No.1). pp. 11-22. ISSN 1733-1331

Chen, Yin, Patel, Nisha A., Crombie, Andrew, Scrivens, James H. and Murrell, J. C. (J. Colin). (2011) Bacterial flavin-containing monooxygenase is trimethylamine monooxygenase. Proceedings of the National Academy of Sciences, Vol.108 (No.43). pp. 17791-17796. ISSN 0027-8424

Rahman, M. Tanvir, Crombie, Andrew, Moussard, Hélène, Chen, Yin and Murrell, J. C. (J. Colin). (2011) Acetate repression of methane oxidation by supplemental methylocella silvestris in a peat soil microcosm. Applied and Environmental Microbiology, Vol.77 (No.12). pp. 4234-4236. ISSN 0099-2240

Chen, Yin and Murrell, J. C. (J. Colin) (2011) DNA stable isotope probing. In: Stable isotope probing and related technologies. Washington DC, USA: American Society for Microbiology, pp. 3-24. ISBN 978-1-555-81537-0

Rahman, Md Tanvir , Crombie, Andrew, Chen, Yin, Stralis-Pavese, Nancy, Bodrossy, Levente, Meir, Patrick, McNamara, Niall P and Murrell, J Colin. (2011) Environmental distribution and abundance of the facultative methanotroph Methylocella. ISME Journal, Vol.5 (No.6). pp. 1061-1066. ISSN 1751-7362

Chen, Yin, Kumaresan, Deepak and Murrell, J. C. (J. Colin) (2011) Stable-isotope probing and its application in soil microbiology. In: Handbook of Soil Science (2nd Edition). CRC Press, pp. 30-38. ISBN 978-0-8493-3136-7

Chen, Yin, Dumont, Marc G., Neufeld, Joshua D. and Murrell, J. Colin (2011) Towards “Focused” Metagenomics: A Case Study Combining DNA Stable-Isotope Probing, Multiple Displacement Amplification, and Metagenomics. In: Handbook of Molecular Microbial Ecology I: Metagenomics and Complementary Approaches. Handbook of Molecular Microbial Ecology . NJ, USA: John Wiley & Sons Ltd., pp. 491-496. ISBN 978-0-470-64479-9

Chen, Yin and Murrell, J. C. (J. Colin) (2010) Geomicrobiology: methanotrophs in moss. Nature Geoscience, Vol.3 (No.9). pp. 595-596. ISSN 1752-0894

Chen, Yin, Crombie, Andrew, Rahman, M. Tanvir, Dedysh, Svetlana N., Liesack, Werner, Stott, Matthew B., Alam, Maqsudul, Theisen, Andreas R., Murrell, J. C. (J. Colin) and Dunfield, Peter F.. (2010) Complete genome sequence of the aerobic facultative methanotroph Methylocella silvestris BL2. Journal of Bacteriology, Vol.192 (No.14). pp. 3840-3841. ISSN 0021-9193

Chen, Yin, Scanlan, Julie, Song, Lijiang, Crombie, Andrew, Rahman, M. Tanvir, Schäfer, Hendrik and Murrell, J. C. (J. Colin). (2010) Gamma-Glutamylmethylamide Is an Essential Intermediate in the Metabolism of Methylamine by Methylocella silvestris. Applied and Environmental Microbiology, Vol.76 (No.13). pp. 4530-4537. ISSN 0099-2240

Chen, Yin, McAleer, Kathryn L. and Murrell, J. C. (J. Colin). (2010) Monomethylamine as a nitrogen source for a nonmethylotrophic bacterium, Agrobacterium tumefaciens. Applied and Environmental Microbiology, Vol.76 (No.12). pp. 4102-4104. ISSN 0099-2240

Jiang, Hao, Chen, Yin, Jiang, Peixia, Zhang, Chong, Smith, Thomas J., Murrell, J. C. (J. Colin) and Xing, Xin-Hui (2010) Methanotrophs: multifunctional bacteria with promising applications in environmental bioengineering. Biochemical Engineering Journal, Vol.49 (No.3). pp. 277-288. ISSN 1369-703X

Chen, Yin and Murrell, J. C. (J. Colin) (2010) When metagenomics meets stable-isotope probing: progress and perspectives. Trends in Microbiology, Vol.18 (No.4). pp. 157-163. ISSN 0966-842X

Cébron, Aurélie, Louvel, Brice, Faure, Pierre, France-Lanord, Christian, Chen, Yin, Murrell, J. Colin and Leyval, Corinne. (2010) Root exudates modify bacterial diversity of phenanthrene degraders in PAH-polluted soil but not phenanthrene degradation rates. Environmental Microbiology, Vol.13 (No.3). pp. 722-736. ISSN 1462-2912

Xing, Xin-Hui, Jiang, Hao, Jiang, Peixia, Zhang, Chong, Chen, Yin and Murrell, C. J.. (2010) Bioengineering of methanotrophic consortia for reduction of methane emission in coal mines. Journal of Biotechnology, Vol.150 (Suppl. 1). pp. 53-54. ISSN 0168-1656

Xing, Xin-Hui, Jiang, Hao, Jiang, Peixia, Zhang, Chong, Chen, Yin and Murrell, C. J. (2010) Bioengineering of methanotrophic consortia for reduction of methane emission in coal mines. In: 14th International Biotechnology Symposium and Exhibition (IBS-2008), Rimini, Italy, 14-18 Sep 2010. Published in: Journal of Biotechnology, Vol.150 (Suppl.1). S541-S542.

