Journal Article

Abuhammad, Areej, Fullam, Elizabeth, Lowe, Edward D., Staunton, David, Kawamura, Akane, Westwood, Isaac, Bhakta, Sanjib, Garner, Alun Christopher, Wilson, David L., Seden, Peter T., Davies, Stephen G., Russell, Angela J., Garman, Elspeth F. and Sim, Edith (2012) Piperidinols that show anti-tubercular activity as inhibitors of arylamine N-acetyltransferase: an essential enzyme for mycobacterial survival inside macrophages. PLoS One, Volume 7 (Number 12). Article number e52790. doi:10.1371/journal.pone.0052790

Agoti, Charles N., Mwihuri, Alexander G., Sande, Charles J., Onyango, Clayton O., Medley, Graham, Cane, Patricia and Nokes, D. James (2012) Genetic relatedness of infecting and reinfecting respiratory syncytial virus strains identified in a birth cohort from rural Kenya. Journal of Infectious Diseases, Volume 206 (Number 10). pp. 1532-1541. doi:10.1093/infdis/jis570

Albiniak, A. M., Baglieri, J. and Robinson, Colin (2012) Targeting of lumenal proteins across the thylakoid membrane. Journal of Experimental Botany, Vol.63 (No.4). pp. 1689-1698. doi:10.1093/jxb/err444

Almeida, André M., Parreira, José R., Santos, Romana, Duque, Ana Sofia, Francisco, Rita, Tomé, Daniel F. A., Ricardo, Cândido Pinto, Coelho, Ana Varela and Fevereiro, Pedro (2012) A proteomics study of the induction of somatic embryogenesis in Medicago truncatula using 2DE and MALDI-TOF/TOF. Physiologia Plantarum, Volume 146 (Number 2). pp. 236-249. doi:10.1111/j.1399-3054.2012.01633.x

Anderson, Roy M., Hollingsworth, T. Déirdre, Truscott, James E. and Brooker, Simon J. (2012) Optimisation of mass chemotherapy to control soil-transmitted helminth infection. The Lancet, Vol.379 (No.9813). pp. 289-290. doi:10.1016/S0140-6736(12)60460-7

Andres-Enguix, Isabelle, Shang, Lijun, Stansfeld, Phillip J., Morahan, Julia M., Sansom, Mark S. P., Lafrenière, Ronald G., Roy, Bishakha, Griffiths, Lyn R., Rouleau, Guy A., Ebers, George C., Cader, Zameel M. and Tucker, Stephen J. (2012) Functional analysis of missense variants in the TRESK (KCNK18) K+ channel. Scientific Reports, 2 (1). 237 . doi:10.1038/srep00237

Armengaud, Jean, Christie-Oleza, Joseph Alexander, Clair, Gérémy, Malard, Véronique and Duport, Catherine (2012) Exoproteomics : exploring the world around biological systems. Expert Review of Proteomics, Vol.9 (No.5). pp. 561-575. doi:10.1586/epr.12.52

Asally, Munehiro, Kittisopikul, M., Rue, P., Du, Y., Hu, Z., Cagatay, T., Robinson, A. B., Lu, H., Garcia-Ojalvo, Jordi and Suel, G. M. (2012) Localized cell death focuses mechanical forces during 3D patterning in a biofilm. Proceedings of the National Academy of Sciences of the United States of America, 109 (46). pp. 18891-18896. doi:10.1073/pnas.1212429109

Bagavathiannan, M. V., Norsworthy, J. K. (Jason K.), Smith, K. L. (Kenneth L.) and Neve, Paul (2012) Seed production of barnyardgrass (Echinochloa crus-galli) in response to time of emergence in cotton and rice. The Journal of Agricultural Science, Vol.150 (No.6). pp. 717-724. doi:10.1017/S0021859611000876

Baglieri, J., Beck, D., Vasisht, Nishi, Smith, Corinne J. and Robinson, Colin (2012) Structure of TatA paralog, TatE, suggests a tructurally homogeneous form of Tat protein translocase that transports folded proteins of differing diameter. Journal of Biological Chemistry, Vol.287 (No.10). pp. 7335-7344. doi:10.1074/jbc.M111.326355

Baglieri, J., Beck, Daniel, Vasisht, Nishi, Smith, Corinne J. and Robinson, Colin (2012) Structure of TatA Paralog, TatE, suggests a structurally homogeneous form of Tat protein translocase that transports folded proteins of differing diameter. Journal of Biological Chemistry, 287 (10). pp. 7335-7344. doi:10.1074/jbc.M111.326355

Baltrus, David A., Nishimura, Marc T., Dougherty, Kevin M., Biswas, Surojit, Mukhtar, M. Shahid, Vicente, Joana G., Holub, E. B. and Dangl, J. L. (Jeffery L.) (2012) The molecular basis of host specialization in bean pathovars of Pseudomonas syringae. Molecular Plant-Microbe Interactions, Vol.25 (No.7). pp. 877-888. doi:10.1094/MPMI-08-11-0218

