Journal Article

Abuhammad, Areej, Fullam, Elizabeth, Bhakta, Sanjib, Russell, Angela, Morris, Garrett, Finn, Paul and Sim, Edith (2014) Exploration of piperidinols as potential antitubercular agents. Molecules, Volume 19 (Number 10). pp. 16274-16290. doi:10.3390/molecules191016274

Abuhammad, Areej, Fullam, Elizabeth, Lowe, Edward D., Staunton, David, Kawamura, Akane, Westwood, Isaac, Bhakta, Sanjib, Garner, Alun Christopher, Wilson, David L., Seden, Peter T., Davies, Stephen G., Russell, Angela J., Garman, Elspeth F. and Sim, Edith (2012) Piperidinols that show anti-tubercular activity as inhibitors of arylamine N-acetyltransferase: an essential enzyme for mycobacterial survival inside macrophages. PLoS One, Volume 7 (Number 12). Article number e52790. doi:10.1371/journal.pone.0052790

Achadu, Ojodomo J., Nwaji, Njemuwa, Lee, Dongkyu, Lee, Jaebeom, Akinoglu, Eser M., Giersig, Michael and Park, Enoch Y. (2022) 3D hierarchically porous magnetic molybdenum trioxide@gold nanospheres as a nanogap-enhanced Raman scattering biosensor for SARS-CoV-2. Nanoscale Advances, 4 (3). 871-883 . doi:10.1039/d1na00746g

Achtman, Mark (2011) A broad brush, global overview of bacterial sexuality. PLoS Genetics, Volume 7 (Number 8). Article number e1002255. doi:10.1371/journal.pgen.1002255

ATCC14028s Study Group (Including: Achtman, Mark, Van den Broeck, Frederik, Cooper, Kerry K., Lemey, Philippe, Parker, Craig T. and Zhou, Zhemin). (2021) Genomic population structure associated with repeated escape of Salmonella enterica ATCC14028s from the laboratory into nature. PLoS Genetics, 17 (9). e1009820. doi:10.1371/journal.pgen.1009820

Achtman, Mark, Wain, John, Weill, François-Xavier, Nair, Satheesh, Zhou, Zhemin, Sangal, Vartul, Krauland, Mary G., Hale, James L., Harbottle, Heather, Uesbeck, Alexandra, Dougan, Gordon, Harrison, Lee H. and Brisse, Sylvain (2012) Multilocus sequence typing as a replacement for serotyping in salmonella enterica. PLoS Pathogens, Volume 8 (Number 6). Article number e1002776. doi:10.1371/journal.ppat.1002776

Achtman, Mark, Zhou, Zhemin, Charlesworth, Jane and Baxter, Laura (2022) EnteroBase : Hierarchical clustering of 100,000s of bacterial genomes into species/sub-species and populations. Philosophical Transactions of the Royal Society B: Biological Sciences, 377 (1861). 20210240. doi:10.1098/rstb.2021.0240

Acman, Mislav, Wang, Ruobing, van Dorp, Lucy, Shaw, Liam P., Wang, Qi, Luhmann, Nina, Yin, Yuyao, Sun, Shijun, Chen, Hongbin, Wang, Hui and Balloux, Francois (2022) Role of mobile genetic elements in the global dissemination of the carbapenem resistance gene bla NDM. Nature Communications, 13 (1). 1131. doi:10.1038/s41467-022-28819-2

Adedokun, Sulaimon and Uthman, Olalekan A. (2020) Individual and contextual correlates of mosquito net use among women in Nigeria. Malaria Journal, 19 (1). 138. doi:10.1186/s12936-020-03219-3

Aggarwal, Surya D. , Lloyd, Adrian J., Yerneni, Saigopalakrishna S., Narciso, Ana Rita, Shepherd, Jennifer, Roper, David I., Dowson, Christopher G., Filipe, Sergio R and Hiller, N Luisa (2021) A molecular link between cell wall biosynthesis, translation fidelity, and stringent response in Streptococcus pneumoniae. Proceedings of the National Academy of Sciences of the United States of America, 118 (14). e2018089118. doi:10.1073/pnas.2018089118

Agoti, Charles N., Mwihuri, Alexander G., Sande, Charles J., Onyango, Clayton O., Medley, Graham, Cane, Patricia and Nokes, D. James (2012) Genetic relatedness of infecting and reinfecting respiratory syncytial virus strains identified in a birth cohort from rural Kenya. Journal of Infectious Diseases, Volume 206 (Number 10). pp. 1532-1541. doi:10.1093/infdis/jis570

Agoti, Charles N., Phan, My V. T., Munywoki, Patrick K., Githinji, George, Medley, Graham, Cane, Patricia A., Kellam, Paul, Cotton, Matthew and Nokes, D. James (2019) Genomic analysis of respiratory syncytial virus infections in households and utility in inferring who infects the infant. Scientific Reports, 9 . 10076. doi:10.1038/s41598-019-46509-w

Aguilo-Ferretjans, Maria del Mar, Bosch, Rafael, Puxty, Richard J., Latva, Mira, Zadjelovic, Vinko, Chhun, Audam, Sousoni, Despoina, Polin, Marco, Scanlan, David J. and Christie-Oleza, Joseph A. (2021) Pili allow dominant marine cyanobacteria to avoid sinking and evade predation. Nature Communications, 12 (1). 1857. doi:10.1038/s41467-021-22152-w

Agustika, Dyah K., Mercuriani, Ixora S., Purnomo, Chandra W., Hartono, Sedyo, Triyana, Kuwat, Iliescu, Doina D. and Leeson, Mark S. (2022) Fourier transform infrared spectrum pre-processing technique selection for detecting PYLCV-infected chilli plants. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, 278 . 121339. doi:10.1016/j.saa.2022.121339

Ahangar, Mohd Syed, Furze, Christopher M., Guy, Collette S., Cooper, Charlotte, Maskew, Kathryn S, Graham, Ben, Cameron, Alexander and Fullam, Elizabeth (2018) Structural and functional determination of homologs of the Mycobacterium tuberculosis N-acetylglucosamine-6-phosphate deacetylase (NagA). Journal of Biological Chemistry, 293 (25). pp. 9770-9783. doi:10.1074/jbc.RA118.002597

Ahlstrom, Christina, Muellner, Petra, Spencer, Simon E. F., Hong, Samuel, Saupe, Amy, Rovira, Albert, Hedberg, Craig, Perez, Andres, Muellner, Ulrich and Alvarez, Julio (2017) Inferring source attribution from a multi-year multi-source dataset of Salmonella in Minnesota. Zoonoses and Public Health, 64 (8). pp. 589-598. doi:10.1111/zph.12351

Ailloud, Florent, Didelot, Xavier, Woltemate, Sabrina, Pfaffinger, Gudrun, Overmann, Jörg, Bader, Ruth Christiane, Schulz, Christian, Malfertheiner, Peter and Suerbaum, Sebastian (2019) Within-host evolution of Helicobacter pylori shaped by niche-specific adaptation, intragastric migrations and selective sweeps. Nature Communications, 10 (1). 2273 . doi:10.1038/s41467-019-10050-1

Akbar, Rahmad, Bashour, Habib, Rawat, Puneet, Robert, Philippe A., Smorodina, Eva, Cotet, Tudor-Stefan, Flem-Karlsen, Karine, Frank, Robert, Mehta, Brij Bhushan, Vu, Mai Ha, Zengin, Talip, Gutierrez-Marcos, José F., Lund-Johansen, Fridtjof, Andersen, Jan Terje and Greiff, Victor (2022) Progress and challenges for the machine learning-based design of fit-for-purpose monoclonal antibodies. mAbs, 14 (1). 2008790. doi:10.1080/19420862.2021.2008790

Alam, Mohammad T., Amos, Gregory C. A., Murphy, Andrew, Murch, Simon, Wellington, E. M. H. and Arasaradnam, Ramesh P. (2020) Microbial imbalance in inflammatory bowel disease patients at different taxonomic levels. Gut Pathogens, 12 . 2020. doi:10.1186/s13099-019-0341-6

STREAM Consortium (Including: Alam, Mohammad T., Merlo, Maria E., Hodgson, D. A., Wellington, E. M. H., Takano, Eriko and Breitling, Rainer). (2010) Metabolic modeling and analysis of the metabolic switch in Streptomyces coelicolor. BMC Genomics, Vol.11 (No.202). p. 202. doi:10.1186/1471-2164-11-202

Alam, Mohammad Tauqee, Takano, Eriko and Breitling, Rainer (2011) Prioritizing orphan proteins for further study using phylogenomics and gene expression profiles in Streptomyces coelicolor. BMC Research Notes, 4 . p. 325. doi:10.1186/1756-0500-4-325

Alberti, Fabrizio, Leng, Daniel J., Wilkening, Ina, Song, Lijiang, Tosin, Manuela and Corre, Christophe (2019) Triggering the expression of a silent gene cluster from genetically intractable bacteria results in scleric acid discovery. Chemical Science, 10 (2). pp. 453-463. doi:10.1039/C8SC03814G

Albrithen, Hamad, Alzahrani, Khalid E., Assaifan, Abdulaziz K., Braim, Mona, Alshammari, Abeer and Alodhayb, Abdullah (2022) Utilizing photothermally induced oscillation damping parameters for the determination of bacterial load suspended in microfluidic resonators. Journal of King Saud University - Science, 34 (5). 102090. doi:10.1016/j.jksus.2022.102090

Alderwick, Luke J., Lloyd, Georgina S., Lloyd, Adrian, Lovering, Andrew L., Eggeling, L. and Besra, Gurdyal S. (2011) Biochemical characterization of the Mycobacterium tuberculosis phosphoribosyl-1-pyrophosphate synthetase. Glycobiology, Vol.21 (No.4). pp. 410-425. doi:10.1093/glycob/cwq173

Alenius, Suvi, Kajantie, Eero, Sund, Reijo, Nurhonen, Markku, Haaramo, Peija, Näsänen-Gilmore, Pieta, Vääräsmäki, Marja, Lemola, Sakari, Räikkönen, Katri, Schnitzlein, Daniel D., Wolke, Dieter, Gissler, Mika and Hovi, Petteri (2022) Risk-taking behavior of adolescents and young adults born preterm. The Journal of Pediatrics . doi:10.1016/j.jpeds.2022.09.032 (In Press)

Aletrari, Mina-Olga , McKibbin, Craig, Williams, Helen, Pawar, Vidya, Pietroni, Paola, Lord, Mike, Flitsch, Sabine L., Whitehead, Roger C., Swanton, Eileithyia, High, Stephen and Spooner, Robert A. (2011) Eeyarestatin 1 interferes with both retrograde and anterograde intracellular trafficking pathways. PLoS One, Vol.6 (No.7). e22713. doi:10.1371/journal.pone.0022713

Alhujaily, Muhanad Musaad M., Abbas, Hafsa, Xue, Mingzhan, de la Fuente, Alberto, Rabbani, Naila and Thornalley, Paul J. (2021) Studies of glyoxalase 1-linked multidrug resistance reveal glycolysis-derived reactive metabolite, methylglyoxal, is a common contributor in cancer chemotherapy targeting the spliceosome. Frontiers in Oncology, 11 . 748698. doi:10.3389/fonc.2021.748698

Ali, Adnan, Somfai, Ellák and Grosskinsky, Stefan (2012) Reproduction-time statistics and segregation patterns in growing populations. Physical Review E, Vol.85 (No.2). Article no. 021923. doi:10.1103/PhysRevE.85.021923

Ali, H. Raza, Dariush, Aliakbar, Provenzano, Elena, Bardwell, Helen, Abraham, Jean E., Iddawela, Mahesh, Vallier, Anne-Laure, Hiller, Louise, Dunn, Janet A., Bowden, Sarah J., Hickish, Tamas, McAdam, Karen, Houston, Stephen, Irwin, Mike J., Pharoah, Paul D. P., Brenton, James D., Walton, Nicholas A., Earl, Helena M. and Caldas, Carlos (2016) Computational pathology of pre-treatment biopsies identifies lymphocyte density as a predictor of response to neoadjuvant chemotherapy in breast cancer. Breast Cancer Research, 18 (1). 21. doi:10.1186/s13058-016-0682-8

Alix, Karine, Joets, Johann, Ryder, Carol D., Moore, Jonathan D., Barker, Guy C., Bailey, John P., King , Graham J. and Heslop-Harrison, J. (John) (2008) The CACTA transposon Bot1 played a major role in Brassica genome divergence and gene proliferation. Plant Journal, Vol.56 (No.6). pp. 1030-1044. doi:10.1111/j.1365-313X.2008.03660.x

Alobaid, Meshal A., Richards, Sarah-Jane, Alexander, Morgan R., Gibson, Matthew I. and Ghaemmaghami, Amir M. (2020) Developing immune-regulatory materials using immobilized monosaccharides with immune-instructive properties. Materials Today Bio, 8 . 100080. doi:10.1016/j.mtbio.2020.100080

Alpern, Steve, Bui, Thuy, Lidbetter, Thomas and Papadaki, Katerina (2022) Continuous patrolling games. Operations Research . doi:10.1287/opre.2022.2346 (In Press)

(2019) Effect of point-of-care C-reactive protein testing on antibiotic prescription in febrile patients attending primary care in Thailand and Myanmar : an open-label, randomised, controlled trial. The Lancet Global Health, 7 (1). E119-E131. doi:10.1016/S2214-109X(18)30444-3

Alves, Patrícia M., Al-Badi, Eide, Withycombe, Cathryn, Jones, Paul M, Purdy, Kevin J. and Maddocks, Sarah E. (2018) Interaction between Staphylococcus aureus and Pseudomonas aeruginosa is beneficial for colonisation and pathogenicity in a mixed-biofilm. Pathogens and disease, 76 (1). fty003. doi:10.1093/femspd/fty003

Amessou, Mohamed, Fradagrada, Alexandre, Falguières, Thomas, Lord, Mike, Smith, Daniel C., Roberts, L. M. (Lynne M.), Lamaze, Christophe and Johannes, Ludger (2007) Syntaxin 16 and syntaxin 5 are required for efficient retrograde transport of several exogenous and endogenous cargo proteins. Journal of Cell Science, Vol.120 (No.8). pp. 1457-1468. doi:10.1242/jcs.03436

Amin, Dina, Abolmaaty, Assem , Tolba, Sahar , Abdallah, Nagwa and Wellington, E. M. H. (2018) Phylogenic characteristics of a unique antagonistic micromonospora Sp. Rc5 to S. aureus isolated from Sinai Desert of Egypt. Annual Research & Review in Biology, 22 (2). pp. 1-15. doi:10.9734/ARRB/2018/38318

Amin, Munia, Kothamachu, Varun B., Feliu, Elisenda, Scharf, Birgit E., Porter, Steven L. and Soyer, Orkun S. (2014) Phosphate sink containing two-component signaling systems as tunable threshold devices. PLoS Computational Biology, Volume 10 (Number 10). Article number e1003890. doi:10.1371/journal.pcbi.1003890

Amos, Gregory C. A., Borsetto, Chiara, Laskaris, Paris, Krsek, Martin, Berry, Andrew E., Newsham, Kevin K., Calvo-Bado, Leo A., Pearce, David A., Vallin, Carlos and Wellington, E. M. H. (2015) Designing and implementing an assay for the detection of rare and divergent NRPS and PKS clones in European, Antarctic and Cuban soils. PLoS One, 10 (9). pp. 1-15. e0138327. doi:10.1371/journal.pone.0138327

Amos, Gregory C. A., Hawkey, P. M., Gaze, William H. and Wellington, E. M. H. (2014) Waste water effluent contributes to the dissemination of CTX-M-15 in the natural environment. Journal of Antimicrobial Chemotherapy, Volume 69 (Number 7). pp. 1785-1791. doi:10.1093/jac/dku079

Amos, Gregory C. A., Ploumakis, Semina, Zhang, Lihong, Hawkey, Peter M., Gaze, William H. and Wellington, E. M. H. (2018) The widespread dissemination of integrons throughout bacterial communities in a riverine system. The ISME Journal, 12 (3). pp. 681-691. doi:10.1038/s41396-017-0030-8

Amos, Gregory C. A., Sergaki, Chrysi, Logan, Alastair, Iriarte, Rolland, Bannaga, Ayman, Chandrapalan, Subashini, Wellington, Elizabeth M. H., Rijpkema, Sjoerd and Arasaradnam, Ramesh P. (2021) Exploring how microbiome signatures change across inflammatory bowel disease conditions and disease locations. Scientific Reports, 11 (1). 18699. doi:10.1038/s41598-021-96942-z

Andrawis, Alexsandra, Tapa, James, Vlaev, Ivo, Read, Daniel, Schmidtke, Kelly, Chow, Eric P. F., Lee, David, Fairley, Christopher K. and Ong, Jason J. (2022) Applying behavioural insights to HIV prevention and management : a scoping review. Current HIV/AIDS Reports . 10.1007/s11904-022. doi:10.1007/s11904-022-00615-z (In Press)

Anonye, Blessing (2018) Commentary : Bacteriophage transfer during faecal microbiota transplantation in Clostridium difficile infection is associated with treatment outcome. Frontiers in Cellular and Infection Microbiology, 8 . 104. doi:10.3389/fcimb.2018.00104

Anonye, Blessing (2016) General commentary on : alternatives to antibiotic growth promoters in animals. Frontiers in Veterinary Science, 3 . 74. doi:10.3389/fvets.2016.00074

Anonye, Blessing O., Nweke, Valentine, Furner-Pardoe, Jessica, Gabrilska, Rebecca, Rafiq, Afshan, Ukachukwu, Faith, Bruce, Julie, Lee, Christina, Unnikrishnan, Meera, Rumbaugh, Kendra P., Snyder, Lori A. S. and Harrison, Freya (2020) The safety profile of Bald’s eyesalve for the treatment of bacterial infections. Scientific Reports, 10 (1). 17513. doi:10.1038/s41598-020-74242-2

Ansell, T. Bertie, Curran, Luke, Horrell, Michael R., Pipatpolkai, Tanadet, Letham, Suzanne C., Song, Wanling, Siebold, Christian, Stansfeld, Phillip J., Sansom, Mark S. P. and Corey, Robin A. (2021) Relative affinities of protein–cholesterol interactions from equilibrium molecular dynamics simulations. Journal of Chemical Theory and Computation, 17 (10). pp. 6548-6558. doi:10.1021/acs.jctc.1c00547

Araújo, Carlos Leonardo de A., Dias, Larissa M., Veras, Adonney A. O., Alves, Jorianne T. C., Cavalcante, Ana Lídia Q., Dowson, Christopher G., Azevedo, Vasco, Ramos, Rommel T. J., Silva, Artur and Carneiro, Adriana R. (2016) Whole-genome sequence of Corynebacterium pseudotuberculosis 262 biovar equi isolated from cow milk. Genome Announcements, 4 (2). e00176. doi:10.1128/genomeA.00176-16

Armitage, Andrew D., Cockerton, Helen M., Sreenivasaprasad, Surapareddy, Woodhall, James, Lane, Charles R., Harrison, Richard J. and Clarkson, John P. (2020) Genomics evolutionary history and diagnostics of the Alternaria alternata Species group including apple and Asian pear pathotypes. Frontiers in Microbiology, 10 . 3124. doi:10.3389/fmicb.2019.03124

Armond, Jonathan W., Vladimirou, Elina, McAinsh, Andrew D. and Burroughs, Nigel John (2016) KiT : a MATLAB package for kinetochore tracking. Bioinformatics, 32 (12). pp. 1917-1919. doi:10.1093/bioinformatics/btw087

