2014

Casale, Francesco Paolo, Giurato, Giorgio, Nassa, Giovanni, Armond, Jonathan W., Oates, Chris J., Corá, Davide, Gamba, Andrea, Mukherjee, Sach, Weisz, Alessandro and Nicodemi, Mario. (2014) Single-cell states in the estrogen response of breast cancer cell lines. PLoS ONE , 9 (2). Article number e88485. ISSN 1932-6203

Armond, Jonathan W., Saha, Krishanu, Rana, Anas A., Oates, Chris J., Jaenisch, Rudolf, Nicodemi, Mario and Mukherjee, Sach. (2014) A stochastic model dissects cell states in biological transition processes. Scientific Reports, Volume 4 . Article number 3692. ISSN 2045-2322

2012

Bureau, Romain, Brand, Samuel, Ball, Robin and Nicodemi, Mario. (2012) Flow regimes of a fluid driven granular suspension. Granular Matter, Vol.14 (No.2). pp. 175-178. ISSN 1434-5021

2011

Brand, Samuel, Ball, Robin and Nicodemi, Mario. (2011) Stochastic transitions and jamming in granular pipe flow. Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol.83 (No.3). Article 031309. ISSN 1539-3755

2010

Brand, Samuel, Ciamarra, M. Pica and Nicodemi, Mario. (2010) Complex flow in granular media. Advances in Complex Systems, Vol.13 (No.3 Sp. Iss. SI). pp. 339-347. ISSN 0219-5259

Scialdone, Antonio and Nicodemi, Mario. (2010) Statistical mechanics models for X-chromosome inactivation. Advances in Complex Systems, Vol.13 (No.3). pp. 367-376. ISSN 0219-5259

Amato, R. (Roberto), Pinelli, Michele, D’Andrea, Daniel, Miele, Gennaro, Nicodemi, Mario, Raiconi, Giancarlo and Cocozza, Sergio. (2010) A novel approach to simulate gene-environment interactions in complex diseases. BMC Bioinformatics, Vol.11 (Article 8). ISSN 1471-2105

Ciamarra, Massimo Pica, Nicodemi, Mario and Coniglio, Antonio. (2010) Recent results on the jamming phase diagram. Soft Matter, Vol.6 (No.13). pp. 2871-2874. ISSN 1744-683X

2009

Nicodemi, Mario, Ciamarra, M. P. and Coniglio, A.. (2009) Rheology of sheared monodisperse granular suspensions. European Physical Hournal: Special Topics, Vol.179 . pp. 157-163. ISSN 1951-6355

Ciamarra, Massimo Pica, De Candia, Antonio, Fierro, Annalisa, Nicodemi, Mario and Coniglio, Antonio (2009) Statistical mechanics of static granular packings under gravity. In: Workshop on Modelling Geophysical Systems by Statistical Mechanics Methods, Erice, Italy, April 27-MAY 02, 2008. Published in: International Journal of Modern Physics B, Vol.23 (No.28-29). pp. 5345-5358.

Nicodemi, Mario, de Candia, Antonio and Coniglio, Antonio. (2009) Aggregation of fibrils and plaques in amyloid molecular systems. Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol.80 (No.4 Part 1). Article no. 041914. ISSN 1539-3755

Veglio, A., Gamba, A., Nicodemi, Mario, Bussolino, F. and Serini, G.. (2009) Symmetry breaking mechanism for epithelial cell polarization. Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol.80 (No.3 Part 1). Article no. 031919. ISSN 1539-3755

Scialdone, Antonio and Nicodemi, Mario (2009) DNA loci cross-talk through thermodynamics. Journal of Biomedicine and Biotechnology, 20 . 516723. ISSN 1110-7243

Nicodemi, Mario and Prisco, Antonella. (2009) Thermodynamic pathways to genome spatial organization in the cell nucleus. Biophysical Journal, Vol.96 (No.6). pp. 2168-2177. ISSN 0006-3495

2008

Scialdone, Antonio and Nicodemi, Mario. (2008) Mechanics and dynamics of X-chromosome pairing at X inactivation. PL o S Computational Biology, Vol.4 (No.12). ISSN 1553-734X

de Arcangelis, L., Lippiello, E., Godano, C. and Nicodemi, Mario. (2008) Statistical properties and universality in earthquake and solar flare occurrence. European Physical Journal B. Condensed Matter and Complex Systems, Volume 64 (Numbers 3-4). pp. 551-555. ISSN 1434-6028

Nicodemi, Mario, Panning, Barbara and Prisco, Antonella. (2008) The colocalization transition of homologous chromosomes at meiosis. Physical Review E, Vol.77 (No.6 Part 1). ISSN 1539-3755

Nicodemi, Mario, Panning, Barbara and Prisco, Antonella. (2008) A thermodynamic switch for chromosome colocalization. Genetics, Vol.179 (No.1). pp. 717-721. ISSN 0016-6731

Grebenkov, Denis S., Ciamarra, Massimo Pica, Nicodemi, Mario and Coniglio, Antonio. (2008) Flow, ordering, and jamming of sheared granular suspensions. Physical Review Letters, Volume 100 (Number 7). Article No. 078001. ISSN 0031-9007

2007

Ciamarra, M. Pica, Coniglio, A., de Martino, D. and Nicodemi, Mario. (2007) Shear- and vibration-induced order-disorder transitions in granular media. European Physical Journal E. Soft Matter, Vol.24 (No.4). pp. 411-415. ISSN 1292-8941

Nicodemi, Mario and Prisco, Antonella. (2007) Self-assembly and DNA binding of the blocking factor in X chromosome inactivation. PLoS Computational Biology, Vol.3 (No.11). pp. 2135-2142. ISSN 1553-734X

Ciamarra, Massimo Pica, Nicodemi, Mario and Coniglio, Antonio. (2007) Granular packs under vertical tapping: structure evolution, grain motion, and dynamical heterogeneities. Physical Review E, Vol.75 (No.2). Article: 021303. ISSN 1539-3755

2003

Warren, P., Weitz, D. A. , Nicodemi, Mario, Coffey, William, Felderhof, B. U. and Ball, Robin (2003) Dynamics of weakly aggregated colloidal particles - discussion. Royal Society of London. Philosophical Transactions A. Mathematical, Physical and Engineering Sciences, Vol.361 (No.1805). pp. 764-766. ISSN 1364-503X