Journal Article

(2019) Sharing data from molecular simulations. Journal of Chemical Information and Modeling, 59 (10). pp. 4093-4099. doi:10.1021/acs.jcim.9b00665

Adams, Sally, Pathak, Prachi, Shao, Hongguang, Lok, James B. and Pires-da Silva, André Francisco (2019) Liposome-based transfection enhances RNAi and CRISPR-1 mediated mutagenesis in non-model nematode systems. Scientific Reports, 9 . 483. doi:10.1038/s41598-018-37036-1

Agom, David A., Poole, Helen, Allen, Stuart C. H., Onyeka, Tonia C. and Ominyi, Jude (2019) Understanding the Organization of Hospital-Based Palliative Care in a Nigerian Hospital: An Ethnographic Study. Indian Journal of Palliative Care .

Agoti, Charles N., Phan, My V. T., Munywoki, Patrick K., Githinji, George, Medley, Graham, Cane, Patricia A., Kellam, Paul, Cotton, Matthew and Nokes, D. James (2019) Genomic analysis of respiratory syncytial virus infections in households and utility in inferring who infects the infant. Scientific Reports . 10076. doi:10.1038/s41598-019-46509-w

Ailloud, Florent, Didelot, Xavier, Woltemate, Sabrina, Pfaffinger, Gudrun, Overmann, Jörg, Bader, Ruth Christiane, Schulz, Christian, Malfertheiner, Peter and Suerbaum, Sebastian (2019) Within-host evolution of Helicobacter pylori shaped by niche-specific adaptation, intragastric migrations and selective sweeps. Nature Communications, 10 (1). 2273 . doi:10.1038/s41467-019-10050-1

Alberti, Fabrizio and Corre, Christophe (2019) Editing streptomycete genomes in the CRISPR/Cas9 age. Natural Product Reports, 36 (9). pp. 1237-1248. doi:10.1039/c8np00081f

Alberti, Fabrizio, Leng, Daniel J., Wilkening, Ina, Song, Lijiang, Tosin, Manuela and Corre, Christophe (2019) Triggering the expression of a silent gene cluster from genetically intractable bacteria results in scleric acid discovery. Chemical Science, 10 (2). pp. 453-463. doi:10.1039/C8SC03814G

Allaby, Robin G., Ware, Roselyn and Kistler, Logan (2019) A re-evaluation of the domestication bottleneck from archaeogenomic evidence. Evolutionary Applications, 12 (1). pp. 29-37. doi:10.1111/eva.12680

An, Hong, Qi, Xinshuai, Gaynor, Michelle L., Hao, Yue, Gebken, Sarah C., Mabry, Makenzie E., McAlvay, Alex C., Teakle, Graham R., Conant, Gavin C., Barker, Michael S., Fu, Tingdong, Yi, Bin and Pires, J. Chris (2019) Transcriptome and organellar sequencing highlights the complex origin and diversification of allotetraploid Brassica napus. Nature Communications, 10 (1). 2878. doi:10.1038/s41467-019-10757-1

Anonye, Blessing O., Hassall, Jack, Patient, Jamie, Detamornrat, Usanee, Aladdad, Afnan M., Schüller, Stephanie, Rose, Felicity R. A. J. and Unnikrishnan, Meera (2019) Probing Clostridium difficile infection in complex human gut cellular models. Frontiers in Microbiology, 10 . 879. doi:10.3389/fmicb.2019.00879

Ar Rashid, Md. Harun, Cheng, Wei and Thomas, Brian (2019) Temporal and spatial expression of Arabidopsis gene homologs control daylength adaptation and bulb formation in onion (Allium cepa L.). Scientific Reports, 9 . 14629 . doi:10.1038/s41598-019-51262-1

Armitage, Andrew D., Taylor, Andrew, Hulin, Michelle T., Jackson, Alison C., Harrison, Richard J., Clarkson, John P. and Rokas, Antonis (2019) Draft genome sequence of an onion basal rot isolate of fusarium proliferatum. Microbiology Resource Announcements, 8 (1). e01385. doi:10.1128/MRA.01385-18