Baranski, Rafal, Allender, Charlotte J. and Klimek-Chodacka, Magdalena (2012) Towards better tasting and more nutritious carrots: Carotenoid and sugar content variation in carrot genetic resources. Food Research International, Vol. 47 (No. 2). pp. 182-187. doi:10.1016/j.foodres.2011.05.006

Barbez, E., Kubes, M., Rolcik, J., Beziat, C., Pencik, A., Wang, B., Rosquete, M. R., Zhu, J., Dobrev, P. I., Lee, Y., Zazimalova, E., Petrasek , J., Geisler, M., Friml, J. and Kleine-Vehn, J. (2012) A novel putative auxin carrier family regulates intracellular auxin homeostasis in plants. Nature, 485 (7396). pp. 119-122. doi:10.1038/nature11001

Barker, Z. E., Wright, Jordan L., Blowey, R. W., Armory, J. R. and Green, Laura E. (2012) Uptake and effectiveness of interventions to reduce claw lesions in 40 dairy herds in the UK. Animal Welfare, Volume 21 (Number 4). pp. 563-576. doi:10.7120/09627286.21.4.563

Barnett, James P., Millard, Andrew D., Ksibe, Amira Z., Scanlan, David J., Schmid, Ralf and Blindauer, Claudia A. (2012) Mining genomes of marine cyanobacteria for elements of zinc homeostasis. Frontiers in Microbiology, Volume 3 . Article number 142. doi:10.3389/fmicb.2012.00142

Barnett, James P., Scanlan, David J. and Blindauer, Claudia A. (2012) Fractionation and identification of metalloproteins from a marine cyanobacterium. Analytical and Bioanalytical Chemistry, Vol.402 (No.10). pp. 3371-3377. doi:10.1007/s00216-011-5708-6

Barrett, Perry and Bolborea, Matei (2012) Molecular pathways involved in seasonal body weight and reproductive responses governed by melatonin. Journal of Pineal Research , 52 (4). pp. 376-388. doi:10.1111/j.1600-079X.2011.00963.x

Barton, Nick H., Cadillo-Quiroz, Hinsby, Didelot, Xavier, Held, Nicole L., Herrera, Alfa, Darling, Aaron, Reno, Michael L., Krause, David J. and Whitaker, Rachel J. (2012) Patterns of gene flow define species of Thermophilic Archaea. PLoS Biology, 10 (2). e1001265. doi:10.1371/journal.pbio.1001265

Bassel, George, Gaudinier, Allison, Brady, Siobhan M., Hennig, Lars, Rhee, Seung Y. and De Smet, Ive (2012) Systems analysis of plant functional, transcriptional, physical interaction, and metabolic networks. The Plant Cell, 24 (10). pp. 3859-3875. doi:10.1105/tpc.112.100776

The International Arabidopsis Informatics Consortium (Including: Bastow, Ruth). (2012) Taking the next step : building an arabidopsis information portal. The Plant Cell, 24 (6). pp. 2248-2256. doi:10.1105/tpc.112.100669

Baxter, Laura, Jironkin, Aleksey, Hickman, R. D. G., Moore, Jonathan D., Barrington, Christopher, Krusche, Peter, Dyer, Nigel, Buchanan-Wollaston, Vicky, Tiskin, Alexander, Beynon, Jim, Denby, Katherine J. and Ott, Sascha (2012) Conserved noncoding sequences highlight shared components of regulatory networks in dicotyledonous plants. The Plant Cell, Vol.24 (No.10). pp. 3949-3965. doi:10.1105/tpc.112.103010

Becraft, Philip W. and Gutierrez-Marcos, José F. (2012) Endosperm development : dynamic processes and cellular innovations underlying sibling altruism. Wiley Interdisciplinary Reviews: Developmental Biology, Volume 1 (Number 4). pp. 579-593. doi:10.1002/wdev.31

Behjati, Mohaddeseh, Torktaz, Ibrahim, Mohammadpour, Mehrdad, Ahmadian, Gholamreza and Easton, A. J. (Andrew J.) (2012) Comparative modeling of CCRL1, a key protein in masked immune diseases and virtual screening for finding inhibitor of this protein. Bioinformation, Vol.8 (No.7). pp. 336-340. doi:10.6026/97320630008336

Bhagooli, R. and Sheppard, Charles (Charles R. C.) (2012) Prediction of recurrences of mass coral bleaching / mortality and vulnerability of reef-building corals to climate change in Mauritian and Japanese waters. University of Mauritius research journal, Volume 18A . pp. 105-121.

