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Number of items: 332.

A

Alam, Mohammad T., Olin-Sandoval, Viridiana, Stincone, Anna, Keller, Markus A., Zelezniak, Aleksej, Luisi, Ben and Ralser, Markus (2017) The self-inhibitory nature of metabolic networks and its alleviation through compartmentalization. Nature Communications, 8 . 16018. doi:10.1038/ncomms16018

Auckland, Philip, Clarke, Nicholas I., Royle, Stephen J. and McAinsh, Andrew D. (2017) Congressing kinetochores progressively load Ska complexes to prevent force-dependent detachment. The Journal of Cell Biology, 216 (6). pp. 1623-1639. doi:10.1083/jcb.201607096

Alford, Justine E., Marongiu, Michela, Watkins, Gemma L. and Anderson, Emma C. (2016) Human immunodeficiency virus type 2 (HIV-2) Gag is trafficked in an AP-3 and AP-5 dependent manner. PLoS One, 11 (7). e0158941. doi:10.1371/journal.pone.0158941

Atia, Jolene, McCloskey, Conor, Shmygol, Anatoly, Rand, D. A. (David A.), Berg, Hugo van den and Blanks, Andrew M. (2016) Reconstruction of cell surface densities of ion pumps, exchangers, and channels from mRNA expression, conductance kinetics, whole-cell calcium, and current-clamp voltage recordings, with an application to human uterine smooth muscle cells. PLoS Computational Biology, 12 (4). e1004828. doi:10.1371/journal.pcbi.1004828

Abraham, Jean E., Hiller, Louise, Dorling, Leila, Vallier, Anne-Laure, Dunn, Janet A., Bowden, Sarah, Ingle, Susan, Jones, Linda, Hardy, Richard, Twelves, Christopher, Poole, Christopher J., Pharoah, Paul D. P., Caldas, Carlos and Earl, Helena M. (2015) A nested cohort study of 6,248 early breast cancer patients treated in neoadjuvant and adjuvant chemotherapy trials investigating the prognostic value of chemotherapy-related toxicities. BMC Medicine, 13 (1). 306. doi:10.1186/s12916-015-0547-5

Auckland, Philip and McAinsh, Andrew D. (2015) Building an integrated model of chromosome congression. Journal of Cell Science, 128 (18). pp. 3363-3374. doi:10.1242/jcs.169367

Achana, Felix A., Cooper, Nicola S., Bujkiewicz, Sylwia, Hubbard, Stephanie J., Kendrick, D., Jones, David R. and Sutton, Alex J. (2014) Network meta-analysis of multiple outcome measures accounting for borrowing of information across outcomes. BMC Medical Research Methodology, 14 (1). p. 92. doi:10.1186/1471-2288-14-92

Atkinson, Nicky J., Witteveldt, Jeroen, Evans, David J. and Simmonds, Peter (2014) The influence of CpG and UpA dinucleotide frequencies on RNA virus replication and characterization of the innate cellular pathways underlying virus attenuation and enhanced replication. Nucleic Acids Research, Volume 42 (Number 7). pp. 4527-4545. doi:10.1093/nar/gku075

Alford, Justine E., Gumbs, Jade and Anderson, Emma C. (2014) A new role for clathrin adaptor proteins 1 and 3 in lipoplex trafficking. PLoS ONE, Volume 9 (Number 3). Article number e91429. doi:10.1371/journal.pone.0091429

Anderson, Roy M., Truscott, James E., Pullan, Rachel L., Brooker, Simon J. and Hollingsworth, T. Déirdre (2013) How effective is school-based deworming for the community-wide control of soil-transmitted helminths? PLoS Neglected Tropical Diseases, Volume 7 (Number 2). Article no. e2027. doi:10.1371/journal.pntd.0002027

Abrams, William R., Madsen, Jens, Gaiha, Gaurav D., Palaniyar, Nades, Dong, Tao, Mitchell, Daniel A. and Clark, Howard W. (2013) Surfactant protein D modulates HIV infection of both T-cells and dendritic cells. PLoS One, Volume 8 (Number 3). Article no. e59047. doi:10.1371/journal.pone.0059047

Alderwick, Luke J., Lloyd, Georgina S., Lloyd, Adrian, Lovering, Andrew L., Eggeling, L. and Besra, Gurdyal S. (2011) Biochemical characterization of the Mycobacterium tuberculosis phosphoribosyl-1-pyrophosphate synthetase. Glycobiology, Vol.21 (No.4). pp. 410-425. doi:10.1093/glycob/cwq173

Anzures-Cabrera, J. and Hutton, Jane (2010) Competing risks, left truncation and late entry effect in A-bomb survivors cohort. Journal of Applied Statistics, Vol.37 (No.5). pp. 821-831. doi:10.1080/02664760902914417

B

Benford, Heather Elizabeth, Bolborea, Matei, Pollatzek, Eric, Lossow, Kristina, Hermans-Borgmeyer, Irm, Liu, Beihui, Meyerhof, Wolfgang, Kasparov, Sergey and Dale, Nicholas (2017) A sweet taste receptor-dependent mechanism of glucosensing in hypothalamic tanycytes. Glia, 65 (5). pp. 773-789. doi:10.1002/glia.23125

Bonell, C., Shackleton, N., Fletcher, A., Jamal, F., Allen, E., Mathiot, A., Markham, Wolfgang A., Aveyard, P. and Viner, R. (2017) Student- and school-level belonging and commitment and student smoking, drinking and misbehaviour. Health Education Journal, 76 (2). pp. 206-220. doi:10.1177/0017896916657843

Bugg, Tim, Rodolis, Maria T., Mihalyi, Agnes and Jamshidi, Shirin (2016) Inhibition of phospho-MurNAc-pentapeptide translocase (MraY) by nucleoside natural product antibiotics, bacteriophage <phi>X174 lysis protein E, and cationic antibacterial peptides. Bioorganic and Medicinal Chemistry . doi:10.1016/j.bmc.2016.03.018

Bettencourt, Conceição, Forabosco, Paola, Wiethoff, Sarah, Heidari, Moones, Johnstone, Daniel M., Botía, Juan A., Collingwood, Joanna F., Hardy, John, Milward, Elizabeth A., Ryten, Mina and Houlden, Henry (2016) Gene co-expression networks shed light into diseases of brain iron accumulation. Neurobiology of Disease, 87 . pp. 59-68. doi:10.1016/j.nbd.2015.12.004

Brooker, Simon J., Mwandawiro, Charles S., Halliday, Katherine E., Njenga, Sammy M., Mcharo, Carlos, Gichuki, Paul M., Wasunna, Beatrice, Kihara, Jimmy H., Njomo, Doris, Alusala, Dorcas et al.