Arzt, Jonathan, Branan, Matthew A., Delgado, Amy H., Yadav, Shankar, Moreno-Torres, Karla I., Tildesley, Michael J. and Stenfeldt, Carolina (2019) Quantitative impacts of incubation phase transmission of foot-and-mouth disease virus. Scientific Reports, 9 (1). 2707. doi:10.1038/s41598-019-39029-0

Asare‐Bediako, Elvis, Jones, Julie E. , Hambidge, Angela, Stevenson, Mark, Mead, Andrew, Jenner, Carol E. and Walsh, John A. (2019) The incidence of Turnip yellows virus in oilseed rape crops (Brassica napus L.) in three different regions of England over three consecutive growing seasons and the relationship with the abundance of flying Myzus persicae. Annals of Applied Biology . doi:10.1111/aab.12565 (In Press)

(2019) Synthesis and testing of novel alternative oxidase (AOX) inhibitors with antifungal activity against Moniliophthora perniciosa (Stahel), the causal agent of witches' broom disease of cocoa, and other phytopathogens. Pest Management Science , 75 (5). pp. 1295-1303. doi:10.1002/ps.5243

Bartho, Joseph D., Demitri, Nicola, Bellini, Dom, Flachowsky, Henryk, Peil, Andreas, Walsh, Martin A. and Benini, Stefano (2019) The structure of Erwinia amylovora AvrRpt2 provides insight into protein maturation and induced resistance to fire blight by Malus × robusta 5. Journal of Structural Biology, 206 (2). pp. 233-242. doi:10.1016/j.jsb.2019.03.010

Bassel, George (2019) Multicellular systems biology : quantifying cellular patterning and function in plant organs using network science. Molecular Plant, 12 (6). pp. 731-742. doi:10.1016/j.molp.2019.02.004

Beal, Dave M., Bastow, Emma L., Staniforth, Gemma L., von der Haar, Tobias, Freedman, Robert B. and Tuite, Mick F. (2019) Quantitative analyses of the yeast oxidative protein folding pathway in vitro and in vivo. Antioxidants & Redox Signaling . doi:10.1089/ars.2018.7615

Beechler, B. R., Boersma, Kate S., Buss, Peter E., Coon, Courtney A. C., Gorsich, Erin E., Henrichs, Brian S., Siepielski, Adam M., Spaan, Johannie M., Spaan, Robert S., Ezenwa, Vanessa O. and Jolles, Anna E. (2019) Bovine tuberculosis disturbs parasite functional trait composition in African buffalo. Proceedings of the National Academy of Sciences of the United States of America, 116 (29). pp. 14645-14650. doi:10.1073/pnas.1903674116 (In Press)

Beentjes, C.H.L., Taylor-King, J.P., Bayani, A., Davis, C.N., Dunster, J.L., Jabbari, S., Mirams, G.R., Jenkinson, C., Kilby, M.D., Hewison, M. and Tamblyn, J.A. (2019) Defining vitamin D status using multi-metabolite mathematical modelling: A pregnancy perspective. The Journal of Steroid Biochemistry and Molecular Biology, 190 . pp. 152-160. doi:10.1016/j.jsbmb.2019.03.024

Bella, P., Moretti, C., Licciardello, G., Strano, C. P., Pulvirenti, A., Alaimo, S., Zaccardelli, M., Branca, F., Buonaurio, R., Vicente, J. G. and Catara, V. (2019) Multilocus sequence typing analysis of Italian Xanthomonas campestris pv. campestris strains suggests the evolution of local endemic populations of the pathogen and does not correlate with race distribution. Plant Pathology, 68 (2). pp. 278-287. doi:10.1111/ppa.12946

Bellini, Dom, Koekemoer, Lizbé, Newman, Hector and Dowson, Christopher G. (2019) Novel and improved crystal structures of H. influenzae, E. coli and P. aeruginosa penicillin-binding protein 3 (PBP3) and N. gonorrhoeae PBP2 : toward a better understanding of β-Lactam target-mediated resistance. Journal of Molecular Biology, 431 (18). pp. 3501-3519. doi:10.1016/j.jmb.2019.07.010

