Journal Article

Acevedo-Garcia, Johanna, Gruner, Katrin, Reinstädler, Anja, Kemen, Ariane, Kemen, Eric, Cao, Lingxue, Takken, Frank L. W., Reitz, Marco U., Schäfer, Patrick, O’Connell, Richard J., Kusch, Stefan, Kuhn, Hannah and Panstruga, Ralph (2017) The powdery mildew-resistant Arabidopsis mlo2 mlo6 mlo12 triple mutant displays altered infection phenotypes with diverse types of phytopathogens. Scientific Reports, 7 (1). 9319. doi:10.1038/s41598-017-07188-7

Adams, Sally and Carré, Isabelle A. (2011) Downstream of the plant circadian clock : output pathways for the control of physiology and development. Essays in Biochemistry, Vol.49 . pp. 53-69. doi:10.1042/BSE0490053

Adams, Sally, Grundy, Jack, Veflingstad, Siren R., Dyer, Nigel, Hannah, Matthew, Ott, Sascha and Carré, Isabelle A. (2018) Circadian control of abscisic acid biosynthesis and signalling pathways revealed by genome-wide analysis of LHY binding targets. New Phytologist, 220 (3). pp. 893-907. doi:10.1111/nph.15415

Adams, Sally, Manfield, Ian, Stockley, Peter and Carré, Isabelle A. (2015) Revised morning loops of the Arabidopsis circadian clock based on analyses of direct regulatory interactions. PLoS One, 10 (12). e0143943. doi:10.1371/journal.pone.0143943

Akman, Ozgur E., Rand, D. A. (David A.), Brown, Paul E. and Millar, A. J. (Andrew J.) (2010) Robustness from flexibility in the fungal circadian clock. BMC Systems Biology, Vol.4 (No.88). doi:10.1186/1752-0509-4-88

Alberti, Fabrizio (2016) Current trends in natural products research from the CBNP10 Symposium at Warwick. Exchanges: the Warwick Research Journal, 4 (1).

Alberti, Fabrizio, Foster, Gary D. and Bailey, Andy M. (2017) Natural products from filamentous fungi and production by heterologous expression. Applied Microbiology and Biotechnology, 101 (2). pp. 493-500. doi:10.1007/s00253-016-8034-2

Alberti, Fabrizio, Kaleem, Saraa and Weaver, Jack (2020) Recent developments of tools for genome and metabolome studies in basidiomycete fungi and their application to natural product research. Biology Open, 9 (12). bio056010. doi:10.1242/bio.056010

Albornoz, Felipe E., Hayes, Patrick E., Orchard, Suzanne, Clode, Peta L., Nazeri, Nazanin, Standish, Rachel J., Dickie, Ian A., Bending, G. D., Hilton, Sally and Ryan, Megan H. (2020) First cryo-scanning electron microscopy images and X-ray microanalyses of mucoromycotinian fine root endophytes in vascular plants. Frontiers in Microbiology, 11 . 2018. doi:10.3389/fmicb.2020.02018

Albornoz, Felipe E., Orchard, Suzanne, Standish, Rachel J., Dickie, Ian A., Bending, G. D., Hilton, Sally, Lardner, Tim, Foster, Kevin J., Gleeson, Deirdre B., Bougoure, Jeremy, Barbetti, Martin J., You, Ming Pei and Ryan, Megan H. (2020) Evidence for niche differentiation in the environmental responses of co-occurring mucoromycotinian fine root endophytes and glomeromycotinian arbuscular mycorrhizal fungi. Microbial Ecology . doi:10.1007/s00248-020-01628-0 (In Press)

Alexandersson, Erik, Becker, John V. W., Jacobson, Dan, Nguema-Ona, Eric, Steyn, Cobus, Denby, Katherine J. and Vivier, Melané A. (2011) Constitutive expression of a grapevine polygalacturonase-inhibiting protein affects gene expression and cell wall properties in uninfected tobacco. BMC Research Notes, Vol.4 (No.1). p. 493. doi:10.1186/1756-0500-4-493

Ali, Muhammad Amjad, Wieczorek, Krzysztof, Kreil, David and Bohlmann, Holger (2014) The beet cyst nematode Heterodera schachtii modulates the expression of WRKY transcription factors in syncytia to favour its development in a Arabidopsis roots. PLoS One, Volume 9 (Number 7). Article number e102360. doi:10.1371/journal.pone.0102360

Allaby, Robin G., Ware, Roselyn and Kistler, Logan (2019) A re-evaluation of the domestication bottleneck from archaeogenomic evidence. Evolutionary Applications, 12 (1). pp. 29-37. doi:10.1111/eva.12680

Allen, Stuart C. H., Moore, Katherine A. H., Marsden, Catherine J., Fülöp, Vilmos, Moffat, Kevin G., Lord, Mike, Ladds, Graham and Roberts, L. M. (Lynne M.) (2007) The isolation and characterisation of temperature-dependent Ricin A chain molecules in Saccharomyces cerevisiae. FEBS Journal, Vol.274 (No.21). pp. 5586-5599. doi:10.1111/j.1742-4658.2007.06080.x

Allender, Charlotte J. and King , Graham J. (2010) Origins of the amphiploid species Brassica napus L. investigated by chloroplast and nuclear molecular markers. BMC Plant Biology, Vol.10 (Article 54). doi:10.1186/1471-2229-10-54

(2020) Extensive signal integration by the phytohormone protein network. Nature, 583 (7815). pp. 271-276. doi:10.1038/s41586-020-2460-0

Amoateng, Patrick, Tagoe, Thomas A., Karikari, Thomas K., Kukuia, Kennedy K. E., Osei-Safo, Dorcas, Woode, Eric, Frenguelli, Bruno G. and Kombian, Samuel B. (2021) Synedrella nodiflora extract depresses excitatory synaptic transmission and chemically-induced in vitro seizures in the rat hippocampus. Frontiers in Pharmacology, 12 . 610025. doi:10.3389/fphar.2021.610025 (In Press)

An, Hong, Qi, Xinshuai, Gaynor, Michelle L., Hao, Yue, Gebken, Sarah C., Mabry, Makenzie E., McAlvay, Alex C., Teakle, Graham R., Conant, Gavin C., Barker, Michael S., Fu, Tingdong, Yi, Bin and Pires, J. Chris (2019) Transcriptome and organellar sequencing highlights the complex origin and diversification of allotetraploid Brassica napus. Nature Communications, 10 (1). 2878. doi:10.1038/s41467-019-10757-1

Antunez-Sanchez, Javier, Naish, Matthew, Ramirez-Prado, Juan Sebastian, Ohno, Sho, Huang, Ying, Dawson, Alexander, Opassathian, Korawit, Manza-Mianza, Deborah, Ariel, Federico, Raynaud, Cécile, Wibowo, Anjar, Daron, Josquin, Ueda, Minako, Latrasse, David , Slotkin, R. Keith, Weigel, Detlef, Benhamed, Moussa and Gutierrez-Marcos, José F. (2020) A new role for histone demethylases in the maintenance of plant genome integrity. eLife, 9 . e58533. doi:10.7554/elife.58533

Ar Rashid, Md. Harun, Cheng, Wei and Thomas, Brian (2019) Temporal and spatial expression of Arabidopsis gene homologs control daylength adaptation and bulb formation in onion (Allium cepa L.). Scientific Reports, 9 . 14629 . doi:10.1038/s41598-019-51262-1

Armitage, Andrew D., Cockerton, Helen M., Sreenivasaprasad, Surapareddy, Woodhall, James, Lane, Charles R., Harrison, Richard J. and Clarkson, John P. (2020) Genomics evolutionary history and diagnostics of the Alternaria alternata Species group including apple and Asian pear pathotypes. Frontiers in Microbiology, 10 . 3124. doi:10.3389/fmicb.2019.03124

Armitage, Andrew D., Taylor, Andrew, Sobczyk, Maria K., Baxter, Laura, Greenfield, Bethany P. J., Bates, Helen J., Wilson, Fiona, Jackson, Alison C., Ott, Sascha, Harrison, Richard J. and Clarkson, John P. (2018) Characterisation of pathogen-specific regions and novel effector candidates in Fusarium oxysporum f. sp. cepae. Scientific Reports, 8 (1). 13530 . doi:10.1038/s41598-018-30335-7

Arnold, David (2008) Plant capitalism and company science: the Indian career of Nathaniel Wallich. Modern Asian Studies, Vol.42 (No.5). pp. 899-928. doi:10.1017/S0026749X0700296X

Arrieta, Jorge, Polin, Marco, Saleta-Piersanti, Ramon and Tuval, Idan (2019) Light control of localized photobioconvection. Physical Review Letters, 123 (15). 158101. doi:10.1103/PhysRevLett.123.158101

Atwell, Susanna, Corwin, Jason A., Soltis, Nicole E., Subedy, Anushryia, Denby, Katherine J. and Kliebenstein, Daniel James (2015) Whole genome resequencing of Botrytis cinerea isolates identifies high levels of standing diversity. Frontiers in Microbiology, 6 . pp. 1-14. 996. doi:10.3389/fmicb.2015.00996

Awan, Sajjad Zahoor, Chandler, Jake Owen, Harrison, Peter J., Sergeant, Martin J., Bugg, Tim and Thompson, Andrew David (2017) Promotion of germination using hydroxamic acid inhibitors of 9-cis-epoxycarotenoid dioxygenase. Frontiers in Plant Science, 8 . 357. doi:10.3389/fpls.2017.00357

Awan, Sajjad Zahoor, Footitt, Steven and Finch-Savage, William E. (2018) Interaction of maternal environment and allelic differences in seed vigour genes determines seed performance in Brassica oleracea. Plant Journal, 94 (6). pp. 1098-1108. doi:10.1111/tpj.13922

Bailey, Andy M., Alberti, Fabrizio, Kilaru, Sreedhar, Collins, Catherine M., de Mattos-Shipley, Kate, Hartley, Amanda J., Hayes, Patrick, Griffin, Alison, Lazarus, Colin M., Cox, Russell J., Willis, Christine L., O’Dwyer, Karen, Spence, David W. and Foster, Gary D. (2016) Identification and manipulation of the pleuromutilin gene cluster from Clitopilus passeckerianus for increased rapid antibiotic production. Scientific Reports, 6 (1). doi:10.1038/srep25202

Bailey, Mark, Srivastava, Anjil, Conti, Lucio, Nelis, Stuart, Zhang, Cunjin, Florance, Hannah, Love, Andrew, Milner, Joel, Napier, R. (Richard), Grant, Murray R. and Sadanandom, Ari (2016) Stability of small ubiquitin-like modifier (SUMO) proteases OVERLY TOLERANT TO SALT1 and -2 modulates salicylic acid signalling and SUMO1/2 conjugation in Arabidopsis thaliana. Journal of Experimental Botany, 67 (1). pp. 353-363. doi:10.1093/jxb/erv468

Baker, Lewis A., Horbury, Michael D., Greenough, Simon E., Allais, Florent, Walsh, Patrick S., Habershon, Scott and Stavros, Vasilios G. (2015) Ultrafast photoprotecting sunscreens in natural plants. The Journal of Physical Chemistry Letters, 7 (1). pp. 56-61. doi:10.1021/acs.jpclett.5b02474

Banks, Alice M., Song, Lijiang, Challis, Gregory L., Bailey, Andy M. and Foster, Gary D. (2020) Bovistol B, bovistol D and strossmayerin : Sesquiterpene metabolites from the culture filtrate of the basidiomycete Coprinopsis strossmayeri. PLoS One, 15 (4). e0229925. doi:10.1371/journal.pone.0229925

Barnes, Christopher J., Burns, Caitlin A., van der Gast, Christopher J., McNamara, Niall P. and Bending, G. D. (2016) Spatio-temporal variation of core and satellite arbuscular mycorrhizal fungus communities in Miscanthus giganteus. Frontiers in Microbiology, 7 . 1278. doi:10.3389/fmicb.2016.01278

Barnes, Christopher J., van der Gast, Christopher J., Burns, Caitlin A., McNamara, Niall P. and Bending, G. D. (2016) Temporally variable geographical distance effects contribute to the assembly of root-associated fungal communities. Frontiers in Microbiology, 7 . pp. 1-13. 195. doi:10.3389/fmicb.2016.00195

Baroncelli, Riccardo, Amby, Daniel Buchvaldt, Zapparata, Antonio, Sarrocco, Sabrina, Vannacci, Giovanni, Le Floch, Gaétan, Harrison, Richard J., Holub, E. B., Sukno, Serenella A., Sreenivasaprasad, Surapareddy and Thon, Michael R. (2016) Gene family expansions and contractions are associated with host range in plant pathogens of the genus Colletotrichum. BMC Genomics, 17 (1). 555. doi:10.1186/s12864-016-2917-6

Baroncelli, Riccardo, Sreenivasaprasad, S., Sukno, S. A., Thon, M. R. and Holub, E. B. (2014) Draft genome sequence of Colletotrichum acutatum sensu lato (Colletotrichum fioriniae). Genome Announcements, Volume 2 (Number 2). e00112-e00114. doi:10.1128/genomeA.00112-14

Barons, Martine J., Hanea, Anca M., Wright, Sophia K., Baldock, Katherine C. R., Wilfert, Lena, Chandler, Dave, Datta, Samik, Fannon, Jessica, Hartfield, Chris, Lucas, Andrew, Ollerton, Jeff, Potts, Simon G. and Carreck, Norman L. (2018) Assessment of the response of pollinator abundance to environmental pressures using structured expert elicitation. Journal of Apicultural Research, 57 (5). pp. 593-604. doi:10.1080/00218839.2018.1494891

Baxter, Laura, Jironkin, Aleksey, Hickman, R. D. G., Moore, Jonathan D., Barrington, Christopher, Krusche, Peter, Dyer, Nigel, Buchanan-Wollaston, Vicky, Tiskin, Alexander, Beynon, Jim, Denby, Katherine J. and Ott, Sascha (2012) Conserved noncoding sequences highlight shared components of regulatory networks in dicotyledonous plants. The Plant Cell, Vol.24 (No.10). pp. 3949-3965. doi:10.1105/tpc.112.103010

Bechtold, Ulrike, Albihlal, Waleed S., Lawson, Tracy, Fryer, Michael J., Sparrow, Penelope A. C., Richard, François, Persad, Ramona, Bowden, Laura, Hickman, Richard D. G., Martin, Cathie, Beynon, Jim, Buchanan-Wollaston, Vicky, Baker, N. R., Morison, James I. L., Schoffl, Friedrich, Ott, Sascha and Mullineaux, Philip M. (2013) Arabidopsis HEAT SHOCK TRANSCRIPTION FACTORA1b overexpression enhances water productivity, resistance to drought, and infection. Journal of Experimental Botany, Volume 64 (Number 11). pp. 3467-3481. doi:10.1093/jxb/ert185

(2016) Time-series transcriptomics reveals that AGAMOUS-LIKE22 affects primary metabolism and developmental processes in drought-stressed Arabidopsis. The Plant Cell, 28 (2). pp. 345-366. doi:10.1105/tpc.15.00910

Berry, P. M. (Peter M.), Teakle, Graham R., Foulkes, John, White, Philip J. and Spink, J. H. (John H.) (2008) Breeding for improved nitrogen use efficiency in oilseed rape. Acta Horticulturae, Vol.867 .

Bianchet, Chantal, Wong, Aloysius, Quaglia, Mara, Alqurashi, May, Gehring, Chris, Ntoukakis, Vardis and Pasqualini, Stefania (2019) An Arabidopsis thaliana leucine-rich repeat protein harbors an adenylyl cyclase catalytic center and affects responses to pathogens. Journal of Plant Physiology, 232 . pp. 12-22. doi:10.1016/j.jplph.2018.10.025

Bila, J., Mortensen, C. N., Andresen, M., Vicente, Joana G. and Wulff, E. G. (2013) Xanthomonas campestris pv. campestris race 1 is the main causal agent of black rot of Brassicas in Southern Mozambique. African Journal of Biotechnology, Volume 12 (Number 6). pp. 602-610.