Arrieta, Jorge, Polin, Marco, Saleta-Piersanti, Ramon and Tuval, Idan (2019) Light control of localized photobioconvection. Physical Review Letters, 123 (15). 158101. doi:10.1103/PhysRevLett.123.158101

Asare‐Bediako, Elvis, Jones, Julie E. , Hambidge, Angela, Stevenson, Mark, Mead, Andrew, Jenner, Carol E. and Walsh, John A. (2020) The incidence of Turnip yellows virus in oilseed rape crops (Brassica napus L.) in three different regions of England over three consecutive growing seasons and the relationship with the abundance of flying Myzus persicae. Annals of Applied Biology, 176 (2). pp. 130-137. doi:10.1111/aab.12565

Ashraf, Neelma, Zafar, Sana, Makitrynskyy, Roman, Bechthold, Andreas, Spiteller, Dieter, Song, Lijiang, Anwar, Munir Ahmad, Luzhetskyy, Andriy, Khan, Ali Nisar, Akhtar, Kalsoom and Khaliq, Shazia (2022) Revealing genome-based biosynthetic potential of Streptomyces sp. BR123 isolated from sunflower rhizosphere with broad spectrum antimicrobial activity. Antibiotics, 11 (8). 1057. doi:10.3390/antibiotics11081057

Asiani, Karishma R., Williams, Huw, Bird, Louise, Jenner, Matthew, Searle, Mark S., Hobman, Jon L., Scott, David J. and Soultanas, Panos (2016) SilE is an intrinsically disordered periplasmic ‘molecular sponge' involved in bacterial silver resistance. Molecular Microbiology, 101 (5). pp. 731-742. doi:10.1111/mmi.13399

Atkins, Madison, Týč, Jiří, Shafiq, Shahaan, Ahmed, Manu, Bertiaux, Eloïse, De Castro Neto, Artur Leonel, Sunter, Jack, Bastin, Philippe, Dean, Samuel and Vaughan, Sue (2020) CEP164C regulates flagellum length in stable flagella. Journal of Cell Biology, 220 (1). e202001160. doi:10.1083/jcb.202001160

Auguste, Peter, Tsertsvadze, Alexander, Court, Rachel A. and Pink, Joshua (2016) A systematic review of economic models used to assess the cost-effectiveness of strategies for identifying latent tuberculosis in high-risk groups. Tuberculosis, 99 . pp. 81-91. doi:10.1016/j.tube.2016.04.007

Auguste, Peter, Tsertsvadze, Alexander, Pink, Joshua, Court, Rachel A., McCarthy, Noel D., Sutcliffe, P. (Paul) and Clarke, Aileen (2017) Comparing interferon-gamma release assays with tuberculin skin test for identifying latent tuberculosis infection that progresses to active tuberculosis : systematic review and meta-analysis. BMC Infectious Diseases, 17 (1). doi:10.1186/s12879-017-2301-4

Awofisayo-Okuyelu, A., Hall, I., Adak, G., Hawker, J. I., Abbott, Susan and McCarthy, Noel D. (2017) A systematic review and meta-analysis on the incubation period of Campylobacteriosis. Epidemiology and Infection, 145 (11). pp. 2241-2253. doi:10.1017/S0950268817001303

Awofisayo-Okuyelu, Adedoyin, Brainard, Julii, Hall, Ian and McCarthy, Noel D. (2019) Incubation period of Shiga-toxin producing Escherichia coli. Epidemiologic Reviews, 41 (1). pp. 121-129. doi:10.1093/epirev/mxz001

Awofisayo-Okuyelu, Adedoyin, Pratt, Adrian, McCarthy, Noel D. and Hall, Ian (2019) Within-host mathematical modelling of the incubation period of Salmonella Typhi. Royal Society Open Science, 6 (9). 182143. doi:10.1098/rsos.182143

Awofisayo-Okuyelu , Adedoyin , McCarthy, Noel D., Mgbakor , Ifunanya and Hall, Ian (2018) Incubation period of typhoidal salmonellosis : a systematic review and meta-analysis of outbreaks and experimental studies occurring over the last century. BMC Infectious Diseases, 18 . 483. doi:10.1186/s12879-018-3391-3

(2021) The etiology of pneumonia in HIV-uninfected children in Kilifi, Kenya : findings from the pneumonia etiology research for child health (PERCH) Study. The Pediatric infectious disease journal, 40 (9S). S29-S39. doi:10.1097/INF.0000000000002653

Babataheri, Avin, Roper, Marcus, Fermigier, Marc and Du Roure, Olivia (2011) Tethered fleximags as artificial cilia. Journal of Fluid Mechanics, Vol.678 . pp. 5-13. doi:10.1017/S002211201100005X

Badescu, George O., Marsh, Andrew, Smith, Timothy R., Thompson, Andrew J. and Napier, R. (Richard) (2016) Kinetic characterisation of a single chain antibody against the Hormone Abscisic Acid : comparison with its parental monoclonal. PLoS One, 11 (3). pp. 1-14. e0152148. doi:10.1371/journal.pone.0152148

Bai, Chenyao, Leeson, Mark S. and Higgins, Matthew D. (2014) Minimum energy channel codes for molecular communications. Electronics Letters, 50 (23). pp. 1669-1671. doi:10.1049/el.2014.3345

Bai, Chenyao, Leeson, Mark S. and Higgins, Matthew D. (2015) Performance of SW-ARQ in bacterial quorum communications. Nano Communication Networks, Volume 6 (Number 1). pp. 3-14. doi:10.1016/j.nancom.2014.11.001

Bai, Chenyao, Leeson, Mark S., Higgins, Matthew D. and Lu, Yi (2016) Throughput and energy efficiency based packet size optimization of ARQ protocols in bacterial quorum communications. Transactions on Emerging Telecommunications Technologies, 27 (8). pp. 1128-1143. doi:10.1002/ett.3055

Bailo, Rebeca, Radhakrishnan, Anjana, Singh, Albel, Nakaya, Makoto, Fujiwara, Nagatoshi and Bhatt, Apoorva (2022) The mycobacterial desaturase DesA2 is associated with mycolic acid biosynthesis. Scientific Reports, 12 (1). 6943. doi:10.1038/s41598-022-10589-y

Baker, Alexander N., Muguruza, Asier R., Richards, Sarah‐Jane, Georgiou, Panagiotis G., Goetz, Stephen, Walker, Marc, Dedola, Simone, Field, Robert A. and Gibson, Matthew I. (2022) Lateral flow glyco‐assays for the rapid and low‐cost detection of lectins–polymeric linkers and particle engineering are essential for selectivity and performance. Advanced Healthcare Materials, 11 (4). 2101784. doi:10.1002/adhm.202101784

Baldwin, Adam, Loughlin, Michael, Dr., Caubilla-Barron, Juncal, Kucerova, Eva, Manning, Georgina, Dowson, Christopher G. and Forsythe, S. J. (Steve J.) (2009) Multilocus sequence typing of Cronobacter sakazakii and Cronobacter malonaticus reveals stable clonal structures with clinical significance which do not correlate with biotypes. BMC Microbiology, Vol.9 (Article 223). doi:10.1186/1471-2180-9-223

Baltrus, David A., Nishimura, Marc T., Dougherty, Kevin M., Biswas, Surojit, Mukhtar, M. Shahid, Vicente, Joana G., Holub, E. B. and Dangl, J. L. (Jeffery L.) (2012) The molecular basis of host specialization in bean pathovars of Pseudomonas syringae. Molecular Plant-Microbe Interactions, Vol.25 (No.7). pp. 877-888. doi:10.1094/MPMI-08-11-0218

Barber, Thomas M., Kabisch, S., Pfeiffer, A. F. and Weickert, Martin O. (2020) The health benefits of dietary fibre. Nutrients, 12 (10). 3209. doi:10.3390/nu12103209

(2020) Diversity of HLA Class I and Class II blocks and conserved extended haplotypes in Lacandon Mayans. Scientific Reports, 10 (1). 3248. doi:10.1038/s41598-020-58897-5

Bass, David, van der Gast, Christopher, Thomson, Serena K., Neuhauser, Sigrid, Hilton, Sally and Bending, G. D. (2018) Plant rhizosphere selection of plasmodiophorid lineages from bulk soil : the importance of “hidden” diversity. Frontiers in Microbiology, 9 . 168. doi:10.3389/fmicb.2018.00168

Bathe, Stephan and Hausner, Martina (2006) Design and evaluation of 16S rRNA sequence based oligonucleotide probes for the detection and quantification of Comamonas testosteroni in mixed microbial communities. BMC Microbiology, Vol.6 (No.54). doi:10.1186/1471-2180-6-54

Batson, Sarah, Rea, Dean, Fülöp, Vilmos and Roper, David I. (2010) Crystallization and preliminary X-ray analysis of a D-alanyl-D-alanine ligase (EcDdlB) from Escherichia coli. Journal of Experimental Psychology: Human Perception and Performance, Vol.66 (No.4). pp. 405-408. doi:10.1107/S1744309110003970

Batson, Sarah, de Chiara, Cesira, Majce, Vita, Lloyd, Adrian J., Gobec, Stanislav, Rea, Dean, Fülöp, Vilmos, Thoroughgood, Christopher W., Simmons, Katie J., Dowson, Christopher G., Fishwick, Colin W. G., de Carvalho, Luiz Pedro S. and Roper, David I. (2017) Inhibition of D-Ala : D-Ala ligase through a phosphorylated form of the antibiotic D-cycloserine. Nature Communications, 8 (1). 1939 . doi:10.1038/s41467-017-02118-7

Baxter, Laura, Roy, Proyash, Picot, Emma, Watts, Jess, Jones, Alexandra M., Wilkinson, Helen, Schäfer, Patrick, Gifford, Miriam L. and Lagunas, Beatriz (2021) Comparative genomics across three ensifer species using a new complete genome sequence of the Medicago symbiont Sinorhizobium (Ensifer) meliloti WSM1022. Microorganisms, 9 (12). 2428. doi:10.3390/microorganisms9122428

(2015) Molecular analysis of asymptomatic bacteriuria Escherichia coli strain VR50 reveals adaptation to the urinary tract by gene acquisition. Infection and Immunity, Volume 83 (Number 5). pp. 1749-1764. doi:10.1128/IAI.02810-14

Becher, Paul G., Verschut, Vasiliki, Bibb, Maureen J., Bush, Matthew J., Molnár, Béla P., Barane, Elisabeth, Al-Bassam, Mahmoud M., Chandra, Govind, Song, Lijiang, Challis, Gregory L., Buttner, Mark J. and Flärdh, Klas (2020) Developmentally regulated volatiles geosmin and 2-methylisoborneol attract a soil arthropod to Streptomyces bacteria promoting spore dispersal. Nature microbiology, 5 . pp. 821-829. doi:10.1038/s41564-020-0697-x

Benarroch, Jonatan M. and Asally, Munehiro (2020) The microbiologist’s guide to membrane potential dynamics. Trends in Microbiology, 28 (4). pp. 304-314. doi:10.1016/j.tim.2019.12.008

Berg, Hugo van den , Molina-Paris, Carmen and Sewell, Andrew K. (2011) Specific T-cell activation in an unspecific T-cell repertoire. Science Progress, Vol.94 (No.3). pp. 245-264. doi:10.3184/003685011X13139280383942

Bi, Dadi, Almpanis, Apostolos, Noel, Adam, Deng, Yansha and Schober, Robert (2021) A survey of molecular communication in cell biology : establishing a new hierarchy for interdisciplinary applications. IEEE Communications Surveys & Tutorials, 23 (3). pp. 1494-1545. doi:10.1109/COMST.2021.3066117

Blanc-Mathieu, Romain, Verhelst, Bram, Derelle, Evelyne, Rombauts, Stephane, Bouget, François-Yves , Carré, Isabelle A., Château, Annie, Eyre-Walker, Adam, Grimsley, Nigel, Moreau, Hervé, Piégu, Benoit, Rivals, Eric , Schackwitz, Wendy, Peer, Yves van de and Piganeau, Gwenaël (2014) An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies. BMC Genomics, Volume 15 . pp. 1-11. Article number 1103. doi:10.1186/1471-2164-15-1103

Blindauer, Claudia A. (2015) Advances in the molecular understanding of biological zinc transport. Chemical Communications, 51 (22). pp. 4544-4563. doi:10.1039/c4cc10174j

Boden, Rich, Cleland, David, Green, Peter N., Katayama, Yoko, Uchino, Yoshihito, Murrell, J. C. (J. Colin) and Kelly, Donovan P. (2011) Phylogenetic assessment of culture collection strains of Thiobacillus thioparus, and definitive 16S rRNA gene sequences for T. thioparus, T. denitrificans, and Halothiobacillus neapolitanus. Archives of Microbiology, Vol.194 (No.3). pp. 187-195. doi:10.1007/s00203-011-0747-0

Boden, Rich, Thomas, Elizabeth, Savani, Parita, Kelly, Donovan P. and Wood, Ann P. (2008) Novel methylotrophic bacteria isolated from the River Thames (London, UK). Environmental Microbiology , Vol.10 (No.12). pp. 3225-3236. doi:10.1111/j.1462-2920.2008.01711.x

Boltze, Johannes and Perez-Pinzon, Miguel A. (2022) Focused update on stroke neuroimmunology : current progress in preclinical and clinical research and recent mechanistic insight. Stroke, 53 (5). pp. 1432-1437. doi:10.1161/STROKEAHA.122.039005

Borsetto, Chiara, Amos, Gregory C. A., da Rocha, Ulisses Nunes, Mitchell, Alex L., Finn, Robert D., Laidi, Rabah Forar, Vallin, Carlos, Pearce, David A., Newsham, Kevin K. and Wellington, E. M. H. (2019) Microbial community drivers of PK/NRP gene diversity in selected global soils. Microbiome, 7 (1). 78. doi:10.1186/s40168-019-0692-8

Bottomley, C., Otiende, M., Uyoga, S., Gallagher, K., Kagucia, E. W., Etyang, A. O., Mugo, D., Gitonga, J., Karanja, H., Nyagwange, J., Adetifa, I. M. O., Agweyu, A., Nokes, D. J., Warimwe, G. M. and Scott, J. A. G. (2021) Quantifying previous SARS-CoV-2 infection through mixture modelling of antibody levels. Nature Communications, 12 . 6196. doi:10.1038/s41467-021-26452-z

Brabec, Viktor, Howson, Suzanne E., Kaner, Rebecca A., Lord, Rianne M., Malina, Jaroslav, Phillips, Roger M., Abdallah, Qasem M. A., McGowan, Patrick C., Rodger, Alison and Scott, Peter (2013) Metallohelices with activity against cisplatin-resistant cancer cells : does the mechanism involve DNA binding? Chemical Science, Volume 4 (Number 12). pp. 4407-4416. doi:10.1039/c3sc51731d

Bramham, Lawrence E., Wang, Tongtong, Higgins, Erin E., Parkin, Isobel A. P., Barker, Guy C. and Walsh, John A. (2022) Characterization and mapping of retr04, retr05 and retr06 broad-spectrum resistances to Turnip mosaic virus in Brassica juncea, and the development of robust methods for utilizing recalcitrant genotyping data. Frontiers in Plant Science, 12 . doi:10.3389/fpls.2021.787354

(2021) COVID-19 transmission dynamics underlying epidemic waves in Kenya. Science, 374 (6570). pp. 989-994. doi:10.1126/science.abk0414

Brandizzi, Federica, Frigerio, Lorenzo, Howell, Stephen H. and Schäfer, Patrick (2014) Endoplasmic reticulum : shape and function in stress translation. Frontiers in Plant Science, Volume 5 . pp. 1-2. doi:10.3389/fpls.2014.00425

Brettin, Thomas S. (Thomas Scott), Altherr, Michael R., Du, Ying, Mason, Roxie M., Friedrich, Alexandra, Potter, Laura, Langford, Chris, Keller, Thomas J., Jens, Jason, Howie, Heather, Weyand, Nathan J., Clary, Susan, Prichard, Kimberley, Wachocki, Susi, Sodergren, Erica, Dillard, Joseph P., Dillard, George, So, Magdalene and Grove Arvidson , Cindy (2005) Expression capable library for studies of Neisseria gonorrhoeae, version 1.0. BMC Microbiology, Vol.5 (No.50). doi:10.1186/1471-2180-5-50

Brignall, Ruth, Cauchy, Pierre, Bevington, Sarah L., Gorman, Bethany, Pisco, Angela O., Bagnall, James, Boddington, Christopher, Rowe, William, England, Hazel, Rich, Kevin, Schmidt, Lorraine, Dyer, Nigel P., Travis, Mark A., Ott, Sascha, Jackson, Dean A., Cockerill, Peter N. and Paszek, Pawel (2017) Integration of kinase and calcium signaling at the level of chromatin underlies inducible gene activation in T cells. The Journal of Immunology, 199 (8). pp. 2652-2667. ji1602033. doi:10.4049/jimmunol.1602033

Brodel, Andreas K., Jaramillo, Alfonso and Isalan, Mark (2017) Intracellular directed evolution of proteins from combinatorial libraries based on conditional phage replication. Nature Protocols, 12 (9). pp. 1830-1843. doi:10.1038/nprot.2017.084

Brown, Jason L., Townsend, Eleanor, Short, Robert D., Williams, Craig A., Woodall, Chris, Nile, Christopher J. and Ramage, Gordon (2022) Assessing the inflammatory response to in vitro polymicrobial wound biofilms in a skin epidermis model. npj Biofilms and Microbiomes, 8 (1). 19. doi:10.1038/s41522-022-00286-z

Brumley, Douglas R., Wan, Kirsty Y., Polin, Marco and Goldstein, Raymond E. (2014) Flagellar synchronization through direct hydrodynamic interactions. eLife, Volume 3 . Article number e02750. doi:10.7554/eLife.02750

Bryan, Samantha J., Burroughs, Nigel John, Evered, Carol, Sacharz, Joanna, Nenninger, Anja, Mullineaux, Conrad W. and Spence, Edward M. (2011) Loss of the SPHF homologue Slr1768 leads to a catastrophic failure in the maintenance of thylakoid membranes in synechocystis sp. PCC 6803. PLoS One, Vol.6 (No.5). e19625. doi:10.1371/journal.pone.0019625

Bryan, Samantha J., Burroughs, Nigel John, Shevela, Dmitriy, Yu, Jianfeng, Rupprecht, Eva, Liu, Lu-Ning, Mastroianni, Giulia, Xue, Quan, Llorente-Garcia, Isabel, Leake, Mark C., Eichacker, Lutz A., Schneider, Dirk, Nixon, Peter J. and Mullineaux, Conrad W. (2014) Localisation and interactions of the Vipp1 protein in cyanobacteria. Molecular Microbiology, Volume 94 (Number 5). pp. 1179-1195. doi:10.1111/mmi.12826

(2020) Structure of dual BON-domain protein DolP identifies phospholipid binding as a new mechanism for protein localisation. eLife, 9 . e62614. doi:10.7554/eLife.62614

Bugg, Tim, Rodolis, Maria T., Mihalyi, Agnes and Jamshidi, Shirin (2016) Inhibition of phospho-MurNAc-pentapeptide translocase (MraY) by nucleoside natural product antibiotics, bacteriophage <phi>X174 lysis protein E, and cationic antibacterial peptides. Bioorganic and Medicinal Chemistry . doi:10.1016/j.bmc.2016.03.018

Burt, Alister, Cassidy, C. Keith, Stansfeld, Phillip J. and Gutsche, Irina (2021) Alternative architecture of the E. coli chemosensory array. Biomolecules, 11 (4). e495. doi:10.3390/biom11040495