(2015) Interrupting transmission of soil-transmitted helminths : a study protocol for cluster randomised trials evaluating alternative treatment strategies and delivery systems in Kenya. BMJ Open, 5 (10). pp. 1-27. e008950 . doi:10.1136/bmjopen-2015-008950

Bowes, Lucy, Joinson, Carol, Wolke, Dieter and Lewis, Glyn (2015) Peer victimisation during adolescence and its impact on depression in early adulthood : prospective cohort study in the United Kingdom. BMJ, 350 . pp. 1-9. h2469. doi:10.1136/bmj.h2469

Britton, Tom, House, Thomas A., Lloyd, Alun L., Mollison, Denis, Riley, Steven and Trapman, Pieter (2015) Five challenges for stochastic epidemic models involving global transmission. Epidemics, Volume 10 . pp. 54-57. doi:10.1016/j.epidem.2014.05.002

Bancroft, James M., Auckland, Philip, Samora, C. P. and McAinsh, Andrew D. (2015) Chromosome congression is promoted by CENP-Q- and CENP-E-dependent pathways. Journal of Cell Science, 128 (1). pp. 171-184. doi:10.1242/jcs.163659

Bilderbeck, Amy C., Brown, G. D. A. (Gordon D. A.), Read, Judi, Woolrich, Mark W., Cowen, P. J., Behrens, Timothy E. J. and Rogers, Robert D. (2014) Serotonin and social norms : tryptophan depletion impairs social comparison and leads to resource depletion in a multiplayer harvesting game. Psychological Science, Volume 25 (Number 7). pp. 1303-1313. doi:10.1177/0956797614527830

Baggaley, Rebecca F., White, Richard G., Hollingsworth, T. Déirdre and Boily, Marie-Claude (2013) Heterosexual HIV-1 infectiousness and antiretroviral use : systematic review of prospective studies of discordant couples. Epidemiology, Vol.24 (No.1). pp. 110-121. doi:10.1097/EDE.0b013e318276cad7

Batra, Jyotsna, Lose, Felicity, O'Mara, Tracy, Marquart, Louise, Stephens, Carson, Alexander, Kimberly, Srinivasan, Srilakshmi, Eeles, Rosalind A., Easton, Douglas F., Olama, Ali Amin Al et al.

(2011) Association between Prostinogen (KLK15) genetic variants and prostate cancer risk and aggressiveness in Australia and a meta-analysis of GWAS data. PLoS ONE, Vol.6 (No.11). e26527. doi:10.1371/journal.pone.0026527

Burroughs, Nigel John, Köhler, Karsten, Miloserdov, Vladimir, Dustin, Michael L., Van der Merwe, P. Anton and Davis, Daniel M. (2011) Boltzmann energy-based image analysis demonstrates that extracellular domain size differences explain protein segregation at immune synapses. PLoS Computational Biology, Vol.7 (No.8). e1002076. doi:10.1371/journal.pcbi.1002076

Batson, Sarah, Rea, Dean, Fülöp, Vilmos and Roper, David I. (2010) Crystallization and preliminary X-ray analysis of a D-alanyl-D-alanine ligase (EcDdlB) from Escherichia coli. Journal of Experimental Psychology: Human Perception and Performance, Vol.66 (No.4). pp. 405-408. doi:10.1107/S1744309110003970

Baldwin, Adam, Loughlin, Michael, Dr., Caubilla-Barron, Juncal, Kucerova, Eva, Manning, Georgina, Dowson, Christopher G. and Forsythe, S. J. (Steve J.) (2009) Multilocus sequence typing of Cronobacter sakazakii and Cronobacter malonaticus reveals stable clonal structures with clinical significance which do not correlate with biotypes. BMC Microbiology, Vol.9 (Article 223). doi:10.1186/1471-2180-9-223

Baggaley, Rebecca F., Griffin, Jamie T., Chapman, Ruth, Hollingsworth, T. Déirdre, Nagot, Nicolas, Delany, Sinead, Mayaud, Philippe, de Wolf, Frank, Fraser, Christophe, Ghani, Azra C. and Weiss, Helen A. (2009) Estimating the public health impact of the effect of herpes simplex virus suppressive therapy on plasma HIV-1 viral load. AIDS, Vol.23 (No.8). pp. 1005-1013. doi:10.1097/QAD.0b013e32832aadf2

Brunner, Eric, Kivimäki, Mika, Witte, Daniel R., Lawlor, Debbie A., Smith, George Davey, Cooper, Jackie A., Miller, Michelle A., Lowe, G. D. O., Rumley, Ann, Casas, Juan P., Shah, Tina, Humphries, Steve E., Hingorani, Aroon, Marmot, Michael G., Timpson, Nicholas J. and Kumari, Meena (2008) Inflammation, insulin resistance, and diabetes : mendelian randomization using CRP haplotypes points upstream. PL o S One, Vol.5 (No.8). doi:10.1371/journal.pmed.0050155

C

Carpenter, Byron and Tate, Christopher G. (2017) Active state structures of G protein-coupled receptors highlight the similarities and differences in the G protein and arrestin coupling interfaces. Current Opinion in Structural Biology, 45 . pp. 124-132. doi:10.1016/j.sbi.2017.04.010