Boniecka, Justyna, Prusińska, Justyna, Dąbrowska, Grażyna B. and Goc, Anna (2017) Within and beyond the stringent response-RSH and (p)ppGpp in plants. Planta, 246 (5). pp. 817-842. doi:10.1007/s00425-017-2780-y

Borhan, Mohammad H., Holub, E. B., Beynon, Jim, Rozwadowski, Kevin and Rimmer, Samuel Roger (2004) The Arabidopsis TIR-NB-LRR GeneRAC1 confers resistance to Albugo candida (white rust) and is dependent on EDS1 but not PAD4. Molecular Plant-Microbe Interactions, Volume 17 (Number 7). pp. 711-719. doi:10.1094/MPMI.2004.17.7.711

Bos, Jorunn I. B., Armstrong, Miles R., Gilroy, Eleanor M., Boevink, Petra C., Hein, Ingo, Taylor, Rosalind M., Zhendong, Tian, Engelhardt, Stefan, Vetukuri, Ramesh R., Harrower, Brian, Dixelius, Christina, Bryan, Glenn J., Sadanandom, Ari, Whisson, Stephen C., Kamoun, Sophien and Birch, Paul R. J. (2010) Phytophthora infestans effector AVR3a is essential for virulence and manipulates plant immunity by stabilizing host E3 ligase CMPG1. Proceedings of the National Academy of Sciences, Vol.107 (No.21). pp. 9909-9914. doi:10.1073/pnas.0914408107

(2011) High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell, The, Vol.23 (No.3). pp. 873-894. doi:10.1105/tpc.111.083345

Brestovitsky, Anna and Ezer, Daphne (2019) A mass participatory experiment provides a rich temporal profile of temperature response in spring onions. Plant Direct, 3 (3). e00126. doi:10.1002/pld3.126

Brilli, Matteo, Trabocchi, Andrea, Weil, Tobias, Cavalieri, Duccio and Stefanini, Irene (2017) Relations between effects and structure of small bicyclic molecules on the complex model system saccharomyces cerevisiae. Frontiers in Pharmacology, 8 . 170. doi:10.3389/fphar.2017.00170

Broadley, Martin R., White, Philip J., Hammond, John P., Graham, Neil S. , Bowen, Helen C., Emmerson, Z. F., Fray, R. G. , Iannetta, P. P. M., McNicol, J. W. and May, Sean T. (2008) Evidence of neutral transcriptome evolution in plants. New Phytologist, Vol.180 (No.3). pp. 587-593. doi:10.1111/j.1469-8137.2008.02640.x

Brooks, Rhiannon and Dixon, Ann M. (2020) Revealing the mechanism of protein-lipid interactions for a putative membrane curvature sensor in plant endoplasmic reticulum. Biochimica et biophysica acta. Biomembranes, 1862 (3). 183160. doi:10.1016/j.bbamem.2019.183160

Brumley, Douglas R., Polin, Marco, Pedley, T. J. and Goldstein, Raymond E. (2012) Hydrodynamic synchronization and metachronal waves on the surface of the colonial alga Volvox carteri. Physical Review Letters, Volume 109 (Number 26). Article number 268102 . doi:10.1103/PhysRevLett.109.268102

Bräutigam, Katharina, Vining, Kelly J., Lafon-Placette, Clément, Fossdal, Carl G., Mirouze, Marie, Jose, Gutiérrez-Marcos, Fluch, Silvia, Fraga, Mario Fernández, Guevara, M. Ángeles, Abarca, Dolores, Johnsen, Øystein, Maury, Stéphane, Strauss, Steven H., Campbell, Malcolm M., Rohde, Antje, Díaz-Sala, Carmen and Cervera, María-Teresa (2013) Epigenetic regulation of adaptive responses of forest tree species to the environment. Ecology and Evolution, Volume 3 (Number 2). pp. 399-415. doi:10.1002/ece3.461

Buckley, James, Holub, E. B., Koch, Marcus A., Vergeer, Philippine and Mable, Barbara K. (2018) Restriction associated DNA-genotyping at multiple spatial scales in Arabidopsis lyrata reveals signatures of pathogen-mediated selection. BMC Genomics, 19 (1). 496. doi:10.1186/s12864-018-4806-7

Bugg, Timothy D. H., Williamson, James J. and Rashid, Goran M. M. (2020) Bacterial enzymes for lignin depolymerisation : new biocatalysts for generation of renewable chemicals from biomass. Current Opinion in Chemical Biology, 55 . pp. 26-33. doi:10.1016/j.cbpa.2019.11.007

Burgess, Alexandra J., Retkute, Renata, Herman, Tiara and Murchie, Erik H. (2017) Exploring relationships between canopy architecture, light distribution, and photosynthesis in contrasting rice genotypes using 3D canopy reconstruction. Frontiers in Plant Science, 8 . 734. doi:10.3389/fpls.2017.00734

Burgess, Alexandra J., Retkute, Renata, Preston, Simon P., Jensen, Oliver E., Pound, Michael P., Pridmore, Tony P. and Murchie, Erik H. (2016) The 4-dimensional plant : effects of wind-induced canopy movement on light fluctuations and photosynthesis. Frontiers in Plant Science, 7 (1392). doi:10.3389/fpls.2016.01392

Busi, R. (Roberto), Neve, Paul and Powles, Stephen B. (2013) Evolved polygenic herbicide resistance in Lolium rigidum by low-dose herbicide selection within standing genetic variation. Evolutionary Applications, Volume 6 (Number 2). pp. 231-242. doi:10.1111/j.1752-4571.2012.00282.x

Busi, Roberto, Goggin, Danica E., Heap, Ian, Horak, Michael J., Jugulam, Mithila, Masters, Robert A., Napier, R., Riar, Dilpreet S., Satchivi, Norbert M., Torra, Joel, Westra, Phillip and Wright, Terry R. (2018) Weed resistance to synthetic auxin herbicides. Pest Management Science , 74 (10). pp. 2265-2276. doi:10.1002/ps.4823

Caillaud, Marie-Cécile, Wirthmueller, Lennart, Sklenar, Jan, Findlay, Kim, Piquerez, Sophie J. M., Jones, Alexandra M., Robatzek, Silke, Jones, Jonathan D. G. and Faulkner, Christine (2014) The plasmodesmal protein PDLP1 localises to haustoria-associated membranes during downy mildew infection and regulates callose deposition. PLoS Pathogens, Volume 10 (Number 11). Article number e1004496. doi:10.1371/journal.ppat.1004496

Cain, Peter, Holdermann, Iris, Sinning, Irmgard, Johnson, Arthur E. and Robinson, Colin (2011) Binding of chloroplast signal recognition particle to a thylakoid membrane protein substrate in aqueous solution and delineation of the cpSRP43–substrate interaction domain. Biochemical Journal, Vol.437 (No.1). pp. 149-155. doi:10.1042/BJ20110270

Calderón Villalobos, Luz Irina A, Lee, Sarah C., Oliveira, Cesar de, Ivetac, Anthony, Brandt, Wolfgang, Armitage, Lynne, Sheard, Laura B., Tan, Xu, Parry, Geraint, Mao, Haibin, Zheng, Ning, Napier, R. (Richard), Kepinski, Stefan and Estelle, Mark (2012) A combinatorial TIR1/AFB–Aux/IAA co-receptor system for differential sensing of auxin. Nature Chemical Biology, Volume 8 (Number 5). pp. 477-485. doi:10.1038/nchembio.926

Campbell, Kate, Vowinckel, Jakob, Mülleder, Michael, Malmsheimer, Silke, Lawrence, Nicola, Calvani, Enrica, Miller-Fleming, Leonor, Alam, Mohammad T., Christen, Stefan, Keller, Markus A. and Ralser, Markus (2015) Self-establishing communities enable cooperative metabolite exchange in a eukaryote. eLife, 4 . e09943.

Carrier, David J., Abu Bakar, Norliza Tendot, Swarup, Ranjan, Callaghan, Richard, Napier, R. (Richard), Bennett, Malcolm J. and Kerr, Ian D. (2008) The binding of auxin to the Arabidopsis auxin influx transporter AUX1. Plant Physiology, Volume 148 (Number 1). pp. 529-535. doi:10.1104/pp.108.122044

Carroll, Daire, Holden, Nicola, Gifford, Miriam L. and Dupuy, Lionel X. (2020) Framework for quantification of the dynamics of root colonization by pseudomonas fluorescens isolate SBW25. Frontiers in Microbiology, 11 . doi:10.3389/fmicb.2020.585443

Carter, Anthony D., Bonyadi, Roxanna and Gifford, Miriam L. (2013) The use of fluorescence-activated cell sorting in studying plant development and environmental responses. The International Journal of Developmental Biology, Volume 57 . pp. 545-552. doi:10.1387/ijdb.130195mg

Castillo-Lorenzo, E., Finch-Savage, William E., Seal, C. E. and Pritchard, H. W. (2019) Adaptive significance of functional germination traits in crop wild relatives of Brassica. Agricultural and Forest Meteorology, 264 . pp. 343-350. doi:10.1016/j.agrformet.2018.10.014

Cevik, Volkan, Boutrot, Freddy, Apel, Wiebke, Robert-Seilaniantz, Alexandre, Furzer, Oliver J., Redkar, Amey, Castel, Baptiste, Kover, Paula, Prince, David C., Holub, E. B. and Jones, Jonathan D. G. (2019) Transgressive segregation reveals mechanisms of Arabidopsis immunity to Brassica-infecting races of white rust (Albugo candida). Proceedings of the National Academy of Sciences, 116 (7). pp. 2767-2773. doi:10.1073/pnas.1812911116

Chandler, Dave, Cooper, Emily and Prince, Gillian (2019) Are there risks to wild European bumble bees from using commercial stocks of domesticated Bombus terrestris for crop pollination? Journal of Apicultural Research . pp. 1-17. doi:10.1080/00218839.2019.1637238

Chen, Pei, Xie, Fengwei, Tang, Fengzai and McNally, Tony (2021) Cooperative effects of cellulose nanocrystals and sepiolite when combined on ionic liquid plasticised chitosan materials. Polymers, 13 (4). 571. doi:10.3390/polym13040571

Chen, Pei, Xie, Fengwei, Tang, Fengzai and McNally, Tony (2020) Unexpected plasticization effects on the structure and properties of polyelectrolyte complexed chitosan/alginate materials. ACS Applied Polymer Materials, 2 (7). pp. 2957-2966. doi:10.1021/acsapm.0c00433

Chen, Pei, Zhang, Yiling, Qiao, Qian, Tao, Xiaoqi, Liu, Peng and Xie, Fengwei (2021) Comparison of the structure and properties of hydroxypropylated acid-hydrolysed maize starches with different amylose/amylopectin contents. Food Hydrocolloids, 110 . 106134. doi:10.1016/j.foodhyd.2020.106134

Chhun, Audam, Sousoni, Despoina, Aguilo-Ferretjans, Maria del Mar, Song, Lijiang, Corre, Christophe and Christie-Oleza, Joseph A. (2021) Phytoplankton trigger the production of cryptic metabolites in the marine actinobacterium Salinispora tropica. Microbial Biotechnology, 14 (1). pp. 291-306. doi:10.1111/1751-7915.13722

Chow, Michael, Sklepari, Meropi, Frigerio, Lorenzo and Dixon, Ann M. (2018) Bacterial expression, purification and biophysical characterization of the smallest plant reticulon isoform, RTNLB13. Protein Expression and Purification, 152 . pp. 31-39. doi:10.1016/j.pep.2018.06.015

Cools, Katherine, Chope, Gemma A., Hammond, John P., Thompson, Andrew J. and Terry, Leon A. (Leon Alexander) (2011) Onion gene expression in response to ethylene and 1-MCP. Plant Physiology, Vol.156 (No.3). pp. 1639-1652.

Couto, Daniel, Niebergall, Roda, Liang, Xiangxiu, Bücherl, Christoph A., Sklenar, Jan, Macho, Alberto P., Ntoukakis, Vardis, Derbyshire, Paul, Altenbach, Denise, Maclean, Dan, Robatzek, Silke, Uhrig, Joachim, Menke, Frank, Zhou, Jian-Min and Zipfel, Cyril (2016) The Arabidopsis protein phosphatase PP2C38 negatively regulates the central immune kinase BIK1. PLoS Pathogens, 12 (8). e1005811. doi:10.1371/journal.ppat.1005811

Cunliffe, Michael, Whiteley, Andrew S., Newbold, Lindsay, Oliver, Anna, Schäfer, Hendrik and Murrell, J. C. (J. Colin) (2009) Comparison of bacterioneuston and bacterioplankton dynamics during a phytoplankton bloom in a fjord mesocosm. Applied and Environmental Microbiology, Vol.75 (No.22). pp. 7173-7181. doi:10.1128/AEM.01374-09

Dai, Jinhuo, Nanayakkara, Sepa, Lamb, Thomas, Clark, Andrew J., Guo, Si-Xuan, Zhang, Jie, Patti, Antonio F. and Saito, Kei (2016) Effect of the N-based ligands in copper complexes for depolymerisation of lignin. New Journal of Chemistry, 40 (4). pp. 3511-3519. doi:10.1039/c5nj03152d

Davies, Laura R. and Allender, Charlotte J. (2017) Who is sowing our seeds? A systematic review of the use of plant genetic resources in research. Genetic Resources and Crop Evolution, 64 (8). pp. 1999-2008. doi:10.1007/s10722-017-0491-7

Davies, Lawrence O., Schäfer, Hendrik, Marshall, Samantha, Bramke, Irene, Oliver, Robin G. and Bending, G. D. (2013) Light structures phototroph, bacterial and fungal communities at the soil surface. PLoS One, Volume 8 (Number 7). Article number e69048. doi:10.1371/journal.pone.0069048

Davis, Seth J. and Millar, A. J. (Andrew J.) (2001) Watching the hands of the Arabidopsis biological clock. Genome Biology, Vol.2 (No.3). doi:10.1186/gb-2001-2-3-reviews1008

Dorati, Federico, Barrett, Glyn, Sanchez-Contreras, Maria, Arseneault, Tanya, José, Mateo, Studholme, David, Murillo, Jesús, Caballero, Primitivo, Waterfield, Nicholas R., Arnold, Dawn, Shaw, Liz and Jackson, Robert (2018) Coping with environmental eukaryotes : identification of Pseudomonas syringae genes during the interaction with alternative hosts or predators. Microorganisms, 6 (2). 32. doi:10.3390/microorganisms6020032

Dufresne, Alexis, Ostrowski, Martin, Scanlan, David J. , Garczarek, Laurence, Mazard, Sophie, Palenik, Brian P., Paulsen, Ian T., Tandeau de Marsac, Nicole, Johnson, Justin, Post, Anton F., Hess, Wolfgang R. and Partensky, Frédéric (2008) Unraveling the genomic mosaic of a ubiquitous genus of marine cyanobacteria. Genome Biology, Vol.9 (No.R90). Article no.R90. doi:10.1186/gb-2008-9-5-r90

Dupree, Ray, Simmons, Thomas J., Mortimer, Jennifer C., Patel, Dharmesh, Iuga, Dinu, Brown, Steven P. and Dupree, Paul (2015) Probing the molecular architecture of Arabidopsis thaliana secondary cell walls using two- and three-dimensional 13C solid state nuclear magnetic resonance spectroscopy. Biochemistry, Volume 54 (Number 14). pp. 2335-2345. doi:10.1021/bi501552k

Durek, P., Schmidt, R., Heazlewood, J. L., Jones, Alexandra M., MacLean, Daniel, Nagel, Alexander, Kersten, Birgit and Schulze, W. X. (2010) PhosPhAt : the Arabidopsis thaliana phosphorylation site database : an update. Nucleic Acids Research, Volume 38 (Supplement 1). D828-D834. doi:10.1093/nar/gkp810

Durr, Julius, Papareddy, Ranjith, Nakajima, Keiji and Gutierrez-Marcos, José F. (2018) Highly efficient heritable targeted deletions of gene clusters and non-coding regulatory regions in Arabidopsis using CRISPR/Cas9. Scientific Reports, 8 (1). 4443. doi:10.1038/s41598-018-22667-1

Edwards, Kieron D., Akman, Ozgur E., Knox, Kirsten, Lumsden, P. J., Thomson, Adrian W., Brown, Paul E., Pokhilko, Alexandra, Kozma-Bognar, Laszlo, Nagy, Ferenc, Rand, D. A. and Millar, A. J. (2010) Quantitative analysis of regulatory flexibility under changing environmental conditions. Molecular Systems Biology, Vol.6 (No.424). doi:10.1038/msb.2010.81

Eichmann, Ruth and Schäfer, P. (Patrick) (2012) The endoplasmic reticulum in plant immunity and cell death. Frontiers in Plant Science, Volume 3 . Article number 200. doi:10.3389/fpls.2012.00200

Erent, Muriel, Drummond, Douglas R. and Cross, R. A. (2012) S. pombe kinesins-8 promote both nucleation and catastrophe of microtubules. PLoS One, Vol.7 (No.2). e30738. doi:10.1371/journal.pone.0030738

Fan, Jun, Mohareb, Fady, Jones, Alexandra M. and Bessant, Conrad (2012) MRMaid : the SRM assay design tool for Arabidopsis and other species. Frontiers in Plant Science, Volume 3 . Article number 164. doi:10.3389/fpls.2012.00164

Feng, Jianfeng, Yi, Dongyun, Krishna, Ritesh, Guo, Shuixia and Buchanan-Wollaston, Vicky (2009) Listen to genes : dealing with microarray data in the frequency domain. PL o S One, Vol.4 (No.4). doi:10.1371/journal.pone.0005098

Finch-Savage, William E. and Footitt, Steven (2012) To germinate or not to germinate : a question of dormancy relief not germination stimulation. Seed Science Research, Vol.22 (No.4). pp. 243-248. doi:10.1017/S0960258512000165

Fita, Ana, Bowen, Helen C., Hayden, Rory M., Nuez, F., Picó, Belén and Hammond, John P. (2012) Diversity in expression of phosphorus (P) responsive genes in Cucumis Melo L. PLoS One, Vol.7 (No.4). Article no. e35387. doi:10.1371/journal.pone.0035387

Footitt, Steven, Awan, Sajjad Zahoor and Finch-Savage, William E. (2018) An improved method for the rapid isolation of RNA from Arabidopsis and seeds of other species high in polyphenols and polysaccharides. Seed Science Research, 28 (4). pp. 360-364. doi:10.1017/S0960258518000296

Footitt, Steven, Clay, Heather A., Dent, Katherine and Finch-Savage, William E. (2014) Environment sensing in spring-dispersed seeds of a winter annual Arabidopsis influences the regulation of dormancy to align germination potential with seasonal changes. New Phytologist, Volume 202 (Number 3). pp. 929-939. doi:10.1111/nph.12694

Footitt, Steven, Clewes, Rachel, Feeney, Mistianne, Finch-Savage, William E. and Frigerio, Lorenzo (2019) Aquaporins influence seed dormancy and germination in response to stress. Plant, Cell & Environment, 42 (8). pp. 2325-2339. doi:10.1111/pce.13561 (In Press)

Footitt, Steven, Hambidge, Angela J. and Finch-Savage, William E. (2020) Changes in phenological events in response to a global warming scenario reveal greater adaptability of winter annual compared to summer annual Arabidopsis ecotypes. Annals of Botany . mcaa141. doi:10.1093/aob/mcaa141

Footitt, Steven, Huang, Ziyue, Ölcer-Footitt, Hülya, Clay, Heather A., Finch-Savage, William E. and Kranner, I. (2018) The impact of global warming on germination and seedling emergence in Alliaria petiolata, a woodland species with dormancy loss dependent on low temperature. Plant Biology, 20 (4). pp. 632-690. doi:10.1111/plb.12720

Footitt, Steven, Palleschi, Simonetta, Fazio, Eugenio, Palomba, Raffaele, Finch-Savage, William E. and Silvestroni, Leopoldo (2016) Ultra-weak photon emission from the seed coat in response to temperature and humidity - a potential mechanism for environmental signal transduction in the soil seed bank. Photochemistry and Photobiology, 92 (5). pp. 678-687. doi:10.1111/php.12616