Boltze, Johannes, Schmidt, Uwe R., Reich, Doreen M., Kranz, Alexander, Reymann, Klaus G., Strassburger, Maria, Lobsien, Donald, Wagner, Daniel-Christoph, Förschler, Annette and Schäbitz, Wolf-Rüdiger (2012) Determination of the therapeutic time window for human umbilical cord blood mononuclear cell transplantation following experimental stroke in rats. Cell Transplantation, 21 (6). pp. 1199-1211. doi:10.3727/096368911X589609

Booyjzsen, Claire, Scarff, Charlotte A., Moreton, Ben, Portman, Ian J., Scrivens, James H., Costantini, Giovanni and Sadler, P. J. (2012) Fibrillation of transferrin. Biochimica et Biophysica Acta (BBA) - General Subjects, Vol.1820 (No.3). pp. 427-436. doi:10.1016/j.bbagen.2011.11.004

Bouman, Heather A., Lepère, Cécile, Scanlan, David J. and Osvaldo, Ulloa (2012) Phytoplankton community structure in a high-nutrient, low-chlorophyll region of the eastern Pacific Subantarctic region during winter-mixed and summer-stratified conditions. Deep Sea Research Part I : Oceanographic Research Papers, Volume 69 . pp. 1-11. doi:10.1016/j.dsr.2012.04.008

Brookes, Emily, de Santiago, Inês, Hebenstreit, Daniel, Morris, Kelly J., Carroll, Tom, Xie, Sheila Q., Stock, Julie K., Heidemann, Martin, Eick, Dirk, Nozaki, Naohito, Kimura, Hiroshi, Ragoussis, Jiannis, Teichmann, Sarah A. and Pombo, Ana (2012) Polycomb associates genome-wide with a specific RNA polymerase II variant, and regulates metabolic genes in ESCs. Cell Stem Cell, Vol. 10 (No. 2). pp. 157-170. doi:10.1016/j.stem.2011.12.017

Bull, James C., Kenyon, Emma J. and Cook, Kevan J. (2012) Wasting disease regulates long-term population dynamics in a threatened seagrass. Oecologia , Volume 169 (Number 1). pp. 135-142. doi:10.1007/s00442-011-2187-6

Bull, James C., Ryabov, Eugene V., Prince, Gillian, Mead, A. (Andrew), Zhang, Cunjin, Baxter, Laura, Pell, Judith K., Osborne, Juliet L. and Chandler, Dave (2012) A strong immune response in young adult honeybees masks their increased susceptibility to infection compared to older bees. PLoS Pathogens, Vol.8 (No.12). e1003083. doi:10.1371/journal.ppat.1003083

Burgess, P. J., Rivas Casado, Monica, Gavu, Jerry, Mead, A. (Andrew), Cockerill, Tim, Lord, Richard, Van der Horst, Dan and Howard, D. C. (2012) A framework for reviewing the trade-offs between renewable energy, food, feed and wood production at a local level. Renewable and Sustainable Energy Reviews , Vol.16 (No.1). pp. 129-142. doi:10.1016/j.rser.2011.07.142

Burkhardt, Jana, Kirsten, Holger, Holland, Heidrun, Krupp, Wolfgang, Ligges, Carolin, Quente, Elfi, Boltze, Johannes, Ahnert, Peter and Wilcke, Arndt (2012) Association of rs2069459 in the CDK5 gene with dyslexia in a German cohort. Psychiatric Genetics, 22 (6). pp. 307-308. doi:10.1097/YPG.0b013e328353aeae

Burns, Ian G., Durnford, James, Lynn, James, McClement, Sandy, Hand, Paul and Pink, David (2012) The influence of genetic variation and nitrogen source on nitrate accumulation and iso-osmotic regulation by lettuce. Plant and Soil, Vol.352 (No.1-2). pp. 321-339. doi:10.1007/s11104-011-0999-0

Calderón Villalobos, Luz Irina A, Lee, Sarah C., Oliveira, Cesar de, Ivetac, Anthony, Brandt, Wolfgang, Armitage, Lynne, Sheard, Laura B., Tan, Xu, Parry, Geraint, Mao, Haibin, Zheng, Ning, Napier, R. (Richard), Kepinski, Stefan and Estelle, Mark (2012) A combinatorial TIR1/AFB–Aux/IAA co-receptor system for differential sensing of auxin. Nature Chemical Biology, Volume 8 (Number 5). pp. 477-485. doi:10.1038/nchembio.926

Calleja, E., Ilbery, B. and Mills, P. R. (2012) Agricultural change and the rise of the British strawberry industry, 1920–2009. Journal of Rural Studies, Volume 28 (Number 4). pp. 603-611. doi:10.1016/j.jrurstud.2012.07.005

Calleja, E., Ilbery, B., Spence, N. J. and Mills, P. R. (2012) The effectiveness of phytosanitary controls in preventing the entry of Colletotrichum acutatumin the UK strawberry sector. Plant Pathology, Volume 62 (Number 2). pp. 266-278. doi:10.1111/j.1365-3059.2012.02647.x

Carbonero, Franck, Oakley, Brian B., Hawkins, Robert J. and Purdy, Kevin J. (2012) Genotypic distribution of a specialist model microorganism, methanosaeta, along an estuarine gradient : does metabolic restriction limit niche differentiation potential? Microbial Ecology, 63 (4). pp. 856-864. doi:10.1007/s00248-011-9993-6

Carpenter, Byron, Hemsworth, Glyn R., Wu, Zida, Maamra, Mabrouka, Strasburger, Christian J., Ross, Richard J. and Artymiuk, Peter J. (2012) Structure of the human obesity receptor leptin-binding domain reveals the mechanism of leptin antagonism by a monoclonal antibody. Structure, 20 (3). pp. 487-497. doi:10.1016/j.str.2012.01.019