Connelly, Stephanie, Shin, Seung G., Dillon, Robert J., Ijaz, Umer Z., Quince, Christopher, Sloan, William T. and Collins, Gavin (2017) Bioreactor scalability : laboratory-scale bioreactor design influences performance, ecology, and community physiology in expanded granular sludge bed bioreactors. Frontiers in Microbiology, 8 . 664. doi:10.3389/fmicb.2017.00664

Carpenter, Byron and Tate, Christopher G. (2016) Engineering a minimal G protein to facilitate crystallisation of G protein-coupled receptors in their active conformation. Protein Engineering Design and Selection, 29 (12). pp. 583-594. doi:10.1093/protein/gzw049

Chikhani, M., Das, Anup, Haque, M., Wang, Wenjie , Bates, Declan and Hardman, J. G. (2016) High PEEP in ARDS : quantitative evaluation between improved oxygenation and decreased oxygen delivery. British Journal of Anaesthesia, 117 (5). pp. 650-658. doi:10.1093/bja/aew314

Chiswick, Carolyn, Reynolds, Rebecca M., Denison, Fiona, Drake, Amanda J., Forbes, Shareen, Newby, David E., Walker, Brian R., Quenby, Siobhan, Wray, Susan, Weeks, Andrew, Lashen, Hany, Rodriguez, Aryelly, Murray, Gordon, Whyte, Sonia and Norman, Jane E. (2015) Effect of metformin on maternal and fetal outcomes in obese pregnant women (EMPOWaR) : a randomised, double-blind, placebo-controlled trial. The Lancet Diabetes & Endocrinology, 3 (10). pp. 778-786. doi:10.1016/S2213-8587(15)00219-3

Chen, Y-F.‏‎, Hemming, Karla, Chilton, Peter J., Gupta, Keshav K., Altman, Douglas G. and Lilford, Richard (2014) Scientific hypotheses can be tested by comparing the effects of one treatment over many diseases in a systematic review. Journal of Clinical Epidemiology, Volume 67 (Number 12). pp. 1309-1319. doi:10.1016/j.jclinepi.2014.08.007

Crispin, Max, Harvey, David J., Bitto, David, Halldorsson, Steinar, Bonomelli, Camille, Edgeworth, Matthew, Scrivens, James H., Huiskonen, Juha T. and Bowden, Thomas A. (2014) Uukuniemi Phlebovirus assembly and secretion leave a functional imprint on the Virion Glycome. Journal of Virology, Volume 88 (Number 17). pp. 10244-10251. doi:10.1128/JVI.01662-14

Crispin, Max, Harvey, David J., Bitto, David, Bonomelli, Camille, Edgeworth, Matthew, Scrivens, James H., Huiskonen, Juha T. and Bowden, Thomas A. (2014) Structural plasticity of the Semliki Forest virus glycome upon interspecies transmission. Journal of proteome research, Volume 13 (Number 3). pp. 1702-1712. doi:10.1021/pr401162k

Crispin, Max, Harvey, David J., Bitto, David, Bonomelli, Camille, Edgeworth, Matthew, Scrivens, James H., Huiskonen, Juha T. and Bowden, Thomas A. (2014) Structural plasticity of the semliki forest virus glycome upon interspecies transmission. Journal of proteome research, Volume 13 (Number 3). pp. 1702-1712. doi:10.1021/pr401162k

Cartwright, Rufus, Mangera, Altaf, Tikkinen, Kari A. O., Rajan, Prabhakar, Pesonen, Jori, Kirby, Anna C., Thiagamoorthy, Ganesh, Ambrose, Chris, Gonzalez-Maffe, Juan, Bennett, Phillip R., Palmer, Tom M., Walley, Andrew, Jarvelin, Marjo-Riitta, Khullar, Vik and Chapple, Christopher R. (2014) Systematic review and meta-analysis of candidate gene association studies of lower urinary tract symptoms in men. European Urology . doi:10.1016/j.eururo.2014.01.007

Caudron, Quentin, Donnelly, Simon R., Brand, Samuel and Timofeeva, Yulia (2012) Computational convergence of the path integral for real dendritic morphologies. The Journal of Mathematical Neuroscience, Volume 2 (Number 1). doi:10.1186/2190-8567-2-11

Corrêa, Sônia A. L., Hunter, Christopher J., Palygin, Oleg, Wauters, Sandrine, Martin, Kirsty J., McKenzie, Colin, McKelvey, Kim M. (Kim Martin), Morris, R. G. M. (Richard G. M.), Pankratov, Yuriy, Arthur, J. Simon C. and Frenguelli, Bruno G. (2012) MSK1 regulates homeostatic and experience-dependent synaptic plasticity. Journal of Neuroscience, Vol.32 (No.38). pp. 13039-13051. doi:10.1523/JNEUROSCI.0930-12.2012

Chan, Jacqueline, Halachev, Mihail R., Loman, Nicholas J., Constantinidou, Chrystala and Pallen, Mark J. (2012) Defining bacterial species in the genomic era : insights from the genus Acinetobacter. BMC Microbiology, 12 (1). 302. doi:10.1186/1471-2180-12-302

Cooke, Emma J., Savage, Richard S., Kirk, Paul, Darkins, Robert and Wild, David L. (2011) Bayesian hierarchical clustering for microarray time series data with replicates and outlier measurements. BMC Bioinformatics, Vol.12 (No.1). p. 399. doi:10.1186/1471-2105-12-399

Cubo, Leticia, Pizarro, Ana M., Quiroga, Adoracion G., Salassa, Luca, Navarro-Ranninger, Carmen and Sadler, P. J. (2010) Photoactivation of trans diamine platinum complexes in aqueous solution and effect on reactivity towards nucleotides. Journal of Inorganic Biochemistry, Vol.104 (No.9). pp. 909-918. doi:10.1016/j.jinorgbio.2010.04.009

Crispin, Max, Chang, Veronica T., Harvey, David J., Dwek, Raymond A., Evans, Edward J., Stuart, David I., Jones, E. Yvonne, Lord, Mike, Spooner, Robert A. and Davis, Simon J. (2009) A human embryonic kidney 293T cell line mutated at the Golgi -mannosidase II locus. Journal of Biological Chemistry . doi:10.1074/jbc.M109.006254

Caulfield, Mark, Munroe, Patricia B., O'Neill, Deb, Witkowska, Kate, Charchar, Fadi J., Doblado, Manuel, Evans, Sarah, Eyheramendy, Susana, Onipinla, Abiodun, Howard, Philip et al.

