Journal Article

Abuhammad, Areej, Fullam, Elizabeth, Lowe, Edward D., Staunton, David, Kawamura, Akane, Westwood, Isaac, Bhakta, Sanjib, Garner, Alun Christopher, Wilson, David L., Seden, Peter T., Davies, Stephen G., Russell, Angela J., Garman, Elspeth F. and Sim, Edith (2012) Piperidinols that show anti-tubercular activity as inhibitors of arylamine N-acetyltransferase: an essential enzyme for mycobacterial survival inside macrophages. PLoS One, Volume 7 (Number 12). Article number e52790. doi:10.1371/journal.pone.0052790

Agoti, Charles N., Mwihuri, Alexander G., Sande, Charles J., Onyango, Clayton O., Medley, Graham, Cane, Patricia and Nokes, D. James (2012) Genetic relatedness of infecting and reinfecting respiratory syncytial virus strains identified in a birth cohort from rural Kenya. Journal of Infectious Diseases, Volume 206 (Number 10). pp. 1532-1541. doi:10.1093/infdis/jis570

Albiniak, A. M., Baglieri, J. and Robinson, Colin (2012) Targeting of lumenal proteins across the thylakoid membrane. Journal of Experimental Botany, Vol.63 (No.4). pp. 1689-1698. doi:10.1093/jxb/err444

Almeida, André M., Parreira, José R., Santos, Romana, Duque, Ana Sofia, Francisco, Rita, Tomé, Daniel F. A., Ricardo, Cândido Pinto, Coelho, Ana Varela and Fevereiro, Pedro (2012) A proteomics study of the induction of somatic embryogenesis in Medicago truncatula using 2DE and MALDI-TOF/TOF. Physiologia Plantarum, Volume 146 (Number 2). pp. 236-249. doi:10.1111/j.1399-3054.2012.01633.x

Anderson, Roy M., Hollingsworth, T. Déirdre, Truscott, James E. and Brooker, Simon J. (2012) Optimisation of mass chemotherapy to control soil-transmitted helminth infection. The Lancet, Vol.379 (No.9813). pp. 289-290. doi:10.1016/S0140-6736(12)60460-7

Andres-Enguix, Isabelle, Shang, Lijun, Stansfeld, Phillip J., Morahan, Julia M., Sansom, Mark S. P., Lafrenière, Ronald G., Roy, Bishakha, Griffiths, Lyn R., Rouleau, Guy A., Ebers, George C., Cader, Zameel M. and Tucker, Stephen J. (2012) Functional analysis of missense variants in the TRESK (KCNK18) K+ channel. Scientific Reports, 2 (1). 237 . doi:10.1038/srep00237

Armengaud, Jean, Christie-Oleza, Joseph Alexander, Clair, Gérémy, Malard, Véronique and Duport, Catherine (2012) Exoproteomics : exploring the world around biological systems. Expert Review of Proteomics, Vol.9 (No.5). pp. 561-575. doi:10.1586/epr.12.52

Asally, Munehiro, Kittisopikul, M., Rue, P., Du, Y., Hu, Z., Cagatay, T., Robinson, A. B., Lu, H., Garcia-Ojalvo, Jordi and Suel, G. M. (2012) Localized cell death focuses mechanical forces during 3D patterning in a biofilm. Proceedings of the National Academy of Sciences of the United States of America, 109 (46). pp. 18891-18896. doi:10.1073/pnas.1212429109

Bagavathiannan, M. V., Norsworthy, J. K. (Jason K.), Smith, K. L. (Kenneth L.) and Neve, Paul (2012) Seed production of barnyardgrass (Echinochloa crus-galli) in response to time of emergence in cotton and rice. The Journal of Agricultural Science, Vol.150 (No.6). pp. 717-724. doi:10.1017/S0021859611000876

Baglieri, J., Beck, D., Vasisht, Nishi, Smith, Corinne J. and Robinson, Colin (2012) Structure of TatA paralog, TatE, suggests a tructurally homogeneous form of Tat protein translocase that transports folded proteins of differing diameter. Journal of Biological Chemistry, Vol.287 (No.10). pp. 7335-7344. doi:10.1074/jbc.M111.326355

Baglieri, J., Beck, Daniel, Vasisht, Nishi, Smith, Corinne J. and Robinson, Colin (2012) Structure of TatA Paralog, TatE, suggests a structurally homogeneous form of Tat protein translocase that transports folded proteins of differing diameter. Journal of Biological Chemistry, 287 (10). pp. 7335-7344. doi:10.1074/jbc.M111.326355

Baltrus, David A., Nishimura, Marc T., Dougherty, Kevin M., Biswas, Surojit, Mukhtar, M. Shahid, Vicente, Joana G., Holub, E. B. and Dangl, J. L. (Jeffery L.) (2012) The molecular basis of host specialization in bean pathovars of Pseudomonas syringae. Molecular Plant-Microbe Interactions, Vol.25 (No.7). pp. 877-888. doi:10.1094/MPMI-08-11-0218

Baranski, Rafal, Allender, Charlotte J. and Klimek-Chodacka, Magdalena (2012) Towards better tasting and more nutritious carrots: Carotenoid and sugar content variation in carrot genetic resources. Food Research International, Vol. 47 (No. 2). pp. 182-187. doi:10.1016/j.foodres.2011.05.006

Barbez, E., Kubes, M., Rolcik, J., Beziat, C., Pencik, A., Wang, B., Rosquete, M. R., Zhu, J., Dobrev, P. I., Lee, Y., Zazimalova, E., Petrasek , J., Geisler, M., Friml, J. and Kleine-Vehn, J. (2012) A novel putative auxin carrier family regulates intracellular auxin homeostasis in plants. Nature, 485 (7396). pp. 119-122. doi:10.1038/nature11001

Barker, Z. E., Wright, Jordan L., Blowey, R. W., Armory, J. R. and Green, Laura E. (2012) Uptake and effectiveness of interventions to reduce claw lesions in 40 dairy herds in the UK. Animal Welfare, Volume 21 (Number 4). pp. 563-576. doi:10.7120/09627286.21.4.563

Barnett, James P., Millard, Andrew D., Ksibe, Amira Z., Scanlan, David J., Schmid, Ralf and Blindauer, Claudia A. (2012) Mining genomes of marine cyanobacteria for elements of zinc homeostasis. Frontiers in Microbiology, Volume 3 . Article number 142. doi:10.3389/fmicb.2012.00142

Barnett, James P., Scanlan, David J. and Blindauer, Claudia A. (2012) Fractionation and identification of metalloproteins from a marine cyanobacterium. Analytical and Bioanalytical Chemistry, Vol.402 (No.10). pp. 3371-3377. doi:10.1007/s00216-011-5708-6

Barrett, Perry and Bolborea, Matei (2012) Molecular pathways involved in seasonal body weight and reproductive responses governed by melatonin. Journal of Pineal Research , 52 (4). pp. 376-388. doi:10.1111/j.1600-079X.2011.00963.x

Barton, Nick H., Cadillo-Quiroz, Hinsby, Didelot, Xavier, Held, Nicole L., Herrera, Alfa, Darling, Aaron, Reno, Michael L., Krause, David J. and Whitaker, Rachel J. (2012) Patterns of gene flow define species of Thermophilic Archaea. PLoS Biology, 10 (2). e1001265. doi:10.1371/journal.pbio.1001265

Bassel, George, Gaudinier, Allison, Brady, Siobhan M., Hennig, Lars, Rhee, Seung Y. and De Smet, Ive (2012) Systems analysis of plant functional, transcriptional, physical interaction, and metabolic networks. The Plant Cell, 24 (10). pp. 3859-3875. doi:10.1105/tpc.112.100776

The International Arabidopsis Informatics Consortium (Including: Bastow, Ruth). (2012) Taking the next step : building an arabidopsis information portal. The Plant Cell, 24 (6). pp. 2248-2256. doi:10.1105/tpc.112.100669

Baxter, Laura, Jironkin, Aleksey, Hickman, R. D. G., Moore, Jonathan D., Barrington, Christopher, Krusche, Peter, Dyer, Nigel, Buchanan-Wollaston, Vicky, Tiskin, Alexander, Beynon, Jim, Denby, Katherine J. and Ott, Sascha (2012) Conserved noncoding sequences highlight shared components of regulatory networks in dicotyledonous plants. The Plant Cell, Vol.24 (No.10). pp. 3949-3965. doi:10.1105/tpc.112.103010

Becraft, Philip W. and Gutierrez-Marcos, José F. (2012) Endosperm development : dynamic processes and cellular innovations underlying sibling altruism. Wiley Interdisciplinary Reviews: Developmental Biology, Volume 1 (Number 4). pp. 579-593. doi:10.1002/wdev.31

Behjati, Mohaddeseh, Torktaz, Ibrahim, Mohammadpour, Mehrdad, Ahmadian, Gholamreza and Easton, A. J. (Andrew J.) (2012) Comparative modeling of CCRL1, a key protein in masked immune diseases and virtual screening for finding inhibitor of this protein. Bioinformation, Vol.8 (No.7). pp. 336-340. doi:10.6026/97320630008336

Bhagooli, R. and Sheppard, Charles (Charles R. C.) (2012) Prediction of recurrences of mass coral bleaching / mortality and vulnerability of reef-building corals to climate change in Mauritian and Japanese waters. University of Mauritius research journal, Volume 18A . pp. 105-121.

Boltze, Johannes, Schmidt, Uwe R., Reich, Doreen M., Kranz, Alexander, Reymann, Klaus G., Strassburger, Maria, Lobsien, Donald, Wagner, Daniel-Christoph, Förschler, Annette and Schäbitz, Wolf-Rüdiger (2012) Determination of the therapeutic time window for human umbilical cord blood mononuclear cell transplantation following experimental stroke in rats. Cell Transplantation, 21 (6). pp. 1199-1211. doi:10.3727/096368911X589609

Booyjzsen, Claire, Scarff, Charlotte A., Moreton, Ben, Portman, Ian J., Scrivens, James H., Costantini, Giovanni and Sadler, P. J. (2012) Fibrillation of transferrin. Biochimica et Biophysica Acta (BBA) - General Subjects, Vol.1820 (No.3). pp. 427-436. doi:10.1016/j.bbagen.2011.11.004

Bouman, Heather A., Lepère, Cécile, Scanlan, David J. and Osvaldo, Ulloa (2012) Phytoplankton community structure in a high-nutrient, low-chlorophyll region of the eastern Pacific Subantarctic region during winter-mixed and summer-stratified conditions. Deep Sea Research Part I : Oceanographic Research Papers, Volume 69 . pp. 1-11. doi:10.1016/j.dsr.2012.04.008

Brookes, Emily, de Santiago, Inês, Hebenstreit, Daniel, Morris, Kelly J., Carroll, Tom, Xie, Sheila Q., Stock, Julie K., Heidemann, Martin, Eick, Dirk, Nozaki, Naohito, Kimura, Hiroshi, Ragoussis, Jiannis, Teichmann, Sarah A. and Pombo, Ana (2012) Polycomb associates genome-wide with a specific RNA polymerase II variant, and regulates metabolic genes in ESCs. Cell Stem Cell, Vol. 10 (No. 2). pp. 157-170. doi:10.1016/j.stem.2011.12.017

Bull, James C., Kenyon, Emma J. and Cook, Kevan J. (2012) Wasting disease regulates long-term population dynamics in a threatened seagrass. Oecologia , Volume 169 (Number 1). pp. 135-142. doi:10.1007/s00442-011-2187-6

Bull, James C., Ryabov, Eugene V., Prince, Gillian, Mead, A. (Andrew), Zhang, Cunjin, Baxter, Laura, Pell, Judith K., Osborne, Juliet L. and Chandler, Dave (2012) A strong immune response in young adult honeybees masks their increased susceptibility to infection compared to older bees. PLoS Pathogens, Vol.8 (No.12). e1003083. doi:10.1371/journal.ppat.1003083

Burgess, P. J., Rivas Casado, Monica, Gavu, Jerry, Mead, A. (Andrew), Cockerill, Tim, Lord, Richard, Van der Horst, Dan and Howard, D. C. (2012) A framework for reviewing the trade-offs between renewable energy, food, feed and wood production at a local level. Renewable and Sustainable Energy Reviews , Vol.16 (No.1). pp. 129-142. doi:10.1016/j.rser.2011.07.142

Burkhardt, Jana, Kirsten, Holger, Holland, Heidrun, Krupp, Wolfgang, Ligges, Carolin, Quente, Elfi, Boltze, Johannes, Ahnert, Peter and Wilcke, Arndt (2012) Association of rs2069459 in the CDK5 gene with dyslexia in a German cohort. Psychiatric Genetics, 22 (6). pp. 307-308. doi:10.1097/YPG.0b013e328353aeae

Burns, Ian G., Durnford, James, Lynn, James, McClement, Sandy, Hand, Paul and Pink, David (2012) The influence of genetic variation and nitrogen source on nitrate accumulation and iso-osmotic regulation by lettuce. Plant and Soil, Vol.352 (No.1-2). pp. 321-339. doi:10.1007/s11104-011-0999-0

Calderón Villalobos, Luz Irina A, Lee, Sarah C., Oliveira, Cesar de, Ivetac, Anthony, Brandt, Wolfgang, Armitage, Lynne, Sheard, Laura B., Tan, Xu, Parry, Geraint, Mao, Haibin, Zheng, Ning, Napier, R. (Richard), Kepinski, Stefan and Estelle, Mark (2012) A combinatorial TIR1/AFB–Aux/IAA co-receptor system for differential sensing of auxin. Nature Chemical Biology, Volume 8 (Number 5). pp. 477-485. doi:10.1038/nchembio.926

Calleja, E., Ilbery, B. and Mills, P. R. (2012) Agricultural change and the rise of the British strawberry industry, 1920–2009. Journal of Rural Studies, Volume 28 (Number 4). pp. 603-611. doi:10.1016/j.jrurstud.2012.07.005

Calleja, E., Ilbery, B., Spence, N. J. and Mills, P. R. (2012) The effectiveness of phytosanitary controls in preventing the entry of Colletotrichum acutatumin the UK strawberry sector. Plant Pathology, Volume 62 (Number 2). pp. 266-278. doi:10.1111/j.1365-3059.2012.02647.x

Carbonero, Franck, Oakley, Brian B., Hawkins, Robert J. and Purdy, Kevin J. (2012) Genotypic distribution of a specialist model microorganism, methanosaeta, along an estuarine gradient : does metabolic restriction limit niche differentiation potential? Microbial Ecology, 63 (4). pp. 856-864. doi:10.1007/s00248-011-9993-6

Carpenter, Byron, Hemsworth, Glyn R., Wu, Zida, Maamra, Mabrouka, Strasburger, Christian J., Ross, Richard J. and Artymiuk, Peter J. (2012) Structure of the human obesity receptor leptin-binding domain reveals the mechanism of leptin antagonism by a monoclonal antibody. Structure, 20 (3). pp. 487-497. doi:10.1016/j.str.2012.01.019

