Journal Article

Adams, Sally and Carré, Isabelle A.. (2011) Downstream of the plant circadian clock : output pathways for the control of physiology and development. Essays in Biochemistry, Vol.49 . pp. 53-69. ISSN 0071-1365

Adams, Sally, Manfield, Ian, Stockley, Peter and Carré, Isabelle A.. (2015) Revised morning loops of the Arabidopsis circadian clock based on analyses of direct regulatory interactions. PLoS One, 10 (12). e0143943. ISSN 1932-6203

Akman, Ozgur E., Rand, D. A. (David A.), Brown, Paul E. and Millar, A. J. (Andrew J.). (2010) Robustness from flexibility in the fungal circadian clock. BMC Systems Biology, Vol.4 (No.88). ISSN 1752-0509

Alexandersson, Erik, Becker, John V. W., Jacobson, Dan, Nguema-Ona, Eric, Steyn, Cobus, Denby, Katherine J. and Vivier, Melané A.. (2011) Constitutive expression of a grapevine polygalacturonase-inhibiting protein affects gene expression and cell wall properties in uninfected tobacco. BMC Research Notes, Vol.4 (No.1). p. 493. ISSN 1756-0500

Ali, Muhammad Amjad, Wieczorek, Krzysztof, Kreil, David and Bohlmann, Holger. (2014) The beet cyst nematode Heterodera schachtii modulates the expression of WRKY transcription factors in syncytia to favour its development in a Arabidopsis roots. PLoS One, Volume 9 (Number 7). Article number e102360. ISSN 1932-6203

Allen, Stuart C. H., Moore, Katherine A. H., Marsden, Catherine J., Fölöp, Vilmos , Moffat, Kevin G., Lord, Mike (J. Mike), Ladds, Graham and Roberts, Lynne M. . (2007) The isolation and characterisation of temperature-dependent Ricin A chain molecules in Saccharomyces cerevisiae. FEBS Journal, Vol.274 (No.21). pp. 5586-5599. ISSN 1742-464x

Allender, Charlotte J. and King , Graham J.. (2010) Origins of the amphiploid species Brassica napus L. investigated by chloroplast and nuclear molecular markers. BMC Plant Biology, Vol.10 (Article 54). ISSN 1471-2229

Arnold, David. (2008) Plant capitalism and company science: the Indian career of Nathaniel Wallich. Modern Asian Studies, Vol.42 (No.5). pp. 899-928. ISSN 0026-749X

Atwell, Susanna, Corwin, Jason A., Soltis, Nicole E., Subedy, Anushryia, Denby, Katherine J. and Kliebenstein, Daniel James. (2015) Whole genome resequencing of Botrytis cinerea isolates identifies high levels of standing diversity. Frontiers in Microbiology, 6 . pp. 1-14. 996. ISSN 1664-302X

Awan, Sajjad Zahoor, Chandler, Jake Owen, Harrison, Peter J. , Sergeant, Martin J., Bugg, Tim and Thompson, Andrew D.. (2017) Promotion of germination using hydroxamic acid inhibitors of 9-cis-epoxycarotenoid dioxygenase. Frontiers in Plant Science, 8 . 357. ISSN 1664-462X

Bailey, Mark, Srivastava, Anjil, Conti, Lucio, Nelis, Stuart, Zhang, Cunjin, Florance, Hannah, Love, Andrew, Milner, Joel, Napier, R. (Richard), Grant, Murray and Sadanandom, Ari. (2016) Stability of small ubiquitin-like modifier (SUMO) proteases OVERLY TOLERANT TO SALT1 and -2 modulates salicylic acid signalling and SUMO1/2 conjugation in Arabidopsis thaliana. Journal of Experimental Botany, 67 (1). pp. 353-363. ISSN 0022-0957

Baker, Lewis A., Horbury, Michael D., Greenough, Simon E., Allais, Florent, Walsh, Patrick S., Habershon, Scott and Stavros, Vasilios G.. (2015) Ultrafast photoprotecting sunscreens in natural plants. The Journal of Physical Chemistry Letters, 7 (1). pp. 56-61. ISSN 1948-7185

Barnes, Christopher J., Burns, Caitlin A., van der Gast, Christopher J., McNamara, Niall P. and Bending, Gary D.. (2016) Spatio-temporal variation of core and satellite arbuscular mycorrhizal fungus communities in Miscanthus giganteus. Frontiers in Microbiology, 7 . 1278. ISSN 1664-302X

Barnes, Christopher J., van der Gast, Christopher J., Burns, Caitlin A., McNamara, Niall P. and Bending, Gary D.. (2016) Temporally variable geographical distance effects contribute to the assembly of root-associated fungal communities. Frontiers in Microbiology, 7 . pp. 1-13. 195. ISSN 1664-302X

Baroncelli, Riccardo, Amby, Daniel Buchvaldt, Zapparata, Antonio, Sarrocco, Sabrina, Vannacci, Giovanni, Le Floch, Gaétan, Harrison, Richard J., Holub, E. B., Sukno, Serenella A., Sreenivasaprasad, Surapareddy and Thon, Michael R.. (2016) Gene family expansions and contractions are associated with host range in plant pathogens of the genus Colletotrichum. BMC Genomics, 17 (1). 555. ISSN 1471-2164

Baroncelli, Riccardo, Sreenivasaprasad, S., Sukno, S. A., Thon, M. R. and Holub, E. B.. (2014) Draft genome sequence of Colletotrichum acutatum sensu lato (Colletotrichum fioriniae). Genome Announcements, Volume 2 (Number 2). e00112-e00114. ISSN 2169-8287

Baxter, Laura, Jironkin, Aleksey, Hickman, R. D. G., Moore, Jonathan D., Barrington, Christopher, Krusche, Peter, Dyer, Nigel, Buchanan-Wollaston, Vicky, Tiskin, Alexander, Beynon, Jim, Denby, Katherine J. and Ott, Sascha. (2012) Conserved noncoding sequences highlight shared components of regulatory networks in dicotyledonous plants. The Plant Cell, Vol.24 (No.10). pp. 3949-3965. ISSN 1040-4651