(2008) SLC2A9 is a high-capacity urate transporter in humans. PL o S Medicine, Vol.5 (No.10). doi:10.1371/journal.pmed.0050197

D

Deng, Wanlu, Rolls, Edmund T., Ji, Xiaoxi, Robbins, Trevor W., Banaschewski, Tobias, Bokde, Arun L. W., Bromberg, Uli, Buechel, Christian, Desrivières, Sylvane, Conrod, Patricia et al.

(2017) Separate neural systems for behavioral change and for emotional responses to failure during behavioral inhibition. Human Brain Mapping, 38 (7). pp. 3527-3537.

Daumas, Stephanie, Hunter, Christopher J., Mistry, Rajen B., More, Lorenzo, Privitera, Lucia, Cooper, Daniel D., Reyskens, Kathleen M., Flynn, Harry T., Morris, Richard G. M., Simon, J., Arthur, C. and Frenguelli, Bruno G. (2017) The kinase function of MSK1 regulates BDNF signaling to CREB and basal synaptic transmission, but is not required for hippocampal long-term potentiation or spatial memory. eNeuro, 4 (1). 0212-0216. doi:10.1523/ENEURO.0212-16.2017

D’Amore, Rosalinda, Ijaz, Umer Zeeshan, Schirmer, Melanie, Kenny, John G., Gregory, Richard, Darby, Alistair C., Shakya, Migun, Podar, Mircea, Quince, Christopher and Hall, Neil (2016) A comprehensive benchmarking study of protocols and sequencing platforms for 16S rRNA community profiling. BMC Genomics, 17 (1). doi:10.1186/s12864-015-2194-9

Desrivières, Sylvane, Lourdusamy, Anbarasu, Tao, C., Toro, Roberto, Jia, Tianye, Loth, Eva, Medina, Lourdes Martinez, Kepa, Agnieszka, Fernandes, Alinda, Ruggeri, Barbara et al.

(2015) Single nucleotide polymorphism in the neuroplastin locus associates with cortical thickness and intellectual ability in adolescents. Molecular Psychiatry, 20 . pp. 263-274. doi:10.1038/mp.2013.197

Dancer, R. C. A., Parekh, Dhruv, Lax, S., D'Souza, V., Zheng, S., Bassford, C. R., Park, D., Bartis, D. G., Mahida, R., Turner, A. M. et al.

(2015) Vitamin D deficiency contributes directly to the acute respiratory distress syndrome (ARDS). Thorax, 70 (7). pp. 617-624. doi:10.1136/thoraxjnl-2014-206680

Davies, Tim, Kodera, Noriyuki, Kaminski Schierle, Gabriele S., Rees, Eric, Erdelyi, Miklos, Kaminski, Clemens F., Ando, Toshio and Mishima, Masanori (2015) CYK4 promotes antiparallel microtubule bundling by optimizing MKLP1 neck conformation. PLoS Biology, Volume 13 (Number 4). Article number e1002121. doi:10.1371/journal.pbio.1002121

Das, Anup, Cole, Oana, Chikhani, Marc, Wang, Wenfei, Ali, Tayyba, Haque, Mainul, Bates, Declan and Hardman, Jonathan G. (2015) Evaluation of lung recruitment maneuvers in acute respiratory distress syndrome using computer simulation. Critical Care, Volume 19 (Number 1). Article number 8. doi:10.1186/s13054-014-0723-6

Doughty, Emma L., Sergeant, Martin J., Ifedayo, Adetifa M. O., Antonio, Martin and Pallen, Mark J. (2014) Culture-independent detection and characterisation of Mycobacterium tuberculosis and M. africanum in sputum samples using shotgun metagenomics on a benchtop sequencer. PeerJ PrePrints . Article number e585 . doi:10.7717/peerj.585

The IMAGEN consortium (Including:

Dickie, Erin W., Tahmasebi, Amir, French, Leon, Kovacevic, Natasa, Banaschewski, Tobias, Barker, Gareth J., Bokde, Arun, Büchel, Christian, Conrod, Patricia J., Flor, Herta et al.

). (2014) Correction: Global genetic variations predict brain response to faces. PLoS Genetics, Volume 10 (Number 10). Article number e1004802. doi:10.1371/journal.pgen.1004802

Davis, Oliver S. P., Band, Gavin, Pirinen, Matti, Haworth, Claire M. A., Meaburn, Emma L., Kovas, Yulia, Harlaar, Nicole, Docherty, Sophia J., Hanscombe, Ken B., Trzaskowski, Maciej et al.