Carrera, Javier, Elena, Santiago F. and Jaramillo, Alfonso (2012) Computational design of genomic transcriptional networks with adaptation to varying environments. Proceedings of the National Academy of Sciences of the United States of America, 109 (38). pp. 15277-82. doi:10.1073/pnas.1200030109

Cevik, Volkan, Kidd, B. N., Zhang, P., Hills, Claire E., Kiddle, Steven J., Denby, Katherine J., Holub, E. B., Cahill, D. M., Manners, J. M., Schenk, P. M., Beynon, Jim and Kazan, K. (2012) MEDIATOR25 acts as an integrative hub for the regulation of jasmonate-responsive gene expression in Arabidopsis. Plant Physiology, Vol.160 (No.1). pp. 541-555. doi:10.1104/pp.112.202697

Cevik, Volkan, Kidd, B. N., Zhang, Peijun, Hills, Claire E., Kiddle, Steven J., Denby, Katherine J., Holub, E. B., Cahill, D. M., Manners, J. M., Schenk, P. M., Beynon, Jim and Kazan, K. (2012) MEDIATOR25 acts as an integrative Hub for the regulation of jasmonate-responsive gene expression in arabidopsis. Plant Physiology, Volume 160 (Number 1). pp. 541-555. doi:10.1104/pp.112.202697

Chapman, N. H., Bonnet, J., Grivet, L., Lynn, J., Graham, N., Smith, R., Sun, Guangai, Walley, Peter Glen, Poole, M., Causse, M., King, G. J., Baxter, C. and Seymour, G. B. (Graham B.) (2012) High-resolution mapping of a fruit firmness-related quantitative trait locus in tomato reveals epistatic interactions associated with a complex combinatorial locus. Plant Physiology, Volume 159 (Number 4). pp. 1644-1657. doi:10.1104/pp.112.200634

Chen, Jing, Huang, P. T., Zhang, K. Y. and Ding, F. R. (2012) Isolation of biosurfactant producers, optimization and properties of biosurfactant produced by Acinetobacter sp. from petroleum-contaminated soil. Journal of Applied Microbiology, 112 (4). pp. 660-671. doi:10.1111/j.1365-2672.2012.05242.x

Chen, Shuo, Huang, Ziliang, Wu, Jingjun, Chen, Yin, Ye, Fengchun, Zhang, Chong, Yatsunami, Rie, Nakamura, Satoshi and Xing, Xin-Hui (2012) Combination of site-directed mutagenesis and calcium ion addition for enhanced production of thermostable MBP-fused heparinase I in recombinant Escherichia coli. Applied Microbiology and Biotechnology, Volume 97 (Issue 7). pp. 2907-2916. doi:10.1007/s00253-012-4145-6

Chen, Yin (2012) Comparative genomics of methylated amine utilization by marine Roseobacter clade bacteria and development of functional gene markers (tmm, gmaS). Environmental Microbiology, Volume 14 (Number 9). pp. 2308-2322. doi:10.1111/j.1462-2920.2012.02765.x

Chope, G. A., Cools, K., Hammond, John P., Thompson, Andrew J. and Terry, L. A. (2012) Physiological, biochemical and transcriptional analysis of onion bulbs during storage. Annals of Botany, Vol.109 (No.4). pp. 819-831. doi:10.1093/aob/mcr318

Christie-Oleza, Joseph Alexander, Fernandez, Bernard, Nogales, Balbina, Bosch, Rafael and Armengaud, Jean (2012) Proteomic insights into the lifestyle of an environmentally relevant marine bacterium. The ISME Journal, Volume 6 (Number 1). pp. 124-135. doi:10.1038/ismej.2011.86

Christie-Oleza, Joseph Alexander, Miotello, Guylaine and Armengaud, Jean (2012) High-throughput proteogenomics of Ruegeria pomeroyi : seeding a better genomic annotation for the whole marine Roseobacter clade. BMC Genomics, Volume 13 (Number 1). Article number 73. doi:10.1186/1471-2164-13-73

Christie-Oleza, Joseph Alexander, Pina-Villalonga, J. M., Bosch, R., Nogales, B. and Armengaud, J. (2012) Comparative proteogenomics of twelve roseobacter exoproteomes reveals different adaptive strategies among these marine bacteria. Molecular & Cellular Proteomics, Volume 11 (Number 2). Article number M111.013110. doi:10.1074/mcp.M111.013110

Clark, Corinna C. A., Gruffydd-Jones, Timothy and Murray, Jane K. (2012) Number of cats and dogs in UK welfare organisations. Veterinary Record, 170 (19). p. 493. doi:10.1136/vr.100524

Clarkson, John P., Coventry, E., Kitchen, James, Carter, H. E. and Whipps, J. M. (2012) Population structure of Sclerotinia sclerotiorum in crop and wild hosts in the UK. Plant Pathology, Volume 62 (Number 2). pp. 309-324. doi:10.1111/j.1365-3059.2012.02635.x

Coelho, Paula S., Vicente, Joana G., Monteiro, António A. and Holub, E. B. (2012) Pathotypic diversity of Hyaloperonospora brassicae collected from Brassica oleracea. European Journal of Plant Pathology, Vol.134 (No.4). pp. 763-771. doi:10.1007/s10658-012-0052-z

Collins-Hooper, Henry, Woolley, Thomas E., Dyson, Louise, Patel, Anand, Potter, Paul, Baker, Ruth E., Gaffney, Eamonn A., Maini, Philip K., Dash, Philip R. and Patel, Ketan (2012) Age-related changes in speed and mechanism of adult skeletal muscle stem cell migration. Stem Cells, 30 (6). pp. 1182-1195. doi:10.1002/stem.1088

Cope, G. F., Wu, Houdini Ho Tin, O'Donovan, G. V. and Milburn, H. J. (2012) A new point of care cotinine test for saliva to identify and monitor smoking habit. European Respiratory Journal, Volume 40 (Number 2). pp. 496-497. doi:10.1183/09031936.00219011

Corrêa, Sônia A. L. and Eales, Katherine L. (2012) The role of p38 MAPK and its substrates in neuronal plasticity and neurodegenerative disease. Journal of Signal Transduction, Vol.2012 . Article no. 649079. doi:10.1155/2012/649079

Corrêa, Sônia A. L., Hunter, Christopher J., Palygin, Oleg, Wauters, Sandrine, Martin, Kirsty J., McKenzie, Colin, McKelvey, Kim M. (Kim Martin), Morris, R. G. M. (Richard G. M.), Pankratov, Yuriy, Arthur, J. Simon C. and Frenguelli, Bruno G. (2012) MSK1 regulates homeostatic and experience-dependent synaptic plasticity. Journal of Neuroscience, Vol.32 (No.38). pp. 13039-13051. doi:10.1523/JNEUROSCI.0930-12.2012

Costa, Liliana M., Yuan, Jing, Rouster, Jacques, Paul, Wyatt, Dickinson, Hugh and Gutierrez-Marcos, José F. (2012) Maternal control of nutrient allocation in plant seeds by genomic imprinting. Current Biology, Vol.22 (No.2). pp. 160-165. doi:10.1016/j.cub.2011.11.059

Cox, Michael J., Schäfer, Hendrik, Nightingale, Phillip D., McDonald, Ian R. and Murrell, J. C. (J. Colin) (2012) Diversity of methyl halide-degrading microorganisms in oceanic and coastal waters. FEMS Microbiology Letters, Vol.334 (No.2). pp. 111-118. doi:10.1111/j.1574-6968.2012.02624.x

Crow, Allister, Hughes, R. K., Taieb, F., Oswald, E. and Banfield, M. J. (2012) The molecular basis of ubiquitin-like protein NEDD8 deamidation by the bacterial effector protein Cif. Proceedings of the National Academy of Sciences of the United States of America, 109 (27). E1830-E1838. doi:10.1073/pnas.1112107109

Dale, Nicholas (2012) A classic review on extracellular ATP and its signalling functions that helped to define the field's agenda for many years. Biochemical Journal, Volume 2012 (Number 1). c3-c6. doi:10.1042/BJ20121145

Dale, Nicholas and Frenguelli, Bruno G. (2012) Measurement of purine release with microelectrode biosensors. Purinergic Signalling, Vol.8 (No.S1). pp. 27-40. doi:10.1007/s11302-011-9273-4

Danon, Leon, House, Thomas A., Read, Jonathan M. and Keeling, Matthew James (2012) Social encounter networks : collective properties and disease transmission. Journal of The Royal Society Interface, Vol.9 (No.76). pp. 2826-2833. doi:10.1098/rsif.2012.0357

Davies, Oluwafemi, Mendes, Pedro, Smallbone, Kieran and Malys, Naglis (2012) Characterisation of multiple substrate-specific (d)ITP/(d)XTPase and modelling of deaminated purine nucleotide metabolism. BMB Reports , Vol.45 (No.4). pp. 259-264. doi:10.5483/BMBRep.2012.45.4.259

Denecke, J., Aniento, F., Frigerio, Lorenzo, Hawes, C., Hwang, I., Mathur, J., Neuhaus, J.-M. and Robinson, D. G. (2012) Secretory pathway research : the more experimental systems the better. The Plant Cell, Volume 24 (Number 4). pp. 1316-1326. doi:10.1105/tpc.112.096362

Dickinson, Hugh, Costa, Liliana and Gutierrez-Marcos, José F. (2012) Epigenetic neofunctionalisation and regulatory gene evolution in grasses. Trends in Plant Science, Vol.17 (No.7). pp. 389-394. doi:10.1016/j.tplants.2012.04.002

Didelot, Xavier, Bowden, Rory, Wilson, Daniel J., Peto, Tim E. A. and Crook, Derrick W. (2012) Transforming clinical microbiology with bacterial genome sequencing. Nature Reviews Genetics , 13 (9). pp. 601-612. doi:10.1038/nrg3226

(2012) Microevolutionary analysis of Clostridium difficile genomes to investigate transmission. Genome Biology, 13 (12). R118. doi:10.1186/gb-2012-13-12-r118

Didelot, Xavier, Méric, Guillaume, Falush, Daniel and Darling, Aaron E (2012) Impact of homologous and non-homologous recombination in the genomic evolution of Escherichia coli. BMC Genomics, 13 (1). p. 256. doi:10.1186/1471-2164-13-256

Dimmock, N. J., Dove, Brian K., Meng, Bo, Scott, P. D. (Paul D.), Taylor, Irene, Cheung, Linda, Hallis, Bassam, Marriott, Anthony C., Carroll, Miles W. and Easton, A. J. (Andrew J.) (2012) Comparison of the protection of ferrets against pandemic 2009 influenza A virus (H1N1) by 244 DI influenza virus and oseltamivir. Antiviral Research, Vol.96 (No.3). pp. 376-385. doi:10.1016/j.antiviral.2012.09.017

Dimmock, N. J., Dove, Brian K., Scott, P. D. (Paul D.), Meng, Bo, Taylor, Irene, Cheung, Linda, Hallis, Bassam, Marriott, Anthony C., Carroll, Miles W. and Easton, A. J. (Andrew J.) (2012) Cloned defective interfering influenza virus protects ferrets from pandemic 2009 influenza A virus and allows protective immunity to be established. PLoS ONE, Vol.7 (No.12). e49394. doi:10.1371/journal.pone.0049394

Dingle, Kate E., Didelot, Xavier, Ansari, M. Azim, Eyre, David W., Vaughan, Alison, Griffiths, David, Ip, Camilla L. C., Batty, Elizabeth M., Golubchik, Tanya, Bowden, Rory, Jolley, Keith A., Hood, Derek W., Fawley, Warren N., Walker, A. Sarah, Peto, Timothy E., Wilcox, Mark H. and Crook, Derrick W. (2012) Recombinational switching of the Clostridium difficile S-Layer and a novel glycosylation gene cluster revealed by large-scale whole-genome sequencing. The Journal of Infectious Diseases, 207 (4). pp. 675-686. doi:10.1093/infdis/jis734

Ditchfield, A. K., Wilson, S. T., Hart, M. C., Purdy, Kevin J., Green, D. H. and Hatton, A. D. (2012) Identification of putative methylotrophic and hydrogenotrophic methanogens within sedimenting material and copepod faecal pellets. Aquatic Microbial Ecology, Vol.67 (No.2). pp. 151-160. doi:10.3354/ame01585

Dixon, Neil, Robinson, Christopher J., Geerlings, Torsten, Duncan, John, Drummond, Sheona P. and Micklefield, Jason (2012) Orthogonal riboswitches for tuneable coexpression in bacteria. Angewandte Chemie International Edition, 51 (15). pp. 3620-3624. doi:10.1002/anie.201109106

Dove, Andrew P. (2012) Organic catalysis for ring-opening polymerization. ACS Macro Letters, Vol.1 (No.12). pp. 1409-1412. doi:10.1021/mz3005956

Edgar, J. L., Nicol, C. J., Clark, Corinna C. A. and Paul, E. S. (2012) Measuring empathic responses in animals. Applied Animal Behaviour Science, 138 (3-4). pp. 182-193. doi:10.1016/j.applanim.2012.02.006

Eichmann, Ruth and Schäfer, P. (Patrick) (2012) The endoplasmic reticulum in plant immunity and cell death. Frontiers in Plant Science, Volume 3 . Article number 200. doi:10.3389/fpls.2012.00200

Ernst, A. M., Jekat, S. B., Zielonka, S., Muller, B., Neumann, U., Ruping, B., Twyman, R. M., Krzyzanek, V., Prufer, D. and Noll, G. A. (2012) Sieve element occlusion (SEO) genes encode structural phloem proteins involved in wound sealing of the phloem. Proceedings of the National Academy of Sciences of the United States of America, Volume 109 (Number 28). E1980-E1989. doi:10.1073/pnas.1202999109

Evans, Jennifer S., Horton, Daniel L., Easton, A. J. (Andrew J.), Fooks, Anthony R. and Banyard, Ashley C. (2012) Rabies virus vaccines : is there a need for a pan-lyssavirus vaccine? Vaccine, Vol.30 (No.52). pp. 7447-7454. doi:10.1016/j.vaccine.2012.10.015

(2012) A pilot study of rapid benchtop sequencing of Staphylococcus aureusand Clostridium difficilefor outbreak detection and surveillance. BMJ Open, 2 (3). e001124. doi:10.1136/bmjopen-2012-001124

Fan, Jun, Mohareb, Fady, Jones, Alexandra M. and Bessant, Conrad (2012) MRMaid : the SRM assay design tool for Arabidopsis and other species. Frontiers in Plant Science, Volume 3 . Article number 164. doi:10.3389/fpls.2012.00164

