
The Library
Browse by Warwick Author
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Number of items: 49.
2020
Kistler, Logan, Thakar, Heather B., VanDerwarker, Amber M., Domic, Alejandra, Bergström, Anders, George, Richard J., Harper, Thomas K., Allaby, Robin G., Hirth, Kenneth and Kennett, Douglas J. (2020) Archaeological Central American maize genomes suggest ancient gene flow from South America. Proceedings of the National Academy of Sciences of the United States of America, 117 (52). pp. 33124-33129. doi:10.1073/pnas.2015560117
Gaffney, Vincent, Fitch, Simon, Bates, Martin, Ware, Roselyn, Kinnaird, Tim, Gearey, Benjamin, Hill, Tom, Telford, Richard, Batt, Cathy, Stern, Ben et al.
(2020)
Multi-proxy characterisation of the Storegga tsunami and its impact on the early holocene landscapes of the southern North Sea.
Geosciences, 10
(7).
270.
doi:10.3390/geosciences10070270
Landoni, Beatrice, Viruel, Juan, Gómez, Rocio, Allaby, Robin G., Brennan, Adrian C., Picó, F. Xavier and Pérez‐Barrales, Rocio (2020) Microsatellite marker development in the crop wild relative Linum bienne using genome skimming. Applications in Plant Sciences, 8 (5). e11349. doi:10.1002/aps3.11349
Ware, Roselyn, Garrod, Benjamin, Macdonald, Hannah and Allaby, Robin G. (2020) Guano morphology has the potential to inform conservation strategies in British bats. PLoS One, 15 (4). e0230865. doi:10.1371/journal.pone.0230865
Cribdon, Becky, Ware, Roselyn, Smith, Oliver, Gaffney, Vincent and Allaby, Robin G. (2020) PIA : more accurate taxonomic assignment of metagenomic data demonstrated on sedaDNA from the North sea. Frontiers in Ecology and Evolution, 8 . 84. doi:10.3389/fevo.2020.00084
2019
Allaby, Robin G. (2019) Clonal crops show structural variation role in domestication. Nature Plants, 5 (9). pp. 915-916. doi:10.1038/s41477-019-0515-8
Smith, Oliver, Nicholson, William V., Kistler, Logan, Mace, Emma, Clapham, Alan, Rose, Pamela, Stevens, Chris, Ware, Roselyn, Samavedam, Siva, Barker, Guy C., Jordan, David, Fuller, Dorian Q. and Allaby, Robin G. (2019) A domestication history of dynamic adaptation and genomic deterioration in Sorghum. Nature Plants, 5 (4). pp. 369-379. doi:10.1038/s41477-019-0397-9
Allaby, Robin G., Ware, Roselyn and Kistler, Logan (2019) A re-evaluation of the domestication bottleneck from archaeogenomic evidence. Evolutionary Applications, 12 (1). pp. 29-37. doi:10.1111/eva.12680
2018
Kistler, Logan, Maezumi, S. Yoshi, de Souza, Jonas Gregorio, Przelomska, Natalia A. S., Costa, Flaviane Malaquias, Smith, Oliver, Loiselle, Hope, Ramos-Madrigal, Jazmin, Wales, Nathan, Ribeiro, Eduardo, Morrison, Ryan R. , Grimaldo, Claudia, Prous, Andre P., Arriaza, Bernardo , Gilbert, M. Thomas P., de Oliveira Freitas, Fabio and Allaby, Robin G. (2018) Multiproxy evidence highlights a complex evolutionary legacy of maize in South America. Science, 362 (6420). pp. 1309-1313. doi:10.1126/science.aav0207
Gutaker , Rafal M. , Zaidem, Maricris, Fu, Yong-Bi , Diederichsen, Axel, Smith, Oliver, Ware, Roselyn and Allaby, Robin G. (2018) Flax latitudinal adaptation at LuTFL1 altered architecture and promoted fiber production. Scientific Reports, 9 (976). doi:10.1038/s41598-018-37086-5
Zhou, Yong, Chen, Zhongxu, Cheng, Mengping, Chen, Jian, Zhu, Tingting, Wang, Rui, Liu, Yaxi, Qi, Pengfei, Chen, Guoyue, Jiang, Qiantao, Wei, Yuming, Luo, Ming-Cheng, Nevo, Eviatar, Allaby, Robin G., Liu, Dengcai, Wang, Jirui, Dvorák, Jan and Zheng, Youliang (2018) Uncovering the dispersion history, adaptive evolution and selection of wheat in China. Plant Biotechnology Journal, 16 (1). pp. 280-291. doi:10.1111/pbi.12770
