Journal Article

Dacheux, Estelle, Malys, Naglis, Meng, Xiang, Ramachandran, Vinoy, Mendes, Pedro and McCarthy, John E. G. (2017) Translation initiation events on structured eukaryotic mRNAs generate gene expression noise. Nucleic Acids Research, 45 (11). pp. 6981-6992. doi:10.1093/nar/gkx430

Meng, Xiang, Firczuk, Helena, Pietroni, Paola, Westbrook, Richard, Dacheux, Estelle, Mendes, Pedro and McCarthy, John E. G. (2016) Minimum-noise production of translation factor eIF4G maps to a mechanistically determined optimal rate control window for protein synthesis. Nucleic Acids Research, 45 (2). pp. 1015-1025. doi:10.1093/nar/gkw1194

Turner, Matthew S., Platts, James A. and Deeth, Robert J. (2016) Modeling of platinum-aryl interaction with amyloid-β peptide. Journal of Chemical Theory and Computation, 12 (3). pp. 1385-1392. doi:10.1021/acs.jctc.5b01045

Prindle, Arthur, Liu, Jintao, Asally, Munehiro, Ly, San, Garcia-Ojalvo, Jordi and Süel, Gürol M. (2015) Ion channels enable electrical communication in bacterial communities. Nature, 527 . pp. 59-63. doi:10.1038/nature15709

Garcia De Gonzalo, C. V., Denham, Emma, Mars, Ruben A. T., Stülke, J., Donk, W. A. van der and Dijl, Jan Maarten van (2015) The phosphoenolpyruvate : sugar phosphotransferase system is involved in sensitivity to the glucosylated bacteriocin sublancin. Antimicrobial agents and chemotherapy, 59 (11). pp. 6844-6854. doi:10.1128/AAC.01519-15

Liu, Jintao, Prindle, Arthur, Humphries, Jacqueline, Gabalda-Sagarra, Marçal, Asally, Munehiro, Lee, Dong-yeon D., Ly, San, Garcia-Ojalvo, Jordi and Süel, Gürol M. (2015) Metabolic co-dependence gives rise to collective oscillations within biofilms. Nature, 523 (7562). pp. 550-554. doi:10.1038/nature14660

Timofeeva, Yulia and Volynsk, Kirill E. (2015) Calmodulin as a major calcium buffer shaping vesicular release and short-term synaptic plasticity : facilitation through buffer dislocation. Frontiers in Cellular Neuroscience, 9 . pp. 1-13. 239. doi:10.3389/fncel.2015.00239

Girija, Umakhanth Venkatraman, Furze, Christopher M., Gingras, Alexandre R., Yoshizak, Takayuki, Ohanti, Katsuki, Marshall, Jamie E., Wallis, A. Katrine, Schwaeble, Wilhelm J., El-Mezgaeldi, Mohammed, Mitchell, Daniel A., Moody, Peter C. E., Wakamiya, Nobutaka and Wallis, Russell (2015) Molecular basis of sugar recognition by collectin-K1 and the effects of mutations associated with 3MC syndrome. Biomed Central Public Health, Volume 13 . pp. 1-13. 27. doi:10.1186/s12915-015-0136-2

Girija, Umakhanth Venkatraman, Furze, Christopher M., Gingras, Alexandre R., Yoshizaki, Takayuki, Ohtani, Katsuki, Marshall, Jamie E., Wallis, A. Katrine, Schwaeble, Wilhelm J., El-Mezgueldi, Mohammed, Mitchell, Daniel A., Moody, Peter C. E., Wakamiya, Nobutaka and Wallis, Russell (2015) Molecular basis of sugar recognition by collectin-K1 and the effects of mutations associated with 3MC syndrome. BMC biology, 13 (1). pp. 1-13. 27. doi:10.1186/s12915-015-0136-2

Gomes, M. Gabriela M., Lipsitch, Marc, Wargo, Andrew R., Kurath, Gael, Rebelo, Carlota, Medley, Graham and Coutinho, Antonio (2014) A missing dimension in measures of vaccination impacts. PLoS Pathogens, Volume 10 (Number 3). Article number e1003849. doi:10.1371/journal.ppat.1003849

Tang, Shangming, Copsey, Alice, Jordan, Philip W., Blitzblau, Hannah G., Newcombe, Sonya, Chan, Andrew Chi-ho, Newnham, Louise, Li, Zhaobo, Gray, Stephen, Herbert, Alex D., Arumugam, Prakash , Hochwagen, Andreas, Hunter, Neil and Hoffmann, Eva (2013) Smc5/6 coordinates formation and resolution of joint molecules with chromosome morphology to ensure meiotic divisions. PLoS Genetics, Volume 9 (Number 12). Article number e1004071. doi:10.1371/journal.pgen.1004071

(2013) Esperanto for histones : CENP-A, not CenH3, is the centromeric histone H3 variant. Chromosome Research, Volume 21 (Number 2). pp. 101-106. doi:10.1007/s10577-013-9347-y

Ehrt, Sabine, Raju, Ravikiran M., Unnikrishnan, Meera, Rubin, Daniel H. F., Krishnamoorthy, Vidhya, Kandror, Olga, Akopian, Tatos N., Goldberg, Alfred L. and Rubin, Eric J. (2012) Mycobacterium tuberculosis ClpP1 and ClpP2 function together in protein degradation and are required for viability in vitro and during infection. PLoS Pathogens, Volume 8 (Number 2). Article number e1002511. doi:10.1371/journal.ppat.1002511