Footitt, Steven, Walley, Peter G., Lynn, James R. , Hambidge, A. J. (Angela J.), Penfield, Steven and Finch-Savage, William E. (2019) Trait analysis reveals DOG1 determines initial depth of seed dormancy, but not changes during dormancy cycling that result in seedling emergence timing. New Phytologist . doi:10.1111/nph.16081 (In Press)

Footitt, Steven, Ölcer-Footitt, Hülya, Hambidge, Angela J. and Finch-Savage, William E. (2017) A laboratory simulation of Arabidopsis seed dormancy cycling provides new insight into its regulation by clock genes and the dormancy-related genes DOG1 , MFT , CIPK23 and PHYA. Plant, Cell & Environment, 40 (8). pp. 1474-1486. doi:10.1111/pce.12940

Fukami, Hironobu, Chen, Chaolun Allen, Budd, Ann F., Collins, Allen, Wallace, Carden C., Chuang, Yao-Yang, Chen, Chienhsun, Dai, Chang-Feng, Iwao, Kenji, Sheppard, Charles (Charles R. C.) and Knowlton, Nancy (2008) Mitochondrial and nuclear genes suggest that stony corals are monophyletic but most families of stony corals are not (Order Scleractinia, Class Anthozoa, Phylum Cnidaria). PL o S One, Vol.3 (No.9). doi:10.1371/journal.pone.0003222

Gao, Yuan, Liu, Jun, Pan, Xukun, Liu, Dingrong, Napier, R. (Richard) and Dong, Liyao (2018) Quinclorac resistance induced by the suppression of the expression of 1-aminocyclopropane-1-carboxylic acid (ACC) synthase and ACC oxidase genes in Echinochloa crus-galli var. zelayensis. Pesticide Biochemistry and Physiology, 146 . pp. 25-32. doi:10.1016/j.pestbp.2018.02.005

Gastner, Michael T., Oborny, Beata, Zimmermann, D. K. and Pruessner, Gunnar (2009) Transition from connected to fragmented vegetation across an environmental gradient: scaling laws in ecotone geometry. American Naturalist, Vol.174 (No.1). E23-E39. doi:10.1086/599292

Gattolin, Stefano, Sorieul, Mathias and Frigerio, Lorenzo (2011) Mapping of tonoplast intrinsic proteins in maturing and germinating Arabidopsis seeds reveals dual localization of embryonic TIPs to the tonoplast and plasma membrane. Molecular Plant, Volume 4 (Number 1). pp. 180-189. doi:10.1093/mp/ssq051

Gattolin, Stefano, Sorieul, Mathias and Frigerio, Lorenzo (2010) Tonoplast intrinsic proteins and vacuolar identity. Biochemical Society Transactions, Vol.38 (No.3). pp. 769-773. doi:10.1042/BST0380769

Gattolin, Stefano, Sorieul, Mathias, Hunter, P. R. (Paul R.), Khonsari, Roman H. and Frigerio, Lorenzo (2009) In vivo imaging of the tonoplast intrinsic protein family in Arabidopsis roots. BMC Plant Biology, Vol.9 . Article 133. doi:10.1186/1471-2229-9-133

Geoffriau, E., Charpentier, T., Huet, S., Hägnefelt, A., Lopes, V., Nothnagel, T., Lohwasser, U., Mallor Gimenez, C. and Allender, Charlotte J. (2019) CarrotDiverse : understanding variation in a wild relative of carrot. Acta Horticulturae (1264). pp. 151-156. doi:10.17660/ActaHortic.2019.1264.18

Gifford, Miriam L., Banta, Joshua A., Katari, Manpreet S., Hulsmans, Jo, Chen, Lisa, Ristova, Daniela, Tranchina, Daniel, Purugganan, Michael D., Coruzzi, Gloria, Birnbaum, Kenneth D., Rosas, Ulises and Cibrian-Jaramillo, Angelica (2013) Plasticity regulators modulate specific root traits in discrete nitrogen environments. PLoS Genetics, Volume 9 (Number 9). Article number e1003760. doi:10.1371/journal.pgen.1003760

Gladders, P. (Peter), Smith, J. E., Kirkpatrick, L., Clewes, E., Grant, C., Barbara, Dez J., Barnes, A. V. and Lane, C. R. (2011) First record of verticillium wilt (Verticillium longisporum) in winter oilseed rape in the UK. New Disease Reports, Volume 23 (Number 8). doi:10.5197/j.2044-0588.2011.023.008

Gosling, Paul, Mead, A. (Andrew), Proctor, Maude, Hammond, John P. and Bending, G. D. (2013) Contrasting arbuscular mycorrhizal communities colonizing different host plants show a similar response to a soil phosphorus concentration gradient. New Phytologist, Volume 198 (Number 2). pp. 546-556. doi:10.1111/nph.12169

Granja-Travez, R. S., Wilkinson, Rachael C., Persinoti, G. F., Squina, F. M., Fülöp, Vilmos and Bugg, Tim (2018) Structural and functional characterisation of multi-copper oxidase CueO from lignin-degrading bacterium Ochrobactrum sp. reveal its activity towards lignin model compounds and lignosulfonate. FEBS Journal, 285 (9). pp. 1684-1700. doi:10.1111/febs.14437

Granja-Travez, Rommel Santiago, Persinoti, Gabriela Felix, Squina, Fabio M. and Bugg, Timothy D. H. (2020) Functional genomic analysis of bacterial lignin degraders : diversity in mechanisms of lignin oxidation and metabolism. Applied Microbiology and Biotechnology, 104 . pp. 3305-3320. doi:10.1007/s00253-019-10318-y

Grantham, Nicholas J., Wurman-Rodrich, Joel, Terrett, Oliver M., Lyczakowski, Jan J., Stott, Katherine, Iuga, Dinu, Simmons, Thomas J., Durand-Tardif, Mylene, Brown, Steven P., Dupree, Ray, Busse-Wicher, Marta and Dupree, Paul (2017) An even pattern of xylan substitution is critical for interaction with cellulose in plant cell walls. Nature Plants, 3 (11). pp. 859-865. doi:10.1038/s41477-017-0030-8

Grierson, Claire, Barnes, S. R., Chase, Mark W., Clarke, M., Grierson, Don, Edwards, K. J., Jellis, G. J., Jones, Jonathan D. G., Knapp, Sandra, Oldroyd, G., Poppy, Guy M., Temple, P., Williams, Roger and Bastow, Ruth (2011) One hundred important questions facing plant science research. New Phytologist, Vol.192 (No.1). pp. 6-12. doi:10.1111/j.1469-8137.2011.03859.x

Grønlund, Jesper T., Eyres, Alison, Kumar, Sanjeev, Buchanan-Wollaston, Vicky and Gifford, Miriam L. (2012) Cell specific analysis of Arabidopsis leaves using fluorescence activated cell sorting. Journal of Visualized Experiments (No.68). e4214. doi:10.3791/4214

Gutaker , Rafal M. , Zaidem, Maricris, Fu, Yong-Bi , Diederichsen, Axel, Smith, Oliver, Ware, Roselyn and Allaby, Robin G. (2018) Flax latitudinal adaptation at LuTFL1 altered architecture and promoted fiber production. Scientific Reports, 9 (976). doi:10.1038/s41598-018-37086-5

Hackenberg, Dieter, Asare-Bediako, Elvis, Baker, Adam R., Walley, Peter Glen, Jenner, Carol E., Greer, Shannon, Bramham, Lawrence, Batley, Jacqueline, Edwards, David, Delourme, Regine, Barker, Guy C., Teakle, Graham R. and Walsh, John A. (2020) Identification and QTL mapping of resistance to Turnip yellows virus (TuYV) in oilseed rape, Brassica napus. Theoretical and Applied Genetics, 133 (2). pp. 383-393. doi:10.1007/s00122-019-03469-z

Hadlington, Jane L., Santoro, Aniello, Nuttall, James, Denecke, J. (Jurgen), Ma, Julian K.-C., Vitale, A. (Alessandro) and Frigerio, Lorenzo (2003) The c-terminal extension of a hybrid immunoglobulin A/G heavy chain is responsible for its Golgi-mediated sorting to the vacuole. Molecular Biology of the Cell, Vol.14 (No.6). pp. 2592-2602. doi:10.1091/mbc.E02-11-0771

Hartman, Sjon, Liu, Zeguang, van Veen, Hans, Vicente, Jorge, Reinen, Emilie, Martopawiro, Shanice, Zhang, Hongtao, van Dongen, Nienke, Bosman, Femke, Bassel, George, Visser, Eric J. W., Bailey-Serres, Julia, Theodoulou, Frederica L., Hebelstrup, Kim H., Gibbs, Daniel J., Holdsworth, Michael J., Sasidharan, Rashmi and Voesenek, Laurentius A. C. J. (2019) Ethylene-mediated nitric oxide depletion pre-adapts plants to hypoxia stress. Nature Communications, 10 (1). 4020 . doi:10.1038/s41467-019-12045-4

Hartmann, Manuela, Gómez-Pereira, Paola R., Grob, Carolina, Ostrowski, Martin, Scanlan, David J. and Zubkov, Mikhail V. (2014) Efficient CO2 fixation by surface Prochlorococcus in the Atlantic Ocean. The ISME Journal, Volume 8 (Number 11). pp. 2280-2289. doi:10.1038/ismej.2014.56

Hartwright, Lucy M., Hunter, Paul J. and Walsh, John A. (2009) A comparison of Olpidium isolates from a range of host plants using internal transcribed spacer sequence analysis and host range studies. Fungal Biology, Vol.114 (No.1). pp. 26-33. doi:10.1016/j.mycres.2009.09.008

He, Hai, Bian, Huawei, Xie, Fengwei and Cheng, Ling (2021) Different effects of pectin and κ-carrageenan on the multiscale structures and in vitro digestibility of extruded rice starch. Food Hydrocolloids, 111 . 106216. doi:10.1016/j.foodhyd.2020.106216

Helliwell, Katherine Emma, Lawrence, Andrew David, Holzer, Andre, Kudahl, Johan, Sasso, Severin, Kräutler, Bernhard , Scanlan, David J. , Warren , Martin James and Smith, Alison Gail (2016) Cyanobacteria and eukaryotic algae use different chemical variants of vitamin B12. Current Biology, 26 (8). pp. 999-1008. doi:10.1016/j.cub.2016.02.041

Hilton, Sally, Bennett, Amanda J., Keane, Gary, Bending, G. D., Chandler, David, Stobart, Ron and Mills, P. R. (2013) Impact of shortened crop rotation of oilseed rape on soil and rhizosphere microbial diversity in relation to yield decline. PLoS One, Volume 8 (Number 4). e59859. doi:10.1371/journal.pone.0059859

Hilton, Sally, Picot, Emma, Schreiter, Susanne, Bass, David, Norman, Keith, Oliver, Anna E., Moore, Jonathan D., Mauchline, Tim H., Mills, Peter R., Teakle, Graham R., Clark, Ian. M., Hirsch, Penny. R., van der Gast, Christopher J. and Bending, G. D. (2021) Identification of microbial signatures linked to oilseed rape yield decline at the landscape scale. Microbiome, 9 . 19. doi:10.1186/s40168-020-00972-0

Ho, Thien, Wang, Liang, Huang, Linfeng, Li, Zhigang, Pallett, Denise W., Dalmay, Tamas, Ohshima, Kazusato, Walsh, John A. and Wang, Hui (2010) Nucleotide bias of DCL and AGO in plant anti-virus gene silencing. Protein & Cell, Vol.1 (No.9). pp. 847-858. doi:10.1007/s13238-010-0100-4

Holub, E. B. (2008) Natural history of Arabidopsis thaliana and oomycete symbioses. European Journal of Plant Pathology, Vol.122 (No.1). pp. 91-109. doi:10.1007/s10658-008-9286-1

Hong, Yiguo and Jackson, Stephen D. (2015) Floral induction and flower formation : the role and potential applications of miRNAs. Plant Biotechnology Journal, 13 (3). pp. 282-292. doi:10.1111/pbi.12340

Horbury, Michael D., Holt, Emily L., Mouterde, Lous M. M., Balaguer, Patrick, Cebrian, Juan, Blasco, Laurent, Allais, Florent and Stavros, Vasilios G. (2019) Towards symmetry driven and nature inspired UV filter design. Nature Communications, 10 . 4748 . doi:10.1038/s41467-019-12719-z

Horbury, Michael D., Quan, Wen-Dong, Flourat, A. L., Allais, F. and Stavros, Vasilios G. (2017) Elucidating nuclear motions in a plant sunscreen during photoisomerization through solvent viscosity effects. Physical Chemistry Chemical Physics, 19 (31). pp. 21127-21131. doi:10.1039/c7cp04070a

Huang, Ruijie, Zhong, Lei, Xie, Fengwei, Wei, Liming, Gan, Lanfang, Wang, Xuejiao and Liao, Anping (2019) Purification, characterization and degradation performance of a novel dextranase from Penicillium cyclopium CICC-4022. International Journal of Molecular Sciences, 20 (6). 1360. doi:10.3390/ijms20061360

Hunt, E. (Emma), Gattolin, Stefano, Newbury, H. J., Bale, J. S. (Jeffrey S.), Tseng, Hua-Ming, Barrett, D. A. (David A.) and Pritchard, J. (Jeremy) (2010) A mutation in amino acid permease AAP6 reduces the amino acid content of the Arabidopsis sieve elements but leaves aphid herbivores unaffected. Journal of Experimental Botany, Vol.61 (No.1). pp. 55-64. doi:10.1093/jxb/erp274

Hunter, Paul J., Atkinson, Laura D., Vickers, Laura, Lignou, Stella, Oruna-Concha, Maria Jose, Pink, David, Hand, Paul, Barker, Guy C., Wagstaff, Carol and Monaghan, James M. (2017) Oxidative discolouration in whole-head and cut lettuce : biochemical and environmental influences on a complex phenotype and potential breeding strategies to improve shelf-life. Euphytica, 213 (8). 180. doi:10.1007/s10681-017-1964-7

Hunter, Paul J., Teakle, Graham R. and Bending, G. D. (2014) Root traits and microbial community interactions in relation to phosphorus availability and acquisition, with particular reference to Brassica. Frontiers in Plant Science, Volume 5 . doi:10.3389/fpls.2014.00027

Irwin, Judith A., Lister, Clare, Soumpourou, Eleni, Zhang, Yanwen, Howell, Elaine C., Teakle, Graham R. and Dean, Caroline (2012) Functional alleles of the flowering time regulator FRIGIDA in the Brassica oleracea genome. BMC Plant Biology, Vol.12 (No.1). p. 21. doi:10.1186/1471-2229-12-21

Jackson, Stephen D. and Hong, Yiguo (2012) Systemic movement of FT mRNA and a possible role in floral induction. Frontiers in Plant Science, Vol.3 . doi:10.3389/fpls.2012.00127

Jannat, Shopan, Mou, Haipeng, Zhang, Lili, Zhang, Changtong, Ma, Weiwei, Walsh, John A., Hu, Zhongyuan, Yang, Jinghua and Zhang, Mingfang (2017) Eukaryotic translation initiation factor 2B-beta (eIF2B β), a new class of plant virus resistance gene. The Plant Journal, 90 (5). pp. 929-940. doi:10.1111/tpj.13519

Jeanneret, Raphaël, Contino, Matteo and Polin, Marco (2016) A brief introduction to the model microswimmer Chlamydomonas reinhardtii. The European Physical Journal Special Topics, 225 (11-12). pp. 2141-2156. doi:10.1140/epjst/e2016-60065-3

Jeanneret, Raphaël, Pushkin, Dmitri O., Kantsler, Vasily and Polin, Marco (2016) Entrainment dominates the interaction of microalgae with micron-sized objects. Nature Communications, 7 . 12518. doi:10.1038/ncomms12518

Jiang, Xue, Zerfaß, Christian, Eichmann, Ruth, Asally, Munehiro, Schäfer, Patrick and Soyer, Orkun S. (2018) Impact of spatial organization on a novel auxotrophic interaction among soil microbes. ISME Journal, 12 . pp. 1443-1456. doi:10.1038/s41396-018-0095-z

Jouet, Agathe, Saunders, Diane G. O., McMullan, Mark, Ward, Ben, Furzer, Oliver, Jupe, Florian, Cevik, Volkan, Hein, Ingo, Thilliez, Gaetan J. A., Holub, E. B., van Oosterhout, Cock and Jones, Jonathan D. G. (2019) Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field. New Phytologist, 221 (3). pp. 1529-1543. doi:10.1111/nph.15417

Jurić, Ivan, González-Pérez, Vinicio, Hibberd, Julian, Edwards, Gerald and Burroughs, Nigel John (2017) Size matters for single-cell C4 photosynthesis in Bienertia. Journal of Experimental Botany, 68 (2). pp. 255-267. doi:10.1093/jxb/erw374

Jurić, Ivan, Hibberd, Julian, Blatt, Mike R. and Burroughs, Nigel John (2019) Computational modelling predicts substantial carbon assimilation gains for C3 plants with a single-celled C4 biochemical pump. PLoS Computational Biology, 15 (9). e1007373. doi:10.1371/journal.pcbi.1007373

Kamal, Hira, Minhas, Fayyaz ul Amir Afsar, Farooq, Muhammad, Tripathi, Diwaker, Hamza, Muhammad, Mustafa, Roma, Khan, Muhammad Zuhaib, Mansoor, Shahid, Pappu, Hanu R. and Amin, Imran (2019) In silico prediction and validations of domains involved in gossypium hirsutum SnRK1 protein interaction with cotton leaf curl multan betasatellite encoded βC1. Frontiers in Plant Science, 10 . 656. doi:10.3389/fpls.2019.00656

Katschnig, Diana, Jaarsma, Rinse, Almeida, Pedro, Rozema, J. and Schat, Henk (2014) Differences in proton pumping and Na/H exchange at the leaf cell tonoplast between a halophyte and a glycophyte. AOB plants, 6 . pp. 1-13. plu023. doi:10.1093/aobpla/plu023

Kaur, Divjot, Alkhder, Duha, Corre, Christophe and Alberti, Fabrizio (2020) Engineering isoprenoid quinone production in yeast. ACS Synthetic Biology, 9 (9). pp. 2239-2245. doi:10.1021/acssynbio.0c00081