Buskirk, Amanda D., Ndungo, Esther, Shimanovich, Avital A., Lam, Diana, Blackwelder, William C., Ikumapayi, Usman N., Ma, Bing, Powell, Helen, Antonio, Martin, Nataro, James P., Kaper, James B., Pasetti, Marcela F. and Huffnagle, Gary B. (2022) Mucosal immune profiles associated with diarrheal disease severity in shigella - and enteropathogenic escherichia coli-infected children enrolled in the global enteric multicenter study. mBio, 13 (4). doi:10.1128/mbio.00538-22

Byrne, Lisa, Dallman, Timothy J., Adams, Natalie, Mikhail, Amy F. W., McCarthy, Noel D. and Jenkins, Claire (2018) Highly pathogenic clone of Shiga toxin–producing Escherichia coli O157:H7, England and Wales. Emerging Infectious Diseases , 24 (12). pp. 2303-2308. doi:10.3201/eid2412.180409

Byrne-Bailey, K. G., Gaze, William H., Kay, Paul, Boxall, Alistair B.A. , Hawkey, P. M. and Wellington, E. M. H. (2009) Prevalence of sulfonamide resistance genes in bacterial isolates from manured agricultural soils and pig slurry in the United Kingdom. Antimicrobial Agents and Chemotherapy, Vol.53 (No.2). pp. 696-702. doi:10.1128/AAC.00652-07

Byrne-Bailey, K. G., Gaze, William H., Zhang, Lihong, Kay, Paul, Boxall, Alistair B.A. , Hawkey, P. M. and Wellington, E. M. H. (2011) Integron prevalence and diversity in manured soil. Applied and Environmental Microbiology, Vol.77 (No.2). pp. 684-687. doi:10.1128/AEM.01425-10

Cabello-Yeves, Pedro J., Callieri, Cristiana, Picazo, Antonio, Schallenberg, Lena, Huber, Paula, Roda-Garcia, Juan J., Bartosiewicz, Maciej, Belykh, Olga I., Tikhonova, Irina V., Torcello-Requena, Alberto, De Prado, Paula Martin, Puxty, Richard J., Millard, Andrew D., Camacho, Antonio, Rodriguez-Valera, Francisco and Scanlan, David J. (2022) Elucidating the picocyanobacteria salinity divide through ecogenomics of new freshwater isolates. BMC Biology, 20 . 175. doi:10.1186/s12915-022-01379-z

Cabello-Yeves, Pedro J., Scanlan, David J. , Callieri, Cristiana, Picazo, Antonio, Schallenberg, Lena, Huber, Paula, Roda-Garcia, Juan J., Bartosiewicz, Maciej, Belykh, Olga I., Tikhonova, Irina V., Torcello-Requena, Alberto, De Prado, Paula Martin, Millard, Andrew D., Camacho, Antonio, Rodriguez-Valera, Francisco and Puxty, Richard J. (2022) α-cyanobacteria possessing form IA RuBisCO globally dominate aquatic habitats. The ISME Journal, 16 . pp. 2421-2432. doi:10.1038/s41396-022-01282-z

Calvo-Bado, Leo A., Green, Laura E., Medley, Graham, Ul-Hassan, Atiya, Buller, Nicky B., Kaler, Jasmeet, Russell, Claire L., Kennan, Ruth M., Rood, Julian I., Wellington, E. M. H. and Grogono-Thomas, Rosemary (2010) Detection and diversity of a putative novel heterogeneous polymorphic proline-glycine repeat (Pgr) protein in the footrot pathogen Dichelobacter nodosus. Veterinary Microbiology, Vol.147 (No.3-4). pp. 358-366. doi:10.1016/j.vetmic.2010.06.024

Cama, J., Leszczynski, R., Tang, P. K., Khalid, A., Lok, V., Dowson, Christopher G. and Ebata, A. (2021) To push or to pull? In a post-COVID world, supporting and incentivizing antimicrobial drug development must become a governmental priority. ACS Infectious Diseases, 7 (8). pp. 2029-2042. doi:10.1021/acsinfecdis.0c00681

Campbell, Kate, Vowinckel, Jakob, Mülleder, Michael, Malmsheimer, Silke, Lawrence, Nicola, Calvani, Enrica, Miller-Fleming, Leonor, Alam, Mohammad T., Christen, Stefan, Keller, Markus A. and Ralser, Markus (2015) Self-establishing communities enable cooperative metabolite exchange in a eukaryote. eLife, 4 . e09943.

Cappuccio, Francesco and Siani, Alfonso (2020) Covid-19 and cardiovascular risk : susceptibility to infection to SARS-CoV-2, severity and prognosis of Covid-19 and blockade of the renin-angiotensin-aldosterone system. An evidence-based viewpoint. Nutrition, Metabolism and Cardiovascular Diseases, 30 (8). pp. 1227-1235. doi:10.1016/j.numecd.2020.05.013

Carbonero, Franck, Oakley, Brian B. and Purdy, Kevin J. (2014) Metabolic flexibility as a major predictor of spatial distribution in microbial communities. PLoS One, Volume 9 (Number 1). Article number e85105. doi:10.1371/journal.pone.0085105

Carroll, Daire, Holden, Nicola, Gifford, Miriam L. and Dupuy, Lionel X. (2020) Framework for quantification of the dynamics of root colonization by pseudomonas fluorescens isolate SBW25. Frontiers in Microbiology, 11 . doi:10.3389/fmicb.2020.585443

Casillo, Angela, Fabozzi, Antonio, Russo Krauss, Irene, Parrilli, Ermenegilda, Biggs, Caroline I., Gibson, Matthew I., Lanzetta, Rosa, Appavou, Marie-Sousai, Radulescu, Aurel, Tutino, Maria L., Paduano, Luigi and Corsaro, Maria M. (2021) Physicochemical approach to understanding the structure, conformation, and activity of mannan polysaccharides. Biomacromolecules, 22 (4). pp. 1445-1457. doi:10.1021/acs.biomac.0c01659

Castel, Baptiste, Fairhead, Sebastian, Furzer, Oliver J., Redkar, Amey, Wang, Shanshan, Cevik, Volkan, Holub, E. B. and Jones, Jonathan D. G. (2021) Evolutionary trade‐offs at the Arabidopsis WRR4A resistance locus underpin alternate Albugo candida race recognition specificities. The Plant Journal, 107 (5). pp. 1490-1502. doi:10.1111/tpj.15396

Castro, Thiago L. P., Seyffert, Nubia, Ramos, Rommel T. J., Barbosa, Silvanira, Carvalho, Rodrigo D. O., Pinto, Anne Cybelle, Carneiro, Adriana Ribeiro, Silva, Wanderson Marques, Pacheco, Luis G. C., Downson, Christopher G., Schneider, Maria P. C., Miyoshi, Anderson, Azevedo, V. (Vasco) and Silva, Artur (2013) Ion torrent-based transcriptional assessment of a Corynebacterium pseudotuberculosis equi strain reveals denaturing high-performance liquid chromatography a promising rRNA depletion method. Microbial Biotechnology, Volume 6 (Number 2). pp. 168-177. doi:10.1111/1751-7915.12020

Catherwood, Anita C., Lloyd, Adrian J., Tod, Julie A., Chauhan, Smita, Slade, Susan E., Walkowiak, Grzegorz P., Galley, Nicola F., Punekar, Avinash S., Smart, Katie, Rea, Dean, Evans, Neil D., Chappell, Michael J., Roper, David I. and Dowson, Christopher G. (2020) Substrate and stereochemical control of peptidoglycan cross-linking by transpeptidation by Escherichia coli PBP1B. Journal of the American Chemical Society, 142 (11). pp. 5034-5048. doi:10.1021/jacs.9b08822

Cavaliere, Matteo, Feng, Song, Soyer, Orkun S. and Jiménez, José I. (2017) Cooperation in microbial communities and their biotechnological applications. Environmental Microbiology, 19 (8). pp. 2949-2963. doi:10.1111/1462-2920.13767

Cevik, Volkan, Boutrot, Freddy, Apel, Wiebke, Robert-Seilaniantz, Alexandre, Furzer, Oliver J., Redkar, Amey, Castel, Baptiste, Kover, Paula, Prince, David C., Holub, E. B. and Jones, Jonathan D. G. (2019) Transgressive segregation reveals mechanisms of Arabidopsis immunity to Brassica-infecting races of white rust (Albugo candida). Proceedings of the National Academy of Sciences, 116 (7). pp. 2767-2773. doi:10.1073/pnas.1812911116

(2022) Comparative genomics of disease and carriage serotype 1 pneumococci. Genome Biology and Evolution, 14 (4). evac052. doi:10.1093/gbe/evac052

Challis, Gregory L. (2008) Mining microbial genomes for new natural products and biosynthetic pathways. Microbiology, Vol.154 (No.6). pp. 1555-1569. doi:10.1099/mic.0.2008/018523-0

Chamberlain, Kerry L., Marshall, Richard S., Jolliffe, Nicholas A., Frigerio, Lorenzo, Ceriotti, Aldo, Lord, Mike and Roberts, L. M. (Lynne M.) (2008) Ricin B chain targeted to the endoplasmic reticulum of tobacco protoplasts is degraded by a CDC48- and vacuole-independent mechanism. Journal of Biological Chemistry, Vol.283 (No.48). pp. 33276-33286. doi:10.1074/jbc.M805222200

Chan, Helena, Taib, Najwa, Gilmore, Michael C., Mohamed, Ahmed M. T., Hanna, Kieran, Luhur, Johana, Nguyen, Hieu, Hafiz, Elham, Cava, Felipe, Gribaldo, Simonetta, Rudner, David and Rodrigues, Christopher D. A. (2022) Genetic screens identify additional genes implicated in envelope remodeling during the engulfment stage of Bacillus subtilis sporulation. mBio . doi:10.1128/mbio.01732-22 (In Press)

Chan, Jacqueline, Millard, Andrew D., Mann, Nicholas H. and Schäfer, Hendrik (2014) Comparative genomics defines the core genome of the growing N4-like phage genus and identifies N4-like Roseophage specific genes. Frontiers in Microbiology, Volume 5 . Article number 506. doi:10.3389/fmicb.2014.00506

Chan, Yi-Wah, Millard, Andrew D., Wheatley, Peter J., Holmes, Antony B., Mohr, Remus, Whitworth, Anna L., Mann, Nicholas H., Larkum, Anthony W. D., Hess, Wolfgang R., Scanlan, David J. and Clokie, Martha R. J. (2015) Genomic and proteomic characterization of two novel siphovirus infecting the sedentary facultative epibiont cyanobacteriumAcaryochloris marina. Environmental Microbiology, 17 (11). pp. 4239-4252. doi:10.1111/1462-2920.12735

Chan, Yi-Wah, Millard, Andrew D., Wheatley, Peter J., Holmes, Antony B., Mohr, Remus, Whitworth, Anna L., Mann, Nicholas H., Larkum, Anthony W. D., Hess, Wolfgang R., Scanlan, David J. and Clokie, Martha R. J. (2015) Genomic and proteomic characterization of two novel siphovirus infecting the sedentary facultative epibiont cyanobacterium Acaryochloris marina. Environmental Microbiology, 17 (11). pp. 4239-4252. doi:10.1111/1462-2920.12735

Chen, Jing and Gu, Ji-Dong (2017) Faunal burrows alter the diversity, abundance, and structure of AOA, AOB, anammox and n-damo communities in coastal mangrove sediments. Microbial Ecology, 74 (1). pp. 140-156. doi:10.1007/s00248-017-0939-5

Chen, Jing, Wade, Matthew J., Dolfing, Jan and Soyer, Orkun S. (2019) Increasing sulfate levels show a differential impact on synthetic communities comprising different methanogens and a sulfate reducer. Journal of The Royal Society Interface, 16 (154). 20190129. doi:10.1098/rsif.2019.0129

Chen, Yin, McAleer, Kathryn L. and Murrell, J. C. (J. Colin) (2010) Monomethylamine as a nitrogen source for a nonmethylotrophic bacterium, Agrobacterium tumefaciens. Applied and Environmental Microbiology, Vol.76 (No.12). pp. 4102-4104. doi:10.1128/AEM.00469-10

Chen, Yin, Patel, Nisha A., Crombie, Andrew, Scrivens, James H. and Murrell, J. C. (J. Colin) (2011) Bacterial flavin-containing monooxygenase is trimethylamine monooxygenase. Proceedings of the National Academy of Sciences, Vol.108 (No.43). pp. 17791-17796. doi:10.1073/pnas.1112928108

Cherkasov, Nikolay, Ibhadon, A. O. and Fitzpatrick, P. (2015) A review of the existing and alternative methods for greener nitrogen fixation. Chemical Engineering and Processing: Process Intensification, 90 . pp. 24-33. doi:10.1016/j.cep.2015.02.004

Christie-Oleza, Joseph Alexander and Armengaud, Jean (2010) In-depth analysis of exoproteomes from marine bacteria by shotgun liquid chromatography-tandem mass spectrometry : the Ruegeria pomeroyi DSS-3 case-study. Marine Drugs, Volume 8 (Number 8). pp. 2223-2239. doi:10.3390/md8082223

Christie-Oleza, Joseph Alexander, Armengaud, Jean, Guerin, Philippe and Scanlan, David J. (2015) Functional distinctness in the exoproteomes of marine Synechococcus. Environmental Microbiology, 17 (10). pp. 3781-3794. doi:10.1111/1462-2920.12822

Christie-Oleza, Joseph Alexander, Miotello, Guylaine and Armengaud, Jean (2012) High-throughput proteogenomics of Ruegeria pomeroyi : seeding a better genomic annotation for the whole marine Roseobacter clade. BMC Genomics, Volume 13 (Number 1). Article number 73. doi:10.1186/1471-2164-13-73

Christie-Oleza, Joseph Alexander, Nogales, Balbina, Martín-Cardona, Cèlia, Lanfranconi, Mariana P., Albertí, Sebastián, Lalucat, Jorge and Bosch, Rafael (2008) ISPst9, an ISL3-like insertion sequence from Pseudomonas stutzeri AN10 involved in catabolic gene inactivation. International Microbiology, Volume 11 (Number 2). pp. 101-110. doi:10.2436/20.1501.01.49

Christie-Oleza, Joseph Alexander, Scanlan, David J. and Armengaud, Jean (2015) “You produce while I clean up”, a strategy revealed by exoproteomics during Synechococcus-Roseobacter interactions. Proteomics, 15 (20). pp. 3454-3462. doi:10.1002/pmic.201400562

Christie-Oleza, Joseph Alexander, Sousoni, Despoina, Lloyd, Matthew, Armengaud, Jean and Scanlan, David J. (2017) Nutrient recycling facilitates long-term stability of marine microbial phototroph–heterotroph interactions. Nature microbiology, 2 . 17100. doi:10.1038/nmicrobiol.2017.100

Cizmeci, Deniz, Dempster, Emma L., Champion, Olivia L., Wagley, Sariqa, Akman, Ozgur E., Prior, Joann L., Soyer, Orkun S., Mill, Jonathan and Titball, Richard W. (2016) Mapping epigenetic changes to the host cell genome induced by Burkholderia pseudomallei reveals pathogen-specific and pathogen-generic signatures of infection. Scientific Reports, 6 . 30861. doi:10.1038/srep30861

Clarkson, John P., Staveley, John, Phelps, Kath, Young, Caroline and Whipps, J. M. (2003) Ascospore release and survival in Sclerotinia sclerotiorum. Mycological Research, Vol.10 (No.2). pp. 213-222. doi:10.1017/S0953756203007159

Clement, Mathew, Knezevic, L., Dockree, Tamsin, McLaren, J. E., Ladell, Kristin, Miners, K. L., Llewelly-Lacey, S., Rubina, A., Francis, O., Cole, D. K., Sewell, A. K., Bridgeman, J. S., Price, David A., van den Berg, H. A. and Wooldridge, Linda (2021) CD8 coreceptor-mediated focusing can reorder the agonist hierarchy of peptide ligands recognized via the T cell receptor. Proceedings of the National Academy of Sciences of the United States of America, 118 (29). e2019639118. doi:10.1073/pnas.2019639118

Clifton, Rachel, Giebel, Katharina, Liu, Nicola, Purdy, Kevin J. and Green, Laura E. (2019) Sites of persistence of Fusobacterium necrophorum and Dichelobacter nodosus: a paradigm shift in understanding the epidemiology of footrot in sheep. Scientific Reports, 9 (1). 14429. doi:10.1038/s41598-019-50822-9

Clifton, Rachel, Green, Laura E. and Purdy, Kevin J. (2018) Development and validation of a multiple locus variable number tandem repeat analysis (MLVA) scheme for Fusobacterium necrophorum. Veterinary Microbiology, 213 . pp. 108-113. doi:10.1016/j.vetmic.2017.11.017

Clokie, Martha R. J., Millard, Andrew D., Mehta, Jaytry Y. and Mann, Nicholas H. (2006) Virus isolation studies suggest short-term variations in abundance in natural cyanophage populations of the Indian Ocean. Journal of the Marine Biological Association of the United Kingdom, Vol.86 (No.3). pp. 499-505. doi:10.1017/S0025315406013415

Cody, Alison J., McCarthy, Noel D., Bray, James E., Wimalarathna, Helen M. L., Colles, Frances M., van Rensburg, Melissa J., Dingle, Kate E., Waldenström, Jonas and Maiden, Martin C. J. (2015) Wild bird-associated Campylobacter jejuni isolates are a consistent source of human disease, in Oxfordshire, United Kingdom. Environmental Microbiology Reports, 7 (5). pp. 782-788. doi:10.1111/1758-2229.12314

Congdon, Thomas R., Dean, Bethany T., Kasperczak-Wright, James, Biggs, Caroline I., Notman, Rebecca and Gibson, Matthew I. (2015) Probing the biomimetic ice nucleation inhibition activity of poly(vinyl alcohol) and comparison to synthetic and biological polymers. Biomacromolecules, 16 (9). pp. 2820-2826. 150810155641002. doi:10.1021/acs.biomac.5b00774

Conley, Michaela J., Short, Judith M., Burns, Andrew M., Streetley, James, Hutchings, Joshua, Bakker, Saskia, Power, B. Joanne, Jaffery, Hussain, Haney, Joanne, Zanetti, Giulia, Murcia, Pablo R., Stewart, Murray, Fearns, Rachel, Vijayakrishnan, Swetha and Bhella, David (2022) Helical ordering of envelope‐associated proteins and glycoproteins in respiratory syncytial virus. The EMBO Journal, 41 (3). e109728. doi:10.15252/embj.2021109728

Connelly, Erin, Del Genio, Charo I., Harrison, Freya and Nacy, Carol A. (2020) Data mining a medieval medical text reveals patterns in ingredient choice that reflect biological activity against infectious agents. mBio, 11 (1). e03136-19. doi:10.1128/mBio.03136-19

(2016) What’s in a name? Species-wide whole-genome sequencing resolves invasive and noninvasive lineages of salmonella enterica serotype Paratyphi B. mBio, 7 (4). e00527-16. doi:10.1128/mBio.00527-16

Cook, Sarah, Price, Oliver, King, Andrew, Finnegan, Chris, van Egmond, Roger, Schäfer, Hendrik, Pearson, Jonathan M., Abolfathi, Soroush and Bending, G. D. (2020) Bedform characteristics and biofilm community development interact to modify hyporheic exchange. Science of The Total Environment, 749 . 141397. doi:10.1016/j.scitotenv.2020.141397