2017
Allaby, Robin G., Stevens, Chris, Lucas, Leilani, Maeda, Osamu and Fuller, Dorian Q. (2017) Geographic mosaics and changing rates of cereal domestication. Philosophical Transactions of the Royal Society B: Biological Sciences, 372 (1735). 20160429. doi:10.1098/rstb.2016.0429
Smith, Oliver , Palmer, Sarah A., Clapham, Alan J., Rose, Pamela, Liu, Yuan, Wang, Jun and Allaby, Robin G. (2017) Small RNA activity in archaeological barley shows novel germination inhibition in response to environment. Molecular Biology and Evolution, 34 (10). pp. 2555-2562. doi:10.1093/molbev/msx175
Payacan, Claudia, Moncada, Ximena, Rojas, Gloria, Clarke, Andrew C., Chung, Kuo-Fang, Allaby, Robin G., Seelenfreund, Daniela and Seelenfreund, Andrea (2017) Phylogeography of herbarium specimens of asexually propagated paper mulberry [Broussonetia papyrifera (L.) L’Hér. ex Vent. (Moraceae)] reveals genetic diversity across the Pacific. Annals of Botany, 120 (3). pp. 387-404. doi:10.1093/aob/mcx062
Kistler, Logan, Ware, Roselyn, Smith, Oliver, Collins, Matthew and Allaby, Robin G. (2017) A new model for ancient DNA decay based on paleogenomic meta-analysis. Nucleic Acids Research, 45 (11). pp. 6310-6320. doi:10.1093/nar/gkx361
2016
Allaby, Robin G., Kitchen, James and Fuller, Dorian Q. (2016) Surprisingly low limits of selection in plant domestication. Evolutionary Bioinformatics (2). pp. 41-51. doi:10.4137/EBO.S33495
2015
Smith, Oliver, Momber, G., Bates, R., Garwood, P., Fitch, S., Pallen, Mark J., Gaffney, V. and Allaby, Robin G. (2015) Response to comment on "Sedimentary DNA from a submerged site reveals wheat in the British Isles 8000 years ago". Science, 349 (6245). p. 247. doi:10.1126/science.aab2062
Smith, Oliver , Momber, G., Bates, R., Garwood, P., Fitch, S., Pallen, Mark J., Gaffney, V. and Allaby, Robin G. (2015) Sedimentary DNA from a submerged site reveals wheat in the British Isles 8000 years ago. Science, Volume 347 (Number 6225). pp. 998-1001. doi:10.1126/science.1261278
Allaby, Robin G., Kistler, Logan, Gutaker, Rafał M., Ware, Roselyn, Kitchen, James, Smith, Oliver and Clarke, Andrew C. (2015) Archaeogenomic insights into the adaptation of plants to the human environment : pushing plant–hominin co-evolution back to the Pliocene. Journal of Human Evolution, Volume 79 . pp. 150-157. doi:10.1016/j.jhevol.2014.10.014
2014
Allaby, Robin G., Gutaker, Rafał M., Clarke, Andrew C., Pearson, Neil, Ware, Roselyn, Palmer, Sarah A., Kitchen, James and Smith, Oliver (2014) Using archaeogenomic and computational approaches to unravel the history of local adaptation in crops. Philosophical Transactions of the Royal Society B: Biological Sciences, Volume 370 (Number 1660). Article number 20130377. doi:10.1098/rstb.2013.0377
Smith, Oliver , Clapham, Alan J., Rose, Pam, Liu, Yuan, Wang, Jun and Allaby, Robin G. (2014) Genomic methylation patterns in archaeological barley show de-methylation as a time-dependent diagenetic process. Scientific Reports, Volume 4 . Article number 5559. doi:10.1038/srep05559
Fuller, D. Q., Denham, T., Arroyo-Kalin, M., Lucas, L., Stevens, C. J., Qin, L., Allaby, Robin G. and Purugganan, M. D. (2014) Convergent evolution and parallelism in plant domestication revealed by an expanding archaeological record. Proceedings of the National Academy of Sciences of the United States of America, Volume 111 (Number 17). pp. 6147-6152. doi:10.1073/pnas.1308937110
Larson, G., Piperno, D. R., Allaby, Robin G., Purugganan, M. D., Andersson, L., Arroyo-Kalin, M., Barton, L., Climer Vigueira, C., Denham, T., Dobney, K. et al.