Carrera, Javier, Elena, Santiago F. and Jaramillo, Alfonso (2012) Computational design of genomic transcriptional networks with adaptation to varying environments. Proceedings of the National Academy of Sciences of the United States of America, 109 (38). pp. 15277-82. doi:10.1073/pnas.1200030109

Cevik, Volkan, Kidd, B. N., Zhang, P., Hills, Claire E., Kiddle, Steven J., Denby, Katherine J., Holub, E. B., Cahill, D. M., Manners, J. M., Schenk, P. M., Beynon, Jim and Kazan, K. (2012) MEDIATOR25 acts as an integrative hub for the regulation of jasmonate-responsive gene expression in Arabidopsis. Plant Physiology, Vol.160 (No.1). pp. 541-555. doi:10.1104/pp.112.202697

Cevik, Volkan, Kidd, B. N., Zhang, Peijun, Hills, Claire E., Kiddle, Steven J., Denby, Katherine J., Holub, E. B., Cahill, D. M., Manners, J. M., Schenk, P. M., Beynon, Jim and Kazan, K. (2012) MEDIATOR25 acts as an integrative Hub for the regulation of jasmonate-responsive gene expression in arabidopsis. Plant Physiology, Volume 160 (Number 1). pp. 541-555. doi:10.1104/pp.112.202697

Chapman, N. H., Bonnet, J., Grivet, L., Lynn, J., Graham, N., Smith, R., Sun, Guangai, Walley, Peter Glen, Poole, M., Causse, M., King, G. J., Baxter, C. and Seymour, G. B. (Graham B.) (2012) High-resolution mapping of a fruit firmness-related quantitative trait locus in tomato reveals epistatic interactions associated with a complex combinatorial locus. Plant Physiology, Volume 159 (Number 4). pp. 1644-1657. doi:10.1104/pp.112.200634

Chen, Jing, Huang, P. T., Zhang, K. Y. and Ding, F. R. (2012) Isolation of biosurfactant producers, optimization and properties of biosurfactant produced by Acinetobacter sp. from petroleum-contaminated soil. Journal of Applied Microbiology, 112 (4). pp. 660-671. doi:10.1111/j.1365-2672.2012.05242.x

Chen, Shuo, Huang, Ziliang, Wu, Jingjun, Chen, Yin, Ye, Fengchun, Zhang, Chong, Yatsunami, Rie, Nakamura, Satoshi and Xing, Xin-Hui (2012) Combination of site-directed mutagenesis and calcium ion addition for enhanced production of thermostable MBP-fused heparinase I in recombinant Escherichia coli. Applied Microbiology and Biotechnology, Volume 97 (Issue 7). pp. 2907-2916. doi:10.1007/s00253-012-4145-6

Chen, Yin (2012) Comparative genomics of methylated amine utilization by marine Roseobacter clade bacteria and development of functional gene markers (tmm, gmaS). Environmental Microbiology, Volume 14 (Number 9). pp. 2308-2322. doi:10.1111/j.1462-2920.2012.02765.x

Chope, G. A., Cools, K., Hammond, John P., Thompson, Andrew J. and Terry, L. A. (2012) Physiological, biochemical and transcriptional analysis of onion bulbs during storage. Annals of Botany, Vol.109 (No.4). pp. 819-831. doi:10.1093/aob/mcr318

Christie-Oleza, Joseph Alexander, Fernandez, Bernard, Nogales, Balbina, Bosch, Rafael and Armengaud, Jean (2012) Proteomic insights into the lifestyle of an environmentally relevant marine bacterium. The ISME Journal, Volume 6 (Number 1). pp. 124-135. doi:10.1038/ismej.2011.86

Christie-Oleza, Joseph Alexander, Miotello, Guylaine and Armengaud, Jean (2012) High-throughput proteogenomics of Ruegeria pomeroyi : seeding a better genomic annotation for the whole marine Roseobacter clade. BMC Genomics, Volume 13 (Number 1). Article number 73. doi:10.1186/1471-2164-13-73

Christie-Oleza, Joseph Alexander, Pina-Villalonga, J. M., Bosch, R., Nogales, B. and Armengaud, J. (2012) Comparative proteogenomics of twelve roseobacter exoproteomes reveals different adaptive strategies among these marine bacteria. Molecular & Cellular Proteomics, Volume 11 (Number 2). Article number M111.013110. doi:10.1074/mcp.M111.013110

Clark, Corinna C. A., Gruffydd-Jones, Timothy and Murray, Jane K. (2012) Number of cats and dogs in UK welfare organisations. Veterinary Record, 170 (19). p. 493. doi:10.1136/vr.100524

Clarkson, John P., Coventry, E., Kitchen, James, Carter, H. E. and Whipps, J. M. (2012) Population structure of Sclerotinia sclerotiorum in crop and wild hosts in the UK. Plant Pathology, Volume 62 (Number 2). pp. 309-324. doi:10.1111/j.1365-3059.2012.02635.x