Benton, Matthew Alan, Frey, Nadine, Nunes da Fonseca, Rodrigo, von Levetzow, Cornelia, Stappert, Dominik, Hakeemi, Muhammad Salim, Conrads, Kai H., Pechmann, Matthias, Panfilio, Kristen A., Lynch, Jeremy A. and Roth, Siegfried (2019) Fog signaling has diverse roles in epithelial morphogenesis in insects. eLife, 8 . e47346. doi:10.7554/elife.47346

Bianchet, Chantal, Wong, Aloysius, Quaglia, Mara, Alqurashi, May, Gehring, Chris, Ntoukakis, Vardis and Pasqualini, Stefania (2019) An Arabidopsis thaliana leucine-rich repeat protein harbors an adenylyl cyclase catalytic center and affects responses to pathogens. Journal of Plant Physiology, 232 . pp. 12-22. doi:10.1016/j.jplph.2018.10.025

Boardman, Felicity K., Hale, Rachel, Gohel, Raksha and Young, Philip J. (2019) Prevention of lives affected by haemophilia : a mixed methods study of the views of adults with haemophilia and their families towards genetic screening. Molecular Genetics and Genomic Medicine . e618. doi:10.1002/mgg3.618 (In Press)

Bolla, Jani Reddy, Corey, Robin A., Sahin, Cagla, Gault, Joseph, Hummer, Alissa, Hopper, Jonathan T. S., Lane, David P., Drew, David, Allison, Timothy M., Stansfeld, Phillip J., Robinson, Carol V. and Landreh, Michael (2019) A mass spectrometry-based approach to distinguish annular and specific lipid binding to membrane proteins. Angewandte Chemie International Edition . doi:10.1002/anie.201914411 (In Press)

Boltze, Johannes, Ferrara, Fabienne, Hainsworth, Atticus H., Bridges, Leslie R., Zille, Marietta, Lobsien, Donald, Barthel, Henryk, McLeod, Damian D., Gräßer, Felix, Pietsch, Sören, Schatzl, Ann-Kathrin, Dreyer, Antje Y. and Nitzsche, Björn (2019) Lesional and perilesional tissue characterization by automated image processing in a novel gyrencephalic animal model of peracute intracerebral hemorrhage. Journal of Cerebral Blood Flow & Metabolism, 39 (12). pp. 2521-2535. doi:10.1177/0271678X18802119

(2019) Stem cells as an emerging paradigm in stroke 4 : advancing and accelerating preclinical research. Stroke, 50 (11). pp. 3299-3306. doi:10.1161/STROKEAHA.119.025436

Borsetto, Chiara, Amos, Gregory C. A., da Rocha, Ulisses Nunes, Mitchell, Alex L., Finn, Robert D., Laidi, Rabah Forar, Vallin, Carlos, Pearce, David A., Newsham, Kevin K. and Wellington, E. M. H. (2019) Microbial community drivers of PK/NRP gene diversity in selected global soils. Microbiome, 7 (1). 78. doi:10.1186/s40168-019-0692-8

Breeze, Emily (2019) 97 Shades of Gray: Genetic Interactions of the Gray Mold, Botrytis cinerea, with Wild and Domesticated Tomato. The Plant Cell, 31 (2). pp. 280-281. doi:10.1105/tpc.19.00030

Breeze, Emily (2019) Master MYCs: MYC2, the Jasmonate Signaling “Master Switch”. The Plant Cell, 31 (1). pp. 9-10. doi:10.1105/tpc.19.00004

Brockhurst, Michael A., Harrison, Freya, Veening, Jan-Willem , Harrison, Ellie , Blackwell, Grace , Iqbal , Zamin and Maclean , Craig (2019) Assessing evolutionary risks of resistance for new antimicrobial therapies. Nature Ecology and Evolution, 3 . pp. 515-517. doi:10.1038/s41559-019-0854-x

Buckingham-Jeffery, Elizabeth, Hill, Edward M., Datta, Samik, Dilger, Erin and Courtenay, Orin (2019) Spatio-temporal modelling of Leishmania infantum infection among domestic dogs : a simulation study and sensitivity analysis applied to rural Brazil. Parasites & Vectors, 12 (1). 215. doi:10.1186/s13071-019-3430-y