(2014)
Current perspectives and the future of domestication studies.
Proceedings of the National Academy of Sciences of the United States of America, Volume 111
(Number 17).
pp. 6139-6146.
doi:10.1073/pnas.1323964111
Gerbault, P., Allaby, Robin G., Boivin, N., Rudzinski, A., Grimaldi, I. M., Pires, J. C., Climer Vigueira, C., Dobney, K., Gremillion, K. J., Barton, L. et al.
(2014)
Storytelling and story testing in domestication.
Proceedings of the National Academy of Sciences of the United States of America, Volume 111
(Number 17).
pp. 6159-6164.
doi:10.1073/pnas.1400425111
Smith, Oliver , Clapham, Alan J., Rose, Pam, Liu, Yuan, Wang, Jun and Allaby, Robin G. (2014) A complete ancient RNA genome : identification, reconstruction and evolutionary history of archaeological Barley Stripe Mosaic Virus. Scientific Reports, Volume 4 . Article number 4003. doi:10.1038/srep04003
2013
Boivin, Nicole, Fuller, Dorian Q., Dennell, Robin, Allaby, Robin G. and Petraglia, Michael D. (2013) Human dispersal across diverse environments of Asia during the Upper Pleistocene. Quaternary International, Volume 300 . pp. 32-47. doi:10.1016/j.quaint.2013.01.008
Kitchen, James and Allaby, Robin G. (2013) Systems modeling at multiple levels of regulation : linking systems and genetic Networks to spatially explicit plant populations. Plants, Volume 2 (Number 1). pp. 16-49. doi:10.3390/plants2010016
2012
Palmer, Sarah A., Clapham, A. J., Rose, P., Freitas, F. O., Owen, B. D., Beresford-Jones, D., Moore, Jonathan D., Kitchen, James and Allaby, Robin G. (2012) Archaeogenomic evidence of punctuated genome evolution in Gossypium. Molecular Biology and Evolution, Volume 29 (Number 8). pp. 2031-2038. doi:10.1093/molbev/mss070
Kitchen, James and Allaby, Robin G. (2012) The limits of mean-field heterozygosity estimates under spatial extension in simulated plant populations. PLoS ONE, Vol.7 (No.8). e43254. doi:10.1371/journal.pone.0043254
Fuller, Dorian Q., Willcox, G. and Allaby, Robin G. (2012) Early agricultural pathways : moving outside the 'core area' hypothesis in Southwest Asia. Journal of Experimental Botany, Vol.63 (No.2). pp. 617-633. doi:10.1093/jxb/err307
Fu, Yong-Bi, Diederichsen, Axel and Allaby, Robin G. (2012) Locus-specific view of flax domestication history. Ecology and Evolution, Vol.2 (No.1). pp. 139-152. doi:10.1002/ece3.57
Kitchen, James, Moore, Jonathan D., Palmer, Sarah A. and Allaby, Robin G. (2012) MCMC-ODPR : primer design optimization using Markov Chain Monte Carlo sampling. BMC Bioinformatics, Vol.13 (No.1). p. 287. doi:10.1186/1471-2105-13-287
Palmer, Sarah A., Smith, Oliver and Allaby, Robin G. (2012) The blossoming of plant archaeogenetics. Annals of Anatomy, Vol.194 (No.1). pp. 146-156. doi:10.1016/j.aanat.2011.03.012
2011
Fuller, Dorian Q., Boivin, Nicole, Ph. D., Hoogervorst, Tom and Allaby, Robin G. (2011) Across the Indian Ocean : the prehistoric movement of plants and animals. Antiquity, Vol.85 (No.328). pp. 544-558.