(2022) Molecular and cellular insight into Escherichia coli SslE and its role during biofilm maturation. npj Biofilms and Microbiomes, 8 (1). 9. doi:10.1038/s41522-022-00272-5

Cosgriff, Sarah, Chintakayala, Kiran, Chim, Ya Tsz A., Chen, Xinyong, Allen, Stephanie (Researcher in Pharmacy), Lovering, Andrew L. and Grainger, David C. (2010) Dimerization and DNA-dependent aggregation of the Escherichia coli nucleoid protein and chaperone CbpA. Molecular Microbiology, Volume 77 (Number 5). pp. 1289-1300. doi:10.1111/j.1365-2958.2010.07292.x

Couper, Keith, Taylor-Phillips, Sian, Grove, Amy L., Freeman, Karoline, Osokogu, Osemeke, Court, Rachel A., Mehrabian, Amin, Morley, Peter T., Nolan, Jerry P., Soar, Jasmeet and Perkins, Gavin D. (2020) COVID-19 in cardiac arrest and infection risk to rescuers : a systematic review. Resuscitation, 151 . pp. 59-66. doi:10.1016/j.resuscitation.2020.04.022

Courtenay, Orin, Reilly, L. A., Keeling, Matthew James, Sweeney, F. P., Wellington, E. M. H., Macdonald, David W., Delahay, Richard J., Wilson, G. J. and Cheeseman, C. L. (2007) Performance of an environmental test to detect Mycobacterium bovis infection in badger social groups. Veterinary Record, The, Vol.161 . pp. 817-818. doi:10.1136/vr.161.24.817

Couto, Daniel, Niebergall, Roda, Liang, Xiangxiu, Bücherl, Christoph A., Sklenar, Jan, Macho, Alberto P., Ntoukakis, Vardis, Derbyshire, Paul, Altenbach, Denise, Maclean, Dan, Robatzek, Silke, Uhrig, Joachim, Menke, Frank, Zhou, Jian-Min and Zipfel, Cyril (2016) The Arabidopsis protein phosphatase PP2C38 negatively regulates the central immune kinase BIK1. PLoS Pathogens, 12 (8). e1005811. doi:10.1371/journal.ppat.1005811

Coverdale, James P. C., Guy, Collette S., Bridgewater, Hannah E., Needham, Russell J., Fullam, Elizabeth and Sadler, Peter J. (2021) Osmium–arene complexes with high potency towards Mycobacterium tuberculosis. Metallomics, 13 (4). mfab007. doi:10.1093/mtomcs/mfab007

Cox, M. J. and Medley, Graham (2003) Serological survey of anti-group A rotavirus IgM in UK adults. Epidemiology and Infection, Vol.131 (No.1). pp. 719-726. doi:10.1017/S0950268803008720

Cox, Michael J., Schäfer, Hendrik, Nightingale, Phillip D., McDonald, Ian R. and Murrell, J. C. (J. Colin) (2012) Diversity of methyl halide-degrading microorganisms in oceanic and coastal waters. FEMS Microbiology Letters, Vol.334 (No.2). pp. 111-118. doi:10.1111/j.1574-6968.2012.02624.x

Crellen, Thomas, Pi, Li, Davis, Emma L., Pollington, Timothy M., Lucas, Tim C. D., Ayabina, Diepreye, Borlase, Anna, Toor, Jaspreet, Prem, Kiesha, Medley, Graham F., Klepac, Petra and Hollingsworth, T. Déirdre (2021) Dynamics of SARS-CoV-2 with waning immunity in the UK population. Philosophical Transactions of the Royal Society B: Biological Sciences, 376 (1829). doi:10.1098/rstb.2020.0274

Cremin, Kelsey , Jones, Bryn, Teahan, James, Meloni, Gabriel N., Perry, David, Zerfass, Christian, Asally, Munehiro, Soyer, Orkun S. and Unwin, Patrick R. (2020) Scanning ion conductance microscopy reveals differences in the ionic environments of gram-positive and negative bacteria. Analytical Chemistry, 92 (24). pp. 16024-16032. doi:10.1021/acs.analchem.0c03653

Cresswell, R., Augustin, D., Bouros, I., Farm, H. J., Miao, S., Ahern, A., Robinson, M., Lemenuel-Diot, A., Gavaghan, D. J., Lambert, B. and Thompson, Robin N. (2022) Heterogeneity in the onwards transmission risk between local and imported cases affects practical estimates of the time-dependent reproduction number. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 380 (2233). 20210308. doi:10.1098/rsta.2021.0308

Criscuolo, Alexis, Issenhuth-Jeanjean, Sylvie, Didelot, Xavier, Thorell, Kaisa, Hale, James, Parkhill, Julian, Thomson, Nicholas R., Weill, François-Xavier, Falush, Daniel and Brisse, Sylvain (2019) The speciation and hybridization history of the genus Salmonella. Microbial Genomics, 5 (8). doi:10.1099/mgen.0.000284

Crispin, Max, Chang, Veronica T., Harvey, David J., Dwek, Raymond A., Evans, Edward J., Stuart, David I., Jones, E. Yvonne, Lord, Mike, Spooner, Robert A. and Davis, Simon J. (2009) A human embryonic kidney 293T cell line mutated at the Golgi -mannosidase II locus. Journal of Biological Chemistry . doi:10.1074/jbc.M109.006254

Crispin, Max, Harvey, David J., Bitto, David, Bonomelli, Camille, Edgeworth, Matthew, Scrivens, James H., Huiskonen, Juha T. and Bowden, Thomas A. (2014) Structural plasticity of the Semliki Forest virus glycome upon interspecies transmission. Journal of proteome research, Volume 13 (Number 3). pp. 1702-1712. doi:10.1021/pr401162k

Crispin, Max, Harvey, David J., Bitto, David, Bonomelli, Camille, Edgeworth, Matthew, Scrivens, James H., Huiskonen, Juha T. and Bowden, Thomas A. (2014) Structural plasticity of the semliki forest virus glycome upon interspecies transmission. Journal of proteome research, Volume 13 (Number 3). pp. 1702-1712. doi:10.1021/pr401162k

Cui, L. L., Boltze, Johannes and Zhang, Y. (2021) Positive LGI1 antibodies in CSF and relapse relate to worse outcome in anti-LGI1 encephalitis. Frontiers in Immunology, 12 . 772096. doi:10.3389/fimmu.2021.772096

Cunliffe, Michael, Whiteley, Andrew S., Newbold, Lindsay, Oliver, Anna, Schäfer, Hendrik and Murrell, J. C. (J. Colin) (2009) Comparison of bacterioneuston and bacterioplankton dynamics during a phytoplankton bloom in a fjord mesocosm. Applied and Environmental Microbiology, Vol.75 (No.22). pp. 7173-7181. doi:10.1128/AEM.01374-09

Curran, Fraser M., Bhalraam, U., Mohan, Mohapradeep, Singh, Jagdeep S., Anker, Stefan D., Dickstein, Kenneth, Doney, Alexander S., Filippatos, Gerasimos, George, Jacob, Metra, Marco, Ng, Leong L., Palmer, Colin N., Samani, Nilesh J., Veldhuisen, Dirk J., Voors, Adriaan A., Lang, Chim C. and Mordi, Ify R. (2021) Neutrophil‐to‐lymphocyte ratio and outcomes in patients with new‐onset or worsening heart failure with reduced and preserved ejection fraction. ESC Heart Failure, 8 (4). pp. 3168-3179. doi:10.1002/ehf2.13424

Daga, Sunil, Babu, Adarsh, Khovanova, Natasha and Higgins, Rob (2021) Defining clinically pathogenic HLA-specific antibodies - granular details in characteristics in pre and early time following HLA-antibody incompatible kidney transplantation. OBM Transplantation, 5 (3). 20. doi:10.21926/obm.transplant.2103151

Dankwa, Emmanuelle A., Lambert, Sébastien, Hayes, Sarah, Thompson, Robin N. and Donnelly, Christl A. (2022) Stochastic modelling of African swine fever in wild boar and domestic pigs : epidemic forecasting and comparison of disease management strategies. Epidemics, 40 . 100622. doi:10.1016/j.epidem.2022.100622

Darlington, Alexander P. S., Kim, Juhyun, Jiménez, José I. and Bates, Declan (2018) Dynamic allocation of orthogonal ribosomes facilitates uncoupling of co-expressed genes. Nature Communications, 9 (1). 695. doi:10.1038/s41467-018-02898-6

Davies, Sarah K., Fearn, Sarah, Allsopp, Luke P., Harrison, Freya, Ware, Ecaterina, Diggle, Stephen P., Filloux, Alain, McPhail, David S. and Bundy, Jacob G. (2017) Visualizing antimicrobials in bacterial biofilms : three-dimensional biochemical imaging using TOF-SIMS. mSphere, 2 (4). 2:e00211-17. doi:10.1128/mSphere.00211-17

Dedman, Craig J., King, Aaron M, Christie-Oleza, Joseph Alexander and Davies, Gemma-Louise (2021) Environmentally relevant concentrations of titanium dioxide nanoparticles pose negligible risk to marine microbes. Environmental Science: Nano, 8 (5). pp. 1236-1255. doi:10.1039/d0en00883d

Delattre, Hadrien, Chen, Jing, Wade, Matthew J. and Soyer, Orkun S. (2020) Thermodynamic modelling of synthetic communities predicts minimum free energy requirements for sulfate reduction and methanogenesis. Journal of The Royal Society Interface, 17 (166). 20200053. doi:10.1098/rsif.2020.0053

Deme, Justin C., Johnson, Steven, Vickery, Owen N., Muellbauer, Amy, Monkhouse, Holly, Griffiths, Thomas, Hennell James, Rory, Berks, Ben C., Coulton, James W., Stansfeld, Phillip J. and Lea, Susan M. (2020) Structures of the stator complex that drives rotation of the bacterial flagellum. Nature microbiology, 5 . pp. 1553-1564. doi:10.1038/s41564-020-0788-8

Dhaonoa, Gurneet K., Kushnir, Inbar, Qimron, Udi, Roper, David I. and Sagona, Antonia P. (2022) Investigating the effect of bacteriophages on bacterial FtsZ localisation. Frontiers in Cellular and Infection Microbiology-Microbiome in Health and Disease, 12 . 863712. doi:10.3389/fcimb.2022.863712

Dhok, Shivani, Chouhan, Lokendra, Noel, Adam and Sharma, Prabhat (2022) Cooperative molecular communication in drift-induced diffusive cylindrical channel. IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, 8 (1). pp. 44-55. doi:10.1109/TMBMC.2021.3089939

Didelot, Xavier, Bowden, Rory, Street, Teresa, Golubchik, Tanya, Spencer, Chris, McVean, Gil, Sangal, Vartul, Anjum, Muna F., Achtman, Mark, Falush, Daniel and Donnelly, Peter (2011) Recombination and population structure in salmonella enterica. PLoS Genetics, Volume 7 (Number 7). Article number e1002191. doi:10.1371/journal.pgen.1002191

Didelot, Xavier, Urwin, Rachel, Maiden, Martin C. J. and Falush, Daniel (2009) Genealogical typing of Neisseria meningitidis. Microbiology, Vol.15 (No.10). pp. 3176-3186. doi:10.1099/mic.0.031534-0

Dimmock, N. J. (2021) COVID-19 infection, vaccines, and immunity—the antibody response requires detailed analysis. Microbiology Research, 12 (3). pp. 626-629. doi:10.3390/microbiolres12030044

Dimude, Juachi U., Stein, Monja, Andrzejewska, Ewa E., Khalifa, Mohammad S., Gajdosova, Alexandra, Retkute, Renata, Skovgaard, Ole and Rudolph, Christian J. (2018) Origins left, right, and centre : increasing the number of initiation sites in the escherichia coli chromosome. Genes, 9 (8). 376. doi:10.3390/genes9080376

Dingle, Kate E., Didelot, Xavier, Quan, T. Phuong, Eyre, David W., Stoesser, Nicole, Marwick, Charis A., Coia, John, Brown, Derek, Buchanan, Sarah, Ijaz, Umer Z., Goswami, Cosmika, Douce, Gill, Fawley, Warren N., Wilcox, Mark H., Peto, Timothy E. A., Walker, A. Sarah, Crook, Derrick W. and Keim, Paul (2019) A role for tetracycline selection in recent evolution of agriculture-associated clostridium difficile PCR ribotype 078. mBio, 10 (2). pp. 1-19. e02790. doi:10.1128/mBio.02790-18

Diniz-da-Costa, Maria, Kong, Chow-Seng, Fishwick, Katherine, Rawlings, Thomas, Brighton, Paul (Paul J.), Hawkes, Amelia, Odendaal, Joshua, Quenby, Siobhan, Ott, Sascha, Lucas, Emma S., Vrljicak, Pavle and Brosens, Jan J. (2021) Characterization of highly proliferative decidual precursor cells during the window of implantation in human endometrium. Stem Cells, 39 (8). pp. 1067-1080. doi:10.1002/stem.3367

Ditlev, Jonathon A., Vega, Anthony R., Köster, Darius Vasco, Su, Xiaolei, Tani, Tomomi, Lakoduk, Ashley M., Vale, Ronald D., Mayor, Satyajit, Jaqaman, Khuloud and Rosen, Michael K. (2019) A composition-dependent molecular clutch between T cell signaling condensates and actin. eLife, 8 . e42695 . doi:10.7554/eLife.42695

Diviney, Sinéad, Tuplin, Andrew, Struthers, Madeleine, Armstrong, Victoria, Elliott, Richard M., Simmonds, Peter and Evans, David J. (2008) A hepatitis C virus cis-acting replication element forms a long-range RNA-RNA interaction with upstream RNA sequences in NS5B. Journal of Virology, Vol.82 (No.18). pp. 9008-9022. doi:10.1128/JVI.02326-07

Dixon, Ann M. and Roy, Syamal (2019) Role of membrane environment and membrane-spanning protein regions in assembly and function of the Class II Major Histocompatibility complex. Human Immunology, 80 (1). pp. 5-14. doi:10.1016/j.humimm.2018.07.004

Dixon, Emma V., Claridge, Jolyon K., Harvey, David J., Baruah, Kavitha, Yu, Xiaojie, Vesiljevic, Snezana, Mattick, Susan, Pritchard, Laura K., Krishna, Benjamin, Scanlan, Christopher N., Schnell, Jason R., Higgins, Matthew K., Zitzmann, Nicole and Crispin, Max (2014) Fragments of bacterial endoglycosidase S and immunoglobulin G reveal subdomains of each that contribute to deglycosylation. Journal of Biological Chemistry, Volume 289 (Number 20). pp. 13876-13889. doi:10.1074/jbc.M113.532812

Docherty, Sophia J., Davis, Oliver S. P., Haworth, Claire M. A., Plomin, Robert, D'Souza, Ursula and Mill, Jonathan (2012) A genetic association study of DNA methylation levels in the DRD4 gene region finds associations with nearby SNPs. Behavioral and Brain Functions, Volume 8 . Article number 31. doi:10.1186/1744-9081-8-31

Dong, Haohao, Xiang, Quanju, Gu, Yinghong, Wang, Zhongshan, Paterson, Neil G., Stansfeld, Phillip J., He, Chuan, Zhang, Yizheng, Wang, Wenjian and Dong, Changjiang (2014) Structural basis for outer membrane lipopolysaccharide insertion. Nature, 511 (7507). pp. 52-56. doi:10.1038/nature13464

Dorati, Federico, Barrett, Glyn, Sanchez-Contreras, Maria, Arseneault, Tanya, José, Mateo, Studholme, David, Murillo, Jesús, Caballero, Primitivo, Waterfield, Nicholas R., Arnold, Dawn, Shaw, Liz and Jackson, Robert (2018) Coping with environmental eukaryotes : identification of Pseudomonas syringae genes during the interaction with alternative hosts or predators. Microorganisms, 6 (2). 32. doi:10.3390/microorganisms6020032

Dorp, Lucy van, Wang, Qi, Shaw, Liam P., Acman, Mislav, Brynildsrud, Ola B., Eldholm, Vegard, Wang, Ruobing, Gao, Hua, Yin, Yuyao, Chen, Hongbin, Ding, Chuling, Farrer, Rhys A., Didelot, Xavier, Balloux, Francois and Wang, Hui (2019) Rapid phenotypic evolution in multidrug-resistant Klebsiella pneumoniae hospital outbreak strains. Microbial Genomics, 5 (4). doi:10.1099/mgen.0.000263

(2020) Evolutionary mechanisms of long-term genome diversification associated with niche partitioning in marine picocyanobacteria. Frontiers in Microbiology, 11 . 567431. doi:10.3389/fmicb.2020.567431

Dow, Claire E., Berg, Hugo van den, Roper, David I. and Rodger, Alison (2015) Biological insights from a simulation model of the critical FtsZ accumulation required for prokaryotic cell division. Biochemistry, 54 (24). pp. 3803-3813. doi:10.1021/acs.biochem.5b00261

Dowson, Amanda J., Lloyd, Adrian J., Cuming, Andrew C., Roper, David I., Frigerio, Lorenzo and Dowson, Christopher G. (2022) Plant peptidoglycan precursor biosynthesis : conservation between moss chloroplasts and Gram-negative bacteria. Plant Physiology, 190 (1). pp. 165-179. doi:10.1093/plphys/kiac176

Drayson, Mark T., Bowcock, Stella, Planche, Tim, Iqbal, Gulnaz, Pratt, Guy, Yong, Kwee, Wood, Jill, Raynes, Kerry, Higgins, Helen, Dawkins, Bryony, Meads, David, Hulme, Claire T., Whittaker, Anna C., Hawkey, Peter, Low, Eric and Dunn, Janet A. (2019) Prophylactic levofloxacin to prevent infections in newly diagnosed symptomatic myeloma: the TEAMM RCT. Health Technology Assessment, 23 (62). pp. 1-94. doi:10.3310/hta23620

Drenichev, Mikhail S., Bennett, Mark, Novikov, Roman A., Mansfield, John, Smirnoff, Nick, Grant, Murray R. and Mikhailov, Sergey N. (2019) A role for 3′-O-β-D-ribofuranosyladenosine in altering plant immunity. Phytochemistry Letters, 157 . pp. 128-134. doi:10.1016/j.phytochem.2018.10.016

Drevinek, Pavel, Baldwin, Adam, Dowson, Christopher G. and Mahenthiralingam, Eshwar (2008) Diversity of the parB and repA genes of the Burkholderia cepacia complex and their utility for rapid identification of Burkholderia cenocepacia. BMC Microbiology, Vol.8 (No.44). doi:10.1186/1471-2180-8-44

Drummond, Sheona P., Hildyard, John, Firczuk, Helena, Reamtong, Onrapak, Li, Ning, Kannambath, Shichina, Claydon, Amy J., Beynon, R. J. (Robert J.), Eyers, Claire E. and McCarthy, John E. G. (2011) Diauxic shift-dependent relocalization of decapping activators Dhh1 and Pat1 to polysomal complexes. Nucleic Acids Research, Vol.39 (No.17). pp. 7764-7774. doi:10.1371/journal.pone.0023630

Du Lac, Melchior, Scarpelli, Andrew H., Younger, Andrew K. D., Bates, Declan and Leonard, Joshua N. (2017) Predicting the dynamics and heterogeneity of genomic DNA content within bacterial populations across variable growth regimes. ACS Synthetic Biology, 6 (7). pp. 1131-1139. doi:10.1021/acssynbio.5b00217