(2014) The correlation between reading and mathematics ability at age twelve has a substantial genetic component. Nature Communications, Volume 5 . Article number 4204 . doi:10.1038/ncomms5204

Dixon, Emma V., Claridge, Jolyon K., Harvey, David J., Baruah, Kavitha, Yu, Xiaojie, Vesiljevic, Snezana, Mattick, Susan, Pritchard, Laura K., Krishna, Benjamin, Scanlan, Christopher N., Schnell, Jason R., Higgins, Matthew K., Zitzmann, Nicole and Crispin, Max (2014) Fragments of bacterial endoglycosidase S and immunoglobulin G reveal subdomains of each that contribute to deglycosylation. Journal of Biological Chemistry, Volume 289 (Number 20). pp. 13876-13889. doi:10.1074/jbc.M113.532812

Danon, Leon, Read, Jonathan M., House, Thomas A., Vernon, Matthew C. and Keeling, Matthew James (2013) Social encounter networks : characterizing Great Britain. Proceedings of the Royal Society B: Biological Sciences, Volume 280 (Number 1765). p. 20131037. doi:10.1098/rspb.2013.1037

Darkins, Robert, Cooke, Emma J., Ghahramani, Zoubin, Kirk, P. (Paul), Wild, David L. and Savage, Richard S. (2013) Accelerating Bayesian hierarchical clustering of time series data with a randomised algorithm. PLoS One, 8 (4). e59795. doi:10.1371/journal.pone.0059795

Davis, Oliver S. P., Haworth, Claire M. A., Lewis, Cathryn M. and Plomin, Robert (2012) Visual analysis of geocoded twin data puts nature and nurture on the map. Molecular Psychiatry, Volume 17 (Number 9). pp. 867-874. doi:10.1038/mp.2012.68

Diviney, Sinéad, Tuplin, Andrew, Struthers, Madeleine, Armstrong, Victoria, Elliott, Richard M., Simmonds, Peter and Evans, David J. (2008) A hepatitis C virus cis-acting replication element forms a long-range RNA-RNA interaction with upstream RNA sequences in NS5B. Journal of Virology, Vol.82 (No.18). pp. 9008-9022. doi:10.1128/JVI.02326-07

Dafforn, Tim, Rajendra, Jacindra, Halsall, David J., Serpell, Louise C. and Rodger, Alison (2004) Protein fiber linear dichroism for structure determination and kinetics in a low-volume, low-wavelength couette flow cell. Biophysical Journal, Vol.86 (No.1). pp. 404-410. doi:10.1016/S0006-3495(04)74116-8

E

Enki, Doyo G., Garthwaite, Paul H., Farrington, C. Paddy, Noufaily, Angela, Andrews, Nick J. and Charlett, Andre (2016) Comparison of statistical algorithms for the detection of infectious disease outbreaks in large multiple surveillance systems. PLoS One, 11 (8). e0160759. doi:10.1371/journal.pone.0160759

Earnshaw, William C., Allshire, R. C., Black, Ben E., Bloom, Kerry S. , Brinkley, B. R., Brown, William, Cheeseman, Iain M., Choo, K. H. Andy, Copenhaver, Gregory P., DeLuca, Jennifer G. et al.

(2013) Esperanto for histones : CENP-A, not CenH3, is the centromeric histone H3 variant. Chromosome Research, Volume 21 (Number 2). pp. 101-106. doi:10.1007/s10577-013-9347-y

Erent, Muriel, Drummond, Douglas R. and Cross, R. A. (2012) S. pombe kinesins-8 promote both nucleation and catastrophe of microtubules. PLoS One, Vol.7 (No.2). e30738. doi:10.1371/journal.pone.0030738

Easton, A. J. (Andrew J.), Scott, P. D. (Paul D.), Edworthy, Nicole Lynn, Meng, Bo, Marriott, Anthony C. and Dimmock, N. J. (2011) A novel broad-spectrum treatment for respiratory virus infections : influenza-based defective interfering virus provides protection against pneumovirus infection in vivo. Vaccine, Vol.29 (No.15). pp. 2777-2784. doi:10.1016/j.vaccine.2011.01.102

PanScan Consortium (Including:

Elliott, Katherine S., Zeggini, Eleftheria, McCarthy, Mark I., Gudmundsson, Julius, Sulem, Patrick, Stacey, Simon N., Thorlacius, Steinunn, Amundadottir, Laufey, Grönberg, Henrik, Xu, Jianfeng et al.

). (2010) Evaluation of association of HNF1B variants with diverse cancers : collaborative analysis of data from 19 genome-wide association studies. PLoS One, Vol.5 (No.5). e10858. doi:10.1371/journal.pone.0010858

Eames, Ken T. D. (2006) Contact tracing strategies in heterogeneous populations. Epidemiology and Infection, Vol.13 (No.3). pp. 443-454. doi:10.1017/S0950268806006923

Edmunds, W. John , Medley, Graham, Nokes, D. James, O'Callaghan, C. J., Whittle, H. C. and Hall, A. J. (Andrew James) (1996) Epidemiological patterns of hepatitis B virus (HBV) in highly endemic areas. Epidemiology and Infection, Vol.117 (No.2). pp. 313-325. doi:10.1017/S0950268800001497

F

Ferrante di Ruffano, Lavinia, Dinnes, Jacqueline, Taylor-Phillips, Sian, Davenport, Clare, Hyde, Chris and Deeks, Jonathan J. (2017) Research waste in diagnostic trials : a methods review evaluating the reporting of test-treatment interventions. BMC Medical Research Methodology, 17 (1). doi:10.1186/s12874-016-0286-0

Feber, Andrew, Dhami, Pawan, Dong, Liqin, de Winter, Patricia, Tan, Wei Shen, Martínez-Fernández, Mónica, Paul, Dirk S., Hynes-Allen, Antony, Rezaee, Sheida, Gurung, Pratik et al.

(2017) UroMark—a urinary biomarker assay for the detection of bladder cancer. Clinical Epigenetics, 9 (1). 8. doi:10.1186/s13148-016-0303-5

Fullam, Elizabeth, Prokes, Ivan, Fütterer, Klaus and Besra, Gurdyal S. (2016) Structural and functional analysis of the solute-binding protein UspC from Mycobacterium tuberculosis that is specific for amino sugars. Open Biology (6). doi:10.1098/rsob.160105

Farrelly, Simone, Lester, Helen, Rose, Diana, Birchwood, M. J., Marshall, Max, Waheed, Waquas, Henderson, R. Claire, Szmukler, George and Thornicroft, Graham (2015) Barriers to shared decision making in mental health care : qualitative study of the Joint Crisis Plan for psychosis. Health Expectations, 19 (2). pp. 448-458. doi:10.1111/hex.12368

