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Number of items: 29.
Journal Article
Alam, Mohammad Tauqee, Merlo, Maria Elena, Takano, Eriko and Breitling, Rainer (2010) Genome-based phylogenetic analysis of Streptomyces and its relatives. Molecular Phylogenetics and Evolution, 54 (3). pp. 763-72. doi:doi: 10.1016/j.ympev.2009.11.019 ISSN 1055-7903.
Cariss, S. J. L., Constantinidou, Chrystala, Patel, M. D., Takebayashi, Y., Hobman, J. L., Penn, C. W. and Avison, M. B. (2010) YieJ (CbrC) mediates CreBC-dependent colicin E2 tolerance in Escherichia coli. Journal of Bacteriology, Volume 192 (Number 13). pp. 3329-3336. doi:10.1128/JB.01352-09 ISSN 0021-9193.
(2010) Complete genome sequence and comparative metabolic profiling of the prototypical enteroaggregative escherichia coli strain 042. PLoS One, 5 (1). e8801. doi:10.1371/journal.pone.0008801 ISSN 1932-6203.
Clokie, Martha R. J., Millard, Andrew D. and Mann, Nicholas H. (2010) T4 genes in the marine ecosystem: studies of the T4-like cyanophages and their role in marine ecology. Virology Journal, Volume 7 . Article number 291. doi:10.1186/1743-422X-7-291 ISSN 1743-422X.
(2010) A commensal gone bad : complete genome sequence of the prototypical enterotoxigenic escherichia coli strain H10407. Journal of Bacteriology, Volume 192 (Number 21). pp. 5822-5831. doi:10.1128/JB.00710-10 ISSN 0021-9193.
Dowling, Andrea J., Wilkinson, Paul A., Holden, Matthew T. G., Quail, Michael A., Bentley, Stephen D., Reger, Julia, Waterfield, Nicholas R., Titball, Richard W. and ffrench-Constant, Richard H. (2010) Genome-wide analysis reveals loci encoding anti-macrophage factors in the human pathogen burkholderia pseudomallei K96243. PLoS One, Volume 5 (Number 12). Article number e15693. doi:10.1371/journal.pone.0015693 ISSN 1932-6203.
Islam, Md. Shahidul, Bingle, Lewis E. H., Pallen, Mark J. and Busby, Stephen J. W. (2010) Organization of the LEE1 operon regulatory region of enterohaemorrhagic Escherichia coli O157:H7 and activation by GrlA. Molecular Microbiology, 79 (2). pp. 468-483. doi:10.1111/j.1365-2958.2010.07460.x ISSN 0950-382X.
Jia, Ying, Shan, Jinyu, Millard, Andrew D., Clokie, Martha R. J. and Mann, Nicholas H. (2010) Light-dependent adsorption of photosynthetic cyanophages to Synechococcus sp. WH7803. FEMS Microbiology Letters, 310 (2). pp. 120-126. doi:10.1111/j.1574-6968.2010.02054.x ISSN 0378-1097.
Jones, Robert T., Sanchez-Contreras, Maria, Vlisidou, Isabella, Amos, Matthew R., Yang, Guowei, Munoz-Berbel, Xavier, Upadhyay, Abhishek, Potter, Ursula J., Joyce, Susan A., Ciche, Todd A., Jenkins, A. Toby A., Bagby, Stefan, Ffrench-Constant, Richard H. and Waterfield, Nicholas R. (2010) Photorhabdus adhesion modification protein (Pam) binds extracellular polysaccharide and alters bacterial attachment. BMC Microbiology, Volume 10 (Number 1). p. 141. doi:10.1186/1471-2180-10-141 ISSN 1471-2180.