(2019) The structural basis of lipid scrambling and inactivation in the endoplasmic reticulum scramblase TMEM16K. Nature Communications, 10 (1). 3956 . doi:10.1038/s41467-019-11753-1

Caffalette, Christopher A., Corey, Robin A., Sansom, Mark S. P., Stansfeld, Phillip J. and Zimmer, Jochen (2019) A lipid gating mechanism for the channel-forming O antigen ABC transporter. Nature Communications, 10 (1). 824. doi:10.1038/s41467-019-08646-8

Cain, Ricky, Salimraj, Ramya, Punekar, Avinash S., Bellini, Dom, Fishwick, Colin W. G., Czaplewski, Lloyd, Scott, David J., Harris, Gemma, Dowson, Christopher G., Lloyd, Adrian J. and Roper, David I. (2019) Structure-guided enhancement of selectivity of chemical probe inhibitors targeting bacterial seryl-tRNA synthetase. Journal of Medicinal Chemistry, 62 (21). pp. 9703-9717. doi:10.1021/acs.jmedchem.9b01131

Cama, Jehangir, Henney, Abby Mae and Winterhalter, Mathias (2019) Breaching the barrier : quantifying antibiotic permeability across gram-negative bacterial membranes. Journal of Molecular Biology . doi:10.1016/j.jmb.2019.03.031

Castillo-Lorenzo, E., Finch-Savage, William E., Seal, C. E. and Pritchard, H. W. (2019) Adaptive significance of functional germination traits in crop wild relatives of Brassica. Agricultural and Forest Meteorology, 264 . pp. 343-350. doi:10.1016/j.agrformet.2018.10.014

Castillo-Lorenzo, E., Pritchard, Hugh W., Finch-Savage, William E. and Seal, Charlotte E. (2019) Comparison of seed and seedling functional traits in native Helianthus species and the crop H. annuus ( sunflower). Plant Biology, 21 (3). pp. 533-543. doi:10.1111/plb.12928

Cetecioglu, Zeynep, Dolfing, Jan, Taylor, Jessica, Purdy, Kevin J. and Eyice, Özge (2019) COD/sulfate ratio does not affect the methane yield and microbial diversity in anaerobic digesters. Water Research, 155 . pp. 444-454. doi:10.1016/j.watres.2019.02.038

Cevik, Volkan, Boutrot, Freddy, Apel, Wiebke, Robert-Seilaniantz, Alexandre, Furzer, Oliver J., Redkar, Amey, Castel, Baptiste, Kover, Paula, Prince, David C., Holub, E. B. and Jones, Jonathan D. G. (2019) Transgressive segregation reveals mechanisms of Arabidopsis immunity to Brassica-infecting races of white rust (Albugo candida). Proceedings of the National Academy of Sciences, 116 (7). pp. 2767-2773. doi:10.1073/pnas.1812911116

Chaiban, Celia, Biscio, Christophe, Thanapongtharm, Weerapong, Tildesley, Michael J., Xiao, Xiangming, Robinson, Timothy P., Vanwambeke, Sophie O. and Gilbert, Marius (2019) Point pattern simulation modelling of extensive and intensive chicken farming in Thailand : accounting for clustering and landscape characteristics. Agricultural Systems, 173 . pp. 335-344. doi:10.1016/j.agsy.2019.03.004

Chandler, Dave, Cooper, Emily and Prince, Gillian (2019) Are there risks to wild European bumble bees from using commercial stocks of domesticated Bombus terrestris for crop pollination? Journal of Apicultural Research . pp. 1-17. doi:10.1080/00218839.2019.1637238

Chattaway, Marie Anne, Chandra, Nastassya, Painset, Anaïs, Shah, Victoria, Lamb, Peter, Acheampong, Elsie, Lo, Janice, Patel, Bharat, Larkin, Lesley, Sergeant, Martin J., Cormican, Martin, Litrup, Eva and Crook, Paul (2019) Genomic approaches used to investigate an atypical outbreak of Salmonella Adjame. Microbial Genomics, 5 (1). doi:10.1099/mgen.0.000248

Chen, Jing, Wade, Matthew J., Dolfing, Jan and Soyer, Orkun S. (2019) Increasing sulfate levels show a differential impact on synthetic communities comprising different methanogens and a sulfate reducer. Journal of The Royal Society Interface, 16 (154). 20190129. doi:10.1098/rsif.2019.0129