Dulong, S., Huang, Qi, Innominato, P. F., Karaboue, A., Bouchahda, M., Pruvost, A., Théodoro, F., Agrofoglio, L. A., Adam, R., Finkenstädt, Bärbel and Lévi, Francis A. (2021) Circadian and chemotherapy-related changes in urinary modified nucleosides excretion in patients with metastatic colorectal cancer. Scientific Reports, 11 (1). 24015. doi:10.1038/s41598-021-03247-2

Durighello, Emie, Christie-Oleza, Joseph Alexander and Armengaud, Jean (2014) Assessing the exoproteome of marine bacteria, lesson from a RTX-Toxin abundantly secreted by Phaeobacter strain DSM 17395. PLoS One, Volume 9 (Number 2). Article number e89691. doi:10.1371/journal.pone.0089691

Durr, Julius, Reyt, Guilhem, Spaepen, Stijn, Hilton, Sally, Meehan, Cathal, Qi, Wu, Kamiya, Takehiro, Flis, Paulina, Dickinson, Hugh G., Feher, Attila, Shivshankar, Umashankar, Pavagadhi, Shruti, Swarup, Sanjay, Salter, David, Bending, G. D. and Gutierrez-Marcos, José F. (2021) A novel signaling pathway required for Arabidopsis endodermal root organization shapes the Rhizosphere microbiome. Plant and Cell Physiology, 62 (2). pp. 248-261. doi:10.1093/pcp/pcaa170

Dutta, Ritaban, Hines, Evor, Gardner, J. W. and Boilot, Pascal (2002) Bacteria classification using Cyranose 320 electronic nose. BioMedical Engineering OnLine, Vol.1 (No.4). doi:10.1186/1475-925X-1-4

D’Amore, Rosalinda, Ijaz, Umer Zeeshan, Schirmer, Melanie, Kenny, John G., Gregory, Richard, Darby, Alistair C., Shakya, Migun, Podar, Mircea, Quince, Christopher and Hall, Neil (2016) A comprehensive benchmarking study of protocols and sequencing platforms for 16S rRNA community profiling. BMC Genomics, 17 (1). doi:10.1186/s12864-015-2194-9

Eagar, Andrew C., Mushinski, Ryan, Horning, Amber L., Smemo, Kurt A., Phillips, Richard P. and Blackwood, Christopher B. (2022) Arbuscular mycorrhizal tree communities have greater soil fungal diversity and relative abundances of saprotrophs and pathogens than ectomycorrhizal tree communities. Applied and Environmental Microbiology, 88 (1). e01782. doi:10.1128/AEM.01782-21

(2013) Esperanto for histones : CENP-A, not CenH3, is the centromeric histone H3 variant. Chromosome Research, Volume 21 (Number 2). pp. 101-106. doi:10.1007/s10577-013-9347-y

Ebruke, Chinelo, Roca, Anna, Egere, Uzochukwu, Darboe, Ousainou, Hill, Philip C., Greenwood, Brian (Brian A.), Wren, Brendan, Adegbola, Richard A. and Antonio, Martin (2015) Temporal changes in nasopharyngeal carriage of Streptococcus pneumoniaeserotype 1 genotypes in healthy Gambians before and after the 7-valent pneumococcal conjugate vaccine. PeerJ PrePrints, Volume 3 . Article number e903. doi:10.7717/peerj.903

Ehibhatiomhan, Austine O., Rahmanpour, Rahman, Farnaud, Sebastien, Bugg, Timothy D. H. and Mendel-Williams, Sharon (2023) Periplasmic expression of Pseudomonas fluorescens peroxidase Dyp1B and site-directed mutant Dyp1B enzymes enhances polymeric lignin degradation activity in Pseudomonas putida KT2440. Enzyme & Microbial Technology, 162 . 110147. doi:10.1016/j.enzmictec.2022.110147

Eikenes, Åsmund H., Malerød, Lene, Christensen, Anette Lie, Steen, Chloé B., Mathieu, Juliette, Nezis, Ioannis P., Liestøl, Knut, Huynh, Jean-René, Stenmark, H. and Haglund, Kaisa (2015) ALIX and ESCRT-III coordinately control cytokinetic abscission during germline stem cell division in vivo. PLoS Genetics, Volume 11 (Number 1). pp. 1-7. Article number e1004904. doi:10.1371/journal.pgen.1004904

El Ghachi, Meriem, Howe, Nicole, Huang, Chia-Ying, Olieric, Vincent, Warshamanage, Rangana, Touzé, Thierry, Weichert, Dietmar, Stansfeld, Phillip J., Wang, Meitian, Kerff, Fred and Caffrey, Martin (2018) Crystal structure of undecaprenyl-pyrophosphate phosphatase and its role in peptidoglycan biosynthesis. Nature Communications, 9 (1). 1078 . doi:10.1038/s41467-018-03477-5

Elashry, Abdelnaser, Okumoto, Sakiko, Siddique, Shahid, Koch, Wolfgang, Kreil, David and Bohlmann, Holger (2013) The AAP gene family for amino acid permeases contributes to development of the cyst nematode Heterodera schachtii in roots of Arabidopsis. Plant Physiology and Biochemistry, Volume 70 . pp. 379-386. doi:10.1016/j.plaphy.2013.05.016

Elliott, Charles M., Stinner, Björn and Venkataraman, Chandrasekhar (2012) Modelling cell motility and chemotaxis with evolving surface finite elements. Journal of The Royal Society Interface, Volume 9 (Number 76). pp. 3027-3044. doi:10.1098/rsif.2012.0276

Erdos, Zoltan, Chandler, Dave, Bass, Chris and Raymond, Ben (2021) Controlling insecticide resistant clones of the aphid, Myzus persicae, using the entomopathogenic fungus Akanthomyces muscarius : fitness cost of resistance under pathogen challenge. Pest Management Science, 77 (11). pp. 5286-5293. doi:10.1002/ps.6571

España, Mingrelia, Rasche, Frank, Kandeler, Ellen, Brune, Thomas, Rodriguez, Belkys, Bending, G. D. and Cadisch, G. (Georg) (2011) Assessing the effect of organic residue quality on active decomposing fungi in a tropical Vertisol using 15N-DNA stable isotope probing. Fungal Ecology, Vol.4 (No.1). pp. 115-119. doi:10.1016/j.funeco.2010.09.005

Eyice, Özge and Schäfer, Hendrik (2016) Culture-dependent and culture-independent methods reveal diverse methylotrophic communities in terrestrial environments. Archives of Microbiology, 198 (1). pp. 17-26. doi:10.1007/s00203-015-1160-x

Eyre, David W., Didelot, Xavier, Buckley, Anthony M., Freeman, Jane, Moura, Ines B., Crook, Derrick W., Peto, Tim E.A., Walker, A. Sarah, Wilcox, Mark H. and Dingle, Kate E. (2019) Clostridium difficile trehalose metabolism variants are common and not associated with adverse patient outcomes when variably present in the same lineage. EBioMedicine, 43 . pp. 347-355. doi:10.1016/j.ebiom.2019.04.038

Fang, Yuting, Noel, Adam, Eckford, Andrew W., Yang, Nan and Guo, Jing (2021) Characterization of cooperators in Quorum sensing with 2D molecular signal analysis. IEEE Transactions on Communications, 69 (2). pp. 799-816. doi:10.1109/TCOMM.2020.3036674

Farrant, Gregory K., Doré, Hugo, Cornejo-Castillo, Francisco M., Partensky, Frédéric, Ratin, Morgane, Ostrowski, Martin, Pitt, Frances D., Wincker, Patrick, Scanlan, David J. , Iudicone, Daniele, Acinas, Silvia G. and Garczarek, Laurence (2016) Delineating ecologically significant taxonomic units from global patterns of marine picocyanobacteria. Proceedings of the National Academy of Sciences of the United States of America, 113 (24). E3365-E3374. doi:10.1073/pnas.1524865113

Farrell, Frederick, Gralka, Matti, Hallatschek, Oskar and Waclaw, Bartlomiej (2017) Mechanical interactions in bacterial colonies and the surfing probability of beneficial mutations. Journal of the Royal Society, Interface, 14 (131). 20170073. doi:10.1098/rsif.2017.0073

Fayter, Alice E. R., Hasan, Muhammad, Congdon, Thomas R., Kontopoulou, Ioanna and Gibson, Matthew I. (2020) Ice recrystallisation inhibiting polymers prevent irreversible protein aggregation during solvent-free cryopreservation as additives and as covalent polymer-protein conjugates. European Polymer Journal, 140 . 110036. doi:10.1016/j.eurpolymj.2020.110036

Fenn, Jonathan S., Nepravishta, Ridvan, Guy, Collette S., Harrison, James, Angulo, Jesus, Cameron, Alexander and Fullam, Elizabeth (2019) Structural basis of glycerophosphodiester recognition by the mycobacterium tuberculosis substrate-binding protein UgpB. ACS Chemical Biology, 14 (9). pp. 1879-1887. doi:10.1021/acschembio.9b00204

Firczuk, Helena, Teahan, James, Mendes, Pedro and McCarthy, John E. G. (2020) Multi-site rate control analysis identifies ribosomal scanning as the sole high-capacity/low-flux-control step in mRNA translation. FEBS Journal, 287 (5). pp. 925-940. doi:10.1111/febs.15059

Fountain-Jones, Nicholas M., Kraberger, Simona, Gagne, Roderick B., Gilbertson, Marie L. J., Trumbo, Daryl R., Charleston, Michael, Salerno, Patricia E., Chris Funk, W., Crooks, Kevin, Logan, Kenneth, Alldredge, Mathew, Dellicour, Simon, Baele, Guy, Didelot, Xavier, VandeWoude, Sue, Carver, Scott and Craft, Meggan E. (2022) Hunting alters viral transmission and evolution in a large carnivore. Nature Ecology & Evolution . pp. 174-182. doi:10.1038/s41559-021-01635-5

Frankel, Gad, Shaw, Robert K., Pink, David, Berger, Cedric N. and Hand, Paul (2009) Fresh produce as a potential vector for bacterial human pathogens. Microbial Biotechnology, Vol.2 (No.6). pp. 595-597. doi:10.1111/j.1751-7915.2009.00137.x

Fraser, Hannah, Gallacher, Daniel C., Achana, Felix A., Court, Rachel A., Taylor-Phillips, Sian, Nduka, Chidozie U., Stinton, Chris, Willans, Rebecca, Gill, Paramjit and Mistry, Hema (2020) Rapid antigen detection and molecular tests for group A streptococcal infections for acute sore throat : systematic reviews and economic evaluation. Health Technology Assessment, 24 (31). pp. 1-232. doi:10.3310/hta24310

Freeman, Zoë N., Dorus, Steve and Waterfield, Nicholas R. (2013) The KdpD/KdpE two-component system : integrating K+ homeostasis and virulence. PLoS Pathogens, Volume 9 (Number 3). Article number e1003201. doi:10.1371/journal.ppat.1003201

(2020) A publicly accessible database for Clostridioides difficile genome sequences supports tracing of transmission chains and epidemics. Microbial Genomics, 6 (8). doi:10.1099/mgen.0.000410

Fullam, Elizabeth, Pojer, Florence, Bergfors, Terese, Jones, T. Alwyn and Cole, Stewart T. (2012) Structure and function of the transketolase from Mycobacterium tuberculosis and comparison with the human enzyme. Open Biology, Volume 2 (110026). Article number 110026. doi:10.1098/rsob.110026

Fullam, Elizabeth, Prokes, Ivan, Fütterer, Klaus and Besra, Gurdyal S. (2016) Structural and functional analysis of the solute-binding protein UspC from Mycobacterium tuberculosis that is specific for amino sugars. Open Biology (6). doi:10.1098/rsob.160105

Furner-Pardoe, Jessica, Anonye, Blessing O., Cain, Ricky, Moat, John, Ortori, Catherine A., Lee, Christina, Barrett, David A., Corre, Christophe and Harrison, Freya (2020) Anti-biofilm efficacy of a medieval treatment for bacterial infection requires the combination of multiple ingredients. Scientific Reports, 10 (1). 12687. doi:10.1038/s41598-020-69273-8

Furze, Christopher M., Delso, Ignacio, Casal, Enriqueta, Guy, Collette S., Seddon, Chloe, Brown, Chelsea M., Parker, Hadyn L., Radhakrishnan, Anjana, Pacheco-Gomez, Raul, Stansfeld, Phillip J., Angulo, Jesus, Cameron, Alexander D. and Fullam, Elizabeth (2021) Structural basis of trehalose recognition by the mycobacterial LpqY-SugABC transporter. Journal of Biological Chemistry, 296 . 100307. doi:10.1016/j.jbc.2021.100307

Galley, Nicola F., O'Reilly, Amy M. and Roper, David I. (2014) Prospects for novel inhibitors of peptidoglycan transglycosylase. Bioorganic Chemistry, Volume 55 (Number 100). pp. 16-26. doi:10.1016/j.bioorg.2014.05.007

Garcia De Gonzalo, C. V., Denham, Emma, Mars, Ruben A. T., Stülke, J., Donk, W. A. van der and Dijl, Jan Maarten van (2015) The phosphoenolpyruvate : sugar phosphotransferase system is involved in sensitivity to the glucosylated bacteriocin sublancin. Antimicrobial agents and chemotherapy, 59 (11). pp. 6844-6854. doi:10.1128/AAC.01519-15

(2021) Cyanorak v2.1 : a scalable information system dedicated to the visualization and expert curation of marine and brackish picocyanobacteria genomes. Nucleic Acids Research, 49 (D1). D667-D676. doi:10.1093/nar/gkaa958

García-Rodríguez, Luis J., De Piccoli, Giacomo, Marchesi, Vanessa, Jones, Richard C., Edmondson, Ricky D. and Labib, Karim (2015) A conserved Polϵ binding module in Ctf18-RFC is required for S-phase checkpoint activation downstream of Mec1. Nucleic Acids Research, 43 (18). pp. 8830-8838. doi:10.1093/nar/gkv799

Gaze, William H., O'Neill, Colette, Wellington, E. M. H. and Hawkey, P. M. (2008) Antibiotic resistance in the environment, with particular reference to MRSA. Advances in Applied Microbiology, Vol.63 . pp. 249-280. doi:10.1016/S0065-2164(07)00007-X

Ghebrehewet, Sam, Shepherd, Wendi, Panford-Quainoo, Edwin, Shantikumar, Saran, Decraene, Valerie, Rajendran, Rajesh, Kaushal, Menaal, Akuffo, Afua, Ayerh, Dinah and Amofah, George (2020) Implementation of a delayed prescribing model to reduce antibiotic prescribing for suspected upper respiratory tract infections in a hospital outpatient department, Ghana. Antibiotics, 9 (11). 773. doi:10.3390/antibiotics9110773

Giacomucci, Sean, Alvarez, Laura, Rodrigues, Christopher D. A., Cava, Felipe and Paradis-Bleau, Catherine (2022) Hydroxyl radical overproduction in the envelope : an achilles' heel in peptidoglycan synthesis. Microbiology Spectrum, 10 (1). e0120321. doi:10.1128/spectrum.01203-21

(2014) Nitric oxide sensing in plants is mediated by proteolytic control of group VII ERF transcription factors. Molecular Cell, Volume 53 (Number 3). pp. 369-379. doi:10.1016/j.molcel.2013.12.020

Gilbert, Rosalind A., Townsend, Eleanor M., Crew, Kathleen S., Hitch, Thomas C. A., Friedersdorff, Jessica C. A., Creevey, Christopher J., Pope, Phillip B., Ouwerkerk, Diane and Jameson, Eleanor (2020) Rumen virus populations : technological advances enhancing current understanding. Frontiers in Microbiology, 11 . 451. doi:10.3389/fmicb.2020.00450

Girija, Umakhanth Venkatraman, Furze, Christopher M., Gingras, Alexandre R., Yoshizaki, Takayuki, Ohtani, Katsuki, Marshall, Jamie E., Wallis, A. Katrine, Schwaeble, Wilhelm J., El-Mezgueldi, Mohammed, Mitchell, Daniel A., Moody, Peter C. E., Wakamiya, Nobutaka and Wallis, Russell (2015) Molecular basis of sugar recognition by collectin-K1 and the effects of mutations associated with 3MC syndrome. BMC biology, 13 (1). pp. 1-13. 27. doi:10.1186/s12915-015-0136-2

Gleeson, Deirdre B., Martin, Belinda C., Lardner, Tim, Ball, Andrew S., Grice, Kliti, Holman, Alex I., Trolove, Alastair, Manix, Megan, Tibbett, Mark, Bending, G. D., Hilton, Sally and Ryan, Megan H. (2021) Natural attenuation of legacy hydrocarbon spills in pristine soils is feasible despite difficult environmental conditions in the monsoon tropics. Science of The Total Environment, 799 . 149335. doi:10.1016/j.scitotenv.2021.149335

Goffe, Louis, Antonopoulou, Vivi, Meyer, Carly, Graham , Fiona, Tang, Mei Yee, Lecouturier, Jan, Grimani, Aikaterini, Bambra, Clare, Kellen, Michael and Sniehotta , Falko (2022) Factors associated with vaccine intention in adults living in England who either did not want or had not yet decided to be vaccinated against COVID-19. Human Vaccines & Immunotherapeutics, 17 (12). 5242-5254 . doi:10.1080/21645515.2021.2002084

Gog, Julia R., Hill, Edward M., Danon, Leon and Thompson, Robin N. (2021) Vaccine escape in a heterogeneous population : insights for SARS-CoV-2 from a simple model. Royal Society Open Science, 8 (7). 210530. doi:10.1098/rsos.210530

Gog, Julia R., Pellis, Lorenzo, Wood, James L. N., McLean, Angela R., Arinaminpathy, Nimalan and Lloyd-Smith, James O. (2015) Seven challenges in modelling pathogen dynamics within-host and across scales. Epidemics, Volume 10 . pp. 45-48. doi:10.1016/j.epidem.2014.09.009

Gorsich, Erin E., Beechler, Brianna R., van Bodegom, Peter M., Govender, Danny, Guarido, Milehna, Venter, Marietjie and Schrama, Maarten (2019) A comparative assessment of adult mosquito trapping methods to estimate spatial patterns of abundance and community composition in southern Africa. Parasites & Vectors, 12 . 462 . doi:10.1186/s13071-019-3733-z

(2014) Crossing the interspecies barrier : opening the door to zoonotic pathogens. PLoS Pathogens, Volume 10 (Number 6). Article number e1004129. doi:10.1371/journal.ppat.1004129

Grafke, Tobias, Cates, Michael E. and Vanden-Eijnden, Eric (2017) Spatiotemporal self-organization of fluctuating bacterial colonies. Physical Review Letters, 119 (18). 188003 . doi:10.1103/PhysRevLett.119.188003

Graham, Neil S., Broadley, Martin R., Hammond, John P., White, Philip J. and May, Sean T. (2007) Optimising the analysis of transcript data using high density oligonucleotide arrays and genomic DNA-based probe selection. BMC Genomics, Vol.8 (No.344). doi:10.1186/1471-2164-8-344

Granato, Elisa T., Harrison, Freya, Kümmerli, Rolf and Ross-Gillespie, Adin (2016) Do bacterial “virulence factors” always increase virulence? A meta-analysis of pyoverdine production in pseudomonas aeruginosa as a test case. Frontiers in Microbiology, 7 . doi:10.3389/fmicb.2016.01952

Greene, Nicholas P., Kaplan, Elise, Crow, Allister and Koronakis, Vassilis (2018) Antibiotic resistance mediated by the MacB ABC transporter family : a structural and functional perspective. Frontiers in Microbiology, 9 . 950. doi:10.3389/fmicb.2018.00950