Bechtold, Ulrike, Albihlal, Waleed S., Lawson, Tracy, Fryer, Michael J., Sparrow, Penelope A. C., Richard, François, Persad, Ramona, Bowden, Laura, Hickman, Richard D. G., Martin, Cathie, Beynon, Jim, Buchanan-Wollaston, Vicky, Baker, N. R., Morison, James I. L., Schoffl, Friedrich, Ott, Sascha and Mullineaux, Philip M.. (2013) Arabidopsis HEAT SHOCK TRANSCRIPTION FACTORA1b overexpression enhances water productivity, resistance to drought, and infection. Journal of Experimental Botany, Volume 64 (Number 11). pp. 3467-3481. ISSN 0022-0957

Berry, P. M. (Peter M.), Teakle, Graham, Foulkes, John, White, Philip J. and Spink, J. H. (John H.). (2008) Breeding for improved nitrogen use efficiency in oilseed rape. Acta Horticulturae, Vol.867 . ISSN 0567-7572

Bila, J., Mortensen, C. N., Andresen, M., Vicente, Joana G. and Wulff, E. G.. (2013) Xanthomonas campestris pv. campestris race 1 is the main causal agent of black rot of Brassicas in Southern Mozambique. African Journal of Biotechnology, Volume 12 (Number 6). pp. 602-610. ISSN 1684-5315

Borhan, Mohammad H., Holub, E. B., Beynon, Jim, Rozwadowski, Kevin and Rimmer, Samuel Roger. (2004) The Arabidopsis TIR-NB-LRR GeneRAC1 confers resistance to Albugo candida (white rust) and is dependent on EDS1 but not PAD4. Molecular Plant-Microbe Interactions, Volume 17 (Number 7). pp. 711-719. ISSN 0894-0282

Bos, Jorunn I. B., Armstrong, Miles R., Gilroy, Eleanor M., Boevink, Petra C., Hein, Ingo, Taylor, Rosalind M., Zhendong, Tian, Engelhardt, Stefan, Vetukuri, Ramesh R., Harrower, Brian, Dixelius, Christina, Bryan, Glenn J., Sadanandom, Ari, Whisson, Stephen C., Kamoun, Sophien and Birch, Paul R. J.. (2010) Phytophthora infestans effector AVR3a is essential for virulence and manipulates plant immunity by stabilizing host E3 ligase CMPG1. Proceedings of the National Academy of Sciences, Vol.107 (No.21). pp. 9909-9914. ISSN 0027-8424

. (2011) High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell, The, Vol.23 (No.3). pp. 873-894. ISSN 1040-4651

Brilli, Matteo, Trabocchi, Andrea, Weil, Tobias, Cavalieri, Duccio and Stefanini, Irene. (2017) Relations between effects and structure of small bicyclic molecules on the complex model system saccharomyces cerevisiae. Frontiers in Pharmacology, 8 . 170. ISSN 1663-9812

Broadley, Martin R., White, Philip J., Hammond, John P., Graham, Neil S. , Bowen, Helen C., Emmerson, Z. F., Fray, R. G. , Iannetta, P. P. M., McNicol, J. W. and May, Sean T.. (2008) Evidence of neutral transcriptome evolution in plants. New Phytologist, Vol.180 (No.3). pp. 587-593. ISSN 0028-646X

Brumley, Douglas R., Polin, Marco, Pedley, T. J. and Goldstein, Raymond E.. (2012) Hydrodynamic synchronization and metachronal waves on the surface of the colonial alga Volvox carteri. Physical Review Letters, Volume 109 (Number 26). Article number 268102 . ISSN 0031-9007

Bräutigam, Katharina, Vining, Kelly J., Lafon-Placette, Clément, Fossdal, Carl G., Mirouze, Marie, Jose, Gutiérrez-Marcos, Fluch, Silvia, Fraga, Mario Fernández, Guevara, M. Ángeles, Abarca, Dolores, Johnsen, Øystein, Maury, Stéphane, Strauss, Steven H., Campbell, Malcolm M., Rohde, Antje, Díaz-Sala, Carmen and Cervera, María-Teresa. (2013) Epigenetic regulation of adaptive responses of forest tree species to the environment. Ecology and Evolution, Volume 3 (Number 2). pp. 399-415. ISSN 2045-7758

Burgess, Alexandra J., Retkute, Renata, Preston, Simon P., Jensen, Oliver E., Pound, Michael P., Pridmore, Tony P. and Murchie, Erik H.. (2016) The 4-dimensional plant : effects of wind-induced canopy movement on light fluctuations and photosynthesis. Frontiers in Plant Science, 7 (1392). ISSN 1664-462X

Busi, R. (Roberto), Neve, Paul and Powles, Stephen B.. (2013) Evolved polygenic herbicide resistance in Lolium rigidum by low-dose herbicide selection within standing genetic variation. Evolutionary Applications, Volume 6 (Number 2). pp. 231-242. ISSN 1752-4571

Caillaud, Marie-Cécile, Wirthmueller, Lennart, Sklenar, Jan, Findlay, Kim, Piquerez, Sophie J. M., Jones, Alexandra M., Robatzek, Silke, Jones, Jonathan D. G. and Faulkner, Christine. (2014) The plasmodesmal protein PDLP1 localises to haustoria-associated membranes during downy mildew infection and regulates callose deposition. PLoS Pathogens, Volume 10 (Number 11). Article number e1004496. ISSN 1553-7374

Cain, Peter, Holdermann, Iris, Sinning, Irmgard, Johnson, Arthur E. and Robinson, Colin. (2011) Binding of chloroplast signal recognition particle to a thylakoid membrane protein substrate in aqueous solution and delineation of the cpSRP43–substrate interaction domain. Biochemical Journal, Vol.437 (No.1). pp. 149-155. ISSN 0264-6021