Holmes, Ian, Harris, Keith and Quince, Christopher (2012) Dirichlet multinomial mixtures : generative models for microbial metagenomics. PLoS One, Volume 7 (Number 2). Article number e30126. doi:10.1371/journal.pone.0030126

Kaverina, Irina and Straube, Anne (2011) Regulation of cell migration by dynamic microtubules. Seminars in Cell & Developmental Biology, Volume 22 (Number 9). pp. 968-974. doi:10.1016/j.semcdb.2011.09.017

Sargaeva, Nadezda P., Lin, Cheng and O’Connor, Peter B. (2011) Differentiating N-terminal aspartic and isoaspartic acid residues in peptides. Analytical Chemistry, Vol.83 (No.17). pp. 6675-6682. doi:10.1021/ac201223d

Arabidopsis Interactome Mapping Consortium (Including:

). (2011) Evidence for network evolution in an Arabidopsis interactome map. Science, Vol.333 (No.6042). pp. 601-607. doi:10.1126/science.1203877

Sargaeva, Nadezda P., Lin, Cheng and O’Connor, Peter B. (2011) Unusual fragmentation of β-Linked peptides by ExD tandem mass spectrometry. Journal of The American Society for Mass Spectrometry, Vol.22 (No.3). pp. 480-491. doi:10.1007/s13361-010-0049-9

Li, Xiaojuan, Huang, Yiqun, O’Connor, Peter B. and Lin, Cheng (2011) Structural heterogeneity of doubly-charged peptide b-Ions. Journal of The American Society for Mass Spectrometry, Vol.22 (No.2). pp. 245-254. doi:10.1007/s13361-010-0036-1

Girija, Umakhanth Venkatraman, Mitchell, Daniel A., Roscher, Silke and Wallis, Russell (2011) Carbohydrate recognition and complement activation by rat ficolin-B. European Journal of Immunology, Volume 41 (Number 1). pp. 214-223. doi:10.1002/eji.201040612

Aizikov, Konstantin, Smith, Donald F., Chargin, David A., Ivanov, Sergei, Lin, Tzu-Yung, Heeren, Ron M. A. and O’Connor, Peter B. (2011) Vacuum compatible sample positioning device for matrix assisted laser desorption∕ionization Fourier transform ion cyclotron resonance mass spectrometry imaging. Review of Scientific Instruments, Vol.82 (No.5). Article: 054102. doi:10.1063/1.3594099

Li, Xiaojuan, Lin, Cheng and O'Connor, Peter B. (2010) Glutamine deamidation : differentiation of glutamic acid and gamma-Glutamic acid in peptides by electron capture dissociation. Analytical Chemistry, Vol.82 (No.9). pp. 3606-3615. doi:10.1021/ac9028467

Li, Xiaojuan, Lin, Cheng, Han, L. (Liang), Costello, Catherine E. and O'Connor, Peter B. (2010) Charge remote fragmentation in electron capture and electron transfer dissociation. Journal of The American Society for Mass Spectrometry, Vol.21 (No.4). pp. 646-656. doi:10.1016/j.jasms.2010.01.001

Tildesley, Michael J., House, Thomas A., Bruhn, Mark C., Curry, Ross J., O'Neil, Maggie, Allpress, Justine L. E., Smith, Gary and Keeling, Matthew James (2010) Impact of spatial clustering on disease transmission and optimal control. Proceedings of the National Academy of Sciences of the United States of America, Vol.107 (No.3). pp. 1041-1046. doi:10.1073/pnas.0909047107

Sargaeva, Nadezda P., Lin, Cheng and O'Connor, Peter B. (2009) Identification of aspartic and isoaspartic acid residues in amyloid beta peptides, including A beta 1-42, using electron-ion reactions. Analytical Chemistry, Vol.81 (No.23). pp. 9778-9786. doi:10.1021/ac901677t

Mathur, Raman and O'Connor, Peter B. (2009) Artifacts in fourier transform mass spectrometry. Rapid Communications in Mass Spectrometry, Vol.23 (No.4). pp. 523-529. doi:10.1002/rcm.3904

Mathur, Raman, Knepper, R. W. and O'Connor, Peter B. (2008) A low-noise broadband cryogenic preamplifier operated in a high-field superconducting magnet. IEEE Transactions on Applied Superconductivity, Vol.18 (No.4). pp. 1781-1789. doi:10.1109/TASC.2008.2007272

Lin, Cheng, Cournoyer, Jason J. and O'Connor, Peter B. (2008) Probing the gas-phase folding kinetics of peptide ions by IR activated DR-ECD. Journal of The American Society for Mass Spectrometry, Vol.19 (No.6). pp. 780-789. doi:10.1016/j.jasms.2008.01.001

Li, Xiaojuan, Cournoyer, Jason J., Lin, Cheng and O'Connor, Peter B. (2008) Use of 18O Labels to monitor deamidation during protein and peptide sample processing. Journal of The American Society for Mass Spectrometry, Vol.19 (No.6). pp. 855-864. doi:10.1016/j.jasms.2008.02.011

Li, X., Cournoya, J., Lin, C. and O'Connor, Peter B. (2008) The effect of fixed charge modifications on electron capture dissociation. Journal of The American Society for Mass Spectrometry, Vol.19 (No.10). pp. 1514-1526. doi:10.1016/j.jasms.2008.06.014