Farre, Gemma, Naqvi, Shaista, Sanahuja, Georgina, Bai, Chao, Zorrilla-López, Uxue, Rivera, Sol M., Canela, Ramon, Sandman, Gerhard, Twyman, Richard M., Capell, Teresa, Zhu, Changfu and Christou, Paul (2012) Combinatorial genetic transformation of cereals and the creation of metabolic libraries for the carotenoid pathway. Methods in Molecular Biology, Vol.847 . pp. 419-435. doi:10.1007/978-1-61779-558-9_33

Finch, Stanley and Collier, Rosemary (2012) The influence of host and non-host companion plants on the behaviour of pest insects in field crops. Entomologia Experimentalis et Applicata, Vol.142 (No.2). pp. 87-96. doi:10.1111/j.1570-7458.2011.01191.x

Finch-Savage, William E. and Footitt, Steven (2012) To germinate or not to germinate : a question of dormancy relief not germination stimulation. Seed Science Research, Vol.22 (No.4). pp. 243-248. doi:10.1017/S0960258512000165

Fischer, Rainer, Schillberg, Stefan, Hellwig, Stephan, Twyman, Richard M. and Drossard, Juergen (2012) GMP issues for recombinant plant-derived pharmaceutical proteins. Biotechnology Advances, Vol.30 (No.2). pp. 434-439. doi:10.1016/j.biotechadv.2011.08.007

Fita, Ana, Bowen, Helen C., Hayden, Rory M., Nuez, F., Picó, Belén and Hammond, John P. (2012) Diversity in expression of phosphorus (P) responsive genes in Cucumis Melo L. PLoS One, Vol.7 (No.4). Article no. e35387. doi:10.1371/journal.pone.0035387

Foddai, Alessandro, Green, Laura E., Mason, Sam A. and Kaler, Jasmeet (2012) Evaluating observer agreement of scoring systems for foot integrity and footrot lesions in sheep. BMC Veterinary Research, Volume 8 (Number 1). Article number 65. doi:10.1186/1746-6148-8-65

Forrest, Michael D., Wall, Mark J., Press, Daniel A. and Feng, Jianfeng (2012) The sodium-potassium pump controls the intrinsic firing of the cerebellar Purkinje neuron. PLoS ONE, Vol.7 (No.12). e51169. doi:10.1371/journal.pone.0051169

Fu, Yong-Bi, Diederichsen, Axel and Allaby, Robin G. (2012) Locus-specific view of flax domestication history. Ecology and Evolution, Vol.2 (No.1). pp. 139-152. doi:10.1002/ece3.57

Fullam, Elizabeth, Pojer, Florence, Bergfors, Terese, Jones, T. Alwyn and Cole, Stewart T. (2012) Structure and function of the transketolase from Mycobacterium tuberculosis and comparison with the human enzyme. Open Biology, Volume 2 (110026). Article number 110026. doi:10.1098/rsob.110026

Fuller, Dorian Q., Willcox, G. and Allaby, Robin G. (2012) Early agricultural pathways : moving outside the 'core area' hypothesis in Southwest Asia. Journal of Experimental Botany, Vol.63 (No.2). pp. 617-633. doi:10.1093/jxb/err307

Fussi, Barbara, Bonello, Joseph, Calleja, Eman J. and Heinze, Berthold (2012) Combining the use of molecular techniques and archival documentary evidence to trace the origin of Populus alba in a Central Mediterranean archipelago. European Journal of Forest Research, Vol. 131 (No. 2). pp. 347-354. doi:10.1007/s10342-011-0506-4

Giacomucci, L., Purdy, Kevin J., Zanardini, E., Polo, A. and Cappitelli, F. (2012) A new non-degenerate primer pair for the specific detection of the nitrite reductase gene nrfA in the genus desulfovibrio. Journal of Molecular Microbiology and Biotechnology, Volume 22 (Number 6). pp. 345-351. doi:10.1159/000345768

Gonzalez-Guzman, Miguel, Pizzio, Gaston A., Antoni, Regina, Vera-Sirera, Francisco, Merilo, Ebe, Bassel, George, Fernández, Maria A., Holdsworth, Michael J., Perez-Amador, Miguel Angel, Kollist, Hannes and Rodriguez, Pedro L. (2012) Arabidopsis PYR/PYL/RCAR receptors play a major role in quantitative regulation of stomatal aperture and transcriptional response to Abscisic Acid. The Plant Cell, 24 (6). pp. 2483-2496. doi:10.1105/tpc.112.098574

Green, Laura E., Carrique-Mas, J. J., Mason, S. A. (Sam A.) and Medley, Graham (2012) Patterns of delayed detection and persistence of bovine tuberculosis in confirmed and unconfirmed herd breakdowns in cattle and cattle herds in Great Britain. Preventive Veterinary Medicine, Volume 106 (Number 3-4). pp. 266-274. doi:10.1016/j.prevetmed.2012.04.008

Green, Laura E., Kaler, J., Wassink, G. J., King, Elisabeth M. and Grogono Thomas, R. (2012) Impact of rapid treatment of sheep lame with footrot on welfare and economics and farmer attitudes to lameness in sheep. Animal Welfare, 21 (Supplement 1). pp. 65-71. doi:10.7120/096272812X13345905673728

Greer, E., Martin, A. C., Pendle, A., Colas, I., Jones, Alexandra M., Moore, G. and Shaw, P. (2012) The Ph1 locus suppresses Cdk2-type activity during premeiosis and meiosis in wheat. The Plant Cell, Volume 24 (Number 1). pp. 152-162. doi:10.1105/tpc.111.094771

Groscurth, Sira, Müller, Boje, Schwan, Stefan, Menzel, Matthias, Diekstall, Franziska, Senft, Matthias, Kendall, Amy, Kommor, Boris A., Neumann, Ulla, Kalischuk, Melanie, Kawchuk, Lawrence M., Krzyzanek, Vladislav, Heilmann, Andreas, Stubbs, Gerald, Twyman, Richard M., Prüfer, Dirk and Noll, Gundula A. (2012) Artificial Forisomes Are Ideal Models of Forisome Assembly and Activity That Allow the Development of Technical Devices. Biomacromolecules, Vol. 13 (No. 10). pp. 3076-3086. doi:10.1021/bm3008499

Grønlund, Jesper T., Eyres, Alison, Kumar, Sanjeev, Buchanan-Wollaston, Vicky and Gifford, Miriam L. (2012) Cell specific analysis of Arabidopsis leaves using fluorescence activated cell sorting. Journal of Visualized Experiments (No.68). e4214. doi:10.3791/4214

Gutierrez-Marcos, José F., Constância, M. and Burton, G. J. (2012) Maternal to offspring resource allocation in plants and mammals. Placenta, Volume 33 . e3-e10. doi:10.1016/j.placenta.2012.08.006

Gutierrez-Marcos, José F. and Dickinson, H. G. (2012) Epigenetic reprogramming in plant reproductive lineages. Plant and Cell Physiology, Volume 53 (Number 5). pp. 817-823. doi:10.1093/pcp/pcs052

Göhre, Vera, Jones, Alexandra M., Sklenář, Jan, Robatzek, Silke and Weber, Andreas P. M. (2012) Molecular crosstalk between PAMP-triggered immunity and photosynthesis. Molecular Plant-Microbe Interactions, Volume 25 (Number 8). pp. 1083-1092. doi:10.1094/MPMI-11-11-0301

Hackenberg, Dieter, Keetman, Ulrich and Grimm, Bernhard (2012) Homologous NF-YC2 subunit from arabidopsis and tobacco is activated by photooxidative stress and induces flowering. International Journal of Molecular Sciences, 13 (3). pp. 3458-3477. doi:10.3390/ijms13033458

Hackenberg, Dieter, Wu, Yanfang, Voigt, Andrea, Adams, Robert, Schramm, Peter and Grimm, Bernhard (2012) Studies on differential nuclear translocation mechanism and assembly of the three subunits of the arabidopsis thaliana transcription factor NF-Y. Molecular Plant, 5 (4). pp. 876-888. doi:10.1093/mp/ssr107

Hammitt, L. L., Kazungu, S., Morpeth, S. C., Gibson, D. G., Mvera, B., Brent, A. J., Mwarumba, S., Onyango, C. O., Bett, A., Akech, D. O., Murdoch, D. R., Nokes, D. James and Scott, J. A. G. (2012) A preliminary study of pneumonia etiology among hospitalized children in Kenya. Clinical Infectious Diseases, Vol.54 (Suppl.2). S190-S199. doi:10.1093/cid/cir1071

Hancock, Penelope A. and Godfray, H. Charles J. (2012) Modelling the spread of Wolbachia in spatially heterogeneous environments. Journal of The Royal Society Interface, Vol.9 (No.76). pp. 3045-3054. doi:10.1098/rsif.2012.0253

Harrison, Freya (2012) Bacterial cooperation in the wild and in the clinic : are pathogen social behaviours relevant outside the laboratory? BioEssays, 35 (2). pp. 108-112. doi:10.1002/bies.201200154

Hartmann, Manuela, Grob, Carolina, Tarran, Glen A., Martin, Adrian P., Burkill, Peter H., Scanlan, David J. and Zubkov, Mikhail V. (2012) Mixotrophic basis of Atlantic oligotrophic ecosystems. Proceedings of the National Academy of Sciences, Volume 109 (Number 15). pp. 5756-5760. doi:10.1073/pnas.1118179109

Harvey, David J., Scarff, Charlotte A., Crispin, Max, Scanlan, Christopher N., Bonomelli, Camille and Scrivens, James H. (2012) MALDI-MS/MS with traveling wave ion mobility for the structural analysis of N-Linked glycans. Journal of The American Society for Mass Spectrometry, Vol.23 (No.11). pp. 1955-1966. doi:10.1007/s13361-012-0425-8

(2012) Whole-Genome Sequence of Corynebacterium pseudotuberculosis Strain Cp162, Isolated from Camel. Journal of Bacteriology, Vol. 194 (No. 20). pp. 5718-5719. doi:10.1128/JB.01373-12

Heal, Jack W., Jiménez Roldán, J. E. (José Emilio), Wells, Stephen A., Freedman, R. B. and Römer, Rudolf A. (2012) Inhibition of HIV-1 protease: the rigidity perspective. Bioinformatics, Vol.28 (No.3). pp. 350-357. doi:10.1093/bioinformatics/btr683

Hebenstreit, Daniel (2012) Methods, challenges and potentials of single cell RNA-seq. Biology, Volume 1 (Number 3). pp. 658-667. doi:10.3390/biology1030658

Hebenstreit, Daniel, Deonarine, Andrew, Babu, M. Madan and Teichmann, Sarah A. (2012) Duel of the fates: the role of transcriptional circuits and noise in CD4+ cells. Current Opinion in Cell Biology, Vol. 24 (No. 3). pp. 350-358. doi:10.1016/j.ceb.2012.03.007

Hills, Claire E., Bland, Rosemary and Squires, Paul E. (2012) Functional expression of TRPV4 channels in human collecting duct cells : implications for secondary hypertension in diabetic nephropathy. Experimental Diabetes Research, 2012 . p. 936518. doi:10.1155/2012/936518

Hills, Claire E., Siamantouras, Eleftherios, Smith, S. W., Cockwell, Paul, Liu, Kuo-Kang and Squires, Paul E. (2012) TGFβ modulates cell-cell communication in early epithelial-to-mesenchymal transition. Diabetologia, Vol.55 (No.3). pp. 812-824. doi:10.1007/s00125-011-2409-9

Hills, Claire E., Younis, Mustafa Y. G., Bennett, Jeanette, Siamantouras, Eleftherios, Liu, Kuo-Kang and Squires, Paul E. (2012) Calcium-sensing receptor activation increases cell-cell adhesion and ß-cell function. Cellular Physiology and Biochemistry, Vol.30 (No.3). pp. 575-586. doi:10.1159/000341439

Hino, Tomoya, Arakawa, Takatoshi, Iwanari, Hiroko, Yurugi-Kobayashi, Takami, Ikeda-Suno, Chiyo, Nakada-Nakura, Yoshiko, Kusano-Arai, Osamu, Weyand, Simone, Shimamura, Tatsuro, Nomura, Norimichi, Cameron, Alexander, Kobayashi, Takuya, Hamakubo, Takao, Iwata, So and Murata, Takeshi (2012) G-protein-coupled receptor inactivation by an allosteric inverse-agonist antibody. Nature, Vol. 482 . pp. 237-240. doi:10.1038/nature10750

Hollingsworth, T. Déirdre (2012) Mathematics matters. Science in Parliament, 69 (2). pp. 21-25.

Hosek, P., Kubes, M., ankova, M., Dobrev, P. I., Klíma, P., Kohoutova, M., Petrasek, J., Hoyerova, K., Jirina, M. and Zazimalova, E. (2012) Auxin transport at cellular level : new insights supported by mathematical modelling. Journal of Experimental Botany, 63 (10). pp. 3815-3827. doi:10.1093/jxb/ers074

House, Thomas A., Inglis, Nadia, Ross, Joshua V., Wilson, Fay, Suleman, Shakeel, Edeghere, Obaghe, Smith, Gillian, Olowokure, Babatunde and Keeling, Matthew James (2012) Estimation of outbreak severity and transmissibility : influenza A(H1N1)pdm09 in households. BMC Medicine, Vol.10 (No.1). p. 117. doi:10.1186/1741-7015-10-117

Houton, Kelly A., Morris, Kyle L., Chen, Lin, Schmidtmann, Marc, Jones, James T. A., Serpell, Louise C., Lloyd, Gareth O. and Adams, Dave J. (2012) On crystal versus fiber Formation in dipeptide hydrogelator systems. Langmuir, 28 (25). pp. 9797-9806. doi:10.1021/la301371q

Hung, Wei-Lian, Wade, William G, Chen, Yin, Kelly, Donovan P. and Wood, Ann P (2012) Design and evaluation of novel primers for the detection of genes encoding diverse enzymes of methylotrophy and autotrophy. Polish Journal of Microbiology, Vol.61 (No.1). pp. 11-22.