Coelho, Paula S., Vicente, Joana G., Monteiro, António A. and Holub, E. B. (2012) Pathotypic diversity of Hyaloperonospora brassicae collected from Brassica oleracea. European Journal of Plant Pathology, Vol.134 (No.4). pp. 763-771. doi:10.1007/s10658-012-0052-z

Collins-Hooper, Henry, Woolley, Thomas E., Dyson, Louise, Patel, Anand, Potter, Paul, Baker, Ruth E., Gaffney, Eamonn A., Maini, Philip K., Dash, Philip R. and Patel, Ketan (2012) Age-related changes in speed and mechanism of adult skeletal muscle stem cell migration. Stem Cells, 30 (6). pp. 1182-1195. doi:10.1002/stem.1088

Cope, G. F., Wu, Houdini Ho Tin, O'Donovan, G. V. and Milburn, H. J. (2012) A new point of care cotinine test for saliva to identify and monitor smoking habit. European Respiratory Journal, Volume 40 (Number 2). pp. 496-497. doi:10.1183/09031936.00219011

Corrêa, Sônia A. L. and Eales, Katherine L. (2012) The role of p38 MAPK and its substrates in neuronal plasticity and neurodegenerative disease. Journal of Signal Transduction, Vol.2012 . Article no. 649079. doi:10.1155/2012/649079

Corrêa, Sônia A. L., Hunter, Christopher J., Palygin, Oleg, Wauters, Sandrine, Martin, Kirsty J., McKenzie, Colin, McKelvey, Kim M. (Kim Martin), Morris, R. G. M. (Richard G. M.), Pankratov, Yuriy, Arthur, J. Simon C. and Frenguelli, Bruno G. (2012) MSK1 regulates homeostatic and experience-dependent synaptic plasticity. Journal of Neuroscience, Vol.32 (No.38). pp. 13039-13051. doi:10.1523/JNEUROSCI.0930-12.2012

Costa, Liliana M., Yuan, Jing, Rouster, Jacques, Paul, Wyatt, Dickinson, Hugh and Gutierrez-Marcos, José F. (2012) Maternal control of nutrient allocation in plant seeds by genomic imprinting. Current Biology, Vol.22 (No.2). pp. 160-165. doi:10.1016/j.cub.2011.11.059

Cox, Michael J., Schäfer, Hendrik, Nightingale, Phillip D., McDonald, Ian R. and Murrell, J. C. (J. Colin) (2012) Diversity of methyl halide-degrading microorganisms in oceanic and coastal waters. FEMS Microbiology Letters, Vol.334 (No.2). pp. 111-118. doi:10.1111/j.1574-6968.2012.02624.x

Crow, Allister, Hughes, R. K., Taieb, F., Oswald, E. and Banfield, M. J. (2012) The molecular basis of ubiquitin-like protein NEDD8 deamidation by the bacterial effector protein Cif. Proceedings of the National Academy of Sciences of the United States of America, 109 (27). E1830-E1838. doi:10.1073/pnas.1112107109

Dale, Nicholas (2012) A classic review on extracellular ATP and its signalling functions that helped to define the field's agenda for many years. Biochemical Journal, Volume 2012 (Number 1). c3-c6. doi:10.1042/BJ20121145

Dale, Nicholas and Frenguelli, Bruno G. (2012) Measurement of purine release with microelectrode biosensors. Purinergic Signalling, Vol.8 (No.S1). pp. 27-40. doi:10.1007/s11302-011-9273-4

Danon, Leon, House, Thomas A., Read, Jonathan M. and Keeling, Matthew James (2012) Social encounter networks : collective properties and disease transmission. Journal of The Royal Society Interface, Vol.9 (No.76). pp. 2826-2833. doi:10.1098/rsif.2012.0357

Davies, Oluwafemi, Mendes, Pedro, Smallbone, Kieran and Malys, Naglis (2012) Characterisation of multiple substrate-specific (d)ITP/(d)XTPase and modelling of deaminated purine nucleotide metabolism. BMB Reports , Vol.45 (No.4). pp. 259-264. doi:10.5483/BMBRep.2012.45.4.259

Denecke, J., Aniento, F., Frigerio, Lorenzo, Hawes, C., Hwang, I., Mathur, J., Neuhaus, J.-M. and Robinson, D. G. (2012) Secretory pathway research : the more experimental systems the better. The Plant Cell, Volume 24 (Number 4). pp. 1316-1326. doi:10.1105/tpc.112.096362

Dickinson, Hugh, Costa, Liliana and Gutierrez-Marcos, José F. (2012) Epigenetic neofunctionalisation and regulatory gene evolution in grasses. Trends in Plant Science, Vol.17 (No.7). pp. 389-394. doi:10.1016/j.tplants.2012.04.002

Didelot, Xavier, Bowden, Rory, Wilson, Daniel J., Peto, Tim E. A. and Crook, Derrick W. (2012) Transforming clinical microbiology with bacterial genome sequencing. Nature Reviews Genetics , 13 (9). pp. 601-612. doi:10.1038/nrg3226