Calderón Villalobos, Luz Irina A, Lee, Sarah C., Oliveira, Cesar de, Ivetac, Anthony, Brandt, Wolfgang, Armitage, Lynne, Sheard, Laura B., Tan, Xu, Parry, Geraint, Mao, Haibin, Zheng, Ning, Napier, R. (Richard), Kepinski, Stefan and Estelle, Mark. (2012) A combinatorial TIR1/AFB–Aux/IAA co-receptor system for differential sensing of auxin. Nature Chemical Biology, Volume 8 (Number 5). pp. 477-485. ISSN 1552-4450

Campbell, Kate, Vowinckel, Jakob, Mülleder, Michael, Malmsheimer, Silke, Lawrence, Nicola, Calvani, Enrica, Miller-Fleming, Leonor, Alam, Mohammad T., Christen, Stefan, Keller, Markus A. and Ralser, Markus. (2015) Self-establishing communities enable cooperative metabolite exchange in a eukaryote. eLife, 4 . e09943. ISSN 2050-084X

Carrier, David J., Abu Bakar, Norliza Tendot, Swarup, Ranjan, Callaghan, Richard, Napier, R. (Richard), Bennett, Malcolm J. and Kerr, Ian D.. (2008) The binding of auxin to the Arabidopsis auxin influx transporter AUX1. Plant Physiology, Volume 148 (Number 1). pp. 529-535. ISSN 0032-0889

Carter, Anthony D., Bonyadi, Roxanna and Gifford, Miriam L.. (2013) The use of fluorescence-activated cell sorting in studying plant development and environmental responses. The International Journal of Developmental Biology, Volume 57 . pp. 545-552. ISSN 0214-6282

Cools, Katherine, Chope, Gemma A., Hammond, John P., Thompson, Andrew J. and Terry, Leon A. (Leon Alexander). (2011) Onion gene expression in response to ethylene and 1-MCP. Plant Physiology, Vol.156 (No.3). pp. 1639-1652. ISSN 1532-2548

Couto, Daniel, Niebergall, Roda, Liang, Xiangxiu, Bücherl, Christoph A., Sklenar, Jan, Macho, Alberto P., Ntoukakis, Vardis, Derbyshire, Paul, Altenbach, Denise, Maclean, Dan, Robatzek, Silke, Uhrig, Joachim, Menke, Frank, Zhou, Jian-Min and Zipfel, Cyril. (2016) The Arabidopsis protein phosphatase PP2C38 negatively regulates the central immune kinase BIK1. PLoS Pathogens, 12 (8). e1005811. ISSN 1553-7374

Cunliffe, Michael, Whiteley, Andrew S., Newbold, Lindsay, Oliver, Anna, Schäfer, Hendrik and Murrell, J. C. (J. Colin). (2009) Comparison of bacterioneuston and bacterioplankton dynamics during a phytoplankton bloom in a fjord mesocosm. Applied and Environmental Microbiology, Vol.75 (No.22). pp. 7173-7181. ISSN 0099-2240

Dai, Jinhuo, Nanayakkara, Sepa, Lamb, Thomas, Clark, Andrew J., Guo, Si-Xuan, Zhang, Jie, Patti, Antonio F. and Saito, Kei. (2016) Effect of the N-based ligands in copper complexes for depolymerisation of lignin. New Journal of Chemistry, 40 (4). pp. 3511-3519. ISSN 1144-0546

Davies, L. R. and Allender, Charlotte J.. (2017) Who is sowing our seeds? A systematic review of the use of plant genetic resources in research. Genetic Resources and Crop Evolution . ISSN 0925-9864 (In Press)

Davies, Lawrence O., Schäfer, Hendrik, Marshall, Samantha, Bramke, Irene, Oliver, Robin G. and Bending, Gary D.. (2013) Light structures phototroph, bacterial and fungal communities at the soil surface. PLoS One, Volume 8 (Number 7). Article number e69048. ISSN 1932-6203

Davis, Seth J. and Millar, A. J. (Andrew J.). (2001) Watching the hands of the Arabidopsis biological clock. Genome Biology, Vol.2 (No.3). ISSN 1474-7596

Dufresne, Alexis, Ostrowski, Martin, Scanlan, David J. , Garczarek, Laurence, Mazard, Sophie, Palenik, Brian P., Paulsen, Ian T., Tandeau de Marsac, Nicole, Johnson, Justin, Post, Anton F., Hess, Wolfgang R. and Partensky, Frédéric. (2008) Unraveling the genomic mosaic of a ubiquitous genus of marine cyanobacteria. Genome Biology, Vol.9 (No.R90). Article no.R90. ISSN 1474-7596

Dupree, Ray, Simmons, Thomas J., Mortimer, Jennifer C., Patel, Dharmesh, Iuga, Dinu, Brown, Steven P. and Dupree, Paul. (2015) Probing the molecular architecture of Arabidopsis thaliana secondary cell walls using two- and three-dimensional 13C solid state nuclear magnetic resonance spectroscopy. Biochemistry, Volume 54 (Number 14). pp. 2335-2345. ISSN 0006-2960

Durek, P., Schmidt, R., Heazlewood, J. L., Jones, Alexandra M., MacLean, Daniel, Nagel, Alexander, Kersten, Birgit and Schulze, W. X.. (2010) PhosPhAt : the Arabidopsis thaliana phosphorylation site database : an update. Nucleic Acids Research, Volume 38 (Supplement 1). D828-D834. ISSN 0305-1048

Edwards, Kieron D., Akman, Ozgur E., Knox, Kirsten, Lumsden, P. J., Thomson, Adrian W., Brown, Paul E., Pokhilko, Alexandra, Kozma-Bognar, Laszlo, Nagy, Ferenc, Rand, D. A. and Millar, A. J.. (2010) Quantitative analysis of regulatory flexibility under changing environmental conditions. Molecular Systems Biology, Vol.6 (No.424). ISSN 1744-4292