Kelly, Amélie A., Quettier, Anne-Laure, Shaw, Eve and Eastmond, Peter J. (2011) Seed storage oil mobilization is important but not essential for germination or seedling establishment in Arabidopsis. Plant Physiology, Vol.157 (No.2). pp. 866-875. doi:10.1104/pp.111.181784

Kemen, Eric, Gardiner, Anastasia, Schultz-Larsen, Torsten, Kemen, Ariane C., Balmuth, Alexi L., Robert-Seilaniantz, Alexandre, Bailey, Kate, Holub, E. B., Studholme, David J., MacLean, Daniel and Jones, Jonathan D. G. (2011) Gene gain and loss during evolution of obligate parasitism in the white rust pathogen of Arabidopsis thaliana. PLoS Biology, Vol.9 (No.7). Article No. e1001094 . doi:10.1371/journal.pbio.1001094

Khatabi, Behnam, Molitor, Alexandra, Lindermayr, Christian, Pfiffi, Stefanie, Durner, Jörg, Wettstein, Diter von, Kogel, Karl-Heinz and Schäfer, Patrick (2012) Ethylene supports colonization of plant roots by the mutualistic fungus Piriformospora indica. PLoS One, Volume 7 (Number 4). Article number e35502. doi:10.1371/journal.pone.0035502

Kiddle, Steven J., Windram, Oliver P., McHattie, Stuart, Mead, A. (Andrew), Beynon, Jim, Buchanan-Wollaston, Vicky, Denby, Katherine J. and Mukherjee, Sach (2009) Temporal clustering by affinity propagation reveals transcriptional modules in Arabidopsis thaliana. Bioinformatics, Vol.26 (No.3). pp. 355-362. doi:10.1093/bioinformatics/btp673

Kistler, Logan, Thakar, Heather B., VanDerwarker, Amber M., Domic, Alejandra, Bergström, Anders, George, Richard J., Harper, Thomas K., Allaby, Robin G., Hirth, Kenneth and Kennett, Douglas J. (2020) Archaeological Central American maize genomes suggest ancient gene flow from South America. Proceedings of the National Academy of Sciences of the United States of America, 117 (52). pp. 33124-33129. doi:10.1073/pnas.2015560117

Kitchen, James and Allaby, Robin G. (2012) The limits of mean-field heterozygosity estimates under spatial extension in simulated plant populations. PLoS ONE, Vol.7 (No.8). e43254. doi:10.1371/journal.pone.0043254

Kloosterman, Bjorn, De Koeyer, David, Griffiths, Rebecca, Flinn , Barry, Steuernagel, Burkhard, Scholz, Uwe, Sonnewald, Sophia, Sonnewald, Uwe, Bryan, Glenn J., Prat, Salome, Bánfalvi, Zsófia, Hammond, John P., Geigenberger, Peter, Nielsen, Kåre L., Visser, Richard G. F. and Bachem, Christian W. B. (2008) Genes driving potato tuber initiation and growth : identification based on transcriptional changes using the POCI array. Functional & Integrative Genomics, Vol.8 (No.4). pp. 329-340. doi:10.1007/s10142-008-0083-x

(2011) Comparative genomics yields insights into niche adaptation of plant vascular wilt pathogens. PLoS Pathogens, Vol.7 (No.7). doi:10.1371/journal.ppat.1002137

Knox, Kirsten, Wang, Pengwei, Kriechbaumer, Verena, Tilsner, Jens, Frigerio, Lorenzo, Sparkes, Imogen, Hawes, C. R. and Oparka, Karl J. (2015) Putting the squeeze on PDs : a role for RETICULONS in primary plasmodesmata formation. Plant Physiology, 168 (4). pp. 1563-1572. doi:10.1104/pp.15.00668

Koulintchenko, Milana, Vengrova, Sonya, Eydmann, Trevor, Arumugam, Prakash and Dalgaard, Jacob Z. (2012) DNA polymerase α (swi7) and the flap endonuclease fen1 (rad2) act together in the s-phase alkylation damage response in S. pombe. PLoS One, Vol.7 (No.10). e47091. doi:10.1371/journal.pone.0047091

Kowalska, Marta, Tian, Faming, Šmehilová, Mária, Galuszka, Petr, Frébort, Ivo, Napier, R. (Richard) and Dale, Nicholas (2011) Prussian Blue acts as a mediator in a reagentless cytokinin biosensor. Analytica Chimica Acta, Vol.701 (No.2). pp. 218-223. doi:10.1016/j.aca.2011.06.018

Kriechbaumer, Verena, Breeze, Emily, Pain, Charlotte, Tolmie, Frances, Frigerio, Lorenzo and Hawes, Chris (2018) Arabidopsis Lunapark proteins are involved in ER cisternae formation. New Phytologist, 219 (3). pp. 990-1004. doi:10.1111/nph.15228

Krishna, Ritesh V., Li, Chang-Tsun and Buchanan-Wollaston, Vicky (2010) A temporal precedence based clustering method for gene expression microarray data. BMC Bioinformatics, Vol.11 . Article 68. doi:10.1186/1471-2105-11-68

Kubes, Martin and Napier, Richard (2019) Non-canonical auxin signalling : fast and curious. Journal of Experimental Botany . doi:10.1093/jxb/erz111 (In Press)

Lagator, Mato, Vogwill, Tom, Mead, A. (Andrew), Colegrave, Nick and Neve, Paul (2013) Herbicide mixtures at high doses slow the evolution of resistance in experimentally evolving populations of Chlamydomonas reinhardtii. New Phytologist, Volume 198 (Number 3). pp. 938-945. doi:10.1111/nph.12195

Lagunas, Beatriz, Achom, Mingkee, Bonyadi-Pour, Roxanna, Pardal , Alonso Javier, Richmond, Bethany L., Sergaki, Chrysi, Vázquez, Saúl, Schäfer, Patrick, Ott, Sascha, Hammond, John and Gifford, Miriam L. (2019) Regulation of resource partitioning coordinates nitrogen and rhizobia responses and autoregulation of nodulation in the legume Medicago truncatula. Molecular Plant, 12 (6). pp. 833-846. doi:10.1016/j.molp.2019.03.014

Lagunas, Beatriz, Dodd, Ian C. and Gifford, Miriam L. (2019) A ‘nodemap’ to sustainable maize roots : linking nitrogen and water uptake improvements. Journal of Experimental Botany, 70 (19). pp. 5036-5039. doi:10.1093/jxb/erz315

Lai, Yan, Cuzick, Alayne, Lu, Xueqing Maggie, Wang, Jianqiang, Katiyar, Neerja, Tsuchiya, Tokuji, Le Roch, Karine, McDowell, John M., Holub, E. B. and Eulgem, Thomas (2019) The Arabidopsis RRM domain protein EDM3 mediates race-specific disease resistance by controlling H3K9me2-dependent alternative polyadenylation of RPP7 immune receptor transcripts. The Plant Journal, 97 (4). pp. 646-660. doi:10.1111/tpj.14148

Lai, Yan, Lu, Xueqing Maggie, Daron, Josquin, Pan, Songqin, Wang, Jianqiang, Wang, Wei, Tsuchiya, Tokuji, Holub, E. B., McDowell, John M., Slotkin, R. Keith, Le Roch, Karine G. and Eulgem, Thomas (2020) The Arabidopsis PHD-finger protein EDM2 has multiple roles in balancing NLR immune receptor gene expression. PLoS Genetics, 16 (9). e1008993. doi:10.1371/journal.pgen.1008993

Landoni, Beatrice, Viruel, Juan, Gómez, Rocio, Allaby, Robin G., Brennan, Adrian C., Picó, F. Xavier and Pérez‐Barrales, Rocio (2020) Microsatellite marker development in the crop wild relative Linum bienne using genome skimming. Applications in Plant Sciences, 8 (5). e11349. doi:10.1002/aps3.11349

Lavagi, Irene, Estelle, Mark, Weckwerth, Wolfram, Beynon, Jim and Bastow, Ruth (2012) From bench to bountiful harvests : a road map for the next decade of Arabidopsis research. The Plant Cell, Vol.24 (No.6). pp. 2240-2247. doi:10.1105/tpc.112.096982

Lee, Hannah, Ph.D., Sparkes, Imogen, Gattolin, Stefano, Dzimitrowicz, Natasha, Roberts, L. M. (Lynne M.), Hawes, C. R. and Frigerio, Lorenzo (2012) An Arabidopsis reticulon and the atlastin homologue RHD3-like2 act together in shaping the tubular endoplasmic reticulum. New Phytologist, Volume 197 (Number 2). pp. 481-489. doi:10.1111/nph.12038

Lee, Morgan, Dominguez-Ferreras, Anna, Kaliyadasa, Ewon, Huang, Wei-Jie, Antony, Edna, Stevenson, Tracey, Lehmann, Silke, Schäfer, Patrick, Knight, Marc R., Ntoukakis, Vardis and Knight, Heather (2021) Mediator subunits MED16, MED14, and MED2 are required for activation of ABRE-dependent transcription in Arabidopsis. Frontiers in Plant Science, 12 . 649720. doi:10.3389/fpls.2021.649720

Lee, Sarah C., Sundaram, Shanthy, Armitage, Lynne, Evans, John P., Hawkes, Tim, Kepinski, Stefan, Ferro, Noel and Napier, R. (Richard) (2014) Defining binding efficiency and specificity of auxins for SCFTIR1/AFB-Aux/IAA co-receptor complex formation. ACS Chemical Biology, Volume 9 (Number 3). pp. 673-682. doi:10.1021/cb400618m

(2010) Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Molecular Systems Biology, Vol.6 (No.397). doi:10.1038/msb.2010.53

Lehmann, Silke, Dominguez-Ferreras, Ana, Huang, Wei-Jie, Denby, Katherine J., Ntoukakis, Vardis and Schäfer, Patrick (2020) Novel markers for high-throughput protoplast-based analyses of phytohormone signaling. PLoS One, 15 (6). e0234154. doi:10.1371/journal.pone.0234154

Leonelli, Sabina, Smirnoff, N., Moore, Jonathan D., Cook, Charis and Bastow, Ruth (2013) Making open data work for plant scientists. Journal of Experimental Botany, Volume 64 (Number 14). pp. 4109-4117. doi:10.1093/jxb/ert273

Lepère, Cécile, Ostrowski, Martin, Hartmann, Manuela, Zubkov, Mikhail V. and Scanlan, David J. (2015) In situ associations between marine photosynthetic picoeukaryotes and potential parasites - a role for fungi? Environmental Microbiology Reports, 8 (4). pp. 445-451. doi:10.1111/1758-2229.12339

Li, Chunyang, Gu, Mei, Shi, Nongnong, Zhang, Hang, Yang, Xin, Osman, Toba, Liu, Yule, Wang, Huizhong, Vatish, Manu, Jackson, Stephen D. and Hong, Yiguo (2011) Mobile FT mRNA contributes to the systemic florigen signalling in floral induction. Scientific Reports, Vol.1 (No.73). pp. 1-7. doi:10.1038/srep00073

Li, Nannan, Zhao, Siming, Qiao, Dongling, Lin, Qinlu, Zhang, Binjia and Xie, Fengwei (2021) Multiscale structural disorganization of indica rice starch under microwave treatment with high water contents. ACS Food Science & Technology, 1 (1). pp. 45-53. doi:10.1021/acsfoodscitech.0c00080

Lin, Meiying, Shang, Xiaoqin, Liu, Peng, Xie, Fengwei, Chen, Xiaodong, Sun, Yongyi and Wan, Junyan (2016) Zinc chloride aqueous solution as a solvent for starch. Carbohydrate Polymers, 136 . pp. 266-273. doi:10.1016/j.carbpol.2015.09.007

Lin, Zhefeng, Hong, Yiguo , Yin, Mingan, Li, Chunyang, Zhang, Kefeng and Grierson, Donald (2008) A tomato HD-Zip homeobox protein, LeHB-1, plays an important role in floral organogenesis and ripening. Plant Journal, Volume 55 (Number 2). pp. 301-310. doi:10.1111/j.1365-313X.2008.03505.x

Linkies, Ada, Müller, Kerstin, Morris, Karl, Turečková, Veronika, Wenk, Meike, Cadman, Cassandra S. C., Corbineau, François, Strnad, Miroslav, Lynn, James R. , Finch-Savage, William E. and Leubner-Metzger, Gerhard (2009) Ethylene interacts with abscisic acid to regulate endosperm rupture during germination : a comparative approach using Lepidium sativum and Arabidopsis thaliana. Plant Cell, The, Vol.21 (No.12). pp. 3803-3822. doi:10.1105/tpc.109.070201

Littlejohn, George R., Mansfield, Jessica C., Christmas, Jacqueline T., Witterick, Eleanor, Fricker, Mark D., Grant, Murray, Smirnoff, N., Everson, Richard, Moger, Julian and Love, John (2014) An update : improvements in imaging perfluorocarbon-mounted plant leaves with implications for studies of plant pathology, physiology, development and cell biology. Frontiers in Plant Science, 5 . pp. 1-8. doi:10.3389/fpls.2014.00140

Liu, Yujie, Claydon, Rory, Polin, Marco and Brumley, Douglas R. (2018) Transitions in synchronization states of model cilia through basal-connection coupling. Journal of The Royal Society Interface, 15 (147). doi:10.1098/rsif.2018.0450

Lobelle, Delphine, Kenyon, Emma J., Cook, Kevan J. and Bull, James C. (2013) Local competition and metapopulation processes drive long-term seagrass-epiphyte population dynamics. PLoS One, Volume 8 (Number 2 ). Article no. e57072. doi:10.1371/journal.pone.0057072

Love, Andrew J., Milner-Gulland, Joel J. and Sadanandom, Ari (2009) Response to Cacas and Diamond: Is the autophagy machinery an executioner of programmed cell death in plants? Trends in Plant Science . doi:10.1016/j.tplants.2009.02.009

Love, Christopher G., Graham, Neil S. , Ó Lochlainn, Seosamh, Bowen, Helen C., May, Sean T., White, Philip J., Broadley, Martin R., Hammond, John P. and King , Graham J. (2010) A Brassica exon array for whole-transcript gene expression profiling. PL o S One, Vol.5 (No.9). doi:10.1371/journal.pone.0012812

Lozano, Jean-Claude, Schatt, Philippe, Botebol, Hugo, Verge, Valerie, Lesuisse, Emmanuel, Blain, Stephane, Carré, Isabelle A. and Bouget, Francois-Yves (2014) Efficient gene targeting and foreign DNA removal by homologous recombination in the picoeukaryote Ostreococcus. Plant Journal, Volume 78 (Number 6). pp. 1073-1083.

MacGregor-Chatwin, C., Jackson, P. J., Sener, M., Chidgey, J. W., Hitchcock, A., Qian, P., Mayneord, G. E., Johnson, M. P., Luthey-Schulten, Z., Dickman, M. J., Scanlan, David J. and Hunter, C. N. (2019) Membrane organization of photosystem I complexes in the most abundant phototroph on Earth. Nature Plants, 5 (8). pp. 879-889. doi:10.1038/s41477-019-0475-z

Marshall, Richard S., Jolliffe, Nicholas A., Ceriotti, Aldo, Snowden, Christopher J., Lord, Mike, Frigerio, Lorenzo and Roberts, L. M. (Lynne M.) (2009) The role of CDC48 in the retro-translocation of non-ubiquitinated toxin substrates in plant cells. Journal of Biological Chemistry, Vol.283 . pp. 15869-15877. doi:10.1074/jbc.M709316200

Mateyawa, S., Xie, Fengwei, Truss, Rowan W., Halley, Peter J., Nicholson, Timothy M., Shamshina, Julia L., Rogers, Robin D., Boehm, M. W. and McNally, Tony (2013) Effect of the ionic liquid 1-ethyl-3-methylimidazolium acetate on the phase transition of starch : dissolution or gelatinization? Carbohydrate Polymers, 94 (1). pp. 520-530. doi:10.1016/j.carbpol.2013.01.024

Matsoukas, Ioannis G. (2014) Attainment of reproductive competence, phase transition, and quantification of juvenility in mutant genetic screens. Frontiers in Plant Science, Volume 5 . Article number 32. doi:10.3389/fpls.2014.00032

Matsoukas, Ioannis G. (2017) Crosstalk between photoreceptor and sugar signaling modulates floral signal transduction. Frontiers in Physiology, 8 . 382. doi:10.3389/fphys.2017.00382

McLellan, Hazel, Boevink, Petra C., Armstrong, Miles R., Pritchard, Leighton, Gómez-Galera, Sonia, Morales, Juan, Whisson, Stephen C., Beynon, Jim and Birch, Paul R. J. (2013) An RxLR effector from phytophthora infestans prevents re-localisation of two plant NAC transcription factors from the endoplasmic reticulum to the nucleus. PLoS Pathogens, Volume 9 (Number 10). Article number e1003670. doi:10.1371/journal.ppat.1003670

McMullan, Mark, Gardiner, Anastasia, Bailey, Kate, Kemen, Eric, Ward, Ben J., Cevik, Volkan, Robert-Seilaniantz, Alexandre, Schultz-Larsen, Torsten, Balmuth, Alexi L., Holub, E. B., Oosterhout, Cock van and Jones, Jonathan D. G. (2015) Evidence for suppression of immunity as a driver for genomic introgressions and host range expansion in races of Albugo candida, a generalist parasite. eLife, 4 . pp. 1-24. e04550. doi:10.7554/eLife.04550

Meadows, John C. and Millar, Jonathan B. A. (2008) Latrunculin A delays anaphase onset in fission yeast by disrupting an ase1-independent pathway controlling mitotic spindle stability. Molecular Biology of the Cell, Vol.19 (No.9). pp. 3713-3723. doi:10.1091/mbc.E08-02-0164

Mersch, Dirk, Lee, Chong-Yong, Zhang, Jenny Zhenqi, Brinkert, Katharina, Fontecilla-Camps, Juan C., Rutherford, A. William and Reisner, Erwin (2015) Wiring of photosystem II to hydrogenase for photoelectrochemical water splitting. Journal of the American Chemical Society, 137 (26). pp. 8541-8549. doi:10.1021/jacs.5b03737