Forrest, Michael D. (2014) Can the thermodynamic Hodgkin-Huxley model of voltage-dependent conductance extrapolate for temperature? Computation , Volume 2 (Number 2). pp. 47-60. doi:10.3390/computation2020047

Fisher, H., Schreier, Andrea, Zammit, Stanley, Maughan, Barbara, Munafo, Marcus R., Lewis, Glyn and Wolke, Dieter (2013) Pathways between childhood victimization and psychosis-like symptoms in the ALSPAC Birth Cohort. Schizophrenia Bulletin, Volume 39 (Number 5). pp. 1045-1055. doi:10.1093/schbul/sbs088

Forrest, Michael D. (2013) Mathematical model of bursting in dissociated Purkinje neurons. PLoS One, Volume 8 (Number 8). e68765. doi:10.1371/journal.pone.0068765

Forrest, Michael D., Wall, Mark J., Press, Daniel A. and Feng, Jianfeng (2012) The sodium-potassium pump controls the intrinsic firing of the cerebellar Purkinje neuron. PLoS ONE, Vol.7 (No.12). e51169. doi:10.1371/journal.pone.0051169

Fone, David, Dunstan, Frank, White, James, Webster, Chris, Rodgers, Sarah, Lee, Shin, Shiode, Naru, Orford, Scott, Weightman, Alison, Brennan, Iain, Sivarajasingam, Vas, Morgan, Jennifer, Fry, Richard J. and Lyons, Ronan, MD, FRCP‏ (2012) Change in alcohol outlet density and alcohol-related harm to population health (CHALICE). BMC Public Health, Volume 12 (Number 1). pp. 1-10. Article number 428. doi:10.1186/1471-2458-12-428

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Rolls, Edmund T. (2017) A scientific theory of ars memoriae : spatial view cells in a continuous attractor network with linked items. Hippocampus, 27 (5). pp. 570-579. doi:10.1002/hipo.22713

Rognes, Torbjørn, Flouri, Tomáš, Nichols, Ben, Quince, Christopher and Mahé, Frédéric (2016) VSEARCH : a versatile open source tool for metagenomics. PeerJ, 4 . e2584. doi:10.7717/peerj.2584

Rolls, Edmund T. (2016) A non-reward attractor theory of depression. Neuroscience & Biobehavioral Reviews, 68 . pp. 47-58. doi:10.1016/j.neubiorev.2016.05.007

Rolls, Edmund T. (2016) Cortical coding. Language, Cognition and Neuroscience . pp. 1-14. doi:10.1080/23273798.2016.1203443

Rouse, Peter C., Zanten, Jet Veldhuijzen van, Metsios, George S., Ntoumanis, Nikos, Yu, Chen-an, Koutedakis, Yiannis, Fenton, Sally A. M., Coast , Joanna, Mistry, Hema, Kitas, George D. and Duda, Joan L. (2014) Fostering autonomous motivation, physical activity and cardiorespiratory fitness in rheumatoid arthritis : protocol and rationale for a randomised control trial. BMC Musculoskeletal Disorders, Volume 15 . Article number 445. doi:10.1186/1471-2474-15-445

Rajmil, Luis, de Sanmamed, María-José, Choonara, Imti, Faresjö, Tomas, Hjern, Anders, Kozyrskyj, Anita, Lucas, Patricia J., Raat, Hein, Seguin, Louise, Spencer, Nick and Taylor-Robinson, David (2014) Impact of the 2008 economic and financial crisis on child health : a systematic review. International Journal of Environmental Research and Public Health, Volume 11 (Number 6). pp. 6528-6546. doi:10.3390/ijerph110606528

Ronald, Angelica, Sieradzka, Dominika, Cardno, Alastair G., Haworth, Claire M. A., McGuire, Philip and Freeman, Daniel (2014) Characterization of psychotic experiences in adolescence using the specific psychotic experiences questionnaire : findings from a study of 5000 16-year-old twins. Schizophrenia Bulletin, Volume 40 (Number 4). pp. 868-877. doi:10.1093/schbul/sbt106

Rolls, Edmund T. (2013) The mechanisms for pattern completion and pattern separation in the hippocampus. Frontiers in Systems Neuroscience, 7 . pp. 1-21. 00074. doi:10.3389/fnsys.2013.00074

Remenyi, Judit, van den Bosch, Mirjam W. M., Palygin, Oleg, Mistry, Rajen B., McKenzie, Colin, Macdonald, Andrew, Hutvagner, Gyorgy, Arthur, J. Simon C., Frenguelli, Bruno G. and Pankratov, Yuriy (2013) miR-132/212 knockout mice reveal roles for these miRNAs in regulating cortical synaptic transmission and plasticity. PLoS One, Volume 8 (Number 4). Article number e62509. doi:10.1371/journal.pone.0062509

Ray, Swagat, Panova, Tatiana, Miller, G. (Gail), Volkov, Arsen, Porter, Andrew C. G., Russell, J. (Jackie), Panov, Konstantin I. and Zomerdijk, Joost C. B. M. (2013) Topoisomerase IIα promotes activation of RNA polymerase I transcription by facilitating pre-initiation complex formation. Nature Communications, Vol.4 . Article: 1598. doi:10.1038/ncomms2599

Ruane, Karen M., Lloyd, Adrian J., Fülöp, Vilmos, Dowson, Christopher G., Barreteau, Hélène, Boniface, Audrey, Dementin, Sébastien, Blanot, Didier, Mengin-Lecreulx, Dominique, Gobec, Stanislav, Dessen, Andréa and Roper, David I. (2013) Specificity determinants for lysine incorporation in staphylococcus aureus peptidoglycan as revealed by the structure of a MurE enzyme ternary complex. Journal of Biological Chemistry, Volume 288 (Number 46). Article number 33439. doi:10.1074/jbc.M113.508135

Rolls, Edmund T. (2012) Invariant visual object and face recognition : neural and computational bases, and a model, VisNet. Frontiers in Computational Neuroscience, Volume 6 . Article number 35. doi:10.3389/fncom.2012.00035