Eichmann, Ruth and Schäfer, P. (Patrick). (2012) The endoplasmic reticulum in plant immunity and cell death. Frontiers in Plant Science, Volume 3 . Article number 200. ISSN 1664-462X

Erent, Muriel, Drummond, Douglas R. and Cross, Robert A.. (2012) S. pombe kinesins-8 promote both nucleation and catastrophe of microtubules. PLoS One, Vol.7 (No.2). e30738. ISSN 1932-6203

Fan, Jun, Mohareb, Fady, Jones, Alexandra M. and Bessant, Conrad. (2012) MRMaid : the SRM assay design tool for Arabidopsis and other species. Frontiers in Plant Science, Volume 3 . Article number 164. ISSN 1664-462X

Feng, Jianfeng, Yi, Dongyun, Krishna, Ritesh, Guo, Shuixia and Buchanan-Wollaston, Vicky. (2009) Listen to genes : dealing with microarray data in the frequency domain. PL o S One, Vol.4 (No.4). ISSN 1932-6203

Finch-Savage, William E. and Footitt, Steven. (2012) To germinate or not to germinate : a question of dormancy relief not germination stimulation. Seed Science Research, Vol.22 (No.4). pp. 243-248. ISSN 0960-2585

Fita, Ana, Bowen, Helen C., Hayden, Rory M., Nuez, F., Picó, Belén and Hammond, John P.. (2012) Diversity in expression of phosphorus (P) responsive genes in Cucumis Melo L. PLoS One, Vol.7 (No.4). Article no. e35387. ISSN 1932-6203

Footitt, Steven, Clay, Heather A., Dent, Katherine and Finch-Savage, William E.. (2014) Environment sensing in spring-dispersed seeds of a winter annual Arabidopsis influences the regulation of dormancy to align germination potential with seasonal changes. New Phytologist, Volume 202 (Number 3). pp. 929-939. ISSN 0028-646X

Footitt, Steven, Palleschi, Simonetta, Fazio, Eugenio, Palomba, Raffaele, Finch-Savage, William E. and Silvestroni, Leopoldo. (2016) Ultra-weak photon emission from the seed coat in response to temperature and humidity - a potential mechanism for environmental signal transduction in the soil seed bank. Photochemistry and Photobiology, 92 (5). pp. 678-687. ISSN 0031-8655

Footitt, Steven, Ölcer-Footitt, Hülya, Hambidge, Angela J. and Finch-Savage, William E.. (2017) A laboratory simulation of Arabidopsis seed dormancy cycling provides new insight into its regulation by clock genes and the dormancy-related genes DOG1 , MFT , CIPK23 and PHYA. Plant, Cell & Environment, 40 (8). pp. 1474-1486. ISSN 0140-7791

Fukami, Hironobu, Chen, Chaolun Allen, Budd, Ann F., Collins, Allen, Wallace, Carden C., Chuang, Yao-Yang, Chen, Chienhsun, Dai, Chang-Feng, Iwao, Kenji, Sheppard, Charles (Charles R. C.) and Knowlton, Nancy. (2008) Mitochondrial and nuclear genes suggest that stony corals are monophyletic but most families of stony corals are not (Order Scleractinia, Class Anthozoa, Phylum Cnidaria). PL o S One, Vol.3 (No.9). ISSN 1932-6203

Gastner, Michael T., Oborny, Beata, Zimmermann, D. K. and Pruessner, Gunnar. (2009) Transition from connected to fragmented vegetation across an environmental gradient: scaling laws in ecotone geometry. American Naturalist, Vol.174 (No.1). E23-E39. ISSN 0003-0147

Gattolin, Stefano, Sorieul, Mathias and Frigerio, Lorenzo. (2011) Mapping of tonoplast intrinsic proteins in maturing and germinating Arabidopsis seeds reveals dual localization of embryonic TIPs to the tonoplast and plasma membrane. Molecular Plant, Volume 4 (Number 1). pp. 180-189. ISSN 1674-2052

Gattolin, Stefano, Sorieul, Mathias and Frigerio, Lorenzo. (2010) Tonoplast intrinsic proteins and vacuolar identity. Biochemical Society Transactions, Vol.38 (No.3). pp. 769-773. ISSN 0300-5127

Gattolin, Stefano, Sorieul, Mathias, Hunter, P. R. (Paul R.), Khonsari, Roman H. and Frigerio, Lorenzo. (2009) In vivo imaging of the tonoplast intrinsic protein family in Arabidopsis roots. BMC Plant Biology, Vol.9 . Article 133. ISSN 1471-2229

Gifford, Miriam L., Banta, Joshua A., Katari, Manpreet S., Hulsmans, Jo, Chen, Lisa, Ristova, Daniela, Tranchina, Daniel, Purugganan, Michael D., Coruzzi, Gloria, Birnbaum, Kenneth D., Rosas, Ulises and Cibrian-Jaramillo, Angelica. (2013) Plasticity regulators modulate specific root traits in discrete nitrogen environments. PLoS Genetics, Volume 9 (Number 9). Article number e1003760. ISSN 1553-7390

Gladders, P. (Peter), Smith, J. E., Kirkpatrick, L., Clewes, E., Grant, C., Barbara, Dez J., Barnes, A. V. and Lane, C. R.. (2011) First record of verticillium wilt (Verticillium longisporum) in winter oilseed rape in the UK. New Disease Reports, Volume 23 (Number 8). ISSN 2044-0588

Gosling, Paul, Mead, A. (Andrew), Proctor, Maude, Hammond, John P. and Bending, G. D. (Gary D.). (2013) Contrasting arbuscular mycorrhizal communities colonizing different host plants show a similar response to a soil phosphorus concentration gradient. New Phytologist, Volume 198 (Number 2). pp. 546-556. ISSN 0028-646X

Grierson, Claire, Barnes, S. R., Chase, Mark W., Clarke, M., Grierson, Don, Edwards, K. J., Jellis, G. J., Jones, Jonathan D. G., Knapp, Sandra, Oldroyd, G., Poppy, Guy M., Temple, P., Williams, Roger and Bastow, Ruth. (2011) One hundred important questions facing plant science research. New Phytologist, Vol.192 (No.1). pp. 6-12.