Chen, Xu (Researcher in statistics), Formisano, Elia, Blokland, Gabriëlla A. M., Strike, Lachlan T., McMahon, Katie L., Zubicaray, Greig I., Thompson, Paul M., Wright, Margaret J., Winkler, Anderson M., Ge, Tian and Nichols, Thomas E. (2019) Accelerated estimation and permutation inference for ACE modeling. Human Brain Mapping . doi:10.1002/hbm.24611

Chen, Yin, Jones, Helen J., Kröber, Eileen, Stephenson, Jason, Mausz, Michaela A., Jameson, Eleanor, Millard, Andrew D. and Purdy, Kevin J. (2019) A new family of uncultivated bacteria involved in methanogenesis from the ubiquitous osmolyte glycine betaine in coastal saltmarsh sediments. Microbiome, 7 . 120. doi:10.1186/s40168-019-0732-4 (In Press)

Chen, Yin and Schäfer, Hendrik (2019) Towards a systematic understanding of structure–function relationship of dimethylsulfoniopropionate‐catabolizing enzymes. Molecular Microbiology, 111 (6). pp. 1399-1403. doi:10.1111/mmi.14230 (In Press)

Clifton, Rachel, Giebel, Katharina, Liu, Nicola, Purdy, Kevin J. and Green, Laura E. (2019) Sites of persistence of Fusobacterium necrophorum and Dichelobacter nodosus: a paradigm shift in understanding the epidemiology of footrot in sheep. Scientific Reports, 9 (1). 14429. doi:10.1038/s41598-019-50822-9

Clifton, Rachel, Reeves, Michelle, Kaler, Jasmeet and Green, Laura E. (2019) Best practice versus farm practice : perspectives of lecturers and students at agricultural colleges in England on management of lameness in sheep. Journal of Rural Studies . doi:10.1016/j.jrurstud.2019.11.014 (In Press)

Collyer, Benjamin S., Turner, Hugo C., Hollingsworth, T. Déirdre and Keeling, Matthew James (2019) Vaccination or mass drug administration against schistosomiasis : a hypothetical cost-effectiveness modelling comparison. Parasites & Vectors, 12 (1). 499. doi:10.1186/s13071-019-3749-4

Cook, Jonathan P., de Wolf, Elizabeth and Dale, Nicholas (2019) Cx26 keratitis ichthyosis deafness syndrome mutations trigger alternative splicing of Cx26 to prevent expression and cause toxicity in vitro. Royal Society Open Science , 6 (8). 191128. doi:10.1098/rsos.191128

Corey, Robin A., Stansfeld, Phillip J. and Sansom, Mark S. P. (2019) The energetics of protein-lipid interactions as viewed by molecular simulations. Biochemical Society Transactions . (In Press)

Corey, Robin A., Vickery, Owen N., Sansom, Mark S. P. and Stansfeld, Phillip J. (2019) Insights into membrane protein–lipid interactions from free energy calculations. Journal of Chemical Theory and Computation, 15 (10). pp. 5727-5736. doi:10.1021/acs.jctc.9b00548

Courtenay, Orin, Bazmani, Ahad, Parvizi, Parviz, Ready, Paul D. and Cameron, Mary M. (2019) Insecticide–impregnated dog collars reduce infantile clinical visceral leishmaniasis under operational conditions in NW Iran : a community–wide cluster randomised trial. PLoS Neglected Tropical Diseases, 13 (3). e0007193. doi:10.1371/journal.pntd.0007193

Courtenay, Orin, Dilger, Erin, Calvo-Bado, Leo A., Kravar-Garde, Lidija, Carter, Vicky, Bell, Melissa J., Alves, Graziella B. , Gonçalves, Raquel, Makhdoomi, Muhammad M., González, Mikel A., Nunes, Caris M., Bray, Daniel P., Brazil, Reginaldo P. and Hamilton, James G. C. (2019) Sand fly synthetic sex-aggregation pheromone co-located with insecticide reduces the incidence of infection in the canine reservoir of visceral leishmaniasis : a stratified cluster randomised trial. PLoS Neglected Tropical Diseases, 13 (10). e0007767. doi:10.1371/journal.pntd.0007767