Mierek-Adamska, Agnieszka, Dąbrowskaa, Grażyna B. and Blindauer, Claudia A. (2018) The type 4 metallothionein from Brassica napus seeds folds in a metal-dependent fashion and favours zinc over other metals. Metallomics, 10 (10). pp. 1430-1443. doi:10.1039/C8MT00161H

Mitchell, Jack, Mukhtar, Nur K. and Bassel, George (2021) Low temperature stimulates spatial molecular reprogramming of the Arabidopsis seed germination programme. Seed Science Research, 30 (1). pp. 2-12. doi:10.1017/S0960258519000266

Monnier, Annabelle, Liverani, Silvia, Bouvet, Régis, Jesson, Béline, Smith, J. Q., Mosser, Jean, Corellou, Florence and Bouget, François-Yves (2010) Orchestrated transcription of biological processes in the marine picoeukaryote Ostreococcus exposed to light/dark cycles. BMC Genomics, Vol.11 (Article 192). doi:10.1186/1471-2164-11-192

Moore, Simon J., Lai, Hung-En, Chee, Soo-Mei, Toh, Ming, Coode, Seth, Chengan, Kameshwari, Capel, Patrick, Corre, Christophe, de los Santos, Emmanuel L. C. and Freemont, Paul S. (2021) A streptomyces venezuelae cell-free toolkit for synthetic biology. ACS Synthetic Biology, 10 (2). pp. 402-411. doi:10.1021/acssynbio.0c00581

(2012) Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche. Proceedings of the National Academy of Sciences of the United States of America, Vol.109 (No.43). pp. 17501-17506. doi:10.1073/pnas.1206847109

Morris, Karl, Barker, Guy C., Walley, Peter Glen, Lynn, James R. and Finch-Savage, William E. (2016) Trait to gene analysis reveals that allelic variation in three genes determines seed vigour. New Phytologist, 212 (4). pp. 964-976. doi:10.1111/nph.14102

Morris, Karl, Linkies, Ada, Müller, Kerstin, Oracz, Krystyn, Wang, Xiaofen, Lynn, James R. , Leubner-Metzger, Gerhard and Finch-Savage, William E. (2011) Regulation of seed germination in the close Arabidopsis relative Lepidium sativum : a global tissue-specific transcript analysis. Plant physiology, Vol.155 (No.4). pp. 1851-1870. doi:10.1104/pp.110.169706

Mushinski, Ryan , Payne, Zachary C., Raff, Jonathan D., Craig, Matthew E., Pusede, Sally E, Rusch, Douglas B., White, Jeffrey R. and Phillips, Richard P. (2021) Nitrogen cycling microbiomes are structured by plant mycorrhizal associations with consequences for nitrogen oxide fluxes in forests. Global Change Biology, 27 (5). pp. 1068-1082. doi:10.1111/gcb.15439

Mülleder, Michael, Calvani, Enrica, Alam, Mohammad T., Wang, Richard Kangda, Eckerstorfer, Florian, Zelezniak, Aleksej and Ralser, Markus (2016) Functional metabolomics describes the yeast biosynthetic regulome. Cell, 167 (2). 553-565.e12.

Müller, Christina A., Oberauner-Wappis, Lisa, Peyman, Armin, Amos, Gregory C. A., Wellington, E. M. H. and Berg, Gabriele (2015) Mining for nonribosomal peptide synthetase and polyketide synthase genes revealed a high level of diversity in the sphagnum bog metagenome. Applied and Environmental Microbiology, 81 (15). pp. 5064-5072. doi:10.1128/AEM.00631-15

Nakato, Gloria V., Studholme, David J., Blomme, Guy, Grant, Murray, Coutinho, Teresa A., Were, Evans M., Wicker, Emmanuel and Mahuku, George (2020) SNP‐based genotyping and whole‐genome sequencing reveal previously unknown genetic diversity in Xanthomonas vasicola pv. musacearum , causal agent of banana xanthomonas wilt, in its presumed Ethiopian origin. Plant Pathology . doi:10.1111/ppa.13308 (In Press)

Navaud, Olivier, Barbacci, Adelin, Taylor, Andrew, Clarkson, John P. and Raffaele, Sylvain (2018) Shifts in diversification rates and host jump frequencies shaped the diversity of host range among Sclerotiniaceae fungal plant pathogens. Molecular Ecology, 27 (5). pp. 1309-1323. doi:10.1111/mec.14523

Nguyen, Huy D., Tomitaka, Yasuhiro, Ho, Simon Y. W., Duchêne, Sebastián, Vetten, Heinrich-Josef, Lesemann, D.-E., Walsh, John A., Gibbs, Adrian J. and Ohshima, Kazusato (2013) Turnip mosaic potyvirus probably first spread to Eurasian brassica crops from wild orchids about 1000 years ago. PLoS One, Volume 8 (Number 2). Article no.e55336. doi:10.1371/journal.pone.0055336

Noble, Ralph, Blackburn, J., Thorp, G., Dobrovin-Pennington, Andreja, Pietravalle, S., Kerins, G., Allnutt, T. R. and Henry, C. M. (2011) Potential for eradication of the exotic plant pathogens Phytophthora kernoviae and Phytophthora ramorum during composting. Plant Pathology, Vol.60 (No.6). pp. 1077-1085. doi:10.1111/j.1365-3059.2011.02476.x

Nurika, Irnia, Eastwood, Daniel C., Bugg, Timothy D. H. and Barker, Guy C. (2020) Biochemical characterization of Serpula lacrymans iron-reductase enzymes in lignocellulose breakdown. Journal of Industrial Microbiology & Biotechnology, 47 (1). pp. 145-154. doi:10.1007/s10295-019-02238-7

Nurika, Irnia, Suhartini, Sri, Azizah, Nurul and Barker, Guy C. (2020) Extraction of vanillin following bioconversion of rice straw and its optimization by response surface methodology. Molecules, 25 (24). e6031. doi:10.3390/molecules25246031

Nutsugah, S. K., Twumasi, J. K., Chipili, J., Sere, Y. and Sreenivasaprasad, S. (2008) Diversity of the Rice Blast Pathogen Populations in Ghana and Strategies for Resistance Management. Plant Pathology Journal, Vol.7 (No.1). pp. 109-113. doi:10.3923/ppj.2008.109.113

Olin-Sandoval, Viridiana, Yu, Jason Shu Lim, Miller-Fleming, Leonor, Alam, Mohammad T., Kamrad, Stephan, Correia-Melo, Clara, Haas, Robert, Segal, Joanna, Peña Navarro, David Alejandro, Herrera-Dominguez, Lucia, Méndez-Lucio, Oscar, Vowinckel, Jakob, Mülleder, Michael and Ralser, Markus (2019) Lysine harvesting is an antioxidant strategy and triggers underground polyamine metabolism. Nature, 572 (7768). pp. 249-253. doi:10.1038/s41586-019-1442-6

Orosa, Beatriz, He, Qin, Mesmar, Joelle, Gilroy, Eleanor M., McLellan, Hazel, Yang, Chengwei, Craig, Adam, Bailey, Mark, Zhang, Cunjin, Moore, Jonathan D., Boevink, Petra C., Tian, Zhendong, Birch, Paul R. J. and Sadanandom, Ari (2017) BTB-BACK domain protein POB1 suppresses immune cell death by targeting ubiquitin E3 ligase PUB17 for degradation. PLoS Genetics, 13 (1). e1006540. doi:10.1371/journal.pgen.1006540

Palani, S., Chew, Ting Gang, Ramanujam, Srinivasan, Kamnev, Anton, Harne, Shrikant, Chapa y Lazo, Bernardo, Hogg, Rebecca, Sevugan, Mayalagu, Mishra, Mithilesh, Gayathri, Pananghat and Balasubramanian, Mohan K. (2017) Motor activity dependent and independent functions for Myosin II in cytokinesis contribute to actomyosin ring assembly and contraction in Schizosaccharomyces pombe. Current Biology, 27 (5). pp. 751-757. doi:10.1016/j.cub.2017.01.028

(2014) Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea. Genome Biology, Volume 15 (Number 6). Article number R77. doi:10.1186/gb-2014-15-6-r77

Parry, Geraint, Benitez-Alfonso, Yoselin, Gibbs, Daniel J., Grant, Murray, Harper, Andrea L., Harrison, C Jill, Kaiserli, Eirini, Leonelli, Sabina, May, Sean T., McKim, Sarah, Spoel, Steven, Turnbull, Colin, van der Hoorn, Renier A. L. and Murray, James (2020) How to build an effective research network : lessons from two decades of the GARNet plant science community. Journal of Experimental Botany, 71 (22). pp. 6881-6889. doi:10.1093/jxb/eraa397

Pařízková, Barbora, Žukauskaitė, Asta, Vain, Thomas, Grones, Peter, Raggi, Sara, Kubeš, Martin F., Kieffer, Martin, Doyle, Siamsa M., Strnad, Miroslav, Kepinski, Stefan, Napier, Richard, Doležal, Karel, Robert, Stéphanie and Novák, Ondřej (2021) New fluorescent auxin probes visualize tissue-specific and subcellular distributions of auxin in Arabidopsis. New Phytologist . doi:10.1111/nph.17183 (In Press)

Pearce, David A., Newsham, Kevin K., Thorne, Michael A. S., Calvo-Bado, Leo A., Krsek, Martin, Laskaris, Paris, Hodson, Andrew J. and Wellington, E. M. H. (2012) Metagenomic analysis of a southern maritime Antarctic soil. Frontiers in Microbiology, Volume 3 . Article number 403. doi:10.3389/fmicb.2012.00403

(2010) The scale of population structure in Arabidopsis thaliana. PLoS Genetics, Vol.6 (No.2). e1000843. doi:10.1371/journal.pgen.1000843

Privitera, Lucia, Hogg, Ellen L., Gaestel, Matthias, Wall, Mark J. and Corrêa, Sônia A. L. (2019) The MK2 cascade regulates mGluR-dependent synaptic plasticity and reversal learning. Neuropharmacology, 155 . pp. 121-130. doi:10.1016/j.neuropharm.2019.05.024

Qiang, X., Zechmann, B., Reitz, M. U., Kogel, Karl-Heinz and Schäfer, Patrick (2012) The mutualistic fungus Piriformospora indica colonizes Arabidopsis roots by inducing an endoplasmic reticulum stress-triggered caspase-dependent cell death. The Plant Cell, Volume 24 (Number 2). pp. 794-809. doi:10.1105/tpc.111.093260

Qin, Cheng, Shi, Nongnong, Gu, Mei, Zhang, Hang, Li, Bin, Shen, Jiajia, Mohammed, Atef, Ryabov, Eugene V., Li, Chunyang, Wang, Huizhong, Liu, Yule, Osman, Toba, Vatish, Manu and Hong, Yiguo (2012) Involvement of RDR6 in short-range intercellular RNA silencing in Nicotiana benthamiana. Scientific Reports, Vol.2 (No.467). doi:10.1038/srep00467

Quareshy, Mussa, Prusińska, Justyna, Kieffer, Martin, Fukui, Kosuke, Pardal , Alonso Javier, Lehmann, Silke, Schäfer, Patrick, Del Genio, Charo I., Kepinski, Stefan, Hayashi, Kenichiro, Marsh, Andrew and Napier, R. (Richard) (2018) The tetrazole analogue of the auxin indole-3-acetic acid binds preferentially to TIR1 and not AFB5. ACS Chemical Biology, 13 (9). pp. 2585-2594. doi:10.1021/acschembio.8b00527

Quettier, Anne-Laure and Eastmond, Peter J. (2009) Storage oil hydrolysis during early seedling growth. Plant Physiology and Biochemistry, Vol.47 (No.6). pp. 485-490. doi:10.1016/j.plaphy.2008.12.005

Ramazzotti, Matteo, Stefanini, Irene, Di Paola, Monica, De Filippo, Carlotta, Rizzetto, Lisa, Berná, Luisa, Dapporto, Leonardo, Rivero, Damariz, Tocci, Noemi, Weil, Tobias, Lenucci, Marcello S., Lionetti, Paolo and Cavalieri, Duccio (2019) Population genomics reveals evolution and variation of Saccharomyces cerevisiae in the human and insects gut. Environmental Microbiology, 21 (1). pp. 50-71. doi:10.1111/1462-2920.14422

Rashid, Goran M. M., Taylor, Charles R. (Charles Robert), Liu, Yangqingxu, Zhang, Xiaoyang, Rea, Dean, Fülöp, Vilmos and Bugg, Tim (2015) Identification of manganese superoxide dismutase from Sphingobacterium sp. T2 as a novel bacterial enzyme for lignin oxidation. ACS chemical biology, 10 (10). pp. 2286-2294. doi:10.1021/acschembio.5b00298

Rashid, Md. Harun Ar and Thomas, Brian (2020) Diurnal expression of Arabidopsis gene homologs during daylength-regulated bulb formation in onion (Allium cepa L.). Scientia Horticulturae, 261 . 108946. doi:10.1016/j.scienta.2019.108946

Raza, Shan-e-Ahmed, Prince, Gillian, Clarkson, John P. and Rajpoot, Nasir M. (2015) Automatic detection of diseased tomato plants using thermal and stereo visible light images. PLoS One, Volume 10 (Number 4). Article number e0123262. doi:10.1371/journal.pone.0123262

Reinhardt , Hagen , Hachez , Charles , Bienert, Manuela Désirée, Beebo , Azeez , Swarup , Kamal , Voss , Ute, Bouhidel , Karim , Frigerio, Lorenzo, Schjoerring, Jan K. , Bennett , Malcolm J. and Chaumont , Francois (2016) Tonoplast aquaporins facilitate lateral root emergence. Plant Physiology, 170 (3). pp. 1640-1654. 01635.2015. doi:10.1104/pp.15.01635

Ren, Fei, Wang, Jinwei, Xie, Fengwei, Zan, Ke, Wang, Shuo and Wang, Shujun (2020) Applications of ionic liquids in starch chemistry : a review. Green Chemistry, 22 (7). pp. 2162-2183. doi:10.1039/C9GC03738A

Ren, Fei, Xie, Fengwei, Luan, Huiyu, Wang, Shuo and Wang, Shujun (2020) Phase transition of maize starch in aqueous ionic liquids : effects of water:ionic liquid ratio and cation alkyl chain length. Industrial Crops and Products, 144 . 112043. doi:10.1016/j.indcrop.2019.112043

Retkute, Renata, Townsend, J., Murchie, Erik H., Jensen, Oliver E. and Preston, Simon P. (2018) Three-dimensional plant architecture and sunlit-shaded patterns : a stochastic model of light dynamics in canopies. Annals of Botany, 122 (2). pp. 291-302. doi:10.1093/aob/mcy067

Retzer, Katarzyna, Lacek, Jozef, Skokan, Roman, Del Genio, Charo I., Vosolsobě, Stanislav, Laňková, Martina, Malínská, Kateřina, Konstantinova, Nataliia, Zažímalová, Eva, Napier, R. (Richard), Petrášek, Jan and Luschnig, Christian (2017) Evolutionary conserved cysteines function as cis-acting regulators of Arabidopsis PIN-FORMED 2 distribution. International Journal of Molecular Sciences, 18 (11). 2274. doi:10.3390/ijms18112274

Rich-Griffin, Charlotte, Stechemesser, Annika, Finch, Jessica A., Lucas, Emma S., Ott, Sascha and Schäfer, Patrick (2019) Single-cell transcriptomics : a high-resolution avenue for plant functional genomics. Trends in Plant Science . doi:10.1016/j.tplants.2019.10.008

Riemer, Martin, Uzunova, Veselina, Riemer, Nastja, Clarkson, Guy J., Pereira, Nicole, Napier, R. (Richard) and Shipman, Michael (2018) Phyllostictine A : total synthesis, structural verification and determination of substructure responsible for plant growth inhibition. Chemical Communications, 54 (52). pp. 7211-7214. doi:10.1039/c8cc03349h

Rose, Laura E., Atwell, Susanna, Grant, Murray and Holub, E. B. (2012) Parallel loss-of-function at the RPM1 bacterial resistance locus in Arabidopsis thaliana. Frontiers in Plant Science, Volume 3 . Article number 287. doi:10.3389/fpls.2012.00287

Roy, Proyash, Achom, Mingkee, Wilkinson, Helen, Lagunas, Beatriz and Gifford, Miriam L. (2020) Symbiotic outcome modified by the diversification from 7 to over 700 nodule specific cysteine rich peptides. Genes, 11 (4). 348. doi:10.3390/genes11040348

Sadanandom, Ari and Napier, R. (Richard) (2010) Biosensors in plants. Current Opinion in Plant Biology, Vol.13 (No.6). pp. 736-743. doi:10.1016/j.pbi.2010.08.010

Salathia, Neeraj , Davis, Seth J., Lynn, James R. , Michaels, Scott D., Amasino, Richard M. and Millar, A. J. (Andrew J.) (2006) FLOWERING LOCUS C -dependent and -independent regulation of the circadian clock by the autonomous and vernalization pathways. BMC Plant Biology, Vol.6 (No.10). doi:10.1186/1471-2229-6-10

Salazar, Jose Domingo, Saithong, Treenut, Brown, Paul E., Foreman, Julia, Locke, James C. W., Halliday, Karen J., Carré, Isabelle A., Rand, D. A. (David A.) and Millar, A. J. (Andrew J.) (2009) Prediction of photoperiodic regulators from quantitative gene circuit models. Cell, Vol.139 (No.6). pp. 1170-1179. doi:10.1016/j.cell.2009.11.029

Sambles, Christine, Salmon, Deborah L., Florance, Hannah, Howard, Thomas P., Smirnoff, Nicholas, Nielsen, Lene R., McKinney, Lea V., Kjær, Erik D., Buggs, Richard J. A., Studholme, David J. and Grant, Murray R. (2017) Ash leaf metabolomes reveal differences between trees tolerant and susceptible to ash dieback disease. Scientific Data, 4 . 170190. doi:10.1038/sdata.2017.190

Sambles, Christine, Venkatesan, Lakshmipriya, Shittu, Olanrewaju M., Harrison, James, Moore, Karen, Tripathi, Leena, Grant, Murray R., Warmington, Rachel and Studholme, David J. (2020) Genome sequencing data for wild and cultivated bananas, plantains and abacá. Data in Brief, 33 . 106341. doi:10.1016/j.dib.2020.106341