Huntley, Selene J., Cooper, Selin, Bradley, Andrew J. and Green, Laura E. (2012) A cohort study of the associations between udder conformation, milk somatic cell count, and lamb weight in suckler ewes. Journal of Dairy Science, Vol.95 (No.9). pp. 5001-5010. doi:10.3168/jds.2012-5369

Iacobini, Greg, Porter, David and Shipman, Michael (2012) Chemo- and enantioselective Rh-catalysed hydrogenation of 3-methylene-1,2-diazetidines: application to vicinal diamine synthesis. Chemical Communications, Vol. 48 (No. 79). p. 9852. doi:10.1039/c2cc35445d

Iqbal, Mudassar, Mast, Yvonne, Amin, Rafat, Hodgson, D. A., Wohlleben, W. and Burroughs, Nigel John (2012) Extracting regulator activity profiles by integration of de novo motifs and expression data : characterizing key regulators of nutrient depletion responses in Streptomyces coelicolor. Nucleic Acids Research, Vol.40 (No.12). pp. 5227-5239. doi:10.1093/nar/gks205

Irwin, Judith A., Lister, Clare, Soumpourou, Eleni, Zhang, Yanwen, Howell, Elaine C., Teakle, Graham R. and Dean, Caroline (2012) Functional alleles of the flowering time regulator FRIGIDA in the Brassica oleracea genome. BMC Plant Biology, Vol.12 (No.1). p. 21. doi:10.1186/1471-2229-12-21

Iwata, M., Lee, Y., Yamashita, T., Yagi, T., Iwata, So, Cameron, Alexander and Maher, M. J. (2012) The structure of the yeast NADH dehydrogenase (Ndi1) reveals overlapping binding sites for water- and lipid-soluble substrates. Proceedings of the National Academy of Sciences, Vol. 109 (No. 38). pp. 15247-15252. doi:10.1073/pnas.1210059109

Jackson, Stephen D. and Hong, Yiguo (2012) Systemic movement of FT mRNA and a possible role in floral induction. Frontiers in Plant Science, Vol.3 . doi:10.3389/fpls.2012.00127

Jahangiri, Leila, Nelson, A. C. and Wardle, Fiona C. (2012) A cis-regulatory module upstream of deltaC regulated by Ntla and Tbx16 drives expression in the tailbud, presomitic mesoderm and somites. Developmental Biology, 371 (1). pp. 110-120. doi:10.1016/j.ydbio.2012.07.002

Jeziorska, Danuta M., Koentges, Georgy and Vance, K. W. (2012) Novel cis-regulatory modules control expression of the hairy and enhancer of split-1 (HES1) transcription factor in myoblasts. Journal of Biological Chemistry, Vol.287 (No.8). pp. 5687-5697. doi:10.1074/jbc.M111.286484

Jiang, Suzhen, Yang, Ziwei, Li, Weijie, Li, Xiaojun, Wang, Yongfeng, Zhang, Jiangbo, Xu, Chunhui, Chen, Pei-Jer, Hou, Jinlin, McCrae, Malcolm A., Chen, Xiangmei, Zhuang, Hui and Lu, Fengmin (2012) Re-evaluation of the carcinogenic significance of hepatitis B virus integration in hepatocarcinogenesis. PLoS One, Vol.7 (No.9). e40363. doi:10.1371/journal.pone.0040363

(2012) The HUPO initiative on model organism proteomes, iMOP. Proteomics, Volume 12 (Number 3). pp. 340-345. doi:10.1002/pmic.201290014

Joseph, Sandeep J., Didelot, Xavier, Rothschild, James, de Vries, Henry J.C., Morré, Servaas A., Read, Timothy D. and Dean, Deborah (2012) Population genomics of Chlamydia trachomatis : insights on drift, selection, recombination, and population structure. Molecular Biology and Evolution, 29 (12). pp. 3933-3946. doi:10.1093/molbev/mss198

Kaler, Jasmeet, Wani, S. A., Hussain, I., Beg, S. A., Makhdoomi, M., Kabli, Z. A. and Green, Laura E. (2012) A clinical trial comparing parenteral oxytetracyline and enrofloxacin on time to recovery in sheep lame with acute or chronic footrot in Kashmir, India. BMC Veterinary Research, Vol.8 (No.1). Article no. 12. doi:10.1186/1746-6148-8-12

Kaszuba, Karol, Róg, Tomasz, Danne, Reinis, Canning, Peter, Fülöp, Vilmos, Juhász, Tünde, Szeltner, Zoltán, St. Pierre, J.-F., García-Horsman, Arturo, Männistö, Pekka T., Karttunen, Mikko, Hokkanen, Jyrki and Bunker, Alex (2012) Molecular dynamics, crystallography and mutagenesis studies on the substrate gating mechanism of prolyl oligopeptidase. Biochimie, Vol.94 (No.6). pp. 1398-1411. doi:10.1016/j.biochi.2012.03.012

Keeling, Matthew James and Shattock, Andrew (2012) Optimal but unequitable prophylactic distribution of vaccine. Epidemics, Vol.4 (No.2). pp. 78-85. doi:10.1016/j.epidem.2012.03.001

Keir, L., Richards, A., Spooner, Robert A. , Welsh, G., Coward, R. and Saleem, M. (2012) Understanding the renal pathogenesis of diarrhoea-associated haemolytic uraemic syndrome (D+HUS) : the role of the podocyte. Archives of Disease in Childhood, Volume 97 (Suppementl 1). A158-A159. doi:10.1136/archdischild-2012-301885.372

Keith, Aidan. M., Boots, Bas, Hazard, Christina, Niechoj, Robin, Arroyo, Julio, Bending, G. D., Bolger, Tom, Breen, John, Clipson, Nicholas, Doohan, Fiona M., Griffin, Christine T. and Schmidt, Olaf (2012) Cross-taxa congruence, indicators and environmental gradients in soils under agricultural and extensive land management. European Journal of Soil Biology, Vol.49 . pp. 55-62. doi:10.1016/j.ejsobi.2011.08.002

Kerr, Gary W., Sarkar, Sourav and Arumugam, Prakash (2012) How to halve ploidy : lessons from budding yeast meiosis. Cellular and Molecular Life Sciences, Volume 69 (Number 18). pp. 3037-3051. doi:10.1007/s00018-012-0974-9

Khan, Imran, Twyman, Richard M., Arcalis, Elsa and Stoger, Eva (2012) Using storage organelles for the accumulation and encapsulation of recombinant proteins. Biotechnology Journal, Vol.7 (No.9). pp. 1099-1108. doi:10.1002/biot.201100089

Khatabi, Behnam, Molitor, Alexandra, Lindermayr, Christian, Pfiffi, Stefanie, Durner, Jörg, Wettstein, Diter von, Kogel, Karl-Heinz and Schäfer, Patrick (2012) Ethylene supports colonization of plant roots by the mutualistic fungus Piriformospora indica. PLoS One, Volume 7 (Number 4). Article number e35502. doi:10.1371/journal.pone.0035502

Khatabi, Behnam and Schäfer, Patrick (2012) Ethylene in mutualistic symbioses. Plant Signaling & Behavior, Volume 7 (Number 12). pp. 1634-1638. doi:10.4161/psb.22471

Kilbride, A. L. (Amy L.), Mason, Sam, Honeyman, P. C., Pritchard, D. G., Hepple, S. and Green, Laura E. (2012) Associations between membership of farm assurance and organic certification schemes and compliance with animal welfare legislation. Veterinary Record, Vol.170 (No.6). p. 152. doi:10.1136/vr.100345

Kilbride, A. L. (Amy L.), Mendl, M. (Michael), Statham, P., Held, S., Harris, M., Cooper, Selin and Green, Laura E. (2012) A cohort study of preweaning piglet mortality and farrowing accommodation on 112 commercial pig farms in England. Preventive Veterinary Medicine, Vol.104 (No.3-4). pp. 281-291. doi:10.1016/j.prevetmed.2011.11.011

Kirsten, Holger, Wilcke, Arndt, Ligges, Carolin, Boltze, Johannes and Ahnert, Peter (2012) Association study of a functional genetic variant in KIAA0319 in German dyslexics. Psychiatric Genetics, 22 (4). pp. 216-217. doi:10.1097/YPG.0b013e32834c0c97

Kitchen, James and Allaby, Robin G. (2012) The limits of mean-field heterozygosity estimates under spatial extension in simulated plant populations. PLoS ONE, Vol.7 (No.8). e43254. doi:10.1371/journal.pone.0043254

Kitchen, James, Moore, Jonathan D., Palmer, Sarah A. and Allaby, Robin G. (2012) MCMC-ODPR : primer design optimization using Markov Chain Monte Carlo sampling. BMC Bioinformatics, Vol.13 (No.1). p. 287. doi:10.1186/1471-2105-13-287

(2012) Guidelines for the use and interpretation of assays for monitoring autophagy. Autophagy, Vol.8 (No.4). pp. 445-544. doi:10.4161/auto.19496

Klyuch, Boris P., Dale, Nicholas and Wall, Mark J. (2012) Deletion of ecto-5'-nucleotidase (CD73) reveals direct action potential-dependent adenosine release. Journal of Neuroscience, Vol.32 (No.11). pp. 3842-3847. doi:10.1523/JNEUROSCI.6052-11.2012

Klyuch, Boris P., Dale, Nicholas and Wall, Mark J. (2012) Receptor-mediated modulation of activity-dependent adenosine release in rat cerebellum. Neuropharmacology, Vol.62 (No.2). pp. 815-824. doi:10.1016/j.neuropharm.2011.09.007

Kneafsey, Moya, Dowler, Elizabeth, Lambie-Mumford, Hannah, Inman, Alex and Collier, Rosemary (2012) Consumers and food security : uncertain or empowered? Journal of Rural Studies . pp. 101-112. doi:10.1016/j.jrurstud.2012.05.005

Kolling, J., Langenkamper, D., Abouna, S., Khan, Michael and Nattkemper, Tim W. (2012) WHIDE--a web tool for visual data mining colocation patterns in multivariate bioimages. Bioinformatics, Vol.28 (No.8). pp. 1143-1150. doi:10.1093/bioinformatics/bts104

Kolling, J., Langenkamper, D., Abouna, Sylvie, Khan, Michael and Nattkemper, T. W. (2012) WHIDE - a web tool for visual data mining colocation patterns in multivariate bioimages. Bioinformatics, 28 (8). pp. 1143-1150. doi:10.1093/bioinformatics/bts104

Koncsag, Claudia I., Eastwood, Daniel C., Collis, Alana, Coles, Stuart R., Clark, Andrew J., Kirwan, Kerry and Burton, Kerry S. (2012) Extracting valuable compounds from straw degraded by Pleurotus ostreatus. Resources, Conservation and Recycling, Vol.59 . pp. 14-22. doi:10.1016/j.resconrec.2011.04.007

Kondrat, Frances D. L., Kowald, Gregory R., Scarff, Charlotte A., Scrivens, James H. and Blindauer, Claudia A. (2012) Resolution of a paradox by native mass spectrometry : facile occupation of all four metal binding sites in the dimeric zinc sensor SmtB. Chemical Communications, Volume 49 (Number 8). pp. 813-815. doi:10.1039/c2cc38387j

Koulintchenko, Milana, Vengrova, Sonya, Eydmann, Trevor, Arumugam, Prakash and Dalgaard, Jacob Z. (2012) DNA polymerase α (swi7) and the flap endonuclease fen1 (rad2) act together in the s-phase alkylation damage response in S. pombe. PLoS One, Vol.7 (No.10). e47091. doi:10.1371/journal.pone.0047091

Kubes, M., Yang, H., Richter, G. L., Cheng, Y., Mlodzinska, E., Wang, X., Blakeslee, J. J., Carraro, N., Petrasek, J., Zazimalova, E., Hoyerova, K., Peer, W. A. and Murphy, A. S. (2012) The Arabidopsis concentration-dependent influx/efflux transporter ABCB4 regulates cellular auxin levels in the root epidermis. The Plant Journal, 69 (4). pp. 640-654. doi:10.1111/j.1365-313X.2011.04818.x

Kuse, Manohar, Wang, Yi-Fang, Kalasannavar, V, Khan, Michael and Rajpoot, Nasir M. (Nasir Mahmood) (2012) Local isotropic phase symmetry measure for detection of beta cells and lymphocytes. Journal of Pathology Informatics, Vol.2 (No.2). doi:10.4103/2153-3539.92028

Kuwahara, Hiroyuki and Soyer, Orkun S. (2012) Bistability in feedback circuits as a byproduct of evolution of evolvability. Molecular Systems Biology, Volume 8 (Number 564). Article no. 564. doi:10.1038/msb.2011.98

Lagator, Mato, Vogwill, Tom, Colegrave, Nick and Neve, Paul (2012) Herbicide cycling has diverse effects on evolution of resistance in Chlamydomonas reinhardtii. Evolutionary Applications, Vol.6 (No.2). pp. 197-206. doi:10.1111/j.1752-4571.2012.00276.x

Laskaris, Paris, Sekine, Takuya and Wellington, E. M. H. (2012) Diversity analysis of Streptomycetes and associated phosphotranspherase genes in soil. PLoS ONE, Vol.7 (No.4). e35756. doi:10.1371/journal.pone.0035756

Lavagi, Irene, Estelle, Mark, Weckwerth, Wolfram, Beynon, Jim and Bastow, Ruth (2012) From bench to bountiful harvests : a road map for the next decade of Arabidopsis research. The Plant Cell, Vol.24 (No.6). pp. 2240-2247. doi:10.1105/tpc.112.096982

Leach, K.A., Tisdall, D.A., Bell, N.J., Main, D.C.J. and Green, Laura E. (2012) The effects of early treatment for hindlimb lameness in dairy cows on four commercial UK farms. The Veterinary Journal, Vol. 193 (No. 3). pp. 626-632. doi:10.1016/j.tvjl.2012.06.043

Lee, Hannah, Ph.D., Sparkes, Imogen, Gattolin, Stefano, Dzimitrowicz, Natasha, Roberts, L. M. (Lynne M.), Hawes, C. R. and Frigerio, Lorenzo (2012) An Arabidopsis reticulon and the atlastin homologue RHD3-like2 act together in shaping the tubular endoplasmic reticulum. New Phytologist, Volume 197 (Number 2). pp. 481-489. doi:10.1111/nph.12038

Lehtonen, Eero and Woodland, Hugh R. (2012) The 40th anniversary issue of Differentiation—Cilia in development, differentiation and disease. Differentiation, Vol.83 (No.2). S1-S3. doi:10.1016/j.diff.2011.12.001

Leonelli, Sabina, Charnley, Berris, Webb, Alex R. and Bastow, Ruth (2012) Under one leaf : an historical perspective on the UK Plant Science Federation. New Phytologist, Vol.195 (No.1). pp. 10-13. doi:10.1111/j.1469-8137.2012.4168.x

Leung, Brian, Roura-Pascual, Nuria, Bacher, Sven, Heikkilä, Jaakko, Brotons, Lluis, Burgman, Mark A., Dehnen-Schmutz, Katharina, Essl, Franz, Hulme, Philip E., Richardson, David M., Sol, Daniel and Vilà, Montserrat (2012) TEASIng apart alien species risk assessments : a framework for best practices. Ecology Letters, Vol.15 (No.12). pp. 1475-1493. doi:10.1111/ele.12003

Li, Shuyu, Spooner, Robert A. , Hampton, Randolph Y., Lord, Mike and Roberts, L. M. (Lynne M.) (2012) Cytosolic entry of Shiga-like toxin A chain from the yeast endoplasmic reticulum requires catalytically active Hrd1p. PLoS ONE, Vol.7 (No.7). e41119. doi:10.1371/journal.pone.0041119