Criscuolo, Alexis, Issenhuth-Jeanjean, Sylvie, Didelot, Xavier, Thorell, Kaisa, Hale, James, Parkhill, Julian, Thomson, Nicholas R., Weill, François-Xavier, Falush, Daniel and Brisse, Sylvain (2019) The speciation and hybridization history of the genus Salmonella. Microbial Genomics, 5 (8). doi:10.1099/mgen.0.000284

Cui, Li‐li, Golubczyk, Dominika, Tolppanen, Anna‐Maija, Boltze, Johannes and Jolkkonen, Jukka (2019) Cell therapy for ischemic stroke : are differences in preclinical and clinical study design responsible for the translational loss of efficacy? Annals of Neurology, 86 (1). pp. 5-16. doi:10.1002/ana.25493

Cummings, Matthew, Peters, Anna D. , Whitehead, George F. S. , Menon, Binuraj R. K., Micklefield, Jason and Webb, Simon J. (2019) Assembling a plug-and-play production line for combinatorial biosynthesis of aromatic polyketides in Escherichia coli. PLoS Biology, 17 (7). e3000347. doi:10.1371/journal.pbio

Córdova-Rivas, Sergio, Fraire-Soto, Ixamail, Mercado-Casas Torres, Andrea, Servín-González, Luis, Granados-López, Angelica, López-Hernández, Yamilé, Reyes-Estrada, Claudia, Gutiérrez-Hernández, Rosalinda, Castañeda-Delgado, Julio, Ramírez-Hernández, Leticia, Varela-Silva, José and López, Jesús (2019) 5p and 3p strands of miR-34 family members have differential effects in cell proliferation, migration, and invasion in cervical cancer cells. International Journal of Molecular Sciences, 20 (3). p. 545. doi:10.3390/ijms20030545

Dale, Nicholas, Tian, Faming, Sagoo, Ravjit, Phillips, Norman, Imray, C. (Chris) and Roffe, Christine (2019) Point-of-care measurements reveal release of purines into venous blood of stroke patients. Purinergic Signalling . doi:10.1007/s11302-019-09647-4 (In Press)

Davies, Laura R., Hull, Richard, Moss, Stephen and Neve, Paul (2019) The first cases of evolving glyphosate resistance in UK poverty brome (Bromus sterilis) populations. Weed Science, 67 (1). pp. 41-47. doi:10.1017/wsc.2018.61

Davis, Christopher N., Rock, Kat S., Mwamba Miaka, Erick and Keeling, Matthew James (2019) Village-scale persistence and elimination of gambiense human African trypanosomiasis. PLOS Neglected Tropical Diseases, 13 (10). e0007838. doi:10.1371/journal.pntd.0007838

Demurtas, Olivia Costantina, de Brito Francisco, Rita, Diretto, Gianfranco, Ferrante, Paola, Frusciante, Sarah, Pietrella, Marco, Aprea, Giuseppe, Borghi, Lorenzo, Feeney, Mistianne, Frigerio, Lorenzo, Coricello, Adriana, Costa, Giosuè, Alcaro, Stefano, Martinoia, Enrico and Giuliano, Giovanni (2019) ABCC transporters mediate the vacuolar accumulation of crocins in saffron stigmas. Plant Cell, 31 (11). pp. 2789-2804. doi:10.1105/tpc.19.00193

Didelot, Xavier and Pouwels, Koen B. (2019) Machine-learning-assisted selection of antibiotic prescription. Nature Medicine, 25 (7). pp. 1033-1034. doi:10.1038/s41591-019-0517-0

Dingle, Kate E., Didelot, Xavier, Quan, T. Phuong, Eyre, David W., Stoesser, Nicole, Marwick, Charis A., Coia, John, Brown, Derek, Buchanan, Sarah, Ijaz, Umer Z., Goswami, Cosmika, Douce, Gill, Fawley, Warren N., Wilcox, Mark H., Peto, Timothy E. A., Walker, A. Sarah, Crook, Derrick W. and Keim, Paul (2019) A role for tetracycline selection in recent evolution of agriculture-associated clostridium difficile PCR ribotype 078. mBio, 10 (2). pp. 1-19. e02790. doi:10.1128/mBio.02790-18