Gregor, Ivan, Dröge, Johannes, Schirmer, Melanie, Quince, Christopher and McHardy, Alice C. (2016) PhyloPythiaS+ : a self-training method for the rapid reconstruction of low-ranking taxonomic bins from metagenomes. PeerJ, 4 . e1603. doi:10.7717/peerj.1603

Grigonyte, Aurelija, Harrison, Christian, Macdonald, Paul R., Montero-Blay, Ariadna, Tridgett, Matthew, Duncan, John, Sagona, Antonia P., Constantinidou, Chrystala, Jaramillo, Alfonso and Millard, Andrew D. (2020) Comparison of CRISPR and marker-based methods for the engineering of Phage T7. Viruses, 12 (2). e193. doi:10.3390/v12020193

Grob, Carolina, Jardillier, Ludwig, Hartmann, Manuela, Ostrowski, Martin, Zubkov, Mikhail V. and Scanlan, David J. (2015) Cell-specific CO2 fixation rates of two distinct groups of plastidic protists in the Atlantic Ocean remain unchanged after nutrient addition. Environmental Microbiology Reports, Volume 7 (Number 2). pp. 211-218. doi:10.1111/1758-2229.12228

Grob, Carolina, Taubert, Martin, Howat, Alexandra M., Burns, Oliver J., Dixon, Joanna L., Richnow, Hans H., Jehmlich, Nico, von Bergen, Martin, Chen, Yin and Murrell, J. C. (J. Colin) (2015) Combining metagenomics with metaproteomics and stable isotope probing reveals metabolic pathways used by a naturally occurring marine methylotroph. Environmental Microbiology, 17 (10). pp. 4007-4018. doi:10.1111/1462-2920.12935

Grobas, Iago, Asally, Munehiro and Polin, Marco (2022) The dynamics of single-to-multi layer transition in bacterial swarms. Frontiers in Soft Matter, 2 . 936779. doi:10.3389/frsfm.2022.936779

Grobas, Iago, Bazzoli, Dario G. and Asally, Munehiro (2020) Biofilm and swarming emergent behaviours controlled through the aid of biophysical understanding and tools. Biochemical Society Transactions, 48 (6). pp. 2903-2913. doi:10.1042/BST20200972

Grobas, Iago, Polin, Marco and Asally, Munehiro (2021) Swarming bacteria undergo localized dynamic phase transition to form stress-induced biofilms. eLife, 10 . e62632. doi:10.7554/eLife.62632

Grosskinsky, Stefan, Marahrens, Daniel and Stevens, Angela (2017) A hydrodynamic limit for chemotaxis in a given heterogeneous environment. Vietnam Journal of Mathematics, 45 (1-2). pp. 127-152. doi:10.1007/s10013-016-0209-8

Großkopf, Tobias, Consuegra, Jessika, Gaffé, Joël, Willison, John C., Lenski, Richard E., Soyer, Orkun S. and Schneider, Dominique (2016) Metabolic modelling in a dynamic evolutionary framework predicts adaptive diversification of bacteria in a long-term evolution experiment. BMC Evolutionary Biology, 16 (1). doi:10.1186/s12862-016-0733-x

Großkopf, Tobias and Soyer, Orkun S. (2016) Microbial diversity arising from thermodynamic constraints. The ISME Journal, 10 . pp. 2725-2733. doi:10.1038/ismej.2016.49

Großkopf, Tobias and Soyer, Orkun S. (2014) Synthetic microbial communities. Current Opinion in Microbiology, Volume 18 . pp. 72-77. doi:10.1016/j.mib.2014.02.002

Großkopf, Tobias, Zenobi, Simone, Alston, Mark, Folkes, Leighton, Swarbreck, David and Soyer, Orkun S. (2016) A stable genetic polymorphism underpinning microbial syntrophy. The ISME Journal, 10 . pp. 2844-2853. doi:10.1038/ismej.2016.80

Grébert, Théophile, Doré, Hugo, Partensky, Frédéric, Farrant, Gregory K., Boss, Emmanuel S., Picheral, Marc, Guidi, Lionel, Pesant, Stéphane, Scanlan, David J. , Wincker, Patrick, Acinas, Silvia G., Kehoe, David M. and Garczarek, Laurence (2018) Light color acclimation is a key process in the global ocean distribution of Synechococcus cyanobacteria. Proceedings of the National Academy of Sciences of the United States of America, 115 (9). E2010-E2019. 201717069. doi:10.1073/pnas.1717069115

Gu, Yinghong, Li, Huanyu, Dong, Haohao, Zeng, Yi, Zhang, Zhengyu, Paterson, Neil G., Stansfeld, Phillip J., Wang, Zhongshan, Zhang, Yizheng, Wang, Wenjian and Dong, Changjiang (2016) Structural basis of outer membrane protein insertion by the BAM complex. Nature, 531 (7592). pp. 64-69. doi:10.1038/nature17199

Guarido, M. M., Riddin, M. A., Johnson, T., Braack, L. E. O., Schrama, M., Gorsich, Erin E., Brooke, B. D., Almeida, A. P. G. and Venter, Marietjie (2021) Aedes species (Diptera: Culicidae) ecological and host feeding patterns in the north-eastern parts of South Africa, 2014–2018. Parasites & Vectors, 14 (1). 339. doi:10.1186/s13071-021-04845-9

Guarido, Milehna Mara, Motlou, Thopisang, Riddin, Megan A., MacIntyre, Caitlin, Manyana, Sontaga Cris, Johnson, Todd, Schrama, Maarten, Gorsich, Erin E., Brooke, Basil D., Almeida, A. Paulo G. and Venter, Marietjie (2021) Potential mosquito vectors for Shuni virus, South Africa, 2014–2018. Emerging Infectious Diseases , 27 (12). pp. 3142-3146. doi:10.3201/eid2712.203426

Guetzoyan, Lucie J., Spooner, Robert A. , Lord, Mike, Roberts, L. M. (Lynne M.) and Clarkson, Guy J. (2010) Simple oxidation of pyrimidinylhydrazones to triazolopyrimidines and their inhibition of Shiga toxin trafficking. European Journal of Medicinal Chemistry, Vol.45 (No.1). pp. 275-283. doi:10.1016/j.ejmech.2009.10.007

Guillonneau, Richard, Murphy, Andrew, Teng, Zhao-Jie, Wang, Peng , Zhang, Yu-Zhong, Scanlan, David J. and Chen, Yin (2022) Trade-offs of lipid remodelling in a marine predator-prey interaction in response to phosphorus limitation. Proceedings of the National Academy of Sciences of the United States of America, 119 (36). e2203057119. doi:10.1073/pnas.2203057119

Gull, Sadaf and Minhas, Fayyaz ul Amir Afsar (2022) AMP0 : species-specific prediction of anti-microbial peptides using zero and few shot learning. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 19 (1). pp. 275-283. doi:10.1109/TCBB.2020.2999399

Gull, Sadaf, Shamim, Nauman and Minhas, Fayyaz ul Amir Afsar (2019) AMAP : Hierarchical multi-label prediction of biologically active and antimicrobial peptides. Computers in Biology and Medicine, 107 . pp. 172-181. doi:10.1016/j.compbiomed.2019.02.018

Gutierrez-Caballero, Cristina, Burgess, Selena G., Bayliss, Richard and Royle, Stephen J. (2015) TACC3-ch-TOG track the growing tips of microtubules independently of clathrin and Aurora-A phosphorylation. Biology Open, 4 . pp. 170-179. doi:10.1242/bio.201410843

Guy, Collette S., Gibson, Matthew I. and Fullam, Elizabeth (2019) Targeting extracellular glycans : tuning multimeric boronic acids for pathogen-selective killing of Mycobacterium tuberculosis. Chemical Science, 10 (23). 5935-5942 . doi:10.1039/C9SC00415G

Guy, Collette S., Murray, Kathryn, Gibson, Matthew I. and Fullam, Elizabeth (2019) Dimeric benzoboroxoles for targeted activity against Mycobacterium tuberculosis. Organic & Biomolecular Chemistry, 17 (43). pp. 9524-9528. doi:10.1039/C9OB02222H

Guy, Collette S., Tomás, Ruben M. F., Tang, Qiao, Gibson, Matthew I. and Fullam, Elizabeth (2022) Imaging of antitubercular dimeric boronic acids at the mycobacterial cell surface by click-probe capture. Chemical Communications, 58 (67). pp. 9361-9364. doi:10.1039/D2CC02407A

Gyoergy, Attila, Roblek, Marko, Ratheesh, Aparna, Valoskova, Katarina, Belyaeva, Vera, Wachner, Stephanie, Matsubayashi, Yutaka, Sánchez-Sánchez, Besaiz J., Stramer, Brian and Siekhaus, Daria E. (2018) Tools allowing independent visualization and genetic manipulation of Drosophila melanogaster macrophages and surrounding tissues. G3: Genes, Genomes, Genetics, 8 (3). g3.300452.2017. doi:10.1534/g3.117.300452

Gómez-Pereira, Paola R., Hartmann, Manuela, Grob, Carolina, Tarran, Glen A., Martin, Adrian P., Fuchs, Bernhard M., Scanlan, David J. and Zubkov, Mikhail V. (2013) Comparable light stimulation of organic nutrient uptake by SAR11 and Prochlorococcus in the North Atlantic subtropical gyre. The ISME Journal, Vol.7 (No.3). pp. 603-614. doi:10.1038/ismej.2012.126

Gómez-Álvarez, Helena, Iturbe, Pablo, Rivero-Buceta, Virginia, Mines, Paul, Bugg, Tim, Nogales, Juan and Díaz, Eduardo (2022) Bioconversion of lignin-derived aromatics into the building block pyridine 2,4-dicarboxylic acid by engineering recombinant Pseudomonas putida strains. Bioresource Technology, 346 . 126638. doi:10.1016/j.biortech.2021.126638

Hackenberg, Dieter, Asare-Bediako, Elvis, Baker, Adam R., Walley, Peter Glen, Jenner, Carol E., Greer, Shannon, Bramham, Lawrence, Batley, Jacqueline, Edwards, David, Delourme, Regine, Barker, Guy C., Teakle, Graham R. and Walsh, John A. (2020) Identification and QTL mapping of resistance to Turnip yellows virus (TuYV) in oilseed rape, Brassica napus. Theoretical and Applied Genetics, 133 (2). pp. 383-393. doi:10.1007/s00122-019-03469-z

Hadlington, Jane L., Santoro, Aniello, Nuttall, James, Denecke, J. (Jurgen), Ma, Julian K.-C., Vitale, A. (Alessandro) and Frigerio, Lorenzo (2003) The c-terminal extension of a hybrid immunoglobulin A/G heavy chain is responsible for its Golgi-mediated sorting to the vacuole. Molecular Biology of the Cell, Vol.14 (No.6). pp. 2592-2602. doi:10.1091/mbc.E02-11-0771

(2018) Antibiotics and activity spaces: protocol of an exploratory study of behaviour, marginalisation and knowledge diffusion. BMJ Global Health, 3 . e000621. doi:10.1136/bmjgh-2017-000621

Haenssgen, Marco Johannes, Xayavong, Thipphaphone, Charoenboon, Nutcha, Warapikuptanun, Penporn and Khine Zaw, Yuzana (2018) The consequences of AMR education and awareness raising : outputs, outcomes, and behavioural impacts of an antibiotic-related educational activity in Lao PDR. Antibiotics, 7 (4). 95. doi:10.3390/antibiotics7040095

Haering, Christian H., Farcas, Ana-Maria, Arumugam, Prakash, Metson, Jean and Nasmyth, Kim (2008) The cohesin ring concatenates sister DNA molecules. Nature, Vol.454 . pp. 297-301. doi:10.1038/nature07098

Haidari, G., Cope, A., Miller, A., Venables, S., Yan, C., Ridgers, H., Reijonen, K., Hannaman, D., Spentzou, A., Hayes, P., Bouliotis, Georgios, Vogt, A., Joseph, S., Combadiere, B., McCormack, S. and Shattock, R. J. (2017) Combined skin and muscle vaccination differentially impact the quality of effector T cell functions : the CUTHIVAC-001 randomized trial. Scientific Reports, 7 (1). 13011. doi:10.1038/s41598-017-13331-1

Halachev, Mihail R., Chan, Jacqueline, Constantinidou, Chrystala, Cumley, Nicola, Bradley, Craig, Smith-Banks, Matthew, Oppenheim, Beryl and Pallen, Mark J. (2014) Genomic epidemiology of a protracted hospital outbreak caused by multidrug-resistant Acinetobacter baumannii in Birmingham, England. Genome Medicine, Volume 6 (Number 11). pp. 1-13. Article number 70. doi:10.1186/s13073-014-0070-x

Halachev, Mihail R., Loman, Nicholas J. and Pallen, Mark J. (2011) Calculating orthologs in bacteria and archaea : a divide and conquer approach. PLoS One, Volume 6 (Number 12). Article number e28388. doi:10.1371/journal.pone.0028388

Hall, Sharon A., Allen, Rebecca L., Baumber, Rachel E., Baxter, Laura, Fisher, Kate, Bittner-Eddy , Peter D., Rose, Laura E., Holub, E. B. and Beynon, Jim (2009) Maintenance of genetic variation in plants and pathogens involves complex networks of gene-for-gene interactions. Molecular Plant Pathology, Vol.10 (No.4). pp. 449-457. doi:10.1111/j.1364-3703.2009.00544.x

Hammond, J., Adams, I., Fowkes, A., McGreig, S., Botermans, M., van Oorspronk, J., Westenberg, M., Verbeek, M., Dullemans, A., Stijger, C., Blouin, A., Massart, S., de Jonghe, K., Heyneman, M., Walsh, John A. and Fox, A. (2021) Sequence analysis of 43-year old samples of Plantago lanceolata show that Plantain virus X is synonymous with Actinidia virus X and is widely distributed. Plant Pathology, 70 (2). pp. 249-258. doi:10.1111/ppa.13310

Hammond, John P., Broadley, Martin R., Craigon, David J., Higgins, Janet, Emmerson, Zoe F., Townsend, Henrik J., White, Philip J. and May, Sean T. (2005) Using genomic DNA-based probe-selection to improve the sensitivity of high-density oligonucleotide arrays when applied to heterologous species. Plant Methods, Vol.1 (No.10). doi:10.1186/1746-4811-1-10

Hancock, Penelope A. and Godfray, H. Charles J. (2012) Modelling the spread of Wolbachia in spatially heterogeneous environments. Journal of The Royal Society Interface, Vol.9 (No.76). pp. 3045-3054. doi:10.1098/rsif.2012.0253

Hardy, K. (Katherine), Price, Charlotte L, Szczepura, Ala, Gossain, Savita, Davies, Ruth, Stallard, Nigel, Shabir, Sahida, McMurray, Claire, Bradbury, Andrew and Hawkey, P. M. (Peter M.) (2009) Reduction in the rate of methicillin-resistant Staphylococcus aureus acquisition in surgical wards by rapid screening for colonization : a prospective, cross-over study. Clinical Microbiology and Infection, Vol.16 (No.4). pp. 333-339. doi:10.1111/j.1469-0691.2009.02899.x

Hargreaves, Katherine R., Otieno, James R., Thanki, Anisha, Blades, Matthew J., Millard, Andrew D., Browne, Hilary P., Lawley, Trevor D. and Clokie, Martha R. J. (2015) As clear as mud? Determining the diversity and prevalence of prophages in the draft genomes of estuarine isolates of Clostridium difficile. Genome Biology and Evolution, Volume 7 (Number 7). pp. 1842-1855. doi:10.1093/gbe/evv094

Harrington, Niamh, Littler, Jenny and Harrison, Freya (2022) Transcriptome analysis of Pseudomonas aeruginosa biofilm infection in an ex vivo pig model of the cystic fibrosis lung. Applied and Environmental Microbiology, 88 (3). e01789-21. doi:10.1128/AEM.01789-21

Harrington, Niamh, Sweeney, Esther and Harrison, Freya (2020) Building a better biofilm - formation of in vivo-like biofilm structures by Pseudomonas aeruginosa in a porcine model of cystic fibrosis lung infection. Biofilm, 2 . 100024. doi:10.1016/j.bioflm.2020.100024

Harrison, Andrew B., Binder, Hans, Buhot, Arnaud , Burden, Conrad John, Carlon, Enrico, Gibas, Cynthia, Gamble, Lara J., Halperin, Avraham, Hooyberghs, Jef, Kreil, David, Levicky, Rastislav, Noble, Peter A., Ott, Albrecht, Pettitt, B. Montgomery, Tautz, Diethard and Pozhitkov, Alexander E. (2013) Physico-chemical foundations underpinning microarray and next-generation sequencing experiments. Nucleic Acids Research, Volume 41 (Number 5). pp. 2779-2796. doi:10.1093/nar/gks1358

Harrison, Freya and Buckling, Angus (2011) Wider access to genotypic space facilitates loss of cooperation in a bacterial mutator. PLoS One, 6 (2). e17254. doi:10.1371/journal.pone.0017254

Harrison, Freya and Diggle, Stephen P. (2016) An ex vivo lung model to study bronchioles infected with Pseudomonas aeruginosa biofilms. Microbiology, 162 . pp. 1755-1760. doi:10.1099/mic.0.000352

Harrison, Freya, McNally, Alan, da Silva, Ana C., Heeb, Stephan and Diggle, Stephen P. (2017) Optimised chronic infection models demonstrate that siderophore ‘cheating’ in Pseudomonas aeruginosa is context specific. The ISME Journal, 11 . pp. 2492-2509. doi:10.1038/ismej.2017.103

Harrison, Freya, Muruli, Aneesha, Higgins, Steven and Diggle, Stephen P. (2014) Development of an ex vivo porcine lung model for studying growth, virulence, and signaling of pseudomonas aeruginosa. Infection and Immunity, 82 (8). pp. 3312-3323. doi:10.1128/IAI.01554-14

Hartlieb, Matthias, Williams, E. G., Kuroki, Agnès, Perrier, Sébastien and Locock, K. E. (2017) Antimicrobial polymers : mimicking amino acid functionality, sequence control and three-dimensional structure of host-defense peptides. Current Medicinal Chemistry, 24 (19). pp. 2115-2140. doi:10.2174/0929867324666170116122322

Hartmann, Manuela, Grob, Carolina, Tarran, Glen A., Martin, Adrian P., Burkill, Peter H., Scanlan, David J. and Zubkov, Mikhail V. (2012) Mixotrophic basis of Atlantic oligotrophic ecosystems. Proceedings of the National Academy of Sciences, Volume 109 (Number 15). pp. 5756-5760. doi:10.1073/pnas.1118179109

Hasan, Muhammad, Fayter, Alice E. R. and Gibson, Matthew I. (2018) Ice recrystallization inhibiting polymers enable glycerol-free cryopreservation of microorganisms. Biomacromolecules, 19 (8). pp. 3371-3376. doi:10.1021/acs.biomac.8b00660

Hassan, Marwa, Harrington, Niamh, Sweeney, Esther and Harrison, Freya (2020) Predicting antibiotic-associated virulence of pseudomonas aeruginosa using an ex vivo lung biofilm model. Frontiers in Microbiology, 11 . 568510. doi:10.3389/fmicb.2020.568510

Hatton, Caitlin, Brotherton, Deborah H., Spencer, Mahalah and Cameron, Alexander D. (2022) Structure of cytosine transport protein CodB provides insight into nucleobase‐cation symporter 1 mechanism. The EMBO Journal, 41 (16). e110527. doi:10.15252/embj.2021110527