Lico, Chiara, Santi, Luca, Twyman, Richard M., Pezzotti, Mario and Avesani, Linda (2012) The use of plants for the production of therapeutic human peptides. Plant Cell Reports, Vol.31 (No.3). pp. 439-451. doi:10.1007/s00299-011-1215-7

Liebrand, T. W. H., Smit, P., Abd-El-Haliem, A., de Jonge, R., Cordewener, J. H. G., America, A. H. P., Sklenar, J., Jones, Alexandra M., Robatzek, S., Thomma, B. P. H. J., Tameling, W. I. L. and Joosten, M. H. A. J. (2012) Endoplasmic reticulum-quality control chaperones facilitate the biogenesis of Cf receptor-like proteins involved in pathogen resistance of tomato. Plant Physiology, Volume 159 (Number 4). pp. 1819-1833. doi:10.1104/pp.112.196741

Lu, Jin, Stewart, Alan J, Sleep, Darrell, Sadler, P. J., Pinheiro, Teresa J. T. and Blindauer, Claudia A. (2012) A molecular mechanism for modulating plasma Zn speciation by fatty acids. Journal of the American Chemical Society, Vol.134 (No.3). pp. 1454-1457. doi:10.1021/ja210496n

Lu, Jin, Stewart, Alan J., Sadler, P. J., Pinheiro, Teresa J. T. and Blindauer, Claudia A. (2012) Allosteric inhibition of cobalt binding to albumin by fatty acids : implications for the detection of myocardial ischemia. Journal of Medicinal Chemistry, Vol.55 (No.9). pp. 4425-4430. doi:10.1021/jm3003137

Maliene, Vida, Durney-Knight, Natalie, Sertyesilisik, Begum and Malys, Naglis (2012) Challenges and opportunities in developing sustainable communities in the North West of England. Challenges, Volume 3 (Number 2). pp. 133-152. doi:10.3390/challe3020133

Maliene, Vida, Wignall, Luke and Malys, Naglis (2012) Brownfield regeneration: waterfront site developments in liverpool and cologne. Journal of Environmental Engineering and Landscape Management, 20 (1). pp. 5-16. doi:10.3846/16486897.2012.659030

Malys, Naglis (2012) Shine-Dalgarno sequence of bacteriophage T4 : GAGG prevails in early genes. Molecular Biology Reports, Vol.39 (No.1). pp. 33-39. doi:10.1007/s11033-011-0707-4

Martín, Juan F. , Santos-Beneit, Fernando, Rodríguez-García, Antonio , Sola-Landa, Alberto , Smith, Margaret C. M., Ellingsen, Trond E., Nieselt, Kay , Burroughs, Nigel John and Wellington, E. M. H. (2012) Transcriptomic studies of phosphate control of primary and secondary metabolism in Streptomyces coelicolor. Applied Microbiology and Biotechnology, Vol.95 (No.1). pp. 61-75. doi:10.1007/s00253-012-4129-6

Martínez-Andújar, Cristina, Pluskota, Wioletta E., Bassel, George, Asahina, Masashi, Pupel, Piotr, Nguyen, Theresa T., Takeda-Kamiya, Noriko, Toubiana, David, Bai, Bing, Górecki, Ryszard J., Fait, Aaron, Yamaguchi, Shinjiro and Nonogaki, Hiroyuki (2012) Mechanisms of hormonal regulation of endosperm cap-specific gene expression in tomato seeds. The Plant Journal, 71 (4). pp. 575-586. doi:10.1111/j.1365-313X.2012.05010.x

Masse, Karine and Dale, Nicholas (2012) Purines as potential morphogens during embryonic development. Purinergic Signalling, Vol.8 (No.3). pp. 503-521. doi:10.1007/s11302-012-9290-y

Matos, Cristina F. R. O., Branston, Steven D., Albiniak, A. M., Dhanoya, Arjun, Freedman, R. B., Keshavarz-Moore, Eli and Robinson, Colin (2012) High-yield export of a native heterologous protein to the periplasm by the tat translocation pathway in Escherichia coli. Biotechnology and Bioengineering, Vol.109 (No.10). pp. 2533-2542. doi:10.1002/bit.24535

Matsoukas, Ioannis G., Massiah, Andrea J. and Thomas, Brian (2012) Florigenic and Antiflorigenic Signalling in Plants. Plant and Cell Physiology . doi:10.1093/pcp/pcs130

Matz, Mikhail V., Yang, Sung-Yin, Keshavmurthy, Shashank, Obura, David , Sheppard, Charles (Charles R. C.), Visram, Shakil and Chen, Chaolun Allen (2012) Diversity and distribution of symbiodinium associated with seven common coral species in the Chagos Archipelago, Central Indian Ocean. PLoS One, Vol.7 (No.5). Article no. e35836. doi:10.1371/journal.pone.0035836

Mazard, Sophie, Ostrowski, Martin, Partensky, Frédéric and Scanlan, David J. (2012) Multi-locus sequence analysis, taxonomic resolution and biogeography of marine Synechococcus. Environmental Microbiology, Volume 14 (Number 2). pp. 372-386. doi:10.1111/j.1462-2920.2011.02514.x

Mazard, Sophie, Wilson, William H. and Scanlan, David J. (2012) Dissecting the physiological response to phosphorus stress in marine synechococcus isolates (cyanophyceae). Journal of Phycology , Vol.48 (No.1). pp. 94-105. doi:10.1111/j.1529-8817.2011.01089.x

McDowell, A. (Andrew), Barnard, E. (Emma), Nagy, I. (István), Gao, Anna, Tomida, Shuta, Li, Huiying, Eady, Anne, Cove, Jonathan, Nord, Carl Erik and Patrick, Sheila (2012) An expanded multilocus sequence typing scheme for propionibacterium acnes : investigation of 'pathogenic', 'commensal' and antibiotic resistant strains. PLoS ONE, Vol.7 (Vol.7). e41480. doi:10.1371/journal.pone.0041480

McLennan, R., Dyson, Louise, Prather, K. W., Morrison, J. A., Baker, R. E., Maini, P. K. and Kulesa, P. M. (2012) Multiscale mechanisms of cell migration during development : theory and experiment. Development , 139 (16). pp. 2935-2944. doi:10.1242/dev.081471

Mitchell, R. M., Medley, Graham, Collins, Michael T. and Schukken, Y. H. (2012) A meta-analysis of the effect of dose and age at exposure on shedding of Mycobacterium avium subspecies paratuberculosis (MAP) in experimentally infected calves and cows. Epidemiology and Infection, Vol.140 (No.2). pp. 231-246. doi:10.1017/S0950268811000689

Mnyone, Ladslaus L., Lyimo, Issa N., Lwetoijera, Dickson W., Mpingwa, Monica W., Nchimbi, Nuru, Hancock, Penelope A., Russell, Tanya L., Kirby, Matthew J., Takken, W. and Koenraadt, Constantianus J. M. (2012) Exploiting the behaviour of wild malaria vectors to achieve high infection with fungal biocontrol agents. Malaria Journal, Vol.11 (No.1). p. 87. doi:10.1186/1475-2875-11-87

Moccia, Claudia, Krebes, Juliane, Kulick, Stefan, Didelot, Xavier, Kraft, Christian, Bahlawane, Christelle and Suerbaum, Sebastian (2012) The nucleotide excision repair (NER) system of Helicobacter pylori : role in mutation prevention and chromosomal import patterns after natural transformation. BMC Microbiology, 12 (1). 67. doi:10.1186/1471-2180-12-67

Monteferrante, C. G., Baglieri, J., Robinson, Colin and van Dijl, J. M. (2012) TatAc, the third TatA subunit of Bacillus subtilis, can form active twin-arginine tanslocases with the TatCd and TatCy subunits. Applied and Environmental Microbiology, Volume 78 (Number 14). pp. 4999-5001. doi:10.1128/AEM.01108-12

(2012) Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche. Proceedings of the National Academy of Sciences of the United States of America, Vol.109 (No.43). pp. 17501-17506. doi:10.1073/pnas.1206847109

Mulema, Joseph M. K. and Denby, Katherine J. (2012) Spatial and temporal transcriptomic analysis of the Arabidopsis thaliana–Botrytis cinerea interaction. Molecular Biology Reports, Volume 39 (Number 4). pp. 4039-4049. doi:10.1007/s11033-011-1185-4

Mulema, Joseph M. K., Vicente, Joana G., Pink, David, Jackson, Alison C., Chacha, Duncan O., Wasilwa, L. A. (Lusike A.), Kinyua, Zakary M., Karanja, Daniel K., Holub, E. B. and Hand, Paul (2012) Characterization of isolates that cause black rot of crucifers in East Africa. European Journal of Plant Pathology, Vol.133 (No.2). pp. 427-438. doi:10.1007/s10658-011-9916-x

Murray, Justine V., Lehnhoff, Erik A., Neve, Paul, Poggio, Santiago L. and Webber, Bruce L. (2012) 'Raising the bar' : improving the standard and utility of weed and invasive plant research. New Phytologist, Vol.196 (No.3). pp. 678-680. doi:10.1111/j.1469-8137.2012.04343.x

Mushinski, Ryan , Squires, Brian M., Sincerbox, Katherine A. and Hudnall, Todd W. (2012) Amino-acrylamido carbenes : modulating carbene reactivity via decoration with an α,β-unsaturated carbonyl moiety. Organometallics, 31 (13). pp. 4862-4870. doi:10.1021/om300401t

Möller, Karoline, Stahl, Tobias, Boltze, Johannes and Wagner, Daniel-Christoph (2012) Isolation of inflammatory cells from rat brain tissue after stroke. Experimental & Translational Stroke Medicine, 4 (1). p. 20. doi:10.1186/2040-7378-4-20

Namouchi, A., Didelot, Xavier, Schock, U., Gicquel, B. and Rocha, E. P. C. (2012) After the bottleneck : genome-wide diversification of the Mycobacterium tuberculosis complex by mutation, recombination, and natural selection. Genome Research, 22 (4). pp. 721-734. doi:10.1101/gr.129544.111

Nelson, A. C., Pillay, Nischalan, Henderson, Stephen, Presneau, Nadège, Tirabosco, Roberto, Halai, Dina, Berisha, Fitim, Flicek, Paul, Stemple, Derek L., Stern, Claudio D., Wardle, Fiona C. and Flanagan, Adrienne M. (2012) An integrated functional genomics approach identifies the regulatory network directed by brachyury (T) in chordoma. Journal of Pathology, 228 (3). pp. 274-285. doi:10.1002/path.4082

(2012) Structural basis for benzothiazinone-mediated killing of Mycobacterium tuberculosis. Science Translational Medicine, Vol.4 (No.150). Article no. 150ra121. doi:10.1126/scitranslmed.3004395

Newbigin, Edward, Rayson, Samantha, Arciga-Reyes, Luis, Wootton, Lucie, Torres Zabala, Marta de, Truman, William, Graham, Neil, Grant, Murray and Davies, Brendan (2012) A role for nonsense-mediated mRNA decay in plants : pathogen responses are induced in Arabidopsis thaliana NMD mutants. PLoS One, 7 (2). pp. 1-13. e31917. doi:10.1371/journal.pone.0031917

Nezis, I. P. (2012) The selectivity and specificity of autophagy in drosophila. Cells, Volume 1 (Number 3). pp. 248-262. doi:10.3390/cells1030248

Nezis, I. P. (2012) Selective Autophagy in Drosophila. International Journal of Cell Biology, Vol. 2012 . pp. 1-9. doi:10.1155/2012/146767

Nezis, I. P. and Stenmark, H. (Harald) (2012) p62 at the Interface of Autophagy, Oxidative Stress Signaling, and Cancer. Antioxidants & Redox Signaling, Vol. 17 (No. 5). pp. 786-793. doi:10.1089/ars.2011.4394

Nielsen, B. H., Thomsen, P. T., Green, Laura E. and Kaler, Jasmeet (2012) A study of the dynamics of digital dermatitis in 742 lactating dairy cows. Preventive Veterinary Medicine, Vol.104 (No.1-2). pp. 44-52. doi:10.1016/j.prevetmed.2011.10.002

Nielsen, T. D. (Torben Dahl), Green, Laura E., Kudahl, Anne Braad, Østergaard, S. and Nielsen, L. R. (Liza Rosenbaum) (2012) Evaluation of milk yield losses associated with Salmonella antibodies in bulk-tank milk in bovine dairy herds. Journal of Dairy Science, Vol.95 (No.9). pp. 4873-4885. doi:10.3168/jds.2011-4332

Nikitin, Alexander P., Stocks, Nigel G. and Bulsara, Adi (2012) Enhancing the resolution of a sensor via negative correlation : a biologically inspired approach. Physical Review Letters, Vol.109 (No.23). Article no. 238103. doi:10.1103/PhysRevLett.109.238103

Norris, Paul R., Brown, Carly F. and Caldwell, Paul E. (2012) Ore column leaching with thermophiles: II, polymetallic sulfide ore. Hydrometallurgy, Vol. 127-128 . pp. 70-76. doi:10.1016/j.hydromet.2012.07.005

Norris, Paul R., Calvo-Bado, Leo A., Brown, Carly F. and Davis-Belmar, Carol S. (2012) Ore column leaching with thermophiles: I, copper sulfide ore. Hydrometallurgy, Vol. 127-128 . pp. 62-69. doi:10.1016/j.hydromet.2012.07.003

Nuritova, F. and Frenguelli, Bruno G. (2012) Putative depolarisation-induced retrograde signalling accelerates the repeated hypoxic depression of excitatory synaptic transmission in area CA1 of rat hippocampus via group I metabotropic glutamate receptors. Neuroscience, Vol.222 . pp. 159-172. doi:10.1016/j.neuroscience.2012.07.034

Oakley, Brian B., Carbonero, Franck, Dowd, Scot E, Hawkins, Robert J and Purdy, Kevin J. (2012) Contrasting patterns of niche partitioning between two anaerobic terminal oxidizers of organic matter. ISME Journal, Vol.6 (No.5). pp. 905-914. doi:10.1038/ismej.2011.165

Ohuma, E. O., Okiro, E. A., Ochola, R., Sande, C. J., Cane, Patricia, Medley, Graham, Bottomley, C. and Nokes, D. James (2012) The natural history of respiratory syncytial virus in a birth cohort : the influence of age and previous infection on reinfection and disease. American Journal of Epidemiology, Vol.176 (No.9). pp. 794-802. doi:10.1093/aje/kws257

Okiro, Emelda A., Ngama, Mwanajuma, Bett, Ann and Nokes, D. James (2012) The incidence and clinical burden of respiratory syncytial virus disease identified through hospital outpatient presentations in Kenyan children. PLoS One, Vol.7 (No.12). e52520. doi:10.1371/journal.pone.0052520