(2012) Microevolutionary analysis of Clostridium difficile genomes to investigate transmission. Genome Biology, 13 (12). R118. doi:10.1186/gb-2012-13-12-r118

Didelot, Xavier, Méric, Guillaume, Falush, Daniel and Darling, Aaron E (2012) Impact of homologous and non-homologous recombination in the genomic evolution of Escherichia coli. BMC Genomics, 13 (1). p. 256. doi:10.1186/1471-2164-13-256

Dimmock, N. J., Dove, Brian K., Meng, Bo, Scott, P. D. (Paul D.), Taylor, Irene, Cheung, Linda, Hallis, Bassam, Marriott, Anthony C., Carroll, Miles W. and Easton, A. J. (Andrew J.) (2012) Comparison of the protection of ferrets against pandemic 2009 influenza A virus (H1N1) by 244 DI influenza virus and oseltamivir. Antiviral Research, Vol.96 (No.3). pp. 376-385. doi:10.1016/j.antiviral.2012.09.017

Dimmock, N. J., Dove, Brian K., Scott, P. D. (Paul D.), Meng, Bo, Taylor, Irene, Cheung, Linda, Hallis, Bassam, Marriott, Anthony C., Carroll, Miles W. and Easton, A. J. (Andrew J.) (2012) Cloned defective interfering influenza virus protects ferrets from pandemic 2009 influenza A virus and allows protective immunity to be established. PLoS ONE, Vol.7 (No.12). e49394. doi:10.1371/journal.pone.0049394

Dingle, Kate E., Didelot, Xavier, Ansari, M. Azim, Eyre, David W., Vaughan, Alison, Griffiths, David, Ip, Camilla L. C., Batty, Elizabeth M., Golubchik, Tanya, Bowden, Rory, Jolley, Keith A., Hood, Derek W., Fawley, Warren N., Walker, A. Sarah, Peto, Timothy E., Wilcox, Mark H. and Crook, Derrick W. (2012) Recombinational switching of the Clostridium difficile S-Layer and a novel glycosylation gene cluster revealed by large-scale whole-genome sequencing. The Journal of Infectious Diseases, 207 (4). pp. 675-686. doi:10.1093/infdis/jis734

Ditchfield, A. K., Wilson, S. T., Hart, M. C., Purdy, Kevin J., Green, D. H. and Hatton, A. D. (2012) Identification of putative methylotrophic and hydrogenotrophic methanogens within sedimenting material and copepod faecal pellets. Aquatic Microbial Ecology, Vol.67 (No.2). pp. 151-160. doi:10.3354/ame01585

Dixon, Neil, Robinson, Christopher J., Geerlings, Torsten, Duncan, John, Drummond, Sheona P. and Micklefield, Jason (2012) Orthogonal riboswitches for tuneable coexpression in bacteria. Angewandte Chemie International Edition, 51 (15). pp. 3620-3624. doi:10.1002/anie.201109106

Dove, Andrew P. (2012) Organic catalysis for ring-opening polymerization. ACS Macro Letters, Vol.1 (No.12). pp. 1409-1412. doi:10.1021/mz3005956

Edgar, J. L., Nicol, C. J., Clark, Corinna C. A. and Paul, E. S. (2012) Measuring empathic responses in animals. Applied Animal Behaviour Science, 138 (3-4). pp. 182-193. doi:10.1016/j.applanim.2012.02.006

Eichmann, Ruth and Schäfer, P. (Patrick) (2012) The endoplasmic reticulum in plant immunity and cell death. Frontiers in Plant Science, Volume 3 . Article number 200. doi:10.3389/fpls.2012.00200

Ernst, A. M., Jekat, S. B., Zielonka, S., Muller, B., Neumann, U., Ruping, B., Twyman, R. M., Krzyzanek, V., Prufer, D. and Noll, G. A. (2012) Sieve element occlusion (SEO) genes encode structural phloem proteins involved in wound sealing of the phloem. Proceedings of the National Academy of Sciences of the United States of America, Volume 109 (Number 28). E1980-E1989. doi:10.1073/pnas.1202999109

Evans, Jennifer S., Horton, Daniel L., Easton, A. J. (Andrew J.), Fooks, Anthony R. and Banyard, Ashley C. (2012) Rabies virus vaccines : is there a need for a pan-lyssavirus vaccine? Vaccine, Vol.30 (No.52). pp. 7447-7454. doi:10.1016/j.vaccine.2012.10.015

(2012) A pilot study of rapid benchtop sequencing of Staphylococcus aureusand Clostridium difficilefor outbreak detection and surveillance. BMJ Open, 2 (3). e001124. doi:10.1136/bmjopen-2012-001124

Fan, Jun, Mohareb, Fady, Jones, Alexandra M. and Bessant, Conrad (2012) MRMaid : the SRM assay design tool for Arabidopsis and other species. Frontiers in Plant Science, Volume 3 . Article number 164. doi:10.3389/fpls.2012.00164