Rae, Peter C., Kelly, Richard D. W., Egginton, Stuart and St. John, Justin C. (2011) Angiogenic potential of endothelial progenitor cells and embryonic stem cells. Vascular Cell, Vol.3 (No.11). doi:10.1186/2045-824X-3-11

Rothnie, Alice, Clarke, Anthony R., Kuzmic, Petr, Cameron, Angus and Smith, Corinne J. (2011) A sequential mechanism for clathrin cage disassembly by 70-kDa heat-shock cognate protein (Hsc70) and auxilin. National Academy of Sciences. Proceedings, Vol.108 (No.17). pp. 6927-6932. doi:10.1073/pnas.1018845108

Redondo, Roger L., Okuno, Hiroyukki, Dr., Spooner, Patrick A., Frenguelli, Bruno G., Bito, Haruhiko and Morris, R. G. M. (Richard G. M.) (2010) Synaptic tagging and capture : differential role of distinct calcium/calmodulin kinases in protein synthesis-dependent long-term potentiation. Journal of Neuroscience, Vol.30 (No.14). pp. 4981-4989. doi:10.1523/JNEUROSCI.3140-09.2010

Rijt, Sabine H. van and Sadler, P. J. (2009) Current applications and future potential for bioinorganic chemistry in the development of anticancer drugs. Drug Discovery Today, Vol.14 (No.23-24). pp. 1089-1097. doi:10.1016/j.drudis.2009.09.003

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Scott, Jan, Marwaha, Steven, Ratheesh, Aswin, Macmillan, Iain, Yung, R., Morriss, R. K., Hickie, Ian and Bendolf, Andreas (2017) Bipolar at-risk criteria : an examination of which clinical features have optimal utility for identifying youth at risk of early transition from depression to bipolar disorders. Schizophrenia Bulletin, 43 (3). pp. 737-744. doi:10.1093/schbul/sbw154

Sullivan, S., Thompson, Andrew David, Kounali, Daphne, Lewis, Glyn and Zammit, Stanley (2017) The longitudinal association between external locus of control, social cognition and adolescent psychopathology. Social Psychiatry and Psychiatric Epidemiology, 52 (6). pp. 643-655. doi:10.1007/s00127-017-1359-z

Sherrard-Smith, Ellie, Churcher, Thomas S., Upton, Leanna M., Sala, Katarzyna A., Zakutansky, Sara E., Slater, Hannah C., Blagborough, Andrew M. and Betancourt, Michael (2017) A novel model fitted to multiple life stages of malaria for assessing efficacy of transmission-blocking interventions. Malaria Journal, 16 (1). 137. doi:10.1186/s12936-017-1782-3

Sinclair, Lucas, Ijaz, Umer Z., Jensen, Lars Juhl, Coolen, Marco J.L., Gubry-Rangin, Cecile, Chroňáková, Alica, Oulas, Anastasis, Pavloudi, Christina, Schnetzer, Julia, Weimann, Aaron, Ijaz, Ali, Eiler, Alexander, Quince, Christopher and Pafilis, Evangelos (2016) Seqenv : linking sequences to environments through text mining. PeerJ, 4 . e2690. doi:10.7717/peerj.2690

Salimraj, Ramya, Zhang, Lihong, Hinchliffe, Philip, Wellington, E. M. H., Brem, Jürgen, Schofield, Christopher J., Gaze, William H. and Spencer, James (2016) Structural and biochemical characterization of Rm3, a subclass B3 Metallo-β-Lactamase identified from a functional metagenomic study. Antimicrobial Agents and Chemotherapy, 60 (10). pp. 5828-5840. doi:10.1128/AAC.00750-16

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(2016) A genomic approach to therapeutic target validation identifies a glucose-lowering GLP1R variant protective for coronary heart disease. Science Translational Medicine, 8 (341). 341ra76. doi:10.1126/scitranslmed.aad3744

Shakoor, Sania, Zavos, Helena M. S., Haworth, Claire M. A., McGuire, Philip, Cardno, Alastair G., Freeman, Daniel and Ronald, Angelica (2016) Association between stressful life events and psychotic experiences in adolescence : evidence for gene-environment correlations. The British Journal of Psychiatry, 208 (6). pp. 532-538. doi:10.1192/bjp.bp.114.159079

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Schirmer, Melanie, D’Amore, Rosalinda, Ijaz, Umer Z., Hall, Neil and Quince, Christopher (2016) Illumina error profiles : resolving fine-scale variation in metagenomic sequencing data. BMC Bioinformatics, 17 (1). pp. 1-15. 125. doi:10.1186/s12859-016-0976-y

Savage, Richard S. and Yuan, Yinyin (2016) Predicting chemoinsensitivity in breast cancer with ’omics/digital pathology data fusion. Royal Society Open Science , 3 (2). pp. 1-13. 140501. doi:10.1098/rsos.140501

Stallard, Nigel, Kunz, Cornelia, Todd, Susan, Parsons, Nicholas R. and Friede, Tim (2015) Flexible selection of a single treatment incorporating short-term endpoint information in a phase II/III clinical trial. Statistics in Medicine, 34 (23). pp. 3104-3115. doi:10.1002/sim.6567

Sudlow, Cathie, Gallacher, John, Allen, Naomi E., Beral, V. (Valerie), Burton, Paul R., Danesh, John, Downey, Paul, Elliott, Paul, Green, Jane, Landray, Martin J., Liu, Bette, Matthews, Paul, Ong, Giok J., Pell, Jill, Silman, Alan J., Young, Alan, Sprosen, Tim, Peakman, Tim and Collins, Rory (2015) UK Biobank : an Open Access resource for identifying the causes of a wide range of complex diseases of middle and old age. PLoS Medicine, Volume 12 (Number 3). pp. 1-10. Article number e1001779. doi:10.1371/journal.pmed.1001779