Onyango, Clayton O., Njeru, Regina, Kazungu, Sidi, Achilla, Rachel, Bulimo, Wallace, Welch, Stephen R., Cane, Patricia, Gunson, Rory N., Hammitt, Laura L., Scott, J. Anthony G., Berkley, James A. and Nokes, D. James (2012) Influenza surveillance among children with pneumonia admitted to a district hospital in coastal Kenya, 2007-2010. Journal of Infectious Diseases, Volume 206 (Supplement 1). S61-S67. doi:10.1093/infdis/jis536

Onyango, Clayton O., Welch, Stephen R., Munywoki, Patrick K., Agoti, Charles N., Bett, Ann, Ngama, Mwanajuma, Myers, Richard, Cane, Patricia and Nokes, D. James (2012) Molecular epidemiology of human rhinovirus infections in Kilifi, coastal Kenya. Journal of Medical Virology, Volume 84 (Number 5). pp. 823-831. doi:10.1002/jmv.23251

Pacheco, Luis G. C., Castro, Thiago L. P., Carvalho, Rodrigo D. O., Moraes, Pablo M., Dorella, Fernanda A., Carvalho, Natália B., Slade, Susan E., Scrivens, James H., Feelisch, Martin, Meyer, Roberto, Miyoshi, Anderson, Oliveira, Sérgio C., Dowson, Christopher G. and Azevedo, Vasco (2012) A role for sigma factor σE in corynebacterium pseudotuberculosis resistance to nitric oxide/peroxide stress. Frontiers in Microbiology, Volume 3 . Article number 126. doi:10.3389/fmicb.2012.00126

Palmer, Sarah A., Clapham, A. J., Rose, P., Freitas, F. O., Owen, B. D., Beresford-Jones, D., Moore, Jonathan D., Kitchen, James and Allaby, Robin G. (2012) Archaeogenomic evidence of punctuated genome evolution in Gossypium. Molecular Biology and Evolution, Volume 29 (Number 8). pp. 2031-2038. doi:10.1093/molbev/mss070

Palmer, Sarah A., Smith, Oliver and Allaby, Robin G. (2012) The blossoming of plant archaeogenetics. Annals of Anatomy, Vol.194 (No.1). pp. 146-156. doi:10.1016/j.aanat.2011.03.012

Papin, Jason A., Carrera, Javier, Fernández del Carmen, Asun, Fernández-Muñoz, Rafael, Rambla, Jose Luis, Pons, Clara, Jaramillo, Alfonso, Elena, Santiago F. and Granell, Antonio (2012) Fine-tuning tomato agronomic properties by computational genome redesign. PLoS Computational Biology, 8 (6). e1002528. doi:10.1371/journal.pcbi.1002528

Patel, Jeetesh V., Chackathayil, Julia, Gammon, Brian, Tracey, Inessa, Lovick, Adam, Gill, Paramjit, Banerjee, Amitava, Scarff, Charlotte A., Scrivens, James H., Lip, Gregory Y. H. and Hughes, E. (2012) Is the higher risk of cardiovascular disease amongst South Asian populations linked to abnormalities of haemoglobin? A preliminary case control study. Atherosclerosis . doi:10.1016/j.atherosclerosis.2012.09.017

Patel, Nisha A., Crombie, Andrew, Slade, Susan E., Thalassinos, Konstantinos, Hughes, Chris, Connolly, Joanne B., Langridge, James, Murrell, J. C. (J. Colin) and Scrivens, James H. (2012) Comparison of one- and two-dimensional liquid chromatography approaches in the label-free quantitative analysis of methylocella silvestris. Journal of Proteome Research, Vol.11 (No.9). pp. 4755-4763. doi:10.1021/pr300253s

Patterson, Joseph P., Sánchez, Ana M., Petzetakis, Nikos, Smart, Thomas P., Epps, Thomas H., Portman, Ian, Wilson, Neil R. and O'Reilly, Rachel K. (2012) A simple approach to characterizing block copolymer assemblies : graphene oxide supports for high contrast multi-technique imaging. Soft Matter, 8 (12). pp. 3322-3328. doi:10.1039/c2sm07040e

Pauwels, Kris, Williams, Thomas L., Morris, Kyle L., Jonckheere, Wim, Vandersteen, Annelies, Kelly, Geoff, Schymkowitz, Joost, Rousseau, Frederic, Pastore, Annalisa, Serpell, Louise C. and Broersen, Kerensa (2012) Structural basis for increased toxicity of pathological Aβ42 : Aβ40Ratios in Alzheimer disease. Journal of Biological Chemistry, 287 (8). pp. 5650-5660. doi:10.1074/jbc.M111.264473

Pearce, David A., Newsham, Kevin K., Thorne, Michael A. S., Calvo-Bado, Leo A., Krsek, Martin, Laskaris, Paris, Hodson, Andrew J. and Wellington, E. M. H. (2012) Metagenomic analysis of a southern maritime Antarctic soil. Frontiers in Microbiology, Volume 3 . Article number 403. doi:10.3389/fmicb.2012.00403

Pelacho, Beatriz, Pösel, Claudia, Möller, Karoline, Fröhlich, Wenke, Schulz, Isabell, Boltze, Johannes and Wagner, Daniel-Christoph (2012) Density gradient centrifugation compromises bone marrow mononuclear cell yield. PLoS One, 7 (12). e50293. doi:10.1371/journal.pone.0050293

Penfold, Christopher A., Buchanan-Wollaston, Vicky, Denby, Katherine J. and Wild, David L. (2012) Nonparametric Bayesian inference for perturbed and orthologous gene regulatory networks. Bioinformatics, Vol.28 (No.12). i233-i241. doi:10.1093/bioinformatics/bts222

Penman, Bridget S., Gupta, Sunetra and Buckee, Caroline O. (2012) The emergence and maintenance of sickle cell hotspots in the Mediterranean. Infection, Genetics and Evolution , 12 (7). pp. 1543-1550. doi:10.1016/j.meegid.2012.06.001

Perera, Venura, De Torres Zabala, Marta, Florance, Hannah, Smirnoff, Nicholas, Grant, Murray and Yang, Zheng Rong (2012) Aligning extracted LC-MS peak lists via density maximization. Metabolomics, 8 (S1). pp. 175-185. doi:10.1007/s11306-011-0389-x

Perez-Brandán, Carolina, Arzeno, José L., Huidobro, Jorgelina, Grümberg, Betiana, Conforto, Cinthia, Hilton, Sally, Bending, G. D., Meriles, José M. and Vargas-Gil, Silvina (2012) Long-term effect of tillage systems on soil microbiological, chemical and physical parameters and the incidence of charcoal rot by Macrophomina phaseolina (Tassi) Goid in soybean. Crop Protection, Volume 40 . pp. 73-82. doi:10.1016/j.cropro.2012.04.018

Pinski, S. D., Schirmacher, W., Whall, Terry E. and Römer, Rudolf A. (2012) Localization–delocalization transition for disordered cubic harmonic lattices. Journal of Physics: Condensed Matter, Vol.24 (No.40). Article no. 405401. doi:10.1088/0953-8984/24/40/405401

Pires-da Silva, André Francisco and Parihar, Manish (2012) Evo-devo of the germline and somatic gonad in nematodes. Sexual Development, Vol.7 (No.1-3). pp. 163-170. doi:10.1159/000337960

Ploeg, R. van der, Monteferrante, Carmine G., Piersma, Sjouke, Barnett, James P., Kouwen, Thijs R. H. M., Robinson, Colin and van Dijl, J. M. (2012) High-salinity growth conditions promote tat-independent secretion of tat substrates in Bacillus subtilis. Applied and Environmental Microbiology, Vol.78 (No.21). pp. 7733-7744. doi:10.1128/AEM.02093-12

Price, A. R. G., Donlan, M. C. , Sheppard, Charles (Charles R. C.) and Munawar, M. (2012) Environmental rejuvenation of the Gulf by compensation and restoration. Aquatic Ecosystem Health & Management, Vol.15 (Supp.1). pp. 7-13. doi:10.1080/14634988.2012.659142

Qiang, X., Zechmann, B., Reitz, M. U., Kogel, Karl-Heinz and Schäfer, Patrick (2012) The mutualistic fungus Piriformospora indica colonizes Arabidopsis roots by inducing an endoplasmic reticulum stress-triggered caspase-dependent cell death. The Plant Cell, Volume 24 (Number 2). pp. 794-809. doi:10.1105/tpc.111.093260

Qin, Cheng, Shi, Nongnong, Gu, Mei, Zhang, Hang, Li, Bin, Shen, Jiajia, Mohammed, Atef, Ryabov, Eugene V., Li, Chunyang, Wang, Huizhong, Liu, Yule, Osman, Toba, Vatish, Manu and Hong, Yiguo (2012) Involvement of RDR6 in short-range intercellular RNA silencing in Nicotiana benthamiana. Scientific Reports, Vol.2 (No.467). doi:10.1038/srep00467

Rayson, Samantha, Ashworth, Mary, Torres Zabala, Marta de, Grant, Murray and Davies, Brendan (2012) The salicylic acid dependent and independent effects of NMD in plants. Plant Signaling & Behavior, 7 (11). pp. 1434-1437. doi:10.4161/psb.21960

Raza, Shan-e-Ahmed, Humayun, Ahmad, Abouna, Sylvie, Nattkemper, Tim W., Epstein, D. B. A., Khan, Michael and Rajpoot, Nasir M. (Nasir Mahmood) (2012) RAMTaB : robust alignment of multi-tag bioimages. PLoS One, Vol.7 (No.2). e30894. doi:10.1371/journal.pone.0030894

Reim, Andreas, Lüke, Claudia, Krause, Sascha, Pratscher, Jennifer and Frenzel, Peter (2012) One millimetre makes the difference : high-resolution analysis of methane-oxidizing bacteria and their specific activity at the oxic–anoxic interface in a flooded paddy soil. ISME Journal, Vol.6 (No.11). pp. 2128-2139. doi:10.1038/ismej.2012.57

Reitz, Marco U., Bissue, J. K., Zocher, K., Attard, A., Hückelhoven, Ralph, Becker, K., Imani, Jafargholi, Eichmann, Ruth and Schäfer, Patrick (2012) The subcellular localization of tubby-like proteins and participation in stress signaling and root colonization by the mutualist piriformospora indica. Plant Physiology, Volume 160 (Number 1). pp. 349-364. doi:10.1104/pp.112.201319

Riegl, Bernhard M., Sheppard, Charles (Charles R. C.) and Purkis, Samuel J. (2012) Human impact on atolls leads to coral loss and community homogenisation : a modeling study. PLoS ONE, Vol.7 (No.6). e36921. doi:10.1371/journal.pone.0036921

Rodrigo, Guillermo, Carrera, Javier, Landrain, Thomas E. and Jaramillo, Alfonso (2012) Perspectives on the automatic design of regulatory systems for synthetic biology. FEBS Letters, 586 (15). pp. 2037-2042. doi:10.1016/j.febslet.2012.02.031

Rodrigo, Guillermo, Landrain, T. E. and Jaramillo, Alfonso (2012) De novo automated design of small RNA circuits for engineering synthetic riboregulation in living cells. Proceedings of the National Academy of Sciences of the United States of America, 109 (38). pp. 15271-15276. doi:10.1073/pnas.1203831109

(2012) Structure of the TatC core of the twin-arginine protein transport system. Nature, 492 (7428). pp. 210-214. doi:10.1038/nature11683

Roman, A., Andreu, V., Hernandez, M. L., Lagunas, B., Picorel, R., Martinez-Rivas, J. M. and Alfonso, M. (2012) Contribution of the different omega-3 fatty acid desaturase genes to the cold response in soybean. Journal of Experimental Botany, 63 (13). pp. 4973-4982. doi:10.1093/jxb/ers174

Rose, Laura E., Atwell, Susanna, Grant, Murray and Holub, E. B. (2012) Parallel loss-of-function at the RPM1 bacterial resistance locus in Arabidopsis thaliana. Frontiers in Plant Science, Volume 3 . Article number 287. doi:10.3389/fpls.2012.00287

Roth, S. and Panfilio, Kristen A. (2012) Making waves for segments. Science, 336 (6079). pp. 306-307. doi:10.1126/science.1222242

Sanchez-Vallet, A., Lopez, G., Ramos, B., Delgado-Cerezo, M., Riviere, M. -P., Llorente, F., Fernandez, P. V., Miedes, E., Estevez, J. M., Grant, Murray and Molina, A. (2012) Disruption of abscisic acid signaling constitutively activates arabidopsis resistance to the necrotrophic fungus plectosphaerella cucumerina. Plant Physiology, 160 (4). pp. 2109-2124. doi:10.1104/pp.112.200154

Saunders, D. G. O., Breen, Susan, Win, J., Schornack, S., Hein, I., Bozkurt, T. O., Champouret, N., Vleeshouwers, V. G. A. A., Birch, P. R. J., Gilroy, E. M. and Kamoun, S. (2012) Host protein BSL1 associates with phytophthora infestans RXLR effector AVR2 and the solanum demissum immune receptor R2 to mediate disease resistance. The Plant Cell, 24 (8). pp. 3420-3434. doi:10.1105/tpc.112.099861

Scanlan, Pauline D., Buckling, Angus, Kong, Weidong, Wild, Yvette, Lynch, Susan V. and Harrison, Freya (2012) Gut dysbiosis in cystic fibrosis. Journal of Cystic Fibrosis, 11 (5). pp. 454-455. doi:10.1016/j.jcf.2012.03.007

Scarff, Charlotte A., Snelling, J., Knust, Matthias M., Wilkins, Charles L. and Scrivens, James H. (2012) New structural insights into mechanically interlocked polymers revealed by ion mobility mass spectrometry. Journal of the American Chemical Society, Vol.134 (No.22). pp. 9193-9198. doi:10.1021/ja2118656

Schmitt, L. Ian, Sims, Robert E., Dale, Nicholas and Haydon, Philip G (2012) Wakefulness affects synaptic and network activity by increasing extracellular astrocyte-derived adenosine. The Journal of neuroscience : the official journal of the Society for Neuroscience, Vol.32 (No.13). pp. 4417-4425. doi:10.1523/JNEUROSCI.5689-11.2012

Shelton, J., Usherwood, N. M., Wapenaar, W., Brennan, M. L. and Green, Laura E. (2012) Measurement and error of hoof horn growth rate in sheep. Journal of Agricultural Science, Vol.150 (No.3). pp. 373-378. doi:10.1017/S0021859611000748

Sheppard, Charles (Charles R. C.) (2012) Chagos corals : the debate continues. Ocean Challenge, Volume 19 (Number 1).