Chen, Yin and Murrell, J. C. (J. Colin) (2010) Ecology of aerobic methanotrophs and their role in methane cycling. In: Handbook of hydrocarbon and lipid microbiology. Handbook of hydrocarbon and lipid microbiology, Part 28 . Heidelberg: Springer, pp. 3067-3076. ISBN 978-3-540-77584-3

Chen, Yin, Neufeld, Josh D., Dumont, Marc G., Friedrich, Michael W. and Murrell, J. Colin (2010) Metagenomic Analysis of Isotopically Enriched DNA. In: Metagenomics: Methods and Protocols. Methods in Molecular Biology, Vol.668 . New York: Humana Press, Inc., pp. 67-75. ISBN 978-1-60761-822-5

Han, Bing, Chen, Yin, Abell, Guy, Jiang, Hao, Bodrossy, Levente, Zhao, Jiangang, Murrell, J. C. (J. Colin) and Xing, Xin-Hui. (2009) Diversity and activity of methanotrophs in alkaline soil from a Chinese coal mine. FEMS Microbiology Ecology, Vol.70 (No.2 Sp. Iss. SI). pp. 196-207. ISSN 0168-6496

Chen, Yin, Wu, Liqin, Boden, Rich, Hillebrand, Alexandra, Kumaresan, Deepak, Moussard, Helene, Baciu, Mihai, Lu, Yahai and Murrell, J. C. (J. Colin). (2009) Life without light: microbial diversity and evidence of sulfur- and ammonium-based chemolithotrophy in Movile Cave. ISME Journal, Vol.3 (No.9). pp. 1093-1104. ISSN 1751-7362

Han, Bing, Su, Tao, Wu, Hao, Gou, Zhongxuan, Xing, Xin-Hui, Jiang, Hao, Chen, Yin, Li, Xin and Murrell, J. C. (J. Colin). (2009) Paraffin oil as a "methane vector" for rapid and high cell density cultivation of Methylosinus trichosporium OB3b. Applied Microbiology and Biotechnology, Vol.83 (No.4). pp. 669-677. ISSN 0175-7598

Chen, Yin, Vohra, Jyotsna and Murrell, J. Colin (2009) Applications of DNA-Stable Isotope Probing in Bioremediation Studies. In: Bioremediation: methods and protocols. Methods in Molecular Biology, Vol.599 . New York: Humana Press, Inc., pp. 129-139. ISBN 978-1607-6143-88

Ye, Fengchun, Kuang, Ying, Chen, Shuo, Zhang, Chong, Chen, Yin and Xing, Xin-Hui. (2009) Characteristics of low molecular weight heparin production by an ultrafiltration membrane bioreactor using maltose binding protein fused heparinase I. Biochemical Engineering Journal, Vol.46 (No.2). pp. 193-198. ISSN 1369-703X

Chen, Yin, Dumont, Marc G., Neufeld, Josh D., Bodrossy, Levente, Stralis-Pavese, Nancy, McNamara, Niall P., Ostle, Nick, Briones, Maria J. I. and Murrell, J. C. (J. Colin). (2008) Revealing the uncultivated majority: combining DNA stable-isotope probing, multiple displacement amplification and metagenomic analyses of uncultivated Methylocystis in acidic peatlands. Environmental Microbiology, Vol.10 (No.10). pp. 2609-2622. ISSN 1462-2912

Chen, Yin, McNamara, Niall P., Dumont, Marc G., Bodrossy, Levente, Stralis-Pauese, Nancy and Murrell, J. C. (J. Colin). (2008) The impact of burning and Calluna removal on below-ground methanotroph diversity and activity in a peatland soil. Applied Soil Ecology, Vol.40 (No.2). pp. 291-298. ISSN 0929-1393

Neufeld, Josh D., Chen, Yin, Dumont, Marc G. and Murrell, J. C. (J. Colin). (2008) Marine methylotrophs revealed by stable-isotope probing, multiple displacement amplification and metagenomics. Environmental Microbiology, Vol.10 (No.6). pp. 1526-1535. ISSN 14622912

McDonald, Ian R., Bodrossy, Levente, Chen, Yin and Murrell, J. C. (J. Colin) (2008) Molecular ecology techniques for the study of aerobic methanotrophs. Applied and Environmental Microbiology, Vol.74 (No.5). pp. 1305-1315. ISSN 0099-2240

Chen, Y. (Yin), Dumont, Marc G., McNamara, Niall P., Chamberlain, P. M. (Paul M.), Bodrossy, Levente, Stralis-Pavese, Nancy and Murrell, J. C. (J. Colin). (2008) Diversity of the active methanotrophic community in acidic peatlands as assessed by mRNA and SIP-PLFA analyses. Environmental Microbiology, Vol.10 (No.2). pp. 446-459. ISSN 1462-2912

Cebron, Aurelie, Bodrossy, Levente, Chen, Yin, Singer, Andrew C., Thompson, Ian P., Prosser, James I. and Murrell, J. C. (J. Colin). (2007) Identity of active methanotrophs in landfill cover soil as revealed by DNA-stable isotope probing. FEMS Microbiology Ecology, Vol.62 (No. 1). pp. 12-23. ISSN 0168-6496