Heal, Jack W., Wells, Stephen A., Blindauer, Claudia A., Freedman, R. B. and Römer, Rudolf A. (2015) Characterization of folding cores in the cyclophilin A-cyclosporin A complex. Biophysical Journal, Volume 108 (Number 7). pp. 1739-1746. doi:10.1016/j.bpj.2015.02.017

Heather, Zoe, Holden, Matthew T. G., Steward, Karen F., Parkhill, Julian, Song, Lijiang, Challis, Gregory L., Robinson, C. (Carl), Davis-Poynter, Nicholas and Waller, Andrew S. (2008) A novel streptococcal integrative conjugative element involved in iron acquisition. Molecular Microbiology, Volume 70 (Number 5). pp. 1274-1292. doi:10.1111/j.1365-2958.2008.06481.x

Heidecker, Bettina, Dagan, Noa, Balicer, Ran, Eriksson, Urs, Rosano, Giuseppe, Coats, Andrew, Tschöpe, Carsten, Kelle, Sebastian, Poland, Gregory A., Frustaci, Andrea, Klingel, Karin, Martin, Pilar, Hare, Joshua M., Cooper, Leslie T., Pantazis, Antonis, Imazio, Massimo, Prasad, Sanjay and Lüscher, Thomas F. (2022) Myocarditis following COVID ‐19 vaccine : incidence, presentation, diagnosis, pathophysiology, therapy, and outcomes put into perspective. A clinical consensus document supported by the Heart Failure Association of the European Society of Cardiology (ESC) and the ESC Working Group on Myocardial and Pericardial Diseases. European Journal of Heart Failure . doi:10.1002/ejhf.2669 (In Press)

Helliwell, Katherine Emma, Lawrence, Andrew David, Holzer, Andre, Kudahl, Johan, Sasso, Severin, Kräutler, Bernhard , Scanlan, David J. , Warren , Martin James and Smith, Alison Gail (2016) Cyanobacteria and eukaryotic algae use different chemical variants of vitamin B12. Current Biology, 26 (8). pp. 999-1008. doi:10.1016/j.cub.2016.02.041

Hellyer, Thomas P., Anderson, Niall H., Parker, Jennie, Dark, Paul, Van Den Broeck, Tina, Singh, Suveer, McMullan, Ronan, Agus, Ashley M., Emerson, Lydia M., Blackwood, Bronagh, Gossain, Savita, Walsh, Tim S., Perkins, Gavin D., Conway Morris, Andrew, McAuley, Daniel F. and Simpson, A. John (2016) Effectiveness of biomarker-based exclusion of ventilator-acquired pneumonia to reduce antibiotic use (VAPrapid-2) : study protocol for a randomised controlled trial. Trials, 17 (1). doi:10.1186/s13063-016-1442-x

Hellyer, Thomas P., Anderson, Niall H., Parker, Jennie, Dark, Paul, Van Den Broeck, Tina, Singh, Suveer, McMullan, Ronan, Agus, Ashley M., Emerson, Lydia M., Blackwood, Bronagh, Gossain, Savita, Walsh, Tim S., Perkins, Gavin D., Morris, Andrew Conway, McAuley, Daniel F. and Simpson, A. John (2016) Erratum to : ‘Effectiveness of biomarker-based exclusion of ventilator-acquired pneumonia to reduce antibiotic use (VAPrapid-2) : study protocol for a randomised controlled trial’. Trials, 17 (1). doi:10.1186/s13063-016-1594-8

Hemsley, Claudia M., Luo, Jamie X., Andreae, Clio A., Butler, Clive S., Soyer, Orkun S. and Titball, Richard W. (2014) Bacterial drug tolerance under clinical conditions is governed by anaerobic adaptation but not anaerobic respiration. Antimicrobial Agents and Chemotherapy, Volume 58 (Number 10). pp. 5775-5783. doi:10.1128/AAC.02793-14

Heneghan, Mary N., Porta, Claudine, Zhang, Cunjin, Burton, Kerry S., Challen, Michael P., Bailey, Andy M. and Foster, Gary D. (2009) Characterization of serine proteinase expression in agaricus bisporus and coprinopsis cinerea by using green fluorescent protein and the A. bisporus SPR1 Promoter. Applied and Environmental Microbiology, Vol.75 (No.3). pp. 792-801. doi:10.1128/AEM.01897-08

Hennart, Melanie, Panunzi, Leonardo G., Rodrigues, Carla, Gaday, Quentin, Baines, Sarah L., Barros-Pinkelnig, Marina, Carmi-Leroy, Annick, Dazas, Melody, Wehenkel, Anne Marie, Didelot, Xavier, Toubiana, Julie, Badell, Edgar and Brisse, Sylvain (2020) Population genomics and antimicrobial resistance in Corynebacterium diphtheriae. Genome Medicine, 12 (1). 107. doi:10.1186/s13073-020-00805-7

Herdman, M., von Kügelgen, A., Kureisaite-Ciziene, D., Duman, R., El Omari, K., Garman, E. F., Kjaer, A., Kolokouris, D., Löwe, J., Wagner, A., Stansfeld, Phillip J. and Bharat, T. (2022) High-resolution mapping of metal ions reveals principles of surface layer assembly in Caulobacter crescentus cells. Structure, 30 (2). pp. 215-228. doi:10.1016/j.str.2021.10.012

Hill, Steven M. (Mark), Neve, Richard M., Bayani, Nora, Kuo, Wen-Lin, Ziyad, Safiyyah, Spellman, Paul T., Gray, Joe W. and Mukherjee, Sach (2012) Integrating biological knowledge into variable selection : an empirical Bayes approach with an application in cancer biology. BMC Bioinformatics, Volume 13 (Number 1). Article no. 94. doi:10.1186/1471-2105-13-94

Hillman, Evette B. M, Rijpkema, Sjoerd, Carson, Danielle, Arasaradnam, Ramesh P., Wellington, Elizabeth M. H. and Amos, Gregory C. A. (2021) Manipulating the microbiome : an alternative treatment for bile acid diarrhoea. Microbiology Research, 12 (2). pp. 335-353. doi:10.3390/microbiolres12020023

Hilton, Sally, Bennett, Amanda J., Keane, Gary, Bending, G. D., Chandler, David, Stobart, Ron and Mills, P. R. (2013) Impact of shortened crop rotation of oilseed rape on soil and rhizosphere microbial diversity in relation to yield decline. PLoS One, Volume 8 (Number 4). e59859. doi:10.1371/journal.pone.0059859

Hilton, Sally, Picot, Emma, Schreiter, Susanne, Bass, David, Norman, Keith, Oliver, Anna E., Moore, Jonathan D., Mauchline, Tim H., Mills, Peter R., Teakle, Graham R., Clark, Ian. M., Hirsch, Penny. R., van der Gast, Christopher J. and Bending, G. D. (2021) Identification of microbial signatures linked to oilseed rape yield decline at the landscape scale. Microbiome, 9 . 19. doi:10.1186/s40168-020-00972-0

Hind, Charlotte K., Dowson, Christopher G., Sutton, J. Mark, Jackson, Thomas, Clifford, Melanie, Garner, R. Colin and Czaplewski, Lloyd (2019) Evaluation of a library of FDA-approved drugs for their ability to potentiate antibiotics against multidrug resistant Gram-negative pathogens. Antimicrobial Agents and Chemotherapy, 63 . e00769. doi:10.1128/AAC.00769-19

Ho, Po-Yi, Martins, Bruno M. C. and Amir, Ariel (2020) A mechanistic model of the regulation of division timing by the circadian clock in cyanobacteria. Biophysical Journal, 118 (12). pp. 2905-2913. doi:10.1016/j.bpj.2020.04.038

Hogg, Chloe, Panir, Kavita, Dhami, Priya, Rosser, Matthew, Mack, Matthias, Soong, Daniel, Pollard, Jeffrey W., Jenkins, Stephen J., Horne, Andrew W. and Greaves, Erin (2021) Macrophages inhibit and enhance endometriosis depending on their origin. Proceedings of the National Academy of Sciences of the United States of America, 118 (6). e2013776118. doi:10.1073/pnas.2013776118

(2009) Rapid evolution of virulence and drug resistance in the emerging zoonotic pathogen Streptococcus suis. PLOS One, Vol.4 (No.7). doi:10.1371/journal.pone.0006072

Holmes, Antony, Kalvala, Sara and Whitworth, David E. (2010) Spatial simulations of myxobacterial development. PLoS Computational Biology, Vol.6 (No.2). e1000686. doi:10.1371/journal.pcbi.1000686

Holmes, Ian, Harris, Keith and Quince, Christopher (2012) Dirichlet multinomial mixtures : generative models for microbial metagenomics. PLoS One, Volume 7 (Number 2). Article number e30126. doi:10.1371/journal.pone.0030126

Holt, Kathryn E., Aanensen, David M. and Achtman, Mark (2022) Genomic population structures of microbial pathogens. Philosophical Transactions of the Royal Society B: Biological Sciences, 377 (1861). 20210230. doi:10.1098/rstb.2021.0230

Hothersall, Joanne, Lai, Sandie, Zhang, Nana, Godfrey, Rita E., Ruanto, Patcharawarin, Bischoff, Sarah, Robinson, Colin, Overton, Tim W., Busby, Stephen J. W. and Browning, Douglas F. (2022) Inexpensive protein overexpression driven by the NarL transcription activator protein. Biotechnology and Bioengineering, 119 (6). pp. 1614-1623. doi:10.1002/bit.28071

House, Thomas A. (2014) Epidemiological dynamics of Ebola outbreaks. eLife, Volume 3 . doi:10.7554/eLife.03908

Howat, Alexandra M., Vollmers, John, Taubert, Martin, Grob, Carolina, Dixon, Joanna L., Todd, Jonathan, Chen, Yin, Kaster, Anne-Kristin and Murrell, J. C. (J. Colin) (2018) Comparative genomics and mutational analysis reveals a novel XoxF-utilising methylotroph in the Roseobacter group isolated from the marine environment. Frontiers in Microbiology, 9 . 766. doi:10.3389/fmicb.2018.00766

Hrast, Martina, Jukič, Marko, Patin, Delphine, Tod, Julie, Dowson, Christopher G., Roper, David I., Barreteau, Hélène and Gobec, Stanislav (2018) In silico identification, synthesis and biological evaluation of novel tetrazole inhibitors of MurB. Chemical Biology & Drug Design, 91 (6). pp. 1101-1112. doi:10.1111/cbdd.13172

Hu, Qingfeng, Yu, Yan, Gu, Dongshi, Xie, Li, Chen, Xingrou, Xu, Ning, Ruan, Jennifer Jin, Dowson, Christopher G. and Ruan, Benfang Helen (2019) Precise Measurement of Time Dependent Cell Growth and Detection of Partial Drug Resistance in Infectious Microbial. ACS Infectious Diseases, 5 (7). pp. 1252-1263. doi:10.1021/acsinfecdis.9b00132

Huang, Junqi, Chew, Ting Gang, Gu, Ying, Palani, Saravanan, Kamnev, Anton, Martin, Douglas S., Carter, Nicholas J., Cross, R. A., Oliferenko, Snezhana and Balasubramanian, Mohan K. (2016) Curvature-induced expulsion of actomyosin bundles during cytokinetic ring contraction. eLife, 5 . e21383. doi:10.7554/eLife.21383

Huang, Le, Yang, Bowen, Yi, Haidong, Asif, Amina, Wang, Jiawei, Lithgow, Trevor, Zhang, Han, Minhas, Fayyaz ul Amir Afsar and Yin, Yanbin (2021) AcrDB : a database of anti-CRISPR operons in prokaryotes and viruses. Nucleic Acids Research, 49 (D1). D622-D629. doi:10.1093/nar/gkaa857

Hulin, Michelle T., Armitage, Andrew D., Vicente, Joana G., Holub, E. B., Baxter, Laura, Bates, Helen J., Mansfield, John W., Jackson, Robert W. and Harrison, Richard J. (2018) Comparative genomics of Pseudomonas syringae reveals convergent gene gain and loss associated with specialization onto cherry (Prunus avium). The New Phytologist, 291 (2). pp. 672-696. doi:10.1111/nph.15182

Hunter, Paul J., Teakle, Graham R. and Bending, G. D. (2014) Root traits and microbial community interactions in relation to phosphorus availability and acquisition, with particular reference to Brassica. Frontiers in Plant Science, Volume 5 . doi:10.3389/fpls.2014.00027

Hänsch, Stephanie, Cilli, Elisabetta, Catalano, Giulioilda, Gruppioni, Giorgio, Bianucci, Raffaella, Stenseth, Nils C., Bramanti, Barbara and Pallen, Mark J. (2015) The pla gene, encoding plasminogen activator, is not specific to Yersinia pestis. BMC Research Notes, 8 (1). pp. 1-3. doi:10.1186/s13104-015-1525-x

Iacovidou, Melissa, Barreaux, Priscille, Spencer, Simon E. F., Thomas, Matthew B., Gorsich, Erin E. and Rock, Kat S. (2022) Omitting age-dependent mosquito mortality in malaria models underestimates the effectiveness of insecticide-treated nets. PLoS Computational Biology, 18 (9). e1009540. doi:10.1371/journal.pcbi.1009540

Ijaz, Umer Zeeshan, Gundogdu, Ozan, Keating, Ciara, Eekert, Miriam van, Gibson, Walter, Parkhill, Julian, Abilahi, Faraji, Liseki, Benard, Nguyen, Viet-Anh, Sudgen, Steven, Quince, Christopher , Ensink, Jeroen H. J., Torondel, Belen and Walker, Alan W. (2022) Analysis of pit latrine microbiota reveals depth-related variation in composition, and key parameters and taxa associated with latrine fill-up rate. Frontiers in Microbiology, 13 . 960747. doi:10.3389/fmicb.2022.960747

Inahashi, Yuki, Zhou, Shanshan, Bibb, Maureen J., Song, Lijiang, Al-Bassam, Mahmoud M., Bibb, Mervyn J. and Challis, Gregory L. (2017) Watasemycin biosynthesis in Streptomyces venezuelae : thiazoline C-methylation by a type B radical-SAM methylase homologue. Chemical Science, 8 (4). pp. 2823-2831. doi:10.1039/c6sc03533g

Ingham, Victoria A., Jones, Christopher M., Pignatelli, Patricia, Balabanidou, Vasileia, Vontas, John, Wagstaff, Simon C., Moore, Jonathan D. and Ranson, Hilary (2014) Dissecting the organ specificity of insecticide resistance candidate genes in Anopheles gambiae : known and novel candidate genes. BMC Genomics, Volume 15 (Number 1). Article number 1018. doi:10.1186/1471-2164-15-1018

Introini, Viola, Marin-Menendez, Alejandro, Nettesheim, Guilherme, Lin, Yen-Chun, Kariuki, Silvia N., Smith, Adrian L., Jean, Letitia, Brewin, John N., Rees, David C., Cicuta, Pietro, Rayner, Julian C. and Penman, Bridget S. (2022) The erythrocyte membrane properties of beta thalassaemia heterozygotes and their consequences for Plasmodium falciparum invasion. Scientific Reports, 12 (1). 8934. doi:10.1038/s41598-022-12060-4

Jacomin, Anne-Claire, Demeter, Amanda, Gul, Lejla, Lister, Ashleigh, Lipscombe, James, Invernizzi, Rachele, Branchu, Priscilla, Macaulay, Iain, Nezis, I. P. , Kingsley, Robert A., Korcsmaros, Tamas and Hautefort, Isabelle (2022) Computational prediction and experimental validation of Salmonella Typhimurium SopE-mediated fine-tuning of autophagy in intestinal epithelial cells. Frontiers in Cellular and Infection Microbiology, 12 . 834895. doi:10.3389/fcimb.2022.834895

Jadhav, Vaibhav, Hackl, Matthias, Druz, Aliaksandr, Shridhar, Smriti, Chung, Cheng-Yu, Heffner, Kelley M., Kreil, David, Betenbaugh, Mike, Shiloach, Joseph, Barron, Niall, Grillari, Johannes and Borth, Nicole (2013) CHO microRNA engineering is growing up : recent successes and future challenges. Biotechnology Advances, Volume 31 (Number 8). pp. 1501-1513. doi:10.1016/j.biotechadv.2013.07.007

Jameson, Eleanor, Doxey, Andrew C., Airs, Ruth, Purdy, Kevin J., Murrell, J. C. (J. Colin) and Chen, Yin (2016) Metagenomic data-mining reveals contrasting microbial populations responsible for trimethylamine formation in human gut and marine ecosystems. Microbial Genomics, 2 (9). doi:10.1099/mgen.0.000080

Jameson, Eleanor, Fu, Tiantian, Brown, Ian R., Paszkiewicz, Konrad, Purdy, Kevin J., Frank, Stefanie and Chen, Yin (2015) Anaerobic choline metabolism in microcompartments promotes growth and swarming of Proteus mirabilis. Environmental Microbiology, 18 . pp. 2886-2898. doi:10.1111/1462-2920.13059

Jameson, Eleanor, Quareshy, Mussa and Chen, Yin (2018) Methodological considerations for the identification of choline and carnitine-degrading bacteria in the gut. Methods, 149 . pp. 42-48. doi:10.1016/j.ymeth.2018.03.012

Jameson, Eleanor, Stephenson, Jason, Jones, Helen J., Millard, Andrew D., Kaster, K., Purdy, Kevin J., Airs, R., Murrell, J. C. (J. Colin) and Chen, Yin (2019) Deltaproteobacteria (Pelobacter) and Methanococcoides are responsible for choline-dependent methanogenesis in a coastal saltmarsh sediment. ISME Journal, 13 (2). pp. 277-289. doi:10.1038/s41396-018-0269-8

Jamy, Mahwash, Foster, Rachel, Barbera, Pierre, Czech, Lucas, Kozlov, Alexey, Stamatakis, Alexandros, Bending, G. D., Hilton, Sally, Bass, David and Burki, Fabien (2020) Long-read metabarcoding of the eukaryotic rDNA operon to phylogenetically and taxonomically resolve environmental diversity. Molecular Ecology Resources, 20 (2). pp. 429-443. doi:10.1111/1755-0998.13117

Janezic, Sandra, Dingle, Kate, Alvin, Joseph, Accetto, Tomaž, Didelot, Xavier, Crook, Derrick W., Lacy, D. Borden and Rupnik, Maja (2020) Comparative genomics of Clostridioides difficile toxinotypes identifies module-based toxin gene evolution. Microbial Genomics, 6 (10). doi:10.1099/mgen.0.000449

Jannat, Shopan, Mou, Haipeng, Zhang, Lili, Zhang, Changtong, Ma, Weiwei, Walsh, John A., Hu, Zhongyuan, Yang, Jinghua and Zhang, Mingfang (2017) Eukaryotic translation initiation factor 2B-beta (eIF2B β), a new class of plant virus resistance gene. The Plant Journal, 90 (5). pp. 929-940. doi:10.1111/tpj.13519

Jayal, Ambikesh, Johns, Benjamin E., Purdy, Kevin J. and Maddocks, Sarah E. (2017) Draft genome sequence of Pseudomonas aeruginosa ATCC 9027, originally isolated from an outer ear infection. Genome Announcements, 5 (48). e01397-17. doi:10.1128/genomeA.01397-17

Jayant, Kumar, Habib, Nagy, Huang, Kai W., Podda, Mauro, Warwick, Jane and Arasaradnam, Ramesh P. (2020) Immunological basis of genesis of hepatocellular carcinoma : unique challenges and potential opportunities through immunomodulation. Vaccines, 8 (2). pp. 1-12. 247. doi:10.3390/vaccines8020247