Sheppard, Charles (Charles R. C.) (2012) Management through the looking glass. Marine Pollution Bulletin, Volume 64 (Number 12). pp. 2621-2622. doi:10.1016/j.marpolbul.2012.11.011

Sheppard, Charles (Charles R. C.) (2012) Sharks on the lawn : the reality of rising sea-level on Indian Ocean Islands. Ocean Challenge, Volume 19 . p. 17.

(2012) Reefs and islands of the Chagos Archipelago, Indian Ocean : why it is the world's largest no-take marine protected area. Aquatic Conservation: Marine and Freshwater Ecosystems, Volume 22 (Number 2). pp. 232-2361. doi:10.1002/aqc.1248

(2012) Progressive genome-wide introgression in agricultural Campylobacter coli. Molecular Ecology, 22 (4). pp. 1051-1064. doi:10.1111/mec.12162

Smith, Claire M., Djakow, Jana, Free, Robert C., Djakow, Petr, Lonnen, Rana, Williams, Gwyneth, Pohunek, Petr, Hirst, Robert A., Easton, A. J. (Andrew J.), Andrew, Peter W. and O’Callaghan, Christopher (2012) ciliaFA : a research tool for automated, high-throughput measurement of ciliary beat frequency using freely available software. Cilia, Volume 1 (Number 1). Article no. 14. doi:10.1186/2046-2530-1-14

Smith, Corinne J. (2012) Size doesn't matter! The importance of size variability in coated vesicles. Developmental Cell, Volume 23 (Number 1). pp. 9-10. doi:10.1016/j.devcel.2012.06.017

Smith, Edward M., Hoffman, Joseph I., Green, Laura E. and Amos, William (2012) Preliminary association of microsatellite heterozygosity with footrot in domestic sheep. Livestock Science, Vol.143 (No.2). pp. 293-299. doi:10.1016/j.livsci.2011.10.009

Snelling, Jonathon R., Scarff, Charlotte A. and Scrivens, James H. (2012) Characterization of complex polysorbate formulations by means of shape-selective mass spectrometry. Analytical Chemistry, Volume 84 (Number 15). pp. 6521-6529. doi:10.1021/ac300779p

Solcan, Nicolae, Kwok, Jane, Fowler, Philip W, Cameron, Alexander, Drew, David, Iwata, So and Newstead, Simon (2012) Alternating access mechanism in the POT family of oligopeptide transporters. The EMBO Journal, Vol. 31 (No. 16). pp. 3411-3421. doi:10.1038/emboj.2012.157

Sopeña, Fatima, Semple, Kirk, Sohi, Saran and Bending, G. D. (2012) Assessing the chemical and biological accessibility of the herbicide isoproturon in soil amended with biochar. Chemosphere, Vol.88 (No.1). pp. 77-83. doi:10.1016/j.chemosphere.2012.02.066

Spadafora, Natasha, Parfitt, David, Marchbank, Angela, Li, Sherong, Bruno, Leonardo, Vaughan, Rhys, Nieuwland, Jeroen, Buchanan-Wollaston, Vicky, Herbert, Robert, Bitonti, Maria Beatrice, Doonan, John, Albani, Diego, Prinsen, Els, Francis, D. (Dennis) and Rogers, Hilary (2012) Perturbation of cytokinin and ethylene-signalling pathways explain the strong rooting phenotype exhibited by Arabidopsis expressing the Schizosaccharomyces pombe mitotic inducer, cdc25. BMC Plant Biology, Vol.12 (No.1). p. 45. doi:10.1186/1471-2229-12-45

Spickett, A., de Villiers, J. F., Boomker, J., Githiori, J. B., Medley, Graham, Stenson, M. O., Waller, P. J., Calitz, F. J. and Vatta, A. F. (2012) Tactical treatment with copper oxide wire particles and symptomatic levamisole treatment using the FAMACHA© system in indigenous goats in South Africa. Veterinary Parasitology, Vol.184 (No.1). pp. 48-58. doi:10.1016/j.vetpar.2011.08.003

Spooner, Robert A. and Lord, Mike (2012) How ricin and shiga toxin reach the cytosol of target cells : retrotranslocation from the endoplasmic reticulum. Current Topics in Microbiology and Immunology, Vol.357 . pp. 19-40. doi:1007/82_2011_154

Steinke, Dirk, de Vere, Natasha, Rich, Tim C. G., Ford, Col R., Trinder, Sarah A., Long, Charlotte, Moore, Chris W., Satterthwaite, Danielle, Davies, Helena, Allainguillaume, Joel, Ronca, Sandra, Tatarinova, Tatiana, Garbett, Hannah, Walker, Kevin and Wilkinson, Mike J. (2012) DNA barcoding the native flowering plants and conifers of Wales. PLoS One, 7 (6). e37945. doi:10.1371/journal.pone.0037945

Suarez-Suarez, L. Y., Brunet-Galmes, I., Pina-Villalonga, J. M., Christie-Oleza, Joseph Alexander, Pena, A., Bennasar, A., Armengaud, J., Nogales, B. and Bosch, R. (2012) Draft genome sequence of Citreicella aestuarii strain 357, a member of the roseobacter clade isolated without xenobiotic pressure from a petroleum-polluted beach. Journal of Bacteriology, Volume 194 (Number19). pp. 5464-5465. doi:10.1128/JB.01261-12

(2012) Identification of 100 fundamental ecological questions. Journal of Ecology, Volume 101 (Number 1). pp. 58-67. doi:10.1111/1365-2745.12025

Sutton, A. J., Karagenc, T., Bakirci, S., Sarali, H., Pekel, G. and Medley, Graham (2012) Modelling the transmission dynamics of Theileria annulata : model structure and validation for the Turkish context. Parasitology, Volume 139 (Number 4). pp. 441-453. doi:10.1017/S003118201100223X

Szmaragd, Camille, Green, Laura E., Medley, Graham and Browne, William J. (2012) Impact of imperfect test sensitivity on determining risk factors : the case of bovine tuberculosis. PLoS ONE, Vol.7 (No.8). e43116. doi:10.1371/journal.pone.0043116

Taillebourg, Emmanuel, Gregoire, Isabel, Viargues, Perrine, Jacomin, Anne-Claire, Thevenon, Dominique, Faure, Mathias and Fauvarque, Marie-Odile (2012) The deubiquitinating enzyme USP36 controls selective autophagy activation by ubiquitinated proteins. Autophagy, 8 (5). pp. 767-779. doi:10.4161/auto.19381

Takan, J. P., Chipili, J., Muthumeenakshi, S., Talbot, Nick (Nicholas J.), Manyasa, E. O., Bandyopadhyay, R., Sere, Y., Nutsugah, S. K., Talhinhas, Pedro, Hossain, M., Brown, A. E. and Sreenivasaprasad, S. (2012) Magnaporthe oryzae populations adapted to finger millet and rice exhibit distinctive patterns of genetic diversity, sexuality and host interaction. Molecular Biotechnology, Vol.50 (No.2). pp. 145-158. doi:10.1007/s12033-011-9429-z

Tarabra, Elena, Actis, G. C., Fadda, M., De Paolis, P., Comandone, A., Coda, R. and Rosina, F. (2012) The obesity gene and colorectal cancer risk: a population study in northern Italy. European Journal of Internal Medicine, Vol.23 (No.1). pp. 65-69. doi:10.1016/j.ejim.2011.07.011

Tarabra, Elena, Pelengaris, Stella and Khan, Michael (2012) A simple matter of life and death : the trials of postnatal beta-cell mass regulation. International Journal of Endocrinology, Vol.2012 . Article no. 516718. doi:10.1155/2012/516718

Terpolilli, Nicole A., Kim, Seong-Woong, Thal, Serge C., Kataoka, Hiroharu, Zeisig, Vilia, Nitzsche, Bjoern, Klaesner, Benjamin, Zhu, Changlian, Schwarzmaier, Susanne, Meissner, Lilja, Mamrak, Uta, Engel, Doortje C., Drzezga, Alexander, Patel, Rakesh P., Blomgren, Klas, Barthel, Henryk, Boltze, Johannes, Kuebler, Wolfgang M. and Plesnila, Nikolaus (2012) Inhalation of nitric oxide prevents ischemic brain damage in experimental stroke by selective dilatation of collateral arterioles. Circulation Research, 110 (5). pp. 727-738. doi:10.1161/CIRCRESAHA.111.253419

Thalassinos, Konstantinos, Vissers, Johannes P. C., Tenzer, Stefan, Levin, Yishai, Thompson, J. Will, Daniel, David, Mann, Darrin, DeLong, Mark R., Moseley, M. Arthur, America, Antoine H., Ottens, Andrew K., Cavey, Greg S., Efstathiou, Georgios, Scrivens, James H., Langridge, James I. and Geromanos, Scott J. (2012) Design and application of a data-independent precursor and product ion repository. Journal of The American Society for Mass Spectrometry, Vol.23 (No.10). pp. 1808-1820. doi:10.1007/s13361-012-0416-9

Tindall, Marcus J., Dyson, Louise, Smallbone, Kieran and Maini, Philip K. (2012) Modelling acidosis and the cell cycle in multicellular tumour spheroids. Journal of Theoretical Biology, 298 . pp. 107-115. doi:10.1016/j.jtbi.2011.11.009

Traugott, M., Bell, J. R., Raso, L., Sint, D. and Symondson, W. O. C. (William O. C.) (2012) Generalist predators disrupt parasitoid aphid control by direct and coincidental intraguild predation. Bulletin of Entomological Research, Volume 102 (Number 2). pp. 239-247. doi:10.1017/S0007485311000551

Trimmer, Mark and Purdy, Kevin J. (2012) Evidence for the direct oxidation of organic nitrogen to N2 gas in the Arabian Sea. ISME Journal, Vol.6 (No.9). pp. 1798-1800. doi:10.1038/ismej.2012.18

Tuplin, Andrew, Struthers, Madeleine, Simmonds, P. and Evans, David J. (2012) A twist in the tail : SHAPE mapping of long-range interactions and structural rearrangements of RNA elements involved in HCV replication. Nucleic Acids Research, Vol.40 (No.14). pp. 6908-6921. doi:10.1093/nar/gks370

Turner, Daniel J., Portman, Ian, Dafforn, Tim, Rodger, Alison, Roper, David I., Smith, Corinne J. and Turner, Matthew S. (2012) The Mechanics of FtsZ fibers. Biophysical Journal, Vol.102 (No.4). pp. 731-738. doi:10.1016/j.bpj.2012.01.015

Usha, Veeraraghavan, Lloyd, Adrian, Lovering, Andrew L. and Besra, Gurdyal S. (2012) Structure and function of Mycobacterium tuberculosis meso-diaminopimelic acid (DAP) biosynthetic enzymes. FEMS Microbiology Letters, Vol.330 (No.1). pp. 10-16. doi:10.1111/j.1574-6968.2012.02527.x

Van der Veken, Pieter, Fülöp, Vilmos, Rea, Dean, Gerard, Melanie, Van Elzen, Roos, Joossens, Jurgen, Cheng, Jonathan D., Baekelandt, Veerle, De Meester, Ingrid, Lambeir, Anne-Marie and Augustyns, Koen (2012) P2-SubstitutedN-Acylprolylpyrrolidine Inhibitors of Prolyl Oligopeptidase: Biochemical Evaluation, Binding Mode Determination, and Assessment in a Cellular Model of Synucleinopathy. Journal of Medicinal Chemistry, Vol. 55 (No.22). pp. 9856-9867. doi:10.1021/jm301060g

Van der Veken, Pieter, Fülöp, Vilmos, Rea, Dean, Gerard, Melanie, Van Elzen, Roos, Joossens, Jurgen, Cheng, Jonathan D., Baekelandt, Veerle, De Meester, Ingrid, Lambeir, Anne-Marie and Augustyns, Koen (2012) P2-substitutedN-acylprolylpyrrolidine inhibitors of prolyl oligopeptidase : biochemical evaluation, binding mode determination, and assessment in a cellular model of synucleinopathy. Journal of Medicinal Chemistry, Vol.55 (No.22). pp. 9856-9867. doi:10.1021/jm301060g

Vatta, A. F., Waller, P. J., Githiori, J. B. and Medley, Graham (2012) Persistence of the efficacy of copper oxide wire particles against Haemonchus contortus in grazing South African goats. Veterinary Parasitology, Vol.190 (No.1-2). pp. 159-166. doi:10.1016/j.vetpar.2012.06.018

Vernon, Matthew C. and Keeling, Matthew James (2012) Impact of regulatory perturbations to disease spread through cattle movements in Great Britain. Preventive Veterinary Medicine, Vol.105 (No.1-2). pp. 110-117. doi:10.1016/j.prevetmed.2011.12.016

Vicente, Joana G., Gunn, Nick, Bailey, Liz, Pink, David and Holub, E. B. (2012) Genetics of resistance to downy mildew in Brassica oleracea and breeding towards durable disease control for UK vegetable production. Plant Pathology, Vol.61 (No.3). pp. 600-609. doi:10.1111/j.1365-3059.2011.02539.x

Viguetti, S. Z., Pacheco, L. G. C., Santos, L. S., Soares, S. C., Bolt, F., Baldwin, Adam, Dowson, Christopher G., Rosso, M. L., Guiso, N., Miyoshi, A., Hirata, R., Mattos-Guaraldi, A. L. and Azevedo, V. (2012) Multilocus sequence types of invasive Corynebacterium diphtheriae isolated in the Rio de Janeiro urban area, Brazil. Epidemiology and Infection, Volume 140 (Number 4). pp. 617-620. doi:10.1017/S0950268811000963

Vogler, Catherine, Benzie, John A. H., Barber, Paul H., Erdmann, Mark V., Ambariyanto, , Sheppard, Charles (Charles R. C.), Tenggardjaja, Kimberly, Gérard, Karin and Wörheide, Gert (2012) Phylogeography of the crown-of-thorns starfish in the Indian Ocean. PLoS One, Vol.7 (No.8). e43499. doi:10.1371/journal.pone.0043499

Vogwill, T., Lagator, Mato, Colegrave, N. and Neve, Paul (2012) The experimental evolution of herbicide resistance in Chlamydomonas reinhardtii results in a positive correlation between fitness in the presence and absence of herbicides. Journal of Evolutionary Biology, Vol.25 (No.10). pp. 1955-1964. doi:10.1111/j.1420-9101.2012.02558.x

Wagner, Daniel-Christoph, Bojko, Mitja, Peters, Myriam, Lorenz, Marlene, Voigt, Cornelia, Kaminski, Alexander, Hasenclever, Dirk, Scholz, Markus, Kranz, Alexander, Weise, Gesa and Boltze, Johannes (2012) Impact of age on the efficacy of bone marrow mononuclear cell transplantation in experimental stroke. Experimental & Translational Stroke Medicine, 4 (1). 17. doi:10.1186/2040-7378-4-17