Schausberger, Christina, Roach, Thomas, Stöggl, Wolfgang, Arc, Erwann, Finch-Savage, William E. and Kranner, Ilse (2019) Abscisic acid-determined seed vigour differences do not influence redox regulation during ageing. Biochemical Journal, 476 (6). pp. 965-974. doi:10.1042/BCJ20180903

Seymour, G. B. (Graham B.), Ryder, Carol D., Cevik, Volkan, Hammond, John P., Popovich, Alexandra, King , Graham J., Vrebalov, Julia, Giovannoni, James J. and Manning, Kenneth (2010) A SEPALLATA gene is involved in the development and ripening of strawberry (Fragaria xananassa Duch.) fruit, a non-climacteric tissue. Journal of Experimental Botany, Vol.63 (No.2). 1179-1188 . doi:10.1093/jxb/erq360

Sgamma, Tiziana, Jackson, Alison C., Muleo, Rosario, Thomas, Brian and Massiah, Andrea J. (2014) TEMPRANILLO is a regulator of juvenility in plants. Scientific Reports, Volume 4 . Article number 3704. doi:10.1038/srep03704

Sgamma, Tiziana, Pape, Judith, Massiah, Andrea J. and Jackson, Stephen D. (2016) Selection of reference genes for diurnal and developmental time-course real-time PCR expression analyses in lettuce. Plant Methods, 12 (1). pp. 1-9. doi:10.1186/s13007-016-0121-y

Shi, Xiao Li, Lepère, Cécile, Scanlan, David J. and Vaulot, Daniel (2011) Plastid 16S rRNA gene diversity among eukaryotic picophytoplankton sorted by flow cytometry from the South Pacific Ocean. PL o S One, Vol.6 (No.4). e18979 . doi:10.1371/journal.pone.0018979

Shi, Xiao Li, Marie, D., Jardillier, Ludwig, Scanlan, David J. and Vaulot, Daniel (2009) Groups without cultured representatives dominate eukaryotic picophytoplankton in the oligotrophic South East Pacific Ocean. PLoS One, Vol.4 (No.10). Article No. e7657. doi:10.1371/journal.pone.0007657

Sidaway-Lee, Kate, Costa, Maria J. (Maria João), Rand, D. A. (David A.), Finkenstädt, Bärbel and Penfield, Steven (2014) Direct measurement of transcription rates reveals multiple mechanisms for configuration of the Arabidopsis ambient temperature response. Genome Biology, Volume 15 (Number 3). Article number R45. doi:10.1186/gb-2014-15-3-r45

Simmons, Thomas J., Mortimer, Jenny C., Bernardinelli, Oigres D., Pöppler, Ann Christin, Brown, Steven P., de Azevedo, Eduardo R, Dupree, Ray and Dupree, Paul (2016) Folding of xylan onto cellulose fibrils in plant cell walls revealed by solid-state NMR. Nature Communications, 7 . 13902 . doi:10.1038/ncomms13902

Singh, Gaurav, Retzer, Katarzyna, Vosolsobě, Stanislav and Napier, R. (Richard) (2018) Advances in understanding the mechanism of action of the auxin permease AUX1. International Journal of Molecular Sciences, 19 (11). 3391. doi:10.3390/ijms19113391

Six, Christophe, Thomas, Jean-Claude , Garczarek, Laurence, Ostrowski, Martin, Dufresne, Alexis, Blot, Nicolas, Scanlan, David J. and Partensky, Frédéric (2007) Diversity and evolution of phycobilisomes in marine Synechococcus spp.: a comparative genomics study. Genome Biology, Vol.8 (No.12). doi:10.1186/gb-2007-8-12-r259

Skalicky, V., Kubes, M., Napier, R. and Novak, O. (2018) Auxins and cytokinins : the role of subcellular organization on homeostasis. International Journal of Molecular Sciences, 19 (10). 3115. doi:10.3390/ijms19103115

Smith, Alastair, Rihtman, Branko, Stirrup, Rachel, Silvano, Eleonora, Mausz, Michaela A., Scanlan, David J. and Chen, Yin (2019) Elucidation of glutamine lipid biosynthesis in marine bacteria reveals its importance under phosphorus deplete growth in Rhodobacteraceae. The ISME Journal, 13 . pp. 39-49. doi:10.1038/s41396-018-0249-z

Spadafora, Natasha, Parfitt, David, Marchbank, Angela, Li, Sherong, Bruno, Leonardo, Vaughan, Rhys, Nieuwland, Jeroen, Buchanan-Wollaston, Vicky, Herbert, Robert, Bitonti, Maria Beatrice, Doonan, John, Albani, Diego, Prinsen, Els, Francis, D. (Dennis) and Rogers, Hilary (2012) Perturbation of cytokinin and ethylene-signalling pathways explain the strong rooting phenotype exhibited by Arabidopsis expressing the Schizosaccharomyces pombe mitotic inducer, cdc25. BMC Plant Biology, Vol.12 (No.1). p. 45. doi:10.1186/1471-2229-12-45

Spence, Edward M., Calvo-Bado, Leonides, Mines, Paul and Bugg, Timothy D. H. (2021) Metabolic engineering of Rhodococcus jostii RHA1 for production of pyridine-dicarboxylic acids from lignin. Microbial Cell Factories, 20 (1). 15. doi:10.1186/s12934-020-01504-z

Spence, Edward M., Scott, Heather T., Dumond, Louison, Calvo-Bado, Leo A., Monaco, Sabrina di, Williamson, James J., Persinoti, Gabriela F., Squina, Fabio M. and Bugg, Timothy D. H. (2020) Characterisation of the hydroxyquinol degradation pathway in Rhodococcus jostii RHA1 and Agrobacterium sp. : an alternative pathway for degradation of protocatechuic acid and lignin degradation fragments. Applied and Environmental Microbiology . doi:10.1128/AEM.01561-20 (In Press)

Srivastava, Anjil Kumar, Orosa, Beatriz, Singh, Prashant, Cummins, Ian, Walsh, Charlotte, Zhang, Cunjin, Grant, Murray R., Roberts, Michael R., Anand, Ganesh Srinivasan, Fitches, Elaine and Sadanandom, Ari (2018) SUMO suppresses the activity of the jasmonic acid receptor CORONATINE INSENSITIVE1. The Plant Cell, 30 (9). pp. 2099-2115. doi:10.1105/tpc.18.00036

Stefanini, Irene, Albanese, Davide, Sordo, Maddalena, Legras, Jean-Luc, De Filippo, Carlotta, Cavalieri, Duccio and Donati, Claudio (2017) SaccharomycesIDentifier, SID : strain-level analysis of Saccharomyces cerevisiae populations by using microsatellite meta-patterns. Scientific Reports, 7 (1). 15343. doi:10.1038/s41598-017-15729-3

Studholme, David J., Harris, Beverley, Le Cocq, Kate, Winsbury, Rebecca, Perera, Venura, Ryder, Lauren, Ward, Jane L., Beale, Michael H., Thornton, Chris R. and Grant, Murray (2013) Investigating the beneficial traits of Trichoderma hamatum GD12 for sustainable agriculture : insights from genomics. Frontiers in Plant Science, 4 . pp. 1-13. doi:10.3389/fpls.2013.00258

Studholme, David J., McDougal, R. L., Sambles, Christine, Hansen, Everett, Hardy, Giles, Grant, Murray R., Ganley, R. J. and Williams, N. M. (2016) Genome sequences of six Phytophthora species associated with forests in New Zealand. Genomics Data , 7 . pp. 54-56. doi:10.1016/j.gdata.2015.11.015

Studholme, David J., Panda, Preeti, Sanfuentes Von Stowasser, Eugenio, González, Mariela, Hill, Rowena, Sambles, Christine, Grant, Murray R., Williams, Nari M. and McDougal, Rebecca L. (2019) Genome sequencing of oomycete isolates from Chile supports the New Zealand origin of Phytophthora kernoviae and makes available the first Nothophytophthora sp. genome. Molecular Plant Pathology, 20 (3). pp. 423-431. doi:10.1111/mpp.12765

Suberu, John O., Romero-Canelón, Isolda, Sullivan, Neil F., Lapkin, Alexei and Barker, Guy C. (2014) Comparative cytotoxicity of artemisinin and cisplatin and their interactions with chlorogenic acids in MCF7 breast cancer cells. ChemMedChem, Volume 9 (Number 12). pp. 2791-2797. doi:10.1002/cmdc.201402285

Taylor, Andrew, Armitage, Andrew D., Handy, Claire, Jackson, Alison C., Hulin, Michelle T., Harrison, Richard J. and Clarkson, John P. (2019) Basal rot of narcissus : understanding pathogenicity in fusarium oxysporum f. sp. narcissi. Frontiers in Microbiology, 10 . 2905. doi:10.3389/fmicb.2019.02905

Taylor, Andrew, Coventry, Emma, Handy, Claire, West, Jon S., Young, Caroline S. and Clarkson, John P. (2018) Inoculum potential of Sclerotinia sclerotiorum sclerotia depends on isolate and host plant. Plant Pathology, 67 (6). pp. 1286-1295. doi:10.1111/ppa.12843

Taylor, Andrew, Massiah, Andrea J. and Thomas, Brian (2010) Conservation of Arabidopsis thaliana photoperiodic flowering time genes in onion (Allium cepa L.). Plant and Cell Physiology, Vol.51 (No.10). pp. 1627-1637. doi:10.1093/pcp/pcq120

Taylor, Andrew, Rana, Kusum, Handy, Claire and Clarkson, John P. (2018) Resistance to Sclerotinia sclerotiorum in wild Brassica species and the importance of Sclerotinia subarctica as a Brassica pathogen. Plant Pathology, 67 (2). pp. 433-444. doi:10.1111/ppa.12745

Taylor, Andrew, Teakle, Graham R., Walley, Peter G., Finch-Savage, William E., Jackson, Alison C., Jones, Julie, Hand, Paul, Thomas, Brian, Havey, Michael J., Pink, David A. C. and Clarkson, John P. (2019) Assembly and characterisation of a unique onion diversity set identifies resistance to Fusarium basal rot and improved seedling vigour. Theoretical and Applied Genetics, 132 (12). pp. 3245-3264. doi:10.1007/s00122-019-03422-0

Taylor, Andrew, Vágány, Viktória, Jackson, Alison C., Harrison, Richard J., Rainoni, Alessandro and Clarkson, John P. (2016) Identification of pathogenicity-related genes in Fusarium oxysporum f. sp. cepae. Molecular Plant Pathology, 17 (7). pp. 1032-1047. doi:10.1111/mpp.12346

Taylor, Jemma L., Massiah, Andrea J., Kennedy, Sue, Hong, Yiguo and Jackson, Stephen D. (2017) FLC expression is down-regulated by cold treatment in Diplotaxis tenuifolia (wild rocket), but flowering time is unaffected. Journal of Plant Physiology, 214 . pp. 7-15. doi:10.1016/j.jplph.2017.03.015

Thamm, Anna, Saunders, Timothy E. and Dolan, Liam (2020) MpFEW RHIZOIDS1 miRNA-mediated lateral inhibition controls rhizoid cell patterning in Marchantia polymorpha. Current Biology, 30 (10). 1905-1915.e4. doi:10.1016/j.cub.2020.03.032

Theisen, Ulrike, Straube, Anne and Steinberg, Gero (2008) Dynamic rearrangement of nucleoporins during fungal "open" mitosis. Molecular Biology of the Cell, Volume 19 (Number 3). pp. 1230-1240. doi:10.1091/mbc.E07-02-0130

Tian, Faming, Greplová, Marta, Frébort, Ivo, Dale, Nicholas and Napier, R. (Richard) (2014) A highly selective biosensor with nanomolar sensitivity based on cytokinin dehydrogenase. PLoS One, Volume 9 (Number 3). Article number e90877. doi:10.1371/journal.pone.0090877

Tolley, Nicholas, Sparkes, Imogen, Craddock, Christian P., Eastmond, Peter J., Runions, John, Hawes, C. R. and Frigerio, Lorenzo (2010) Transmembrane domain length is responsible for the ability of a plant reticulon to shape endoplasmic reticulum tubules in vivo. Plant Journal, Volume 64 (Number 3). pp. 411-418. doi:10.1111/j.1365-313X.2010.04337.x

Torres Zabala, Marta de, Zhai, Bing, Jayaraman, Siddharth, Eleftheriadou, Garoufalia, Winsbury, Rebecca, Yang, Ron, Truman, William, Tang, Saijung, Smirnoff, N. and Grant, Murray R. (2016) Novel JAZ co-operativity and unexpected JA dynamics underpin Arabidopsis defence responses to Pseudomonas syringae infection. New Phytologist, 209 (3). pp. 1120-1134. doi:10.1111/nph.13683

Traka, Maria H., Saha, Shikha, Huseby, Stine, Kopriva, Stanislav, Walley, Peter Glen, Barker, Guy C., Moore, Jonathan D., Mero, Gene, van den Bosch, Frans, Constant, Howard, Kelly, Leo, Schepers, Hans, Boddupalli, Sekhar and Mithen, Richard F. (2013) Genetic regulation of glucoraphanin accumulation in Beneforté® broccoli. New Phytologist, Volume 198 (Number 4). pp. 1085-1095. doi:10.1111/nph.12232

Trinder, Sarah A., Askew, Andrew P. and Whitlock, Raj (2020) Climate‐driven evolutionary change in reproductive and early‐acting life‐history traits in the perennial grass Festuca ovina. Journal of Ecology, 108 (4). pp. 1398-1410. doi:10.1111/1365-2745.13304

Uzunova, Veselina V., Quareshy, Mussa, Del Genio, Charo I. and Napier, R. (Richard) (2016) Tomographic docking suggests the mechanism of auxin receptor TIR1 selectivity. Open Biology, 6 (10). 160139. doi:10.1098/rsob.160139

Vale, Glyn A., Hargrove, John W., Solano, Philippe, Courtin, Fabrice, Rayaisse, Jean-Baptiste, Lehane, M. J., Esterhuizen, Johan, Tirados, Inaki and Torr, Stephen J. (2014) Explaining the host-finding behavior of blood-sucking insects : computerized simulation of the effects of habitat geometry on tsetse fly movement. PLoS Neglected Tropical Diseases, Volume 8 (Number 6). Article number e2901. doi:10.1371/journal.pntd.0002901

Vicente, Joana G., Gunn, Nick, Bailey, Liz, Pink, David and Holub, E. B. (2012) Genetics of resistance to downy mildew in Brassica oleracea and breeding towards durable disease control for UK vegetable production. Plant Pathology, Vol.61 (No.3). pp. 600-609. doi:10.1111/j.1365-3059.2011.02539.x

Vicente, Joana G. and Holub, E. B. (2013) Xanthomonas campestris pv. campestris (cause of black rot of crucifers) in the genomic era is still a worldwide threat to brassica crops. Molecular Plant Pathology, Vol.14 (No.1). pp. 2-18. doi:10.1111/j.1364-3703.2012.00833.x

Wagstaff, Carol, Bramke, Irene, Breeze, Emily, Thornber, Sarah Elizabeth, Harrison, Elizabeth, Thomas, Brian, Buchanan-Wollaston, Vicky, Stead, Tony and Rogers, Hilary (2010) A specific group of genes respond to cold dehydration stress in cut Alstroemeria flowers whereas ambient dehydration stress accelerates developmental senescence expression patterns. Journal of Experimental Botany, Vol.61 (No.11). pp. 2905-2921. doi:10.1093/jxb/erq113

Walker, Liam, Boddington, Clare, Jenkins, Dafyd J., Wang, Ying, Gronlund, Jesper T., Hulsmans, J., Kumar, Sanjeev, Patel, Dhaval, Moore, Jonathan D., Carter, Anthony, Samavedam, Siva, Bonomo, Giovanni, Hersh, David S., Coruzzi, Gloria‏, Burroughs, Nigel John and Gifford, Miriam L. (2017) Changes in gene expression in space and time orchestrate environmentally mediated shaping of root architecture. The Plant Cell, 29 (10). pp. 2393-2412. doi:10.1105/tpc.16.00961

Walley, Peter Glen, Carder, John, Skipper, Emma, Mathas, Evy, Lynn, James R. , Pink, David and Buchanan-Wollaston, Vicky (2012) A new broccoli × broccoli immortal mapping population and framework genetic map: tools for breeders and complex trait analysis. Theoretical and Applied Genetics, Volume 124 (Number 3). pp. 467-484. doi:10.1007/s00122-011-1721-6

Wang, Yanfei, Yu, Long, Sun, Qingjie and Xie, Fengwei (2021) Hydroxypropyl methylcellulose and hydroxypropyl starch : rheological and gelation effects on the phase structure of their mixed hydrocolloid system. Food Hydrocolloids, 115 . 106598. doi:10.1016/j.foodhyd.2021.106598

Wang, Ying, Penfold, Christopher A., Hodgson, D. A., Gifford, Miriam L. and Burroughs, Nigel John (2014) Correcting for link loss in causal network inference caused by regulator interference. Bioinformatics, Volume 30 (Number 19). pp. 2779-2786. doi:10.1093/bioinformatics/btu388

Wang, Yue, Li, Ping-Yi, Zhang, Yi, Cao, Hai-Yan, Wang, Yan-Jun, Li, Chun-Yang, Wang, Peng, Su, Hai-Nan, Chen, Yin, Chen, Xiu-Lan and Zhang, Yu-Zhong (2020) 3,6-Anhydro-L-Galactose Dehydrogenase VvAHGD is a member of a new aldehyde dehydrogenase family and catalyzes by a novel mechanism with conformational switch of two catalytic residues Cysteine 282 and Glutamate 248. Journal of Molecular Biology, 432 (7). pp. 2186-2203. doi:10.1016/j.jmb.2020.02.008

Warmington, Rachel and Clarkson, John P. (2016) Volatiles from biofumigant plants have a direct effect on carpogenic germination of sclerotia and mycelial growth of Sclerotinia sclerotiorum. Plant and Soil, 401 (1). pp. 213-229. doi:10.1007/s11104-015-2742-8