Farre, Gemma, Naqvi, Shaista, Sanahuja, Georgina, Bai, Chao, Zorrilla-López, Uxue, Rivera, Sol M., Canela, Ramon, Sandman, Gerhard, Twyman, Richard M., Capell, Teresa, Zhu, Changfu and Christou, Paul (2012) Combinatorial genetic transformation of cereals and the creation of metabolic libraries for the carotenoid pathway. Methods in Molecular Biology, Vol.847 . pp. 419-435. doi:10.1007/978-1-61779-558-9_33

Finch, Stanley and Collier, Rosemary (2012) The influence of host and non-host companion plants on the behaviour of pest insects in field crops. Entomologia Experimentalis et Applicata, Vol.142 (No.2). pp. 87-96. doi:10.1111/j.1570-7458.2011.01191.x

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(2012) Reefs and islands of the Chagos Archipelago, Indian Ocean : why it is the world's largest no-take marine protected area. Aquatic Conservation: Marine and Freshwater Ecosystems, Volume 22 (Number 2). pp. 232-2361. doi:10.1002/aqc.1248

(2012) Progressive genome-wide introgression in agricultural Campylobacter coli. Molecular Ecology, 22 (4). pp. 1051-1064. doi:10.1111/mec.12162

Smith, Claire M., Djakow, Jana, Free, Robert C., Djakow, Petr, Lonnen, Rana, Williams, Gwyneth, Pohunek, Petr, Hirst, Robert A., Easton, A. J. (Andrew J.), Andrew, Peter W. and O’Callaghan, Christopher (2012) ciliaFA : a research tool for automated, high-throughput measurement of ciliary beat frequency using freely available software. Cilia, Volume 1 (Number 1). Article no. 14. doi:10.1186/2046-2530-1-14

Smith, Corinne J. (2012) Size doesn't matter! The importance of size variability in coated vesicles. Developmental Cell, Volume 23 (Number 1). pp. 9-10. doi:10.1016/j.devcel.2012.06.017

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Snelling, Jonathon R., Scarff, Charlotte A. and Scrivens, James H. (2012) Characterization of complex polysorbate formulations by means of shape-selective mass spectrometry. Analytical Chemistry, Volume 84 (Number 15). pp. 6521-6529. doi:10.1021/ac300779p

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Wagner, Daniel-Christoph, Bojko, Mitja, Peters, Myriam, Lorenz, Marlene, Voigt, Cornelia, Kaminski, Alexander, Hasenclever, Dirk, Scholz, Markus, Kranz, Alexander, Weise, Gesa and Boltze, Johannes (2012) Impact of age on the efficacy of bone marrow mononuclear cell transplantation in experimental stroke. Experimental & Translational Stroke Medicine, 4 (1). 17. doi:10.1186/2040-7378-4-17

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Walley, Peter Glen, Teakle, Graham R., Moore, Jonathan D., Allender, Charlotte J., Pink, David A. C., Buchanan-Wollaston, Vicky and Barker, Guy C. (2012) Developing genetic resources for pre-breeding in Brassica oleracea L. : an overview of the UK perspective. Journal of Plant Biotechnology, Volume 39 (Number 1). pp. 62-68. doi:10.5010/JPB.2012.39.1.062

Wang, Yi-Fang, Khan, Michael and Berg, Hugo van den (2012) Interaction of fast and slow dynamics in endocrine control systems with an application to β-cell dynamics. Mathematical Biosciences, Vol.235 (No.1). pp. 8-18. doi:10.1016/j.mbs.2011.10.003

Wang, Yun, Chen, Yin, Zhou, Qian, Huang, Shi, Ning, Kang, Xu, Jian, Kalin, Robert M., Rolfe, Stephen A. and Huang, Wei E. (2012) A culture-independent approach to unravel uncultured bacteria and functional genes in a complex microbial community. PLoS One, Vol.7 (No.10). e47530. doi:10.1371/journal.pone.0047530

Wasukira, Arthur, Tayebwa, Johnbosco, Thwaites, Richard, Paszkiewicz, Konrad, Aritua, Valente, Kubiriba, Jerome, Smith, Julian, Grant, Murray and Studholme, David J. (2012) Genome-wide sequencing reveals two major sub-lineages in the genetically monomorphic pathogen xanthomonas campestris pathovar musacearum. Genes, 3 (4). pp. 361-377. doi:10.3390/genes3030361

Webb, Clare, Ngama, Mwanajuma, Ngatia, Anthony, Shebbe, Mohammed, Morpeth, Susan, Mwarumba, Salim, Bett, Ann, Nokes, D. James, Seale, Anna C., Kazungu, Sidi, Munywoki, Patrick, Hammitt, Laura L., Scott, J Anthony G. and Berkley, James A. (2012) Treatment failure among Kenyan children with severe pneumonia--a cohort study. The Pediatric infectious disease journal, Volume 31 (Number 9). e152-e157. doi:10.1097/INF.0b013e3182638012

Wemhöner, Konstantin, Silbernagel, Nicole, Marzian, Stefanie, Netter, Michael F., Rinné, Susanne, Stansfeld, Phillip J. and Decher, Niels (2012) A leucine zipper motif essential for gating of hyperpolarization-activated channels. Journal of Biological Chemistry, 287 (48). pp. 40150-40160. doi:10.1074/jbc.M112.378513