Grønlund, Jesper T., Eyres, Alison, Kumar, Sanjeev, Buchanan-Wollaston, Vicky and Gifford, Miriam L.. (2012) Cell specific analysis of Arabidopsis leaves using fluorescence activated cell sorting. Journal of Visualized Experiments (No.68). e4214. ISSN 1940-087X

Hadlington, Jane L., Santoro, Aniello, Nuttall, James, Denecke, J. (Jurgen), Ma, Julian K.-C., Vitale, A. (Alessandro) and Frigerio, Lorenzo. (2003) The c-terminal extension of a hybrid immunoglobulin A/G heavy chain is responsible for its Golgi-mediated sorting to the vacuole. Molecular Biology of the Cell, Vol.14 (No.6). pp. 2592-2602. ISSN 1059-1524

Hartmann, Manuela, Gómez-Pereira, Paola R., Grob, Carolina, Ostrowski, Martin, Scanlan, David J. and Zubkov, Mikhail V. . (2014) Efficient CO2 fixation by surface Prochlorococcus in the Atlantic Ocean. The ISME Journal, Volume 8 (Number 11). pp. 2280-2289. ISSN 1751-7362

Hartwright, Lucy M., Hunter, Paul J. and Walsh, John A.. (2009) A comparison of Olpidium isolates from a range of host plants using internal transcribed spacer sequence analysis and host range studies. Fungal Biology, Vol.114 (No.1). pp. 26-33. ISSN 0953-7562

Helliwell, Katherine Emma, Lawrence, Andrew David, Holzer, Andre, Kudahl, Johan, Sasso, Severin, Kräutler, Bernhard , Scanlan, David J. , Warren , Martin James and Smith, Alison Gail. (2016) Cyanobacteria and eukaryotic algae use different chemical variants of vitamin B12. Current Biology, 26 (8). pp. 999-1008. ISSN 0960-9822

Hilton, Sally, Bennett, Amanda J., Keane, Gary, Bending, G. D. (Gary D.), Chandler, David, Stobart, Ron and Mills, Peter R. (Peter Richard). (2013) Impact of shortened crop rotation of oilseed rape on soil and rhizosphere microbial diversity in relation to yield decline. PLoS One, Volume 8 (Number 4). e59859. ISSN 1932-6203

Ho, Thien, Wang, Liang, Huang, Linfeng, Li, Zhigang, Pallett, Denise W., Dalmay, Tamas, Ohshima, Kazusato, Walsh, John A. and Wang, Hui. (2010) Nucleotide bias of DCL and AGO in plant anti-virus gene silencing. Protein & Cell, Vol.1 (No.9). pp. 847-858. ISSN 1674-8018

Holub, E. B.. (2008) Natural history of Arabidopsis thaliana and oomycete symbioses. European Journal of Plant Pathology, Vol.122 (No.1). pp. 91-109. ISSN 0929-1873

Hong, Yiguo and Jackson, Stephen D.. (2015) Floral induction and flower formation : the role and potential applications of miRNAs. Plant Biotechnology Journal, 13 (3). pp. 282-292. ISSN 1467-7644

Hunt, E. (Emma), Gattolin, Stefano, Newbury, H. J., Bale, J. S. (Jeffrey S.), Tseng, Hua-Ming, Barrett, D. A. (David A.) and Pritchard, J. (Jeremy). (2010) A mutation in amino acid permease AAP6 reduces the amino acid content of the Arabidopsis sieve elements but leaves aphid herbivores unaffected. Journal of Experimental Botany, Vol.61 (No.1). pp. 55-64. ISSN 0022-0957

Hunter, Paul J., Teakle, Graham R. and Bending, Gary D.. (2014) Root traits and microbial community interactions in relation to phosphorus availability and acquisition, with particular reference to Brassica. Frontiers in Plant Science, Volume 5 . ISSN 1664-462X

Irwin, Judith A., Lister, Clare, Soumpourou, Eleni, Zhang, Yanwen, Howell, Elaine C., Teakle, Graham R. and Dean, Caroline. (2012) Functional alleles of the flowering time regulator FRIGIDA in the Brassica oleracea genome. BMC Plant Biology, Vol.12 (No.1). p. 21. ISSN 1471-2229

Jackson, Stephen D. and Hong, Yiguo . (2012) Systemic movement of FT mRNA and a possible role in floral induction. Frontiers in Plant Science, Vol.3 . ISSN 1664-462X

Jannat, Shopan, Mou, Haipeng, Zhang, Lili, Zhang, Changtong, Ma, Weiwei, Walsh, John A., Hu, Zhongyuan, Yang, Jinghua and Zhang, Mingfang. (2017) Eukaryotic translation initiation factor 2B-beta (eIF2B β), a new class of plant virus resistance gene. The Plant Journal . ISSN 0960-7412 (In Press)

Jeanneret, Raphaël, Contino, Matteo and Polin, Marco. (2016) A brief introduction to the model microswimmer Chlamydomonas reinhardtii. The European Physical Journal Special Topics, 225 (11). pp. 2141-2156. ISSN 1951-6355

Jeanneret, Raphaël, Pushkin, Dmitri O., Kantsler, Vasily and Polin, Marco. (2016) Entrainment dominates the interaction of microalgae with micron-sized objects. Nature Communications, 7 . 12518. ISSN 2041-1723

Jurić, Ivan, González-Pérez, Vinicio, Hibberd, Julian, Edwards, Gerald and Burroughs, Nigel John. (2017) Size matters for single-cell C4 photosynthesis in Bienertia. Journal of Experimental Botany, 68 (2). pp. 255-267. ISSN 0022-0957

Katschnig, Diana, Jaarsma, Rinse, Almeida, Pedro, Rozema, J. and Schat, Henk. (2014) Differences in proton pumping and Na/H exchange at the leaf cell tonoplast between a halophyte and a glycophyte. AOB plants, 6 . pp. 1-13. plu023. ISSN 2041-2851