Dorp, Lucy van, Wang, Qi, Shaw, Liam P., Acman, Mislav, Brynildsrud, Ola B., Eldholm, Vegard, Wang, Ruobing, Gao, Hua, Yin, Yuyao, Chen, Hongbin, Ding, Chuling, Farrer, Rhys A., Didelot, Xavier, Balloux, Francois and Wang, Hui (2019) Rapid phenotypic evolution in multidrug-resistant Klebsiella pneumoniae hospital outbreak strains. Microbial Genomics . doi:10.1099/mgen.0.000263 (In Press)

Dospinescu, Valentin-Mihai, Nijjar, Sarbjit, Spanos, Fokion, Cook, Jonathan P., de Wolf, Elizabeth, Biscotti, Maria Assunta, Gerdol, Marco and Dale, Nicholas (2019) Structural determinants of CO2-sensitivity in the β connexin family suggested by evolutionary analysis. Communications Biology, 2 (1). 331 . doi:10.1038/s42003-019-0576-2

Drenichev, Mikhail S., Bennett, Mark, Novikov, Roman A., Mansfield, John, Smirnoff, Nick, Grant, Murray R. and Mikhailov, Sergey N. (2019) A role for 3′-O-β-D-ribofuranosyladenosine in altering plant immunity. Phytochemistry Letters, 157 . pp. 128-134. doi:10.1016/j.phytochem.2018.10.016

Dryer, Nigel P., Shahrazaie, Vahid and Hebenstreit, Daniel (2019) LiBiNorm : an htseq-count analogue with improved normalisation of Smart-seq2 data and library preparation diagnostics. PeerJ, 7 . e6222. doi:10.7717/peerj.6222

Duraffourd, Celine, Huckstepp, Robert T. R., Braren, Ingke, Fernandes, Cathy, Brock, Olivier, Delogu, Alessio, Prysyazhna, Oleksandra, Burgoyne, Joseph and Eaton, Philip (2019) PKG1α oxidation negatively regulates food seeking behaviour and reward. Redox Biology, 21 . 101077. doi:10.1016/j.redox.2018.101077

Duran-Nebreda, Salva and Bassel, George (2019) Plant behaviour in response to the environment : information processing in the solid state. Philosophical Transactions of the Royal Society B: Biological Sciences, 374 (1774). 20180370. doi:10.1098/rstb.2018.0370

Dyson, Louise, Mooring, Eric Q., Holmes, Alexander, Tildesley, Michael J. and Marks, Michael (2019) Insights from quantitative and mathematical modelling on the proposed 2030 goals for yaws. Gates Open Research, 3 . 1576. doi:doi:10.12688/gatesopenres.13078.1 (Submitted)

Engesser, Sabrina, Holub, Jennifer L., O’Neill, Louis G., Russell, Andrew F. and Townsend, Simon W. (2019) Chestnut-crowned babbler calls are composed of meaningless shared building blocks. Proceedings of the National Academy of Sciences . doi:10.1073/pnas.1819513116 (In Press)

Erni-Cassola, Gabriel, Zadjelovic, Vinko, Gibson, Matthew I. and Christie-Oleza, Joseph Alexander (2019) Distribution of plastic polymer types in the marine environment ; a meta-analysis. Journal of Hazardous Materials, 369 . pp. 691-698. doi:10.1016/j.jhazmat.2019.02.067

Eyre, David W., Didelot, Xavier, Buckley, Anthony M., Freeman, Jane, Moura, Ines B., Crook, Derrick W., Peto, Tim E.A., Walker, A. Sarah, Wilcox, Mark H. and Dingle, Kate E. (2019) Clostridium difficile trehalose metabolism variants are common and not associated with adverse patient outcomes when variably present in the same lineage. EBioMedicine, 43 . pp. 347-355. doi:10.1016/j.ebiom.2019.04.038

Feng, Song and Soyer, Orkun S. (2019) In silico evolution of signaling networks using rule-based models : bistable response dynamics. Methods in molecular biology, 1945 . pp. 315-339. doi:10.1007/978-1-4939-9102-0_15