Fuller, Dorian Q, Willcox, George and Allaby, Robin G. (2011) Cultivation and domestication had multiple origins: arguments against the core area hypothesis for the origins of agriculture in the Near East. World Archaeology, Vol. 43 (No. 4). pp. 628-652. doi:10.1080/00438243.2011.624747
2010
Bergfjord, C., Karg, S., Rast-Eicher, A., Nosch, M. -L., Mannering, U., Allaby, Robin G., Murphy, B. M. and Holst, B. (2010) Comment on "30,000-year-old wild flax fibers". Science, Vol.328 (No.5986). 1634 . doi:10.1126/science.1186345
Fu, Yong-Bi and Allaby, Robin G. (2010) Phylogenetic network of Linum species as revealed by non-coding chloroplast DNA sequences. Genetic Resources and Crop Evolution, Vol.57 (No.5). pp. 667-677. doi:10.1007/s10722-009-9502-7
Fuller, Dorian Q., Allaby, Robin G. and Stevens, Chris (2010) Domestication as innovation : the entanglement of techniques, technology and chance in the domestication of cereal crops. World Archaeology, Vol.42 (No.1). pp. 13-28. doi:10.1080/00438240903429680
Allaby, Robin G. (2010) Integrating the processes in the evolutionary system of domestication. Journal of Experimental Botany, Vol.61 (No.4). pp. 935-944. doi:10.1093/jxb/erp382
Allaby, Robin G., Brown, T. A. and Fuller, Dorian Q. (2010) A simulation of the effect of inbreeding on crop domestication genetics with comments on the integration of archaeobotany and genetics: a reply to Honne and Heun. Vegetation History and Archaeobotany, Vol.19 (No.2). pp. 151-158. doi:10.1007/s00334-009-0232-8
2009
Brown, T. A., Jones, Martin K., Powell, Wayne and Allaby, Robin G. (2009) The complex origins of domesticated crops in the Fertile Crescent. Trends in Ecology & Evolution, Vol.24 (No.2). pp. 103-109. doi:10.1016/j.tree.2008.09.008
Palmer, Sarah A., Moore, Jonathan D., Clapham, Alan J., Rose, Pamela and Allaby, Robin G. (2009) Archaeogenetic evidence of ancient Nubian barley evolution from six to two-row indicates local adaptation. PLoS ONE , Vol.4 (No.7). e6301. doi:10.1371/journal.pone.0006301
2008
Brown, T. A., Jones, Martin K., Powell, Wayne and Allaby, Robin G. (2008) The complex origins of domesticated crops in the Fertile Crescent. Trends in Ecology & Evolution, Vol.24 (No.2). pp. 103-109. doi:10.1016/j.tree.2008.09.008
Allaby, Robin G., Fuller, Dorian Q. and Brown, T. A. (2008) Reply to Ross-Ibarra and Gaut : Multiple domestications do appear monophyletic if an appropriate model is used. Proceedings of the National Academy of Sciences of the United States of America, Vol.105 (No.49). E106-E106. doi:10.1073/pnas.0810296105
Allaby, Robin G., Fuller, Dorian Q. and Brown, T. A. (2008) The genetic expectations of a protracted model for the origins of domesticated crops. Proceedings of the National Academy of Sciences of the United States of America, Vol.105 (No.37). pp. 13982-13986. doi:10.1073/pnas.0803780105
Allaby, Robin G. (2008) The rise of plant domestication : life in the slow lane. Biologist, Vol.55 (No.2). pp. 94-99.
Moore, Jonathan D. and Allaby, Robin G. (2008) TreeMos : a high-throughput phylogenomic approach to find and visualize phylogenetic mosaicism. Bioinformatics, Vol.24 (No.5). pp. 717-718. doi:10.1093/bioinformatics/btn027
2007
Ho, Simon Y. W., Kolokotronis, Sergios-Orestis and Allaby, Robin G. (2007) Elevated substitution rates estimated from ancient DNA sequences. Biology Letters, Vol.3 (No.6). pp. 702-705. doi:10.1098/rsbl.2007.0377
Allaby, Robin G. and Woodwark, Mathew (2007) Phylogenomic analysis reveals extensive phylogenetic mosaicism in the Human GPCR Superfamily. Evolutionary Bioinformatics, Vol.3 . pp. 357-370.
This list was generated on Mon Jan 25 14:38:39 2021 GMT.