Kelly, Amélie A., Quettier, Anne-Laure, Shaw, Eve and Eastmond, Peter J.. (2011) Seed storage oil mobilization is important but not essential for germination or seedling establishment in Arabidopsis. Plant Physiology, Vol.157 (No.2). pp. 866-875. ISSN 0032-0889

Kemen, Eric, Gardiner, Anastasia, Schultz-Larsen, Torsten, Kemen, Ariane C., Balmuth, Alexi L., Robert-Seilaniantz, Alexandre, Bailey, Kate, Holub, E. B., Studholme, David J., MacLean, Daniel and Jones, Jonathan D. G.. (2011) Gene gain and loss during evolution of obligate parasitism in the white rust pathogen of Arabidopsis thaliana. PLoS Biology, Vol.9 (No.7). Article No. e1001094 . ISSN 1545-7885

Khatabi, Behnam, Molitor, Alexandra, Lindermayr, Christian, Pfiffi, Stefanie, Durner, Jörg, Wettstein, Diter von, Kogel, Karl-Heinz and Schäfer, Patrick. (2012) Ethylene supports colonization of plant roots by the mutualistic fungus Piriformospora indica. PLoS One, Volume 7 (Number 4). Article number e35502. ISSN 1932-6203

Kiddle, Steven J., Windram, Oliver P., McHattie, Stuart, Mead, A., Beynon, Jim, Buchanan-Wollaston, Vicky, Denby, Katherine J. and Mukherjee, Sach. (2009) Temporal clustering by affinity propagation reveals transcriptional modules in Arabidopsis thaliana. Bioinformatics, Vol.26 (No.3). pp. 355-362. ISSN 1367-4811

Kitchen, James and Allaby, Robin G.. (2012) The limits of mean-field heterozygosity estimates under spatial extension in simulated plant populations. PLoS ONE, Vol.7 (No.8). e43254. ISSN 1932-6203

Kloosterman, Bjorn, De Koeyer, David, Griffiths, Rebecca, Flinn , Barry, Steuernagel, Burkhard, Scholz, Uwe, Sonnewald, Sophia, Sonnewald, Uwe, Bryan, Glenn J., Prat, Salome, Bánfalvi, Zsófia, Hammond, John P., Geigenberger, Peter, Nielsen, Kåre L., Visser, Richard G. F. and Bachem, Christian W. B.. (2008) Genes driving potato tuber initiation and growth : identification based on transcriptional changes using the POCI array. Functional & Integrative Genomics, Vol.8 (No.4). pp. 329-340. ISSN 1438-793X

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Zhang, Yi, Nikolovski, Nino, Sorieul, Mathias, Vellosillo, Tamara, McFarlane, Heather E., Dupree, Ray, Kesten, Christopher, Schneider, René, Driemeier, Carlos, Lathe, Rahul, Lampugnani, Edwin, Yu, Xiaolan, Ivakov, Alexander, Doblin, Monika S., Mortimer, Jenny C., Brown, Steven P., Persson, Staffan and Dupree, Paul. (2016) Golgi-localized STELLO proteins regulate the assembly and trafficking of cellulose synthase complexes in Arabidopsis. Nature Communications, 7 . 11656. ISSN 2041-1723

Zhou, Yu , Ryabov, Eugene V., Zhang, Xuemei and Hong, Yiguo . (2008) Influence of viral genes on the cell-to-cell spread of RNA silencing. Journal of Experimental Botany, Vol.59 (No.10). pp. 2803-2813. ISSN 0022-0957

Ó Lochlainn, Seosamh, Bowen, Helen C., Fray, R. G. , Hammond, John P., King, Graham J., White, Philip J., Graham, Neil S. and Broadley, Martin R.. (2011) Tandem quadruplication of HMA4 in the zinc (Zn) and cadmium (Cd) hyperaccumulator noccaea caerulescens. PL o S One, Vol.6 (No.3). e17814. ISSN 1932-6203

Book Item

Ghaffari, Reza, Zhang, Fu, Iliescu, Daciana, Hines, Evor, Leeson, Mark S. and Napier, R. (2011) The analysis of plant's organic volatiles compounds with electronic nose and pattern recognition techniques. In: Qahwaji, Rami, 1972- and Green, Roger, 1951- and Hines, Evor, 1957-, (eds.) Applied signal and image processing : multidisciplinary advancements. Hershey, PA: IGI Global, pp. 115-126. ISBN 9781609604776

Conference Item

Jafarnejadsani, Hamidreza, Kim, Jongmin, Hovakimyan, Naira and Kulkarni, Vishwesh V. (2016) Load capacity improvements in transcriptional systems using discrete-time L1-adaptive control. In: 8th International Workshop on Bio-Design Automation, Newcastle-upon-Tyne, UK, 16-18 Aug 2016. Published in: Proceedings of 8th International Workshop on Bio-Design Automation pp. 75-76.

Lessire, R., Cahoon, E., Chapman, K., Dyer, J., Eastmond, Peter J. and Heinz, E. (2009) Highlights of recent progress in plant lipid research. In: 18th Biennial International Symposium on Plant Lipids (ISPL), Bordeaux, France, 20-25 Jul 2008. Published in: Plant Physiology and Biochemistry, Vol.47 (No.6). pp. 443-447.