Latifi-Navid, Saeid, Ghorashi, Seyed Ali, Siavoshi, Farideh, Linz, Bodo, Massarrat, Sadegh, Khegay, Tanya, Salmanian, Ali-Hatef, Shayesteh, Ali Akbar, Masoodi, Mohsen, Ghanadi, Koroush, Ganji, Azita, Suerbaum, Sebastian, Achtman, Mark, Malekzadeh, Reza and Falush, Daniel (2010) Ethnic and geographic differentiation of helicobacter pylori within Iran. PLoS One, Volume 5 (Number 3). Article number e9645. doi:10.1371/journal.pone.0009645 ISSN 1932-6203.
(2010) The genome of a pathogenic rhodococcus : cooptive virulence underpinned by key gene acquisitions. PLoS Genetics, Volume 6 (Number 9). Article number e1001145. doi:10.1371/journal.pgen.1001145 ISSN 1553-7390.
Lewis, T., Loman, Nicholas J., Bingle, L., Jumaa, P., Weinstock, G. M., Mortiboy, D. and Pallen, Mark J. (2010) High-throughput whole-genome sequencing to dissect the epidemiology of Acinetobacter baumannii isolates from a hospital outbreak. Journal of Hospital Infection, Volume 75 (Number 1). pp. 37-41. doi:10.1016/j.jhin.2010.01.012 ISSN 0195-6701.
Loman, Nicholas J. and Pallen, Mark J. (2010) EntrezAJAX : direct web browser access to the Entrez Programming Utilities. Source Code for Biology and Medicine, volume 5 (Number 1). Article number 6. doi:10.1186/1751-0473-5-6 ISSN 1751-0473.
Malik, Harmit S., Olbermann, Patrick, Josenhans, Christine, Moodley, Yoshan, Uhr, Markus, Stamer, Christiana, Vauterin, Marc, Suerbaum, Sebastian, Achtman, Mark and Linz, Bodo (2010) A global overview of the genetic and functional diversity in the helicobacter pylori cag pathogenicity island. PLoS Genetics, Volume 6 (Number 8). Article Number e1001069. doi:10.1371/journal.pgen.1001069 ISSN 1553-7390.
Medema, Marnix H, Alam, Mohammad T., Heijne, Wilbert H M, Van den Berg, Marco, MΓΌller, Ulrike, Trefzer, Axel, Bovenberg, Roel A L, Breitling, Rainer and Takano, Eriko (2010) Genome-wide gene expression changes in an industrial clavulanic acid overproduction strain of Streptomyces clavuligerus. Microbial Biotechnology, 4 (2). pp. 300-5. doi:10.1111/j.1751-7915.2010.00226.x ISSN 1751-7907.
Medema, Marnix H, Trefzer, Axel, Kovalchuk, Andriy, van den Berg, Marco, MΓΌller, Ulrike, Heijne, Wilbert, Wu, Liang, Alam, Mohammad T., Ronning, Catherine M, Nierman, William C, Bovenberg, Roel A L, Breitling, Rainer and Takano, Eriko (2010) The sequence of a 1.8-mb bacterial linear plasmid reveals a rich evolutionary reservoir of secondary metabolic pathways. Genome Biology and Evolution, 2 . pp. 212-24. doi:doi: 10.1093/gbe/evq013 ISSN 1759-6653.
(2010) Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity. Nature Genetics, 42 (12). pp. 1140-1143. doi:10.1038/ng.705 ISSN 1061-4036.
Pallen, Mark J. (2010) FP1.1 High-throughput sequencing as a tool in the discovery, diagnosis and epidemiology of nosocomial pathogens. Journal of Hospital Infection, 76 . S1. doi:10.1016/S0195-6701(10)00376-2 ISSN 0195-6701.
Pallen, Mark J., Loman, Nicholas J. and Penn, Charles W. (2010) High-throughput sequencing and clinical microbiology : progress, opportunities and challenges. Current Opinion in Microbiology, Volume 13 (Number 5). pp. 625-631. doi:10.1016/j.mib.2010.08.003 ISSN 1369-5274.