Wentzel, Alexander, Bruheim, Per, Øverby, Anders, Jakobsen, Øyvind M, Sletta, Håvard, Omara, Walid A. M., Hodgson, D. A. and Ellingsen, Trond E. (2012) Optimized submerged batch fermentation strategy for systems scale studies of metabolic switching in Streptomyces coelicolor A3(2). BMC Systems Biology, Volume 6 . Article number 59. doi:10.1186/1752-0509-6-59

Wilcke, Arndt, Ligges, Carolin, Burkhardt, Jana, Alexander, Michael, Wolf, Christiane, Quente, Elfi, Ahnert, Peter, Hoffmann, Per, Becker, Albert, Müller-Myhsok, Bertram, Cichon, Sven, Boltze, Johannes and Kirsten, Holger (2012) Imaging genetics of FOXP2 in dyslexia. European Journal of Human Genetics, 20 (2). pp. 224-229. doi:10.1038/ejhg.2011.160

(2012) Arabidopsis defense against Botrytis cinerea : chronology and regulation deciphered by high-resolution temporal transcriptomic analysis. The Plant Cell, Vol.24 (No.9). pp. 3530-3557. doi:10.1105/tpc.112.102046

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Xie, Qing, Chen, Xiangmei, Lu, Fengmin, Zhang, Ting, Hao, Meili, Wang, Yongfeng, Zhao, Jingmin, McCrae, Malcolm A. and Zhuang, Hui (2012) Aberrant expression of microRNA 155 may accelerate cell proliferation by targeting sex-determining region Y box 6 in hepatocellular carcinoma. Cancer, Volume 118 (Number 9). pp. 2431-2442. doi:10.1002/cncr.26566

Xue, Mingzhan, Rabbani, Naila, Momiji, Hiroshi, Imbasi, Precious, Anwar, M. Maqsud, Kitteringham, Neil, Park, B. Kevin, Souma, Tomokazu, Moriguchi, Takashi, Yamamoto, Masayuki and Thornalley, Paul J. (2012) Transcriptional control of glyoxalase 1 by Nrf2 provides a stress-responsive defence against dicarbonyl glycation. The Biochemical journal, Vol.443 (No.1). pp. 213-22. doi:10.1042/BJ20111648

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Book Item

Dreyer, Antje, Stroh, Albrecht, Psel, Claudia, Findeisen, Matthias, von, Teresa, Lobsien, Donald, Nitzsche, Bjrn and Boltze, Johannes (2012) Frameless stereotaxy in sheep - neurosurgical and imaging techniques for translational stroke research. In: Balestrino, Maurizio, (ed.) Advances in the Preclinical Study of Ischemic Stroke. UNSPECIFIED. ISBN 9789535102908

Riegl, Bernhard M., Benzoni, Francesca, Samimi-Namin, Kaveh and Sheppard, Charles (Charles R. C.) (2012) The Hermatypic Scleractinian (hard) coral fauna of the gulf. In: Riegl, Bernhard M. and Purkis, Sam J., (eds.) Coral Reefs of the Gulf. Springer Netherlands, pp. 187-224. ISBN 9789400730076

Walsh, J.A. and Verbeek, M. (2012) Genus – Varicosavirus. In: Virus Taxonomy — Ninth Report of the International Committee on Taxonomy of Viruses. International Committee on Taxonomy of Viruses, Vol.9 . Elsevier, pp. 777-781. ISBN 978-0123-84684-6

Conference Item

Arnaud, E., Cooper, L., Shrestha, R., Menda, N., Nelson, R. T., Matteis, L., Skofic, M., Bastow, Ruth, Jaiswal, P., Mueller, L. and McLaren, G. (2012) Towards a reference plant trait ontology for modeling knowledge of plant traits and phenotypes. In: 4th International Conference on Knowledge Engineering and Ontology Development, KEOD 2012, Barcelona, Spain, 4-7 Oct 2012. Published in: KEOD 2012 - Proceedings of the International Conference on Knowledge Engineering and Ontology Development ISBN 9789898565303.

Probert, William J. M., McDonald-Madden, E., Peyrard, N. and Sabbadin, R. (2012) Computational issues surrounding the dynamic optimisation of management of an ecological food web. In: European Conference on Artificial Intelligence, Montpellier, France, 27-31 Aug 2012. Published in: Proceedings of the European Conference on Artificial Intelligence

Report

Gravel, Genevieve (2012) The use of a pediatric prophylactic vaccine for respiratory syncytial virus in Kenya. KEMRI-Wellcome Trust Research Programme.

Digital Scholarly Resource

Hussain (Hassan), Marwa and Azzazy, Hassan M. (2012) Direct detection of mycobacterium tuberculosis complex using gold nanoparticles. [Online]. (https://www.semanticscholar.org/paper/DIRECT-DETEC...).

Performance

Vicente, Joana G. (2012) Food Unwrapped : Black Rot bacteria is used to replace fat in light mayonnaise [Series 2 Episode 6]. [Performance] Wellesbourne Campus, University of Warwick, Coventry, United Kingdom. 22 October 2012.