Fenn, Jonathan S., Nepravishta, Ridvan, Guy, Collette S., Harrison, James, Angulo, Jesus, Cameron, Alexander and Fullam, Elizabeth (2019) Structural basis of glycerophosphodiester recognition by the mycobacterium tuberculosis substrate-binding protein UgpB. ACS Chemical Biology, 14 (9). pp. 1879-1887. doi:10.1021/acschembio.9b00204

Ferguson, Eamonn, Quigley, Erin, Powell, Georgia, Stewart, Liam, Harrison, Freya and Tallentire, Holly (2019) To help or punish in the face of unfairness : men and women prefer mutually-beneficial strategies over punishment in a sexual selection context. Royal Society Open Science , 6 (9). 181441. doi:10.1098/rsos.181441

Fernie, Alisdair R. and Gutierrez-Marcos, José F. (2019) From genome to phenome: genome-wide association studies and other approaches that bridge the genotype to phenotype gap. The Plant Journal, 97 (1). pp. 5-7. doi:10.1111/tpj.14219

Ferrari, Matthew (Matt), Whittles, Lilith K., White, Peter J. and Didelot, Xavier (2019) A dynamic power-law sexual network model of gonorrhoea outbreaks. PLoS Computational Biology, 15 (3). e1006748. doi:10.1371/journal.pcbi.1006748

Firczuk, Helena, Teahan, James, Mendes, Pedro and McCarthy, John E. G. (2019) Multi-site rate control analysis identifies ribosomal scanning as the sole high-capacity/low-flux-control step in mRNA translation. FEBS Journal . doi:10.1111/febs.15059 (In Press)

Footitt, Steven, Clewes, Rachel, Feeney, Mistianne, Finch-Savage, William E. and Frigerio, Lorenzo (2019) Aquaporins influence seed dormancy and germination in response to stress. Plant, Cell & Environment, 42 (8). pp. 2325-2339. doi:10.1111/pce.13561 (In Press)

Footitt, Steven, Walley, Peter G., Lynn, James R., Hambidge, A. J. (Angela J.), Penfield, Steven and Finch-Savage, William E. (2019) Trait analysis reveals DOG1 determines initial depth of seed dormancy, but not changes during dormancy cycling that result in seedling emergence timing. New Phytologist . doi:10.1111/nph.16081 (In Press)

Frenguelli, Bruno G. (2019) The purine salvage pathway and the restoration of cerebral ATP : implications for brain slice physiology and brain injury. Neurochemical Research, 44 (3). pp. 661-675. doi:10.1007/s11064-017-2386-6

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Harrison, Freya and Jones, Chris (2019) Could medieval medicine help the fight against antimicrobial resistance? In: Jones, Chris and Kostick, Conor and Oschema, Klaus, (eds.) Making the Medieval Relevant: How Medieval Studies Contribute to Improving our Understanding of the Present. Berlin, Boston: De Gruyter, pp. 113-134. ISBN 9783110546316

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Mausz , Michaela A. and Chen, Yin (2019) Microbiology and ecology of methylated amine metabolism in marine ecosystems. In: Chistoserdova, Ludmila, (ed.) Methylotrophs and Methylotroph Communities. Caister Academic Press. ISBN 9781912530045

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Dougan, Gordon, Dowson, Chris and Overington, John (2019) Meeting the discovery challenge of drug-resistant infections : progress and focusing resources. In: Next Generation Antibiotic Discovery Symposium, Jan 2018. Published in: Drug Discovery Today, 24 (2). pp. 452-461. ISSN 1359-6446. doi:10.1016/j.drudis.2018.11.015 (In Press)

Working or Discussion Paper

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Journal Item

Allaby, Robin G. (2019) Clonal crops show structural variation role in domestication. Nature Plants, 5 (9). pp. 915-916. doi:10.1038/s41477-019-0515-8

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Dataset

Mitchell, Daniel A., Fayter, Alice, Deller, Robert C., Hasan, Muhammad, Gutierrez-Marcos, José F. and Gibson, Matthew I. (2019) Data for Ice-recrystallization inhibiting polymers protect proteins against freeze-stress and enable glycerol-free cryostorage. [Dataset]