Wagner, Daniel-Christoph, Deten, Alexander, Härtig, Wolfgang, Boltze, Johannes and Kranz, Alexander (2012) Changes in T2 relaxation time after stroke reflect clearing processes. NeuroImage, 61 (4). pp. 780-785. doi:10.1016/j.neuroimage.2012.04.023

Wallace, D. F., Emmett, S. R., Kang, K. K., Chahal, G. S., Hiskens, R., Balasubramanian, S., McGuinness, Katie R., Parsons, Helen, Achten, J. and Costa, Matthew L. (2012) The safety of peri-articular local anaesthetic injection for patients undergoing total knee replacement with autologous blood transfusion : a randomised trial. The Bone & Joint Journal, 94-B (12). pp. 1632-1636. doi:10.1302/0301-620X.94B12.29357

Walley, Peter Glen, Carder, John, Skipper, Emma, Mathas, Evy, Lynn, James R. , Pink, David and Buchanan-Wollaston, Vicky (2012) A new broccoli × broccoli immortal mapping population and framework genetic map: tools for breeders and complex trait analysis. Theoretical and Applied Genetics, Volume 124 (Number 3). pp. 467-484. doi:10.1007/s00122-011-1721-6

Walley, Peter Glen, Teakle, Graham R., Moore, Jonathan D., Allender, Charlotte J., Pink, David A. C., Buchanan-Wollaston, Vicky and Barker, Guy C. (2012) Developing genetic resources for pre-breeding in Brassica oleracea L. : an overview of the UK perspective. Journal of Plant Biotechnology, Volume 39 (Number 1). pp. 62-68. doi:10.5010/JPB.2012.39.1.062

Wang, Yi-Fang, Khan, Michael and Berg, Hugo van den (2012) Interaction of fast and slow dynamics in endocrine control systems with an application to β-cell dynamics. Mathematical Biosciences, Vol.235 (No.1). pp. 8-18. doi:10.1016/j.mbs.2011.10.003

Wang, Yun, Chen, Yin, Zhou, Qian, Huang, Shi, Ning, Kang, Xu, Jian, Kalin, Robert M., Rolfe, Stephen A. and Huang, Wei E. (2012) A culture-independent approach to unravel uncultured bacteria and functional genes in a complex microbial community. PLoS One, Vol.7 (No.10). e47530. doi:10.1371/journal.pone.0047530

Wasukira, Arthur, Tayebwa, Johnbosco, Thwaites, Richard, Paszkiewicz, Konrad, Aritua, Valente, Kubiriba, Jerome, Smith, Julian, Grant, Murray and Studholme, David J. (2012) Genome-wide sequencing reveals two major sub-lineages in the genetically monomorphic pathogen xanthomonas campestris pathovar musacearum. Genes, 3 (4). pp. 361-377. doi:10.3390/genes3030361

Webb, Clare, Ngama, Mwanajuma, Ngatia, Anthony, Shebbe, Mohammed, Morpeth, Susan, Mwarumba, Salim, Bett, Ann, Nokes, D. James, Seale, Anna C., Kazungu, Sidi, Munywoki, Patrick, Hammitt, Laura L., Scott, J Anthony G. and Berkley, James A. (2012) Treatment failure among Kenyan children with severe pneumonia--a cohort study. The Pediatric infectious disease journal, Volume 31 (Number 9). e152-e157. doi:10.1097/INF.0b013e3182638012

Wemhöner, Konstantin, Silbernagel, Nicole, Marzian, Stefanie, Netter, Michael F., Rinné, Susanne, Stansfeld, Phillip J. and Decher, Niels (2012) A leucine zipper motif essential for gating of hyperpolarization-activated channels. Journal of Biological Chemistry, 287 (48). pp. 40150-40160. doi:10.1074/jbc.M112.378513

Wentzel, Alexander, Bruheim, Per, Øverby, Anders, Jakobsen, Øyvind M, Sletta, Håvard, Omara, Walid A. M., Hodgson, D. A. and Ellingsen, Trond E. (2012) Optimized submerged batch fermentation strategy for systems scale studies of metabolic switching in Streptomyces coelicolor A3(2). BMC Systems Biology, Volume 6 . Article number 59. doi:10.1186/1752-0509-6-59

Wilcke, Arndt, Ligges, Carolin, Burkhardt, Jana, Alexander, Michael, Wolf, Christiane, Quente, Elfi, Ahnert, Peter, Hoffmann, Per, Becker, Albert, Müller-Myhsok, Bertram, Cichon, Sven, Boltze, Johannes and Kirsten, Holger (2012) Imaging genetics of FOXP2 in dyslexia. European Journal of Human Genetics, 20 (2). pp. 224-229. doi:10.1038/ejhg.2011.160

(2012) Arabidopsis defense against Botrytis cinerea : chronology and regulation deciphered by high-resolution temporal transcriptomic analysis. The Plant Cell, Vol.24 (No.9). pp. 3530-3557. doi:10.1105/tpc.112.102046

Xie, Qing, Chen, Xiangmei, Lu, Fengmin, Zhang, Ting, Hao, Meili, Wang, Yongfeng, Zhao, Jingmin, McCrae, Malcolm A. and Zhuang, Hui (2012) Aberrant expression of microRNA 155 may accelerate cell proliferation by targeting sex-determining region Y box 6 in hepatocellular carcinoma. Cancer, Volume 118 (Number 9). pp. 2431-2442. doi:10.1002/cncr.26566

Xue, Mingzhan, Rabbani, Naila, Momiji, Hiroshi, Imbasi, Precious, Anwar, M. Maqsud, Kitteringham, Neil, Park, B. Kevin, Souma, Tomokazu, Moriguchi, Takashi, Yamamoto, Masayuki and Thornalley, Paul J. (2012) Transcriptional control of glyoxalase 1 by Nrf2 provides a stress-responsive defence against dicarbonyl glycation. The Biochemical journal, Vol.443 (No.1). pp. 213-22. doi:10.1042/BJ20111648

Yang, G. K., Squires, Paul E., Tian, Faming, Kieffer, T. J., Kwok, Y. N. and Dale, Nicholas (2012) Glucose decreases extracellular adenosine levels in isolated mouse and rat pancreatic islets. Islets, Vol.4 (No.1). doi:10.4161/isl.4.1.19037

Yang, Weiming and McCrae, Malcolm A. (2012) The molecular biology of rotaviruses X : intercellular dissemination of rotavirus NSP4 requires glycosylation and is mediated by direct cell-cell contact through cytoplasmic extrusions. Archives of Virology, Vol.157 (No.2). pp. 305-314. doi:10.1007/s00705-011-1174-x

Yang, Weiming and McCrae, Malcolm A. (2012) The rotavirus enterotoxin (NSP4) promotes re-modeling of the intracellular microtubule network. Virus Research, Vol.163 (No.1). pp. 269-274. doi:10.1016/j.virusres.2011.10.011

Yang, Zheng Rong and Grant, Murray (2012) An ultra-fast metabolite prediction algorithm. PLoS One, 7 (6). pp. 1-11. e39158. doi:10.1371/journal.pone.0039158

Yoshida, Hisashi, Kawai, Fumihiro, Obayashi, Eiji, Akashi, Satoko, Roper, David I., Tame, Jeremy R.H. and Park, Sam-Yong (2012) Crystal structures of penicillin-binding protein 3 (PBP3) from methicillin-resistant staphylococcus aureus in the apo and cefotaxime‐bound forms. Journal of Molecular Biology, Volume 423 (Number 3). pp. 351-364. doi:10.1016/j.jmb.2012.07.012

(2012) Evolutionary dynamics of Staphylococcus aureus during progression from carriage to disease. Proceedings of the National Academy of Sciences of the United States of America, 109 (12). pp. 4550-4555. doi:10.1073/pnas.1113219109

Yum, J. H., Shin, H. S., Hill, R., Oh, J., Lee, H. D., Mushinski, Ryan , Hudnall, Todd W., Bielawski, C. W., Banerjee, S. K., Loh, W. Y., Wang, Wei-E. and Kirsch, Paul (2012) A study of capping layers for sulfur monolayer doping on III-V junctions. Applied Physics Letters, 101 (25). 253514. doi:10.1063/1.4772641

Zhang, Liangfen, Thomas, Jonathan C., Didelot, Xavier and Robinson, D. Ashley (2012) Molecular signatures identify a candidate target of balancing selection in an arcD-Like gene of Staphylococcus epidermidis. Journal of Molecular Evolution, 75 (1-2). pp. 43-54. doi:10.1007/s00239-012-9520-5

Zhou, Luxian, Pelengaris, Stella, Abouna, Sylvie, Young, James, Epstein, D. B. A., Herold, Julia, Nattkemper, Tim W., Nakhai, Hassan and Khan, Michael (2012) Re-expression of IGF-II is important for beta cell regeneration in adult mice. PLoS ONE, Vol.7 (No.9). e43623. doi:10.1371/journal.pone.0043623

Zhou, Tao, Zhang, Hang, Lai, Tongfei, Qin, Cheng, Shi, Nongnong, Wang, Huizhong, Jin, Mingfei, Zhong, Silin, Fan, Zaifeng, Liu, Yule, Wu, Zirong, Jackson, Stephen D. , Giovannoni, James J., Rolin, Dominique, Gallusci, Philippe and Hong, Yiguo (2012) Virus-induced gene complementation reveals a transcription factor network in modulation of tomato fruit ripening. Scientific Reports, Vol.2 . p. 836. doi:10.1038/srep00836

Zwick, M. E., Joseph, S. J., Didelot, Xavier, Chen, P. E., Bishop-Lilly, K. A., Stewart, A. C., Willner, K., Nolan, N., Lentz, S., Thomason, M. K., Sozhamannan, S., Mateczun, A. J., Du, L. and Read, T. D. (2012) Genomic characterization of the Bacillus cereus sensu lato species : backdrop to the evolution of Bacillus anthracis. Genome Research, 22 (8). pp. 1512-1524. doi:10.1101/gr.134437.111

da Silva, Krisle, de Souza Cassetari, Alice, Silva Lima, Adriana, De Brandt, Evie, Pinnock, Eleanor, Vandamme, Peter and de Souza Moreira, Fatima Maria (2012) Diazotrophic Burkholderia species isolated from the Amazon region exhibit phenotypical, functional and genetic diversity. Systematic and Applied Microbiology, Volume 35 (Number 4). pp. 253-262. doi:10.1016/j.syapm.2012.04.001

van Damme, Mireille, Bozkurt, Tolga O., Cakir, Cahid, Schornack, Sebastian, Sklenar, Jan, Jones, Alexandra M. and Kamoun, Sophien (2012) The Irish potato famine pathogen Phytophthora infestans translocates the CRN8 kinase into host plant cells. PLoS Pathogens, Volume 8 (Number 8). Article number e1002875. doi:10.1371/journal.ppat.1002875

van Helden, Mary J. G., Kooten, Peter J. S. van, Bekker, Cornelis P. J., Gröne, Andrea, Topham, David J., Easton, A. J. (Andrew J.), Boog, Claire J. P., Busch, Dirk H., Zaiss, Dietmar M. W. and Sijts, Alice J. A. M. (2012) Pre-existing virus-specific CD8+ T-cells provide protection against pneumovirus-induced disease in mice. Vaccine, Vol.30 (No.45). pp. 6382-6388. doi:10.1016/j.vaccine.2012.08.027

van Hoek, Albert Jan, Ngama, Mwanajuma, Ismail, Amina, Chuma, Jane, Cheburet, Samuel, Mutonga, David, Kamau, Tatu and Nokes, D. James (2012) A cost effectiveness and capacity analysis for the introduction of universal rotavirus vaccination in Kenya : comparison between Rotarix and RotaTeq vaccines. PLoS One, Vol.7 (No.10). e47511. doi:10.1371/journal.pone.0047511

Łabaj, Paweł P., Linggi, Bryan E., Wiley, H. Steven and Kreil, David (2012) Improving RNA-Seq precision with MapAl. Frontiers in Genetics, Vol.3 . doi:10.3389/fgene.2012.00028

Book Item

Dreyer, Antje, Stroh, Albrecht, Psel, Claudia, Findeisen, Matthias, von, Teresa, Lobsien, Donald, Nitzsche, Bjrn and Boltze, Johannes (2012) Frameless stereotaxy in sheep - neurosurgical and imaging techniques for translational stroke research. In: Balestrino, Maurizio, (ed.) Advances in the Preclinical Study of Ischemic Stroke. UNSPECIFIED. ISBN 9789535102908

Riegl, Bernhard M., Benzoni, Francesca, Samimi-Namin, Kaveh and Sheppard, Charles (Charles R. C.) (2012) The Hermatypic Scleractinian (hard) coral fauna of the gulf. In: Riegl, Bernhard M. and Purkis, Sam J., (eds.) Coral Reefs of the Gulf. Springer Netherlands, pp. 187-224. ISBN 9789400730076

Walsh, J.A. and Verbeek, M. (2012) Genus – Varicosavirus. In: Virus Taxonomy — Ninth Report of the International Committee on Taxonomy of Viruses. International Committee on Taxonomy of Viruses, Vol.9 . Elsevier, pp. 777-781. ISBN 978-0123-84684-6

Conference Item

Arnaud, E., Cooper, L., Shrestha, R., Menda, N., Nelson, R. T., Matteis, L., Skofic, M., Bastow, Ruth, Jaiswal, P., Mueller, L. and McLaren, G. (2012) Towards a reference plant trait ontology for modeling knowledge of plant traits and phenotypes. In: 4th International Conference on Knowledge Engineering and Ontology Development, KEOD 2012, Barcelona, Spain, 4-7 Oct 2012. Published in: KEOD 2012 - Proceedings of the International Conference on Knowledge Engineering and Ontology Development ISBN 9789898565303.

Probert, William J. M., McDonald-Madden, E., Peyrard, N. and Sabbadin, R. (2012) Computational issues surrounding the dynamic optimisation of management of an ecological food web. In: European Conference on Artificial Intelligence, Montpellier, France, 27-31 Aug 2012. Published in: Proceedings of the European Conference on Artificial Intelligence

Report

Gravel, Genevieve (2012) The use of a pediatric prophylactic vaccine for respiratory syncytial virus in Kenya. KEMRI-Wellcome Trust Research Programme.

Digital Scholarly Resource

Hussain (Hassan), Marwa and Azzazy, Hassan M. (2012) Direct detection of mycobacterium tuberculosis complex using gold nanoparticles. [Online]. (https://www.semanticscholar.org/paper/DIRECT-DETEC...).

Performance

Vicente, Joana G. (2012) Food Unwrapped : Black Rot bacteria is used to replace fat in light mayonnaise [Series 2 Episode 6]. [Performance] Wellesbourne Campus, University of Warwick, Coventry, United Kingdom. 22 October 2012.