Matsoukas, Ioannis G., Thomas, Brian and Massiah, Andrea J. (2005) Μοριακή και φυσιολογική ανάλυση της άνθισης. In: 22ο Πανελλήνιο Συνέδριο Ελληνικής Εταιρείας Επιστήµης Οπωροκηπευτικών, Πάτρα, Ἑλλάς-Greece, 19-21 October 2005

Journal Item

Bruce, Gareth, Gu, Mei, Shi, Nongnong, Liu, Yule and Hong, Yiguo (2011) Influence of retinoblastoma-related gene silencing on the initiation of DNA replication by African cassava mosaic virus Rep in cells of mature leaves in Nicotiana benthamiana plants. Virology Journal, Vol.8 (No.1). p. 561. ISSN 1743-422X

Costa, Liliana M. and Gutierrez-Marcos, José F. (2008) Retinoblastoma makes its mark on imprinting in plants. Plos Biology, Vol.6 (No.8). pp. 1631-1633. ISSN 1544-9173

Habershon, Scott and Baker, Lewis A. (2017) Photosynthetic pigment-protein complexes as highly-connected networks : implications for robust energy transport. Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences, 473 (2201). ISSN 1364-5021

Thesis or Dissertation

Abbott, Aaron (2010) The isolation of flowering time genes from lettuce to enable the manipulation of bolting time. PhD thesis, University of Warwick.

Amnuaykan, Piyatida (2015) Environmental and genetic regulation of juvenility in Antirrhinum majus. PhD thesis, University of Warwick.

Arifin, Khaizurin T. (2013) Creating an orthogonal signalling pathway in S. cerevisiae. PhD thesis, University of Warwick.

Armitage, Andrew D. (2013) Alternaria alternata leaf spot pathogens : genetics, evolutionary history and diagnostics. PhD thesis, University of Warwick.

Atkinson, Laura Denise (2010) Genetic characterisation of post harvest spoilage in lettuce. PhD thesis, University of Warwick.

Bailey, Mark (Researcher in life sciences) (2014) An investigation into the role of SUMO proteases OVERLY TOLERANT to SALT1 and -2 in salicylic acid mediated defense signalling in Arabidopsis thaliana : toward understanding the role of SUMOylation in SA signalling. PhD thesis, University of Warwick.

Barnes, Christopher James (2014) Characterizing environmental, temporal and spatial scaling of Rhizosphere fungi in bioenergy crops : and their role in belowground carbon cycling. PhD thesis, University of Warwick.

Baroncelli, Riccardo (2012) Colletotrichum acutatum sensu lato : from diversity study to genome analysis. PhD thesis, University of Warwick.

Barrington, Christopher (2013) Epigenetic responses to environmental stress in plants. PhD thesis, University of Warwick.

Bateman, Perry James Dominic (2014) Nutrient translocation of offspring in plants. PhD thesis, University of Warwick.

Blair, G. Eric (1974) Protein synthesis in chloroplasts. PhD thesis, University of Warwick.

Burns, Caitlin A. (2014) Characterising the functional role of rhizosphere fungi in Miscanthus giganteus bioenergy cropping systems. PhD thesis, University of Warwick.

Burton, Frances (2016) Molecular basis of Serendipita indica mediated mutualism in plants. PhD thesis, University of Warwick.

Carroll, Charlotte Elizabeth Ella (2014) The importance of aquaporins in Arabidopsis thaliana germination and seedling establishment. PhD thesis, University of Warwick.

Carter, Anthony D. (2013) Cell-type specific comparative analysis of lateral root and nodule development at phenotypic and genomic levels. PhD thesis, University of Warwick.

Chappell, Lauren (2016) Characterisation of parsnip canker pathogens and identification of plant resistance. PhD thesis, University of Warwick.

Cooke, Emma J. (2013) Transcriptional analysis of the interaction between botrytis cinerea and a host arabidopsis thaliana using high-throughput data. PhD thesis, University of Warwick.

Davies, Lawrence O. (2013) The effect of non-UV light on crop protection product degradation and soil microbial community structure and function. PhD thesis, University of Warwick.

Di Benedetto, Sara (2011) The function of BET11, a trans-Golgi SNARE protein of Arabidopsis thaliana. PhD thesis, University of Warwick.

Durrant, Oliver (2009) Structural investigation of the Arabidopsis thaliana circadian clock. PhD thesis, University of Warwick.

Easterby-Smith, Sarah (2009) Cultivating commerce : connoisseurship, botany and the plant trade in London and Paris, c. 1760 – c. 1815. PhD thesis, University of Warwick.

Fairhead, Sebastian (2016) Translating genetics of oomycete resistance from Arabidopsis thaliana into Brassica production. PhD thesis, University of Warwick.

Gacek, K. (Katarzyna) (2013) Cell-cell communication in early developing seeds of Arabidopsis thaliana. PhD thesis, University of Warwick.

Grundy, Jack (2016) Control of environmental stress responses by the circadian clock and abscisic acid. PhD thesis, University of Warwick.

Gutaker, Rafał M. (2014) The genetic variation of cultivated flax (Linum usitatissimum L.) and the role of its wild ancestor (Linum bienne Mill.) in its evolution. PhD thesis, University of Warwick.

Harrison, Peter J. (2014) Biochemical investigations of the carotenoid cleavage dioxygenase enzyme family. PhD thesis, University of Warwick.

Harvey, Sarah (2013) The downy mildew effector HaRxL21 suppresses immune responses of Arabidopsis thaliana. PhD thesis, University of Warwick.

Hendry, Ruth Juliet (1995) Spatial modelling in plant ecology. PhD thesis, University of Warwick.

Hickman, Richard J. (2012) Transcriptional regulatory codes underlying Arabidopsis stress responses. PhD thesis, University of Warwick.

Hicks, Christine P. (2016) Transcriptional analysis of salt shock in Brassica oleracea. PhD thesis, University of Warwick.

Huang, Ziyue (2013) Characterisation of dormancy cycling responses to environmental signals in contrasting Arabidopsis thaliana ecotypes. PhD thesis, University of Warwick.

Hughes, Linda Karen (2009) A bioinformatic analysis of genes involved in stress responses in Arabidopsis thaliana. PhD thesis, University of Warwick.

Irvine, Michael Alastair (2014) Pattern formation and persistence in spatial plant ecology. PhD thesis, University of Warwick.

Issa, Reem Adnan (2010) Identification of glucosinolate profile in Brassica oleracea for quantitative trait locus mapping. PhD thesis, University of Warwick.

Jironkin, Aleksey (2013) Computational and experimental analysis of plant promoters : identifying functional elements. PhD thesis, University of Warwick.