Waterworth, W. M., Footitt, S., Bray, C. M., Finch-Savage, William E. and West, C. E. (2016) DNA damage checkpoint kinase ATM regulates germination and maintains genome stability in seeds. Proceedings of the National Academy of Sciences of the United States of America, 113 (34). pp. 9647-9652. doi:10.1073/pnas.1608829113

Watkinson, Sarah C., Boddy, Lynne, Burton, Kerry S., Darrah, P. R., Eastwood, Daniel C., Fricker, Mark D. and Tlalka, Monika (2005) New approaches to investigating the function of mycelial networks. Mycologist, Vol.19 (No.1). pp. 11-17. doi:10.1017/S0269915X05001023

Weis, Corina, Huckelhoven, Ralph and Eichmann, Ruth (2013) LIFEGUARD proteins support plant colonization by biotrophic powdery mildew fungi. Journal of Experimental Botany, Volume 64 (Number 12). pp. 3855-3867. doi:10.1093/jxb/ert217

Weynberg, Karen Dawn, Allen, Michael J., Gilg, Ilana C., Scanlan, David J. and Wilson, William H. (2011) Genome sequence of Ostreococcus tauri virus OtV-2 enlightens the role of picoeukaryote niche separation in the ocean. Journal of Virology, Vol.85 (No.9). pp. 4520-4529. doi:10.1128/JVI.02131-10

Whiteford, Rory, Nurika, Irnia, Schiller, Tara L. and Barker, Guy C. (2021) The white-rot fungus, Phanerochaete chrysosporium, under combinatorial stress produces variable oil profiles following analysis of secondary metabolites. Journal of Applied Microbiology . doi:10.1111/jam.15013 (In Press)

Wibowo, Anjar, Becker, Claude, Durr, Julius, Price, Jonathan, Spaepen, Stijn, Hilton, Sally, Putra, Hadi, Papareddy, Ranjith, Saintain, Quentin, Harvey, Sarah, Bending, G. D., Schulze-Lefert, Paul, Weigel, Detlef and Gutierrez-Marcos, José F. (2018) Partial maintenance of organ-specific epigenetic marks during plant asexual reproduction leads to heritable phenotypic variation. Proceedings of the National Academy of Sciences of the United States of America, 115 (39). E9145-E9152. doi:10.1073/pnas.1805371115

Wibowo, Anjar, Becker, Claude, Marconi, Gianpiero, Durr, Julius, Price, Jonathan, Hagmann, Jorg, Papareddy, Ranjith, Putra, Hadi, Kageyama, Jorge, Becker, Jorg, Weigel, Detlef and Gutierrez-Marcos, José F. (2016) Hyperosmotic stress memory in Arabidopsis is mediated by distinct epigenetically labile sites in the genome and is restricted in the male germline by DNA glycosylase activity. eLife, 5 . e13546. doi:10.7554/eLife.13546

(2012) Arabidopsis defense against Botrytis cinerea : chronology and regulation deciphered by high-resolution temporal transcriptomic analysis. The Plant Cell, Vol.24 (No.9). pp. 3530-3557. doi:10.1105/tpc.112.102046

(2020) Accurate and versatile 3D segmentation of plant tissues at cellular resolution. eLife, 9 . e57613. doi:10.7554/elife.57613

Woods-Tör, Alison, Studholme, David J., Cevik, Volkan, Telli, Osman, Holub, E. B. and Tör, Mahmut (2018) A suppressor/avirulence gene combination in Hyaloperonospora arabidopsidis determines race specificity in Arabidopsis thaliana. Frontiers in Plant Science, 9 . 265. doi:10.3389/fpls.2018.00265

Woolhead, Cheryl A., Thompson, Simon J., Moore, Misty, Tissier, Christophe, Mant, Alexandra, Rodger, Alison, Henry, Ralph and Robinson, Colin (2001) Distinct albino3-dependent and -independent pathways for thylakoid membrane protein insertion. Journal of Biological Chemistry, Vol.276 (No.44). pp. 40841-40846. doi:10.1074/jbc.M106523200

Woolley, Victoria C., Teakle, Graham R., Prince, Gillian, de Moor, C. H. and Chandler, Dave (2020) Cordycepin, a metabolite of Cordyceps militaris, reduces immune-related gene expression in insects. Journal of Invertebrate Pathology . 107480. doi:10.1016/j.jip.2020.107480 (In Press)

Xu, Fang, Zhu, Chipan, Cevik, Volkan, Johnson, Kaeli, Liu, Yanan, Sohn, Kee-Hoon, Jones, Jonathan D. G., Holub, E. B. and Li, Xin (2015) Autoimmunity conferred by chs3-2D relies on CSA1, its adjacent TIR-NB-LRR encoding neighbour. Scientific Reports, 5 . pp. 1-7. 8792. doi:10.1038/srep08792

Xu, Hao, Lantzouni, Ourania, Bruggink, Tonko, Benjamins, Rene, Lanfermeijer, Frank, Denby, Katherine J., Schwechheimer, Claus and Bassel, George (2020) A molecular signal integration network underpinning Arabidopsis seed germination. Current Biology, 30 (19). pp. 3703-3712. doi:10.1016/j.cub.2020.07.012

Xu, Jinchuan, Chen, Ling, Guo, Xinbo, Liang, Yi and Xie, Fengwei (2020) Understanding the multi-scale structure and digestibility of different waxy maize starches. International Journal of Biological Macromolecules, 144 . pp. 252-258. doi:10.1016/j.ijbiomac.2019.12.110

Yang, Jing, Penfold, Christopher A., Grant, Murray R. and Rattray, Magnus (2016) Inferring the perturbation time from biological time course data. Bioinformatics, 32 (19). pp. 2956-2964. doi:10.1093/bioinformatics/btw329

Yemataw, Zerihun, Chala, Alemayehu, Ambachew, Daniel, Studholme, David J., Grant, Murray R. and Tesfaye, Kassahun (2017) Morphological variation and inter-relationships of quantitative traits in enset (Ensete ventricosum (welw.) Cheesman) germplasm from South and South-Western Ethiopia. Plants, 6 (4). 56. doi:10.3390/plants6040056

Yemataw, Zerihun, Muzemil, Sadik, Ambachew, Daniel, Tripathi, Leena, Tesfaye, Kassahun, Chala, Alemayheu, Farbos, Audrey, O’Neill, Paul, Moore, Karen, Grant, Murray R. and Studholme, David J. (2018) Genome sequence data from 17 accessions of Ensete ventricosum, a staple food crop for millions in Ethiopia. Data in Brief, 18 . pp. 285-293. doi:10.1016/j.dib.2018.03.026

Yu, Zhiming, Chen, Qiyuan, Chen, Weiwei, Zhang, Xian, Mei, Fengling, Zhang, Pengcheng, Zhao, Mei, Wang, Xiaohong, Shi, Nongnong, Jackson, Stephen D. and Hong, Yiguo (2018) Multigene editing via CRISPR/Cas9 guided by a single-sgRNA seed in Arabidopsis. Journal of Integrative Plant Biology, 60 (5). pp. 376-381. doi:10.1111/jipb.12622

Zatulovskiy, Evgeny, Tyson, Richard A. (Richard Anthony), Bretschneider, Till and Kay, Robert R. (2014) Bleb-driven chemotaxis of Dictyostelium cells. The Journal of Cell Biology, 204 (6). pp. 1027-1044. doi:10.1083/jcb.201306147

Zhang, Kefeng and Burns, Ian G. (2008) Derivation of a dynamic model of the kinetics of nitrogen uptake throughout the growth of lettuce : calibration and validation. Journal of Plant Nutrition, Vol.31 (No.8). pp. 1440-1460. doi:10.1080/01904160802208345

Zhang, Yi, Nikolovski, Nino, Sorieul, Mathias, Vellosillo, Tamara, McFarlane, Heather E., Dupree, Ray, Kesten, Christopher, Schneider, René, Driemeier, Carlos, Lathe, Rahul, Lampugnani, Edwin, Yu, Xiaolan, Ivakov, Alexander, Doblin, Monika S., Mortimer, Jenny C., Brown, Steven P., Persson, Staffan and Dupree, Paul (2016) Golgi-localized STELLO proteins regulate the assembly and trafficking of cellulose synthase complexes in Arabidopsis. Nature Communications, 7 . 11656. doi:10.1038/ncomms11656

Zhou, Yu , Ryabov, Eugene V., Zhang, Xuemei and Hong, Yiguo (2008) Influence of viral genes on the cell-to-cell spread of RNA silencing. Journal of Experimental Botany, Vol.59 (No.10). pp. 2803-2813. doi:10.1093/jxb/ern141

da Silva Santos, Paulo H., Manechini, João R. Vieira, Brito, Michael S., Romanel, Elisson, Vicentini, Renato, Scarpari, Maximiliano, Jackson, Stephen D. and Pinto, Luciana R. (2021) Selection and validation of reference genes by RT-qPCR under photoperiodic induction of flowering in sugarcane ( Saccharum spp.). Scientific Reports, 11 (1). 4589. doi:10.1038/s41598-021-83918-2

de Mattos-Shipley, K. M. J., Ford, K. L., Alberti, Fabrizio, Banks, A. M., Bailey, A. M. and Foster, G. D. (2016) The good, the bad and the tasty : the many roles of mushrooms. Studies in Mycology, 85 . pp. 125-157. doi:10.1016/j.simyco.2016.11.002

de Souza‐Guerreiro, Tailise Carolina , Meng, Xiang, Dacheux, Estelle, Firczuk, Helena and McCarthy, John E. G. (2020) Translational control of gene expression noise and its relationship to ageing in yeast. The FEBS Journal . doi:10.1111/febs.15594 (In Press)

Ó Lochlainn, Seosamh, Bowen, Helen C., Fray, R. G. , Hammond, John P., King, Graham J., White, Philip J., Graham, Neil S. and Broadley, Martin R. (2011) Tandem quadruplication of HMA4 in the zinc (Zn) and cadmium (Cd) hyperaccumulator noccaea caerulescens. PL o S One, Vol.6 (No.3). e17814. doi:10.1371/journal.pone.0017814

Book Item

Ghaffari, Reza, Zhang, Fu, Iliescu, Daciana, Hines, Evor, Leeson, Mark S. and Napier, R. (2011) The analysis of plant's organic volatiles compounds with electronic nose and pattern recognition techniques. In: Qahwaji, Rami, 1972- and Green, Roger, 1951- and Hines, Evor, 1957-, (eds.) Applied signal and image processing : multidisciplinary advancements. Hershey, PA: IGI Global, pp. 115-126. ISBN 9781609604776

Conference Item

Jafarnejadsani, Hamidreza, Kim, Jongmin, Hovakimyan, Naira and Kulkarni, Vishwesh V. (2016) Load capacity improvements in transcriptional systems using discrete-time L1-adaptive control. In: 8th International Workshop on Bio-Design Automation, Newcastle-upon-Tyne, UK, 16-18 Aug 2016. Published in: Proceedings of 8th International Workshop on Bio-Design Automation pp. 75-76.

Lessire, R., Cahoon, E., Chapman, K., Dyer, J., Eastmond, Peter J. and Heinz, E. (2009) Highlights of recent progress in plant lipid research. In: 18th Biennial International Symposium on Plant Lipids (ISPL), Bordeaux, France, 20-25 Jul 2008. Published in: Plant Physiology and Biochemistry, Vol.47 (No.6). pp. 443-447. ISSN 0981-9428. doi:10.1016/j.plaphy.2009.02.010

Matsoukas, Ioannis G., Thomas, Brian and Massiah, Andrea J. (2005) Μοριακή και φυσιολογική ανάλυση της άνθισης. In: 22ο Πανελλήνιο Συνέδριο Ελληνικής Εταιρείας Επιστήµης Οπωροκηπευτικών, Πάτρα, Ἑλλάς-Greece, 19-21 October 2005 doi:10.1029/2004JC002566

Journal Item

Bruce, Gareth, Gu, Mei, Shi, Nongnong, Liu, Yule and Hong, Yiguo (2011) Influence of retinoblastoma-related gene silencing on the initiation of DNA replication by African cassava mosaic virus Rep in cells of mature leaves in Nicotiana benthamiana plants. Virology Journal, Vol.8 (No.1). p. 561. doi:10.1186/1743-422X-8-561

Costa, Liliana M. and Gutierrez-Marcos, José F. (2008) Retinoblastoma makes its mark on imprinting in plants. Plos Biology, Vol.6 (No.8). pp. 1631-1633. doi:10.1371/journal.pbio.0060212

Habershon, Scott and Baker, Lewis A. (2017) Photosynthetic pigment-protein complexes as highly-connected networks : implications for robust energy transport. Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences, 473 (2201). doi:10.1098/rspa.2017.0112

Retzer, Katarzyna, Singh, Gaurav and Napier, R. (Richard) (2018) It starts with TIRs. Nature Plants, 4 (7). pp. 410-411. doi:10.1038/s41477-018-0196-8

Thesis or Dissertation

Abbott, Aaron (2010) The isolation of flowering time genes from lettuce to enable the manipulation of bolting time. PhD thesis, University of Warwick.

Achom, Mingkee (2018) The role of Nodule Cysteine Rich secreted peptides in controlling nodulation. PhD thesis, University of Warwick.

Adebola, Titilayo Adunola (2017) The regime complex for plant variety protection: revisiting TRIPS implementation in Nigeria. PhD thesis, University of Warwick.

Amnuaykan, Piyatida (2015) Environmental and genetic regulation of juvenility in Antirrhinum majus. PhD thesis, University of Warwick.

Appanah, Rowin (2017) Replisome-mediated homeostasis of DNA/RNA hybrids in eukaryotic genomes is critical for cell fates and chromatin stability. PhD thesis, University of Warwick.

Arifin, Khaizurin T. (2013) Creating an orthogonal signalling pathway in S. cerevisiae. PhD thesis, University of Warwick.

Armitage, Andrew D. (2013) Alternaria alternata leaf spot pathogens : genetics, evolutionary history and diagnostics. PhD thesis, University of Warwick.

Atkinson, Laura Denise (2010) Genetic characterisation of post harvest spoilage in lettuce. PhD thesis, University of Warwick.

Bailey, Mark (Researcher in life sciences) (2014) An investigation into the role of SUMO proteases OVERLY TOLERANT to SALT1 and -2 in salicylic acid mediated defense signalling in Arabidopsis thaliana : toward understanding the role of SUMOylation in SA signalling. PhD thesis, University of Warwick.

Barnes, Christopher James (2014) Characterizing environmental, temporal and spatial scaling of Rhizosphere fungi in bioenergy crops : and their role in belowground carbon cycling. PhD thesis, University of Warwick.

Baroncelli, Riccardo (2012) Colletotrichum acutatum sensu lato : from diversity study to genome analysis. PhD thesis, University of Warwick.

Barrington, Christopher (2013) Epigenetic responses to environmental stress in plants. PhD thesis, University of Warwick.

Bassham, Diane C. (1993) The proteolytic processing of organellar proteins. PhD thesis, University of Warwick.

Bateman, Perry James Dominic (2014) Nutrient translocation of offspring in plants. PhD thesis, University of Warwick.

Bennett, Malcolm J. (1989) Structure and expression of glutamine synthetase in root nodules of Phaseolus Vulgaris L. PhD thesis, University of Warwick.

Bertoli, E. (1975) Membrane fluidity and functional organization of the mitochondrial membranes. PhD thesis, University of Warwick.

Blair, G. Eric (1974) Protein synthesis in chloroplasts. PhD thesis, University of Warwick.

Bramwell, Penny (1992) The characterisation and detection of plant Pathogenic streptomycetes in the natural environment. PhD thesis, University of Warwick.

Burns, Caitlin A. (2014) Characterising the functional role of rhizosphere fungi in Miscanthus giganteus bioenergy cropping systems. PhD thesis, University of Warwick.

Burton, Frances (2016) Molecular basis of Serendipita indica mediated mutualism in plants. PhD thesis, University of Warwick.

Carroll, Charlotte Elizabeth Ella (2014) The importance of aquaporins in Arabidopsis thaliana germination and seedling establishment. PhD thesis, University of Warwick.

Carter, Anthony D. (2013) Cell-type specific comparative analysis of lateral root and nodule development at phenotypic and genomic levels. PhD thesis, University of Warwick.

Castillo-Lorenzo, Elena (2018) Seed functional traits in crops and their wild relatives. PhD thesis, University of Warwick.

Chadd, Helen E. (1992) Biochemical and molecular approaches to the study of iron nutrition in the marine cyanobacterium synechococcus WH 7803. PhD thesis, University of Warwick.

Chappell, Lauren (2016) Characterisation of parsnip canker pathogens and identification of plant resistance. PhD thesis, University of Warwick.

Charlton, Georgina (2020) Proteomic analysis of drought & oxidative stress in Arabidopsis thaliana & Zea mays. PhD thesis, University of Warwick.

Chen, Fengling (1988) Studies on the two isoenzymes of NADH-dependent glutamate synthase in root nodules of "Phaseolus vulgaris L". PhD thesis, University of Warwick.

Cheng, Wei (2019) Gene expression and daylength regulation of bulb formation in onion (Allium cepa L.). PhD thesis, University of Warwick.

Collins, Spencer (2016) The biology and ecology of Aleyrodes proletella, the Cabbage Whitefly; a pest of Brassica crops. PhD thesis, University of Warwick.

Cooke, Emma J. (2013) Transcriptional analysis of the interaction between botrytis cinerea and a host arabidopsis thaliana using high-throughput data. PhD thesis, University of Warwick.

Daniell, Timothy John (1992) Regulation of expression of the glutamine synthetase GLN-[alpha] gene of phaseolus vulgaris L. PhD thesis, University of Warwick.

Darlison, Mark Geoffrey (1979) Cytoplasmic mutants of yeast : the isolation and genetic characterization of cytoplasmic mutants of Saccharomyces cerevisiae defective in oxidative phosphorylation. PhD thesis, University of Warwick.

Davies, Lawrence O. (2013) The effect of non-UV light on crop protection product degradation and soil microbial community structure and function. PhD thesis, University of Warwick.

Di Benedetto, Sara (2011) The function of BET11, a trans-Golgi SNARE protein of Arabidopsis thaliana. PhD thesis, University of Warwick.

Di Martino, Maura (2018) The role of NF-Y subunits in transcriptional regulation of the plant defense response. PhD thesis, University of Warwick.