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(2014) Leptin mediates the increase in blood pressure associated with obesity. Cell, Volume 159 (Number 6). pp. 1404-1416. doi:10.1016/j.cell.2014.10.058

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Siervo, Mario, Riley, Heather L., Fernandez, Bernadette O., Leckstrom, Carl A., Martin, Daniel S., Mitchell, Kay, Levett, Denny Z. H., Montgomery, Hugh E., Mythen, Monty G., Grocott, Michael P. W. and Feelisch, Martin (2014) Effects of prolonged exposure to hypobaric hypoxia on oxidative stress, inflammation and gluco-insular regulation : the not-so-sweet price for good regulation. PLoS One, Volume 9 (Number 4). Article number e94915. doi:10.1371/journal.pone.0094915

Caudwell Xtreme Everest Research Group (Including: Siervo, Mario, Riley, Heather L., Fernandez, Bernadette O., Leckstrom, Carl A., Martin, Daniel S., Mitchell, Kay, Levett, Denny Z. H., Montgomery, Hugh E., Mythen, Monty G., Grocott, Michael P. W. and Feelisch, Martin). (2014) Effects of prolonged exposure to hypobaric hypoxia on oxidative stress, inflammation and gluco-insular regulation : the not-so-sweet price for good regulation. PLoS One, 9 (4). pp. 1-10. e94915. doi:10.1371/journal.pone.0094915

Salcedo-Sora, J. Enrique, Caamano-Gutierrez, Eva, Ward, Stephen A. and Biagini, Giancarlo A. (2014) The proliferating cell hypothesis : a metabolic framework for Plasmodium growth and development. Trends in Parasitology, Volume 30 (Number 4). pp. 170-175. doi:10.1016/j.pt.2014.02.001

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Simms, Victoria, Gilmore, Camilla, Cragg, Lucy, Marlow, Neil, Wolke, Dieter and Johnson, Samantha J. (2013) Mathematics difficulties in extremely preterm children : evidence of a specific deficit in basic mathematics processing. Pediatric Research, Volume 73 (Number 2). pp. 236-244. doi:10.1038/pr.2012.157

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Winsper, Catherine, Wolke, Dieter, Bryson, Alex, Thompson, Andrew David and Singh, Swaran P. (2016) School mobility during childhood predicts psychotic symptoms in late adolescence. Journal of Child Psychology and Psychiatry, 57 (8). pp. 957-966. doi:10.1111/jcpp.12572

Winkler, Anderson M., Webster, Matthew A., Brooks, Jonathan C., Tracey, Irene, Smith, Stephen M. and Nichols, Thomas E. (2016) Non-parametric combination and related permutation tests for neuroimaging. Human Brain Mapping, 37 (4). pp. 1486-1511. doi:10.1002/hbm.23115

Wadhwa, Karan, Carmona-Echeveria, Lina, Kuru, Timur, Gaziev, Gabriele, Serrao, Eva, Parashar, D., Frey, Julia, Dimov, Ivailo, Seidenader, Jonas, Acher, Pete, Muir, Gordon, Doble, Andrew, Gnanapragasam, Vincent J., Hadaschik, Boris and Kastner, Christof (2016) Transperineal prostate biopsies for diagnosis of prostate cancer are well tolerated : a prospective study using patient reported outcome measures. Asian Journal of Andrology, 19 (1). pp. 62-66. doi:10.4103/1008-682X.173453

Wolke, Dieter, Baumann, Nicole, Strauss, Victoria, Johnson, Samantha J. and Marlow, Neil (2015) Bullying of preterm children and emotional problems at school age : cross-culturally invariant effects. Journal of Pediatrics, 166 (6). pp. 1417-1422. doi:10.1016/j.jpeds.2015.02.055

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Weich, Scott, Pearce, Hannah L., Croft, Peter, Singh, Swaran P., Crome, Ilana B., Bashford, James and Frisher, Martin (2014) Effect of anxiolytic and hypnotic drug prescriptions on mortality hazards : retrospective cohort study. BMJ, Volume 348 . Article number g1996. doi:10.1136/bmj.g1996

Wilson, Martin P., Cummins, Carole L., MacPherson, Lesley, Sun, Yu, Natarajan, Kal, Grundy, Richard G., Arvanitis, Theodoros N., Kauppinen, Risto A. and Peet, Andrew C. (2013) Magnetic resonance spectroscopy metabolite profiles predict survival in paediatric brain tumours. European Journal of Cancer, Volume 49 (Number 2). pp. 457-464. doi:10.1016/j.ejca.2012.09.002

Wason, James M. S., Jaki, Thomas and Stallard, Nigel (2013) Planning multi-arm screening studies within the context of a drug development program. Statistics in Medicine, Volume 32 (Number 20). pp. 3424-3435. doi:10.1002/sim.5787

Woolley, Michael J., Watkins, Harriet A., Taddese, Bruck, Karakullukcu, Z. Gamze, Barwell, James, Smith, Kevin J., Hay, Debbie L., Poyner, David, Reynolds, Christopher A. and Conner, Alex C. (2013) The role of ECL2 in CGRP receptor activation : a combined modelling and experimental approach. Journal of The Royal Society Interface, Volume 10 (Number 88). p. 20130589. doi:10.1098/rsif.2013.0589

Wolke, Dieter, Schreier, Andrea, Zanarini, Mary C. and Winsper, Catherine (2012) Bullied by peers in childhood and borderline personality symptoms at 11 years of age : a prospective study. Journal of Child Psychology and Psychiatry, Volume 53 (Number 8). pp. 846-855. doi:10.1111/j.1469-7610.2012.02542.x

Williams, Tiffany M., Loman, Nicholas J., Ebruke, Chinelo, Musher, Daniel M., Adegbola, Richard A., Pallen, Mark J., Weinstock, George M. and Antonio, Martin (2012) Genome analysis of a highly virulent serotype 1 strain of streptococcus pneumoniae from West Africa. PLoS One, Volume 7 (Number 10). Article number e26742. doi:10.1371/journal.pone.0026742

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