Kerr, Gary W. (2013) The role of protein phosphatase PP2ACdc55 during meiosis in Saccharomyces cerevisiae. PhD thesis, University of Warwick.

Kiddle, Steven J. (2012) Using systems biology approaches to elucidate gene regulatory networks controlling the plant defence response. PhD thesis, University of Warwick.

Kirkham, Amy R. (2009) Global perspectives on the molecular ecology of photosynthetic picoeukaryotes. PhD thesis, University of Warwick.

Lagator, Mato (2012) Experimental evolution of herbicide resistance in chlamydomonas reinhardtii. PhD thesis, University of Warwick.

Law, Philip John (2013) Quantitative analysis of time-series microarray data, with application to investigating responses to environmental stresses in arabidopsis. PhD thesis, University of Warwick.

Lewis, Laura Ann (2012) Investigating the influence of phytopathogenic effectors upon host transcription. PhD thesis, University of Warwick.

Lewis, Mary C., Ph.D. (2011) The development of assays to determine the effect of environmental factors on the viability of Plasmodiophora brassicae resting spores. PhD thesis, University of Warwick.

Li, Chunyang (2011) Functional analysis of Arabidopsis Flowering locus T RNA and protein. PhD thesis, University of Warwick.

Li, Michael Kok Keng (2009) Quantitative analysis of chloroplast protein targeting. PhD thesis, University of Warwick.

Littlemore, James (1998) The ecological impact of recreation in British temperate woodlands. PhD thesis, University of Warwick.

Locke, James C. W. (2006) A systems biology approach to the Arabidopsis circadian clock. PhD thesis, University of Warwick.

Marshall, Eleanor Jane (2011) Molecular characterisation of small cysteine rich peptides during Arabidopsis thaliana seed development. PhD thesis, University of Warwick.

Matsoukas, Ioannis G. (2010) Genetic and physiological analysis of juvenility in plants. PhD thesis, University of Warwick.

McHattie, Stuart (2011) Modelling transcriptional networks in plant senescence. PhD thesis, University of Warwick.

Mendes, Ana T. (2011) Regulation of storage oil metabolism at the transcriptional level : filling and emptying Arabidopsis thaliana seeds. PhD thesis, University of Warwick.

Mohamed, Atef M. (2012) Targeting siRNA hotspots : a novel strategy for controlling viral diseases. PhD thesis, University of Warwick.

Nurika, Irnia (2013) Mechanisms of lignocellulosic conversion by the brown rot fungus serpula lacrymans. PhD thesis, University of Warwick.

O'Connell, Michael A. (2012) New methods for the study of physicochemical processes relevant to the agrochemicals industry. PhD thesis, University of Warwick.

Pateman, Cassandra Sophie Catherine (2002) RGS proteins and G protein signalling. PhD thesis, University of Warwick.

Polanski, Krzysztof (2015) Finding network modules and motifs regulating plant stress responses : integration and model-ling across multiple data sets. PhD thesis, University of Warwick.

Quareshy, Mussa (2016) Towards understanding chemical perception and selectivity for TIR1 and AFB5 auxin F-box receptor family members in Arabidopsis. PhD thesis, University of Warwick.

Rashid, Goran M. M. (2015) Discovery of novel lignin oxidizing enzymes from Sphingobacterium sp.T2. PhD thesis, University of Warwick.

Rashid, Md. Harun Ar (2016) Genetic regulation of daylength adaptation and bulb formation in onion (Allium cepa L.). PhD thesis, University of Warwick.

Rhodes, Johanna (2012) Identifying gene regulatory networks common to multiple plant stress responses. PhD thesis, University of Warwick.

Schafer, David Gerald (2013) Mechanisms underlying epigenetic gene silencing in maize. PhD thesis, University of Warwick.

Searle, Geoffrey Francis William (1969) Copper-proteins in photosynthesis. PhD thesis, University of Warwick.

Sgamma, Tiziana (2012) Regulation of juvenility in Antirrhinum majus. PhD thesis, University of Warwick.

Shepperd, Lindsey A. (2013) Role and regulation of the kinetochore protein Spc7 in fission yeast mitosis. PhD thesis, University of Warwick.

Smeeton, Rachel Clair (2010) An evaluation of the effects of over-production of ABA on whole plant water use, growth and productivity. PhD thesis, University of Warwick.

Smith, Madeleine Joy (2008) The biology and molecular biology of Polymyxa species and their interactions with plants and viruses. PhD thesis, University of Warwick.

Stoker, Claire (2016) Influence of the circadian clock on Arabidopsis defence against Botrytis cinerea. PhD thesis, University of Warwick.

Talbot, Adam R. (2014) Regulatory networks controlling ANAC092 expression during different stress responses in Arabidopsis thaliana. PhD thesis, University of Warwick.

Tock, Andrew J. (2017) Applying next-generation sequencing to enable marker-assisted breeding for adaptive traits in common bean (Phaseolus vulgaris L.). PhD thesis, University of Warwick.

Tolley, Nicholas Joseph (2010) Functional analysis of a reticulon protein from Arabidopsis thaliana. PhD thesis, University of Warwick.

Usher, Sarah Louise (2009) Nucleosome positioning in Arabidopsis. PhD thesis, University of Warwick.

Vladimirou, Elina (2010) Diffusion of proteins in chloroplast membranes. PhD thesis, University of Warwick.

Vágány, Viktória (2012) Characterisation of fusarium pathogens in the UK. PhD thesis, University of Warwick.

Weynberg, Karen Dawn (2009) Isolation and characterisation of novel viruses infecting marine phytoplankton. PhD thesis, University of Warwick.

Wibowo, Anjar Tri (2016) Epigenetic response and adaptation to salt stress in Arabidopsis thaliana. PhD thesis, University of Warwick.

Woodcock, Ailidh (2014) The effect of SUMOylation on DELLA proteins and abiotic stress responses in Arabidopsis thaliana. PhD thesis, University of Warwick.