Donald, Kenneth Allen Gordon (1991) Genetic and biochemical studies of mitochondria in the yeast saccharomyces cerevisiae. PhD thesis, University of Warwick.

Durrant, Oliver (2009) Structural investigation of the Arabidopsis thaliana circadian clock. PhD thesis, University of Warwick.

Dzimitrowicz, Natasha (2018) Investigating proteins that regulate the architecture of the plant Endoplasmic Reticulum. PhD thesis, University of Warwick.

Easterby-Smith, Sarah (2009) Cultivating commerce : connoisseurship, botany and the plant trade in London and Paris, c. 1760 – c. 1815. PhD thesis, University of Warwick.

Elderfield, Peter D. (1990) Proteolytic processing of imported chloroplast proteins. PhD thesis, University of Warwick.

Fairhead, Sebastian (2016) Translating genetics of oomycete resistance from Arabidopsis thaliana into Brassica production. PhD thesis, University of Warwick.

Finch, Jessica A. (2019) The role of cell cycle regulation in immunity-induced root growth inhibition in Arabidopsis thaliana. PhD thesis, University of Warwick.

Foster, Lesley (2016) Alternative splicing in plant defence. PhD thesis, University of Warwick.

Gacek, K. (Katarzyna) (2013) Cell-cell communication in early developing seeds of Arabidopsis thaliana. PhD thesis, University of Warwick.

Garajová, Žofia (2018) Understanding the impacts of temperature and soil moisture on the germination of Sclerotinia sclerotiorum sclerotia. PhD thesis, University of Warwick.

Gherli, Hussein (2017) Nitrogen use efficiency in Brassica napus. PhD thesis, University of Warwick.

Gherman, Julia (2019) Engineering stress resilient plants using gene regulatory network rewiring. PhD thesis, University of Warwick.

Gilmartin, Philip Mark (1986) The isolation and characterisation of nuclear-encoded light-regulated genes from "Pisum sativum" and their expression in transgenic plants of "Nicotiana tabacum". PhD thesis, University of Warwick.

Goodman, Jennifer (2018) The role of Feronia in regulating growth and development in Arabidopsis thaliana roots. PhD thesis, University of Warwick.

Granja Trávez, Rommel Santiago (2018) Biochemical characterization of multicopper oxidase enzymes from lignin degrading bacteria. PhD thesis, University of Warwick.

Griffiths, Edward John (1975) Studies on inhibitor resistances in the yeast Saccharomyces cerevisiae. PhD thesis, University of Warwick.

Grundy, Jack (2016) Control of environmental stress responses by the circadian clock and abscisic acid. PhD thesis, University of Warwick.

Guerreiro, Tailise Carolina de Souza (2019) Gene expression stochasticity, protein synthesis and the ageing process in the budding yeast Saccharomyces cerevisiae. PhD thesis, University of Warwick.

Gutaker, Rafał M. (2014) The genetic variation of cultivated flax (Linum usitatissimum L.) and the role of its wild ancestor (Linum bienne Mill.) in its evolution. PhD thesis, University of Warwick.

Hale, Christopher Charles (2017) Characterisation of plant (Brassica spp.) and microbial rhizosphere functions. PhD thesis, University of Warwick.

Hales, Kathryn Rebecca (2018) Developing research tools to investigate the biology and epidemiology of Pythium violae causing cavity spot on carrot to enable disease management. PhD thesis, University of Warwick.

Harrison, Lesley Ann (1985) The characterisation of a cellulolytic microbial community isolated from soil. PhD thesis, University of Warwick.

Harrison, Peter J. (2014) Biochemical investigations of the carotenoid cleavage dioxygenase enzyme family. PhD thesis, University of Warwick.

Harvey, Sarah (2013) The downy mildew effector HaRxL21 suppresses immune responses of Arabidopsis thaliana. PhD thesis, University of Warwick.

Hendry, Ruth Juliet (1995) Spatial modelling in plant ecology. PhD thesis, University of Warwick.

Hickman, Richard J. (2012) Transcriptional regulatory codes underlying Arabidopsis stress responses. PhD thesis, University of Warwick.

Hicks, Christine (2016) Transcriptional analysis of salt shock in Brassica oleracea. PhD thesis, University of Warwick.

Highfield, Peter Edmund (1978) Studies on the synthesis of the small subunit of fraction I protein. PhD thesis, University of Warwick.

Hill, James (1991) Genetic manipulation and biochemical studies of Saccharomyces Cerevisiae. PhD thesis, University of Warwick.

Huang, Ziyue (2013) Characterisation of dormancy cycling responses to environmental signals in contrasting Arabidopsis thaliana ecotypes. PhD thesis, University of Warwick.

Hughes, Linda Karen (2009) A bioinformatic analysis of genes involved in stress responses in Arabidopsis thaliana. PhD thesis, University of Warwick.

Hussain, Nosheed (2019) Long-range control of tissue specific gene expression in Arabidopsis. PhD thesis, University of Warwick.

Irvine, Michael Alastair (2014) Pattern formation and persistence in spatial plant ecology. PhD thesis, University of Warwick.

Issa, Reem Adnan (2010) Identification of glucosinolate profile in Brassica oleracea for quantitative trait locus mapping. PhD thesis, University of Warwick.

Jenkins, Sascha (2018) Examining Identity, Phylogeny and Pathogenicity Factors in Fusarium Species Affecting Pea. PhD thesis, University of Warwick.

Jironkin, Aleksey (2013) Computational and experimental analysis of plant promoters : identifying functional elements. PhD thesis, University of Warwick.

Johnson, Richard Alan (1987) Properties and synthesis of the ribulose 1.5 bisphosphate carboxylase large subunit binding protein of Hordeum vulgare. PhD thesis, University of Warwick.

Kancy, Stephanie Jayne Thorley (2017) The role of histone acetyltransferases in plant immunity. PhD thesis, University of Warwick.

Kell, Christopher Martin (1991) A molecular genetic analysis of L-asparaginase II synthesis in Erwinia Chrysanthemi NCPPB 1066. PhD thesis, University of Warwick.

Kelly, David Jacob (1985) The role of the intra-cytoplasmic membrane system in photosynthesis and differentiation in Rhodomicrobium vannielii. PhD thesis, University of Warwick.

Kerr, Gary W. (2013) The role of protein phosphatase PP2ACdc55 during meiosis in Saccharomyces cerevisiae. PhD thesis, University of Warwick.

Kiddle, Steven J. (2012) Using systems biology approaches to elucidate gene regulatory networks controlling the plant defence response. PhD thesis, University of Warwick.

Kirkham, Amy R. (2009) Global perspectives on the molecular ecology of photosynthetic picoeukaryotes. PhD thesis, University of Warwick.

Lagator, Mato (2012) Experimental evolution of herbicide resistance in chlamydomonas reinhardtii. PhD thesis, University of Warwick.

Lamb, Francis Ian (1984) Castor bean lectins : construction and sequencing of cDNA clones. PhD thesis, University of Warwick.

Law, Philip John (2013) Quantitative analysis of time-series microarray data, with application to investigating responses to environmental stresses in arabidopsis. PhD thesis, University of Warwick.

Lawal, Almustapha (2019) Investigating salt stress resilience in Brassica oleracea. PhD thesis, University of Warwick.

Lewis, Laura Ann (2012) Investigating the influence of phytopathogenic effectors upon host transcription. PhD thesis, University of Warwick.

Lewis, Mary C., Ph.D. (2011) The development of assays to determine the effect of environmental factors on the viability of Plasmodiophora brassicae resting spores. PhD thesis, University of Warwick.

Li, Chunyang (2011) Functional analysis of Arabidopsis Flowering locus T RNA and protein. PhD thesis, University of Warwick.

Li, Michael Kok Keng (2009) Quantitative analysis of chloroplast protein targeting. PhD thesis, University of Warwick.

Littlemore, James (1998) The ecological impact of recreation in British temperate woodlands. PhD thesis, University of Warwick.

Locke, James C. W. (2006) A systems biology approach to the Arabidopsis circadian clock. PhD thesis, University of Warwick.

Maple, Robert (2019) Meiosis associated Argonautes in male reproductive development. PhD thesis, University of Warwick.

Marshall, Eleanor Jane (2011) Molecular characterisation of small cysteine rich peptides during Arabidopsis thaliana seed development. PhD thesis, University of Warwick.

Matsoukas, Ioannis G. (2010) Genetic and physiological analysis of juvenility in plants. PhD thesis, University of Warwick.

May, J. Michael J (1988) The expression of biologically active recombinant ricin A chain "in vitro". PhD thesis, University of Warwick.

McGurl, Barry Francis (1986) Purification and characterisation of putative protein allergens from the seeds of the castor oil plant, "Ricinus communis". PhD thesis, University of Warwick.

McHattie, Stuart (2011) Modelling transcriptional networks in plant senescence. PhD thesis, University of Warwick.

Mendes, Ana T. (2011) Regulation of storage oil metabolism at the transcriptional level : filling and emptying Arabidopsis thaliana seeds. PhD thesis, University of Warwick.

Mohamed, Atef M. (2012) Targeting siRNA hotspots : a novel strategy for controlling viral diseases. PhD thesis, University of Warwick.

Morgan, Catherine Ruth (1985) Properties and synthesis of the ribulose-1.5-bisphosphate carboxylase large subunit binding protein. PhD thesis, University of Warwick.

Mould, Ruth M. (1992) Protein targeting to the thylakoid lumen. PhD thesis, University of Warwick.

Naish, Matthew (2018) Control of developmental reprogramming during somatic cell regeneration in Arabidopsis thaliana. PhD thesis, University of Warwick.

Nurika, Irnia (2013) Mechanisms of lignocellulosic conversion by the brown rot fungus serpula lacrymans. PhD thesis, University of Warwick.

O'Connell, Michael A. (2012) New methods for the study of physicochemical processes relevant to the agrochemicals industry. PhD thesis, University of Warwick.

Olive, Mark R. (1988) Wheat starch biosynthesis : organ-specific expression of genes encoding ADP-glucose pyrophosphorylase. PhD thesis, University of Warwick.

Osborn, Rupert W., 1966- (1990) The action of ricin A chain on eukaryotic ribosomes. PhD thesis, University of Warwick.

Osborne, Rory (2019) Uncovering the role of Serendipita indica effectors in enhancing host disease resistance. PhD thesis, University of Warwick.

Palmer, Jessica Louise (2019) The degradation of atmospheric pollutants by phyllosphere microbiota. PhD thesis, University of Warwick.

Pardal Bermejo, Alonso Javier (2017) Exploring the role of histone marks and chromatin remodelling ATPases in plant immunity. PhD thesis, University of Warwick.

Partis, Michael Dennis (1975) An investigation of the DCCD inhibition of mitochondrial ATPase. PhD thesis, University of Warwick.

Pateman, Cassandra Sophie Catherine (2002) RGS proteins and G protein signalling. PhD thesis, University of Warwick.

Peters, David William (1985) RNA synthesis in 'Candida albicans'. PhD thesis, University of Warwick.

Polański, Krzysztof (2015) Finding network modules and motifs regulating plant stress responses : integration and model-ling across multiple data sets. PhD thesis, University of Warwick.

Pombo-Villar, Esteban (1985) Some chemistry relating to turmerones. PhD thesis, University of Warwick.

Price, Jonathan Lewis (2018) Insights into doubled haploid breeding programs from a genome-wide transcriptome and methylome analysis of Brassica oleracea. PhD thesis, University of Warwick.

Putra, Hadi (2018) Enhanced epigenetic inheritance in Arabidopsis thaliana. PhD thesis, University of Warwick.

Quareshy, Mussa (2016) Towards understanding chemical perception and selectivity for TIR1 and AFB5 auxin F-box receptor family members in Arabidopsis. PhD thesis, University of Warwick.

Ransom, Elspeth M. (2018) Elucidating key components of the Lactuca sativa and Sclerotinia plant-pathogen interaction. PhD thesis, University of Warwick.

Rashid, Goran M. M. (2015) Discovery of novel lignin oxidizing enzymes from Sphingobacterium sp.T2. PhD thesis, University of Warwick.

Rashid, Md. Harun Ar (2016) Genetic regulation of daylength adaptation and bulb formation in onion (Allium cepa L.). PhD thesis, University of Warwick.

Rhodes, Johanna (2012) Identifying gene regulatory networks common to multiple plant stress responses. PhD thesis, University of Warwick.

Rich, Charlotte (2018) Cell type-specific transcriptomic analyses of immunity in Arabidopsis thaliana roots. PhD thesis, University of Warwick.

Robinson, Colin (1984) Uptake and processing of chloroplast polypeptides. PhD thesis, University of Warwick.

Robson, Paul R. H. (1991) Towards the mechanism of carotenogenesis in Myxococcus xanthus. PhD thesis, University of Warwick.

Ronson, Clive William (1979) Genetic and physiological studies on Rhizobium trifolii. PhD thesis, University of Warwick.

Rowland, Catherine Emily (2019) Towards a mechanistic understanding of PBP-mediated beta-lactam resistance in Streptococcus pneumoniae. PhD thesis, University of Warwick.

Schafer, David Gerald (2013) Mechanisms underlying epigenetic gene silencing in maize. PhD thesis, University of Warwick.

Searle, Geoffrey Francis William (1969) Copper-proteins in photosynthesis. PhD thesis, University of Warwick.

Sergaki, Chrysi (2019) The effect of beneficial microbes on plant fitness and microbiome – an integrated approach. PhD thesis, University of Warwick.

Sgamma, Tiziana (2012) Regulation of juvenility in Antirrhinum majus. PhD thesis, University of Warwick.

Shackleton, Jamie B. (1991) The uptake of proteins by the chloroplast and their subsequent routing to the thylakoid. PhD thesis, University of Warwick.

Shepperd, Lindsey A. (2013) Role and regulation of the kinetochore protein Spc7 in fission yeast mitosis. PhD thesis, University of Warwick.

Siddell, Stuart G. (1976) Protein synthesis in etioplasts and developing chloroplasts. PhD thesis, University of Warwick.

Sinfield, Oliver Paul (2019) Processing bodies are dynamically localised and associate with multiple organelles throughout the replicative lifespan of the yeast cell. PhD thesis, University of Warwick.

Smeeton, Rachel Clair (2010) An evaluation of the effects of over-production of ABA on whole plant water use, growth and productivity. PhD thesis, University of Warwick.

Smith, Madeleine Joy (2008) The biology and molecular biology of Polymyxa species and their interactions with plants and viruses. PhD thesis, University of Warwick.

Smith, Steve, 1952- (1980) Synthesis of the small subunit of ribulose-1,5-bisphosphate carboxylase. PhD thesis, University of Warwick.

Stoker, Claire (2016) Influence of the circadian clock on Arabidopsis defence against Botrytis cinerea. PhD thesis, University of Warwick.

Talbot, Adam R. (2014) Regulatory networks controlling ANAC092 expression during different stress responses in Arabidopsis thaliana. PhD thesis, University of Warwick.

Taylor, Paul Phillip (1986) The cloning and expression of amylolytic genes in "Escherichia coli" and their role in starch utilization. PhD thesis, University of Warwick.

Teft, Matt (2018) Characterising the role of ATSCL26 in root development. PhD thesis, University of Warwick.

Thompson, Simon J. (1998) Proteolytic processing of thylakoid proteins. PhD thesis, University of Warwick.

Tock, Andrew J. (2017) Applying next-generation sequencing to enable marker-assisted breeding for adaptive traits in common bean (Phaseolus vulgaris L.). PhD thesis, University of Warwick.

Tolley, Nicholas Joseph (2010) Functional analysis of a reticulon protein from Arabidopsis thaliana. PhD thesis, University of Warwick.

Tregear, James W. (1989) The lectin gene family of Ricinus communis. PhD thesis, University of Warwick.

Usher, Sarah Louise (2009) Nucleosome positioning in Arabidopsis. PhD thesis, University of Warwick.

Vies, Saskia Maria van der (1989) Isolation and expression of a plastid alpha chaperonin cDNA sequence from "triticum aestivum". PhD thesis, University of Warwick.

Vladimirou, Elina (2010) Diffusion of proteins in chloroplast membranes. PhD thesis, University of Warwick.

Vágány, Viktória (2012) Characterisation of fusarium pathogens in the UK. PhD thesis, University of Warwick.

Walker, Denise S. (1994) Investigation of the basis of specific secretion of cellulase CeIV by the Out apparatus of Erwinia carotovora subspecies carotovora. PhD thesis, University of Warwick.

Watson, Gregory Michael Francis (1992) Chaperonins in Rhodobacter sphaeroides and Pisum sativum. PhD thesis, University of Warwick.

Weynberg, Karen Dawn (2009) Isolation and characterisation of novel viruses infecting marine phytoplankton. PhD thesis, University of Warwick.

Wibowo, Anjar (2016) Epigenetic response and adaptation to salt stress in Arabidopsis thaliana. PhD thesis, University of Warwick.

Williams, Richard Stephen (1987) Studies on the peripheral light-harvesting chlorophyll-protein complex of photosystem I in "Pisum sativum L.". PhD thesis, University of Warwick.

Wood, Katherine Anne (1991) A preproabrin : genomic cloning and expression of the constituent polypeptides in heterologous systems. PhD thesis, University of Warwick.

Woodcock, Ailidh (2014) The effect of SUMOylation on DELLA proteins and abiotic stress responses in Arabidopsis thaliana. PhD thesis, University of Warwick.

Woolley, Victoria Clare (2018) Elucidating the natural function of cordycepin, a secondary metabolite of the fungus Cordyceps militaris, and its potential as a novel biopesticide in Integrated Pest Management. PhD thesis, University of Warwick.

Zanders, Edward Douglas (1976) Mitochondrial genes and their expression in Saccharomyces cerevisiae. PhD thesis, University of Warwick.

Zhang, Fangfang (2019) Expression and purification of the auxin efflux transporter PIN1 from the arabidopsis PIN protein family in Sf9 insect cells. PhD thesis, University of Warwick.

Dataset

Habershon, Scott and Baker, Lewis A. Data for Photosynthetic pigment-protein complexes as highly-connected networks : implications for robust energy transport. [Dataset]