Peat, Scott M., ffrench-Constant, Richard H., Waterfield, Nicholas R., MarokhΓ‘zi, Judit, Fodor, Andras and Adams, Byron J. (2010) A robust phylogenetic framework for the bacterial genus Photorhabdus and its use in studying the evolution and maintenance of bioluminescence : a case for 16S, gyrB, and glnA. Molecular Phylogenetics and Evolution, Volume 57 (Number 2). pp. 728-740. doi:10.1016/j.ympev.2010.08.012 ISSN 1055-7903.
Robinson, Esther R., Juhas, Mario, Hood, Derek W. and Crook, Derrick (2010) Construction of a novel shuttle vector for use in Haemophilus influenzae and H. parainfluenzae. Journal of Microbiological Methods, 83 (3). pp. 330-334. doi:10.1016/j.mimet.2010.09.010 ISSN 0167-7012.
Shaw, Robert K., Berger, Cedric N., Pallen, Mark J., SjΓΆling, Γ sa and Frankel, Gad (2010) Flagella mediate attachment of enterotoxigenic Escherichia coli to fresh salad leaves. Environmental Microbiology Reports, Volume 3 (Number 1). pp. 112-117. doi:10.1111/j.1758-2229.2010.00195.x ISSN 1758-2229.
Shukla, Anshuman, Pallen, Mark J., Anthony, Mark and White, Scott A. (2010) The homodimeric GBS1074 fromStreptococcus agalactiae. Acta Crystallographica Section F Structural Biology and Crystallization Communications, Volume 66 (Number 11). pp. 1421-1425. doi:10.1107/S1744309110036286 ISSN 1744-3091.
Snyder, Lori A. S., Loman, Nicholas J., Linton, James D., Langdon, Rebecca R., Weinstock, George M., Wren, Brendan and Pallen, Mark J. (2010) Simple sequence repeats in Helicobacter canadensis and their role in phase variable expression and C-terminal sequence switching. BMC Genomics, Volume 11 (Number 1). Article number 67. doi:10.1186/1471-2164-11-67 ISSN 1471-2164.
Vlisidou, Isabella, Eleftherianos, Ioannis, Dorus, Steve, Yang, Guowei, ffrench-Constant, Richard H., Reynolds, Stuart E. and Waterfield, Nicholas R. (2010) The KdpD/KdpE two-component system of Photorhabdus asymbiotica promotes bacterial survival within M. sexta hemocytes. Journal of Invertebrate Pathology, Volume 105 (Number 3). pp. 352-362. doi:10.1016/j.jip.2010.09.020 ISSN 0022-2011.
Waterfield, Nicholas R. (2010) Hostβpathogen interactions : proline gives insect pathogens the green light. Current Biology, Volume 20 (Number 1). R13-R15. doi:10.1016/j.cub.2009.11.018 ISSN 0960-9822.
Wilkinson, Paul, Paszkiewicz, Konrad, Moorhouse, Alex, Szubert, Jan M., Beatson, Scott, Gerrard, John, Waterfield, Nicholas R. and Ffrench-Constant, Richard H. (2010) New plasmids and putative virulence factors from the draft genome of an Australian clinical isolate of Photorhabdus asymbiotica. FEMS Microbiology Letters, Volume 309 (Number 2). pp. 136-143. doi:10.1111/j.1574-6968.2010.02030.x ISSN 0378-1097.
Younis, R., Bingle, L. E. H., Rollauer, S., Munera, D., Busby, S. J., Johnson, S., Deane, J. E., Lea, S. M., Frankel, G. and Pallen, Mark J. (2010) SepL resembles an aberrant effector in binding to a class 1 Type III secretion chaperone and carrying an N-Terminal secretion signal. Journal of Bacteriology, Volume 192 (Number 22). pp. 6093-6098. doi:10.1128/JB.00760-10 ISSN 0021-9193.
Journal Item
(2010) Supplementary information to support : 'Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity'. Nature Genetics, 42 (12). pp. 1140-1143. ISSN 1061-4036 doi:10.1038/ng.705