Jeanneret, Raphaël, Pushkin, Dmitri O., Kantsler, Vasily and Polin, Marco (2016) Entrainment dominates the interaction of microalgae with micron-sized objects. Nature Communications, 7 . 12518. doi:10.1038/ncomms12518

Jeanneret, Raphaël, Pushkin, Dmitri O. and Polin, Marco (2019) Confinement enhances the diversity of microbial flow fields. Physical Review Letters, 123 (24). 248102. doi:10.1103/PhysRevLett.123.248102

Jia, Jian-An, Zhang, Shuqin, Bai, Xin, Fang, Meng, Chen, Shipeng, Liang, Xiaotao, Zhu, Shanfeng, Wong, Danny Ka-Ho, Zhang, Anye, Feng, Jianfeng, Sun, Fengzhu and Gao, Chunfang (2022) Sparse logistic regression revealed the associations between HBV PreS quasispecies and hepatocellular carcinoma. Virology Journal, 19 (1). 114. doi:10.1186/s12985-022-01836-9

Jiang, Feng, Wang, Xia, Wang, Bei, Chen, Lihong, Zhao, Zhendong, Waterfield, Nicholas R., Yang, Guowei and Jin, Qi (2016) The pseudomonas aeruginosa Type VI secretion PGAP1-like effector induces host autophagy by activating endoplasmic reticulum stress. Cell Reports, 16 (6). pp. 1502-1509. doi:10.1016/j.celrep.2016.07.012

Jiang, Wen-Xin, Li, Ping-Yi, Chen, Xiu-Lan, Zhang, Yi-Shuo, Wang, Jing-Ping, Wang, Yan-Jun, Sheng, Qi, Sun, Zhong-Zhi, Qin, Qi-Long, Ren, Xue-Bing, Wang, Peng, Song, Xiao-Yan, Chen, Yin and Zhang, Yu-Zhong (2022) A pathway for chitin oxidation in marine bacteria. Nature Communications, 13 (1). 5899. doi:10.1038/s41467-022-33566-5

Jiménez, Diego Javier, Öztürk, Başak, Wei, Ren, Bugg, Timothy D. H., Amaya Gomez, Carol Viviana, Salcedo Galan, Felipe, Castro-Mayorga, Jinneth Lorena, Saldarriaga, Juan Fernando, Tarazona, Natalia Andrea and Zhou, Ning-Yi (2022) Merging plastics, microbes, and enzymes : highlights from an international workshop. Applied and Environmental Microbiology . doi:10.1128/aem.00721-22

Johnson, Connah G. M., Fletcher, Alexander G. and Soyer, Orkun S. (2022) ChemChaste : simulating spatially inhomogeneous biochemical reaction–diffusion systems for modeling cell–environment feedbacks. GigaScience, 11 . giac051. doi:10.1093/gigascience/giac051

Jolles, Anna, Gorsich, Erin E., Gubbins, Simon, Beechler, Brianna, Buss, Peter, Juleff, Nick, de Klerk-Lorist, Lin-Mari, Maree, Francois, Perez-Martin, Eva, van Schalkwyk, O. L., Scott, Katherine, Zhang, Fuquan, Medlock, Jan and Charleston, Bryan (2021) Endemic persistence of a highly contagious pathogen : foot-and-mouth disease in its wildlife host. Science, 374 (6563). pp. 104-109. doi:10.1126/science.abd2475

Jones, C. W. (Christopher W.), Wang, J. C., Briehl, R. W. and Taylor, Matthew S. (2005) Measuring forces between protein fibers by microscopy. Biophysical Journal, Vol.88 (No.4). pp. 2433-2441. doi:10.1529/biophysj.104.050856

Jones, Mathew W., Mantovani, Giuseppe, Blindauer, Claudia A., Ryan, Sinead M., Wang, Xuexuan, Brayden, David J. and Haddleton, David M. (2012) Direct peptide bioconjugation/PEGylation at tyrosine with linear and branched polymeric diazonium salts. Journal of the American Chemical Society, 134 (17). pp. 7406-7413. doi:10.1021/ja211855q

Jones, Rebekah A., Shropshire, Holly, Zhao, Caimeng, Murphy, Andrew, Lidbury, Ian, Wei, Tao, Scanlan, David J. and Chen, Yin (2021) Phosphorus stress induces the synthesis of novel glycolipids in Pseudomonas aeruginosa that confer protection against a last-resort antibiotic. ISME Journal, 15 . pp. 3303-3314. doi:10.1038/s41396-021-01008-7

Jordan, Robert W., Smith, Nicholas A., Saithna, Adnan, Sprowson, Andrew P. and Foguet, Pedro (2014) Sensitivities, specificities, and predictive values of microbiological culture techniques for the diagnosis of prosthetic joint infection. BioMed Research International, Volume 2014 . pp. 1-5. Article number 180416. doi:10.1155/2014/180416

(2017) A comparative phase I study of combination, homologous subtype-C DNA, MVA, and Env gp140 protein/adjuvant HIV vaccines in two immunization regimes. Frontiers in Immunology, 8 . 149. doi:10.3389/fimmu.2017.00149

Joubert, Fanny, Yeo, R. Paul, Sharples, Gary J., Musa, Osama M., Hodgson, David R. W. and Cameron, Neil R. (2015) Preparation of an antibacterial poly(ionic liquid) graft copolymer of hydroxyethyl cellulose. Biomacromolecules, 16 (12). pp. 3970-3979. doi:10.1021/acs.biomac.5b01300

Júnior, José Renato Pattaro, Caruso, Ícaro Putinhon, de Sá, Jéssica Maróstica, Mezalira, Taniara Suelen, de Souza Lima, Diego, Pilau, Eduardo Jorge, Roper, David I., Fernandez, Maria Aparecida and Vicente Seixas, Flavio Augusto (2022) Characterization of secondary structure and thermal stability by biophysical methods of the D-alanyl,D-alanine ligase B protein from Escherichia coli. Protein & Peptide Letters, 29 (5). pp. 448-459. doi:10.2174/0929866529666220405104446

Kadir, Tuty Asmawaty Abdul, Mannan, Ahmad A., Kierzek, Andrzej M., McFadden, Johnjoe and Shimizu, Kazuyuki (2010) Modeling and simulation of the main metabolism in Escherichia coli and its several single-gene knockout mutants with experimental verification. Microbial Cell Factories, 9 . 88. doi:10.1186/1475-2859-9-88

Kamau, E., Onyango, C. O., Otieno, G. P., Kiyuka, P. K., Agoti, C. N., Medley, G. F., Cane, P. A., Nokes, D. James and Munywoki, P. K. (2019) An intensive, active surveillance reveals continuous invasion and high diversity of rhinovirus in households. Journal of Infectious Diseases, 219 (7). pp. 1049-1057. doi:10.1093/infdis/jiy621

Kamennaya, Nina, Geraki, Kalotina, Scanlan, David J. and Zubkov, Mikhail V. (2020) Accumulation of ambient phosphate into the periplasm of marine bacteria is proton motive force dependent. Nature Communications, 11 (1). 2642. doi:10.1038/s41467-020-16428-w

Kantsler, Vasily, Ontañón-McDonald, Elena, Kuey, Cansu, Ghanshyam, Manjari J. , Roffin, Maria Chiara and Asally, Munehiro (2020) Pattern engineering of living bacterial colonies using meniscus-driven fluidic channels. ACS Synthetic Biology, 9 (6). pp. 1277-1283. doi:10.1021/acssynbio.0c00146

Kaplan, Elise, Greene, Nicholas P., Crow, Allister and Koronakis, Vassilis (2018) Insights into bacterial lipoprotein trafficking from a structure of LolA bound to the LolC periplasmic domain. Proceedings of the National Academy of Sciences of the United States of America, 115 (31). E7389-E7397. 201806822. doi:10.1073/pnas.1806822115

Karikari, Thomas K. and Aleksic, Jelena (2015) Neurogenomics : an opportunity to integrate neuroscience, genomics and bioinformatics research in Africa. Applied & translational genomics, 5 . pp. 3-10. doi:10.1016/j.atg.2015.06.004

Karikari, Thomas K. and Quansah, Emmanuel (2015) Neurogenomics : challenges and opportunities for Ghana. Applied & translational genomics, 5 . pp. 11-14. doi:10.1016/j.atg.2015.06.002

Karlikowska, Magdalena, Singh, Albel, Bhatt, Apoorva, Ott, Sascha, Bottrill, Andrew R., Besra, Gurdyal S. and Fullam, Elizabeth (2021) Biochemical and phenotypic characterisation of the Mycobacterium smegmatis transporter UspABC. The Cell Surface, 7 . 100052. doi:10.1016/j.tcsw.2021.100052

Karpinets, Tatiana V. , Greenwood , Duncan J., Sams, Carl E. and Ammons, John T. (2006) RNA:protein ratio of the unicellular organism as a characteristic of phosphorous and nitrogen stoichiometry and of the cellular requirement of ribosomes for protein synthesis. BMC Biology, Vol.4 (No.30). doi:10.1186/1741-7007-4-30

Kassaar, Omar, Schwarz-Linek, Ulrich, Blindauer, Claudia A. and Stewart, Alan J. (2015) Plasma free fatty acid levels influence Zn2+-dependent histidine-rich glycoprotein-heparin interactions via an allosteric switch on serum albumin. Journal of Thrombosis and Haemostasis, 13 (1). pp. 101-110. doi:10.1111/jth.12771

Kaur, Amandeep, Hernandez Fernaud, Juan Ramon, Aguilo-Ferretjans, Maria del Mar, Wellington, E. M. H. and Christie-Oleza, Joseph Alexander (2017) 100 days of marine Synechococcus – Ruegeria pomeroyi interaction, a detailed analysis of the exoproteome. Environmental Microbiology, 20 (2). pp. 785-799. doi:10.1111/1462-2920.14012

Kaur, Inderpreet, Purves, Joanne, Harwood, Matthew, Ketley, Julian M., Andrew, Peter W., Waldron, Kevin J. and Morrissey, Julie A. (2022) Role of horizontally transferred copper resistance genes in Staphylococcus aureus and Listeria monocytogenes. Microbiology, 168 (4). doi:10.1099/mic.0.001162

Kaverina, Irina and Straube, Anne (2011) Regulation of cell migration by dynamic microtubules. Seminars in Cell & Developmental Biology, Volume 22 (Number 9). pp. 968-974. doi:10.1016/j.semcdb.2011.09.017

Kay, Gemma L., Sergeant, Martin J., Giuffra, Valentina, Bandiera, Pasquale, Milanese, Marco, Bramanti, Barbara, Bianucci, Raffaella and Pallen, Mark J. (2014) Recovery of a medieval Brucella melitensis genome using shotgun metagenomics. mBio, Volume 5 (Number 4). Article number e01337-14. doi:10.1128/mBio.01337-14

Kay, Gemma L., Sergeant, Martin J., Zhou, Zhemin, Chan, Jacqueline, Millard, Andrew D., Quick, Joshua, Szikossy, Ildikó, Pap, Ildikó, Spigelman, Mark, Loman, Nicholas J., Achtman, Mark, Donoghue, Helen D. and Pallen, Mark J. (2015) Eighteenth-century genomes show that mixed infections were common at time of peak tuberculosis in Europe. Nature Communications, Volume 6 . pp. 1-9. Article number 6717. doi:10.1038/ncomms7717

Kearns, Daniel B., Luhur, Johana, Chan, Helena, Kachappilly, Benson, Mohamed, Ahmed, Morlot, Cécile, Awad, Milena, Lyras, Dena, Taib, Najwa, Gribaldo, Simonetta, Rudner, David Z. and Rodrigues, Christopher D.A. (2020) A dynamic, ring-forming MucB / RseB-like protein influences spore shape in Bacillus subtilis. PLoS Genetics, 16 (12). e1009246. doi:10.1371/journal.pgen.1009246

Keeling, Matt J., Dyson, Louise, Guyver-Fletcher, Glen, Holmes, Alexander, Semple, Malcolm G., Tildesley, Michael J. and Hill, Edward M. (2022) Fitting to the UK COVID-19 outbreak, short-term forecasts and estimating the reproductive number. Statistical Methods in Medical Research , 31 (9). pp. 1716-1737. doi:10.1177/09622802211070257

Keeling, Matthew James, Datta, Samik, Franklin, Daniel, Flatman, Ivor, Wattam, Andy, Brown, Mike and Budge, Giles E. (2017) Efficient use of sentinel sites : detection of invasive honeybee pests and diseases in the UK. Journal of The Royal Society Interface, 14 (129). 20160908. doi:10.1098/rsif.2016.0908

Kemen, Eric, Gardiner, Anastasia, Schultz-Larsen, Torsten, Kemen, Ariane C., Balmuth, Alexi L., Robert-Seilaniantz, Alexandre, Bailey, Kate, Holub, E. B., Studholme, David J., MacLean, Daniel and Jones, Jonathan D. G. (2011) Gene gain and loss during evolution of obligate parasitism in the white rust pathogen of Arabidopsis thaliana. PLoS Biology, Vol.9 (No.7). Article No. e1001094 . doi:10.1371/journal.pbio.1001094

Kendrick, Felicity, Evans, Neil D., Arnulf, Bertrand, Avet-Loiseau, Hervé, Decaux, Olivier, Dejoie, Thomas, Fouquet, Guillemette, Guidez, Stéphanie, Harel, Stéphanie, Hebraud, Benjamin, Javaugue, Vincent, Richez, Valentine, Schraen, Susanna, Touzeau, Cyrille, Moreau, Philippe, Leleu, Xavier, Harding, Stephen and Chappell, Michael J. (2017) Analysis of a compartmental model of endogenous immunoglobulin G metabolism with application to multiple myeloma. Frontiers in Physiology, 8 . 149. doi:10.3389/fphys.2017.00149

Kengmo Tchoupa, Arnaud, Watkins, Kate E., Jones, Rebekah A., Kuroki, Agnès, Alam, Mohammad Tauqeer, Perrier, Sébastien, Chen, Yin and Unnikrishnan, Meera (2020) The type VII secretion system protects Staphylococcus aureus against antimicrobial host fatty acids. Scientific Reports, 10 (1). 14838. doi:10.1038/s41598-020-71653-z

Kerr, Rachel, Fairbairn, Julia A., Merritt, Andrew T. and Bugg, Timothy D. H. (2021) Peptidomimetic analogues of an Arg-Trp-x-x-Trp motif responsible for interaction of translocase MraY with bacteriophage phiX174 lysis protein E. Bioorganic & Medicinal Chemistry, 52 . 116502. doi:10.1016/j.bmc.2021.116502

(2020) Effectiveness of monovalent rotavirus vaccine against hospitalization with acute rotavirus gastroenteritis in Kenyan children. Clinical Infectious Diseases, 70 (11). pp. 2298-2305. doi:10.1093/cid/ciz664

Kim, Dae-Wi, Thawng, Cung Nawl, Lee, Kihyun, Wellington, E. M. H. and Cha, Chang-Jun (2019) A novel sulfonamide resistance mechanism by two-component flavin-dependent monooxygenase system in sulfonamide-degrading actinobacteria. Environment International, 127 . pp. 206-215. doi:10.1016/j.envint.2019.03.046

King, Hayley C., Khera-Butler , Tanya, James, Phillip, Oakley, Brian B., Erenso, Girume, Aseffa, Abraham, Knight, Robert, Wellington, E. M. H. and Courtenay, Orin (2017) Environmental reservoirs of pathogenic mycobacteria across the Ethiopian biogeographical landscape. PLoS One, 12 (3). e0173811. doi:10.1371/journal.pone.0173811

King, Jason S., Humphreys, Daniel, Rohn, Jennifer L., Unnikrishnan, Meera, Gutierrez, Maximilano G. and Mostowy, Serge (2020) The great host-pathogen war : U.K. cellular microbiology meeting 2020. Cellular Microbiology, 22 (11). e13248. doi:10.1111/cmi.13248

Kiskinis, Evangelos, Chatzeli, Lemonia, Curry, Edward, Kaforou, Myrsini, Frontini, Andrea, Cinti, Saverio, Montana, Giovanni, Parker, Malcolm G. and Christian, Mark (2014) RIP140 represses the “Brown-in-White” adipocyte program including a futile cycle of triacyclglycerol breakdown and synthesis. Molecular Endocrinology, Volume 28 (Number 3). pp. 344-356. doi:10.1210/me.2013-1254

Klug, Dana M., Idiris, Fahima I. M., Blaskovich, Mark A. T., von Delft, Frank, Dowson, Christopher G., Kirchhelle, Claas, Roberts, Adam P., Singer, Andrew C. and Todd, Matthew H. (2021) There is no market for new antibiotics : this allows an open approach to research and development. Wellcome Open Research, 6 . 146. doi:10.12688/wellcomeopenres.16847.1

Knight, Daniel R., Imwattana, Korakrit, Kullin, Brian, Guerrero-Araya, Enzo, Paredes-Sabja, Daniel, Didelot, Xavier, Dingle, Kate E., Eyre, David W., Rodríguez, César Cabrera and Riley, Thomas V. (2021) Major genetic discontinuity and novel toxigenic species in Clostridioides difficile taxonomy. eLife, 10 . e64325. doi:10.7554/elife.64325

Kong, Chow-Seng, Ordoñez, Alexandra Almansa, Turner, Sarah, Tremaine, Tina, Muter, Joanne, Lucas, Emma S., Salisbury, Emma, Vassena, Rita, Tiscornia, Gustavo, Fouladi-Nashta, Ali, Hartshorne, Geraldine M., Brosens, Jan J. and Brighton, Paul (2021) Embryo biosensing by uterine natural killer cells determines endometrial fate decisions at implantation. The FASEB Journal, 35 (4). e21336. doi:10.1096/fj.202002217R

Konstantopoulou, Marina, Slator, Paddy J., Taylor, Charles R., Wellington, E. M. H., Allison, Gordon, Harper, Andrea L., Bancroft, Ian and Bugg, Timothy D. H. (2017) Variation in susceptibility to microbial lignin oxidation in a set of wheat straw cultivars : influence of genetic, seasonal and environmental factors. Nordic Pulp and Paper Research Journal, 32 (4). pp. 493-507.

Kothamachu, Varun B., Feliu, Elisenda, Cardelli, Luca and Soyer, Orkun S. (2015) Unlimited multistability and Boolean logic in microbial signalling. Journal of The Royal Society Interface, Volume 12 (Number 108). pp. 1-9. Article number 20150234. doi:10.1098/rsif.2015.0234

Kowalczyk, Agnieszka, Price, Oliver R., van der Gast, Christopher J., Finnegan, Christopher J., van Egmond, Roger A., Schäfer, Hendrik and Bending, G. D. (2016) Spatial and temporal variability in the potential of river water biofilms to degrade p-nitrophenol. Chemosphere, 164 . pp. 355-362. doi:10.1016/j.chemosphere.2016.08.095

Krašovec, Rok, Belavkin, Roman V., Aston, John A. D., Channon, Alastair, Aston, Elizabeth, Rash, Bharat M., Kadirvel, Manikandan, Forbes, Sarah and Knight, C. G. (Christopher G.) (2014) Mutation rate plasticity in rifampicin resistance depends on Escherichia coli cell–cell interactions. Nature Communications, Volume 5 . Article number 3742. doi:10.1038/ncomms4742

Krishnan, Nithya S., Abimbola, Aisha, Machan, Nandhini, Daga, Sunil, Gopalakrishnan, Kishore, Lam, ForTai, Tan, LamChin, Kashi, Habib, Imray, Christopher H.E., Zehnder, Daniel, Collins, Claire Elizabeth, Curtis, Rebecca, Higgins, Robert, Khovanova, N. A. and Briggs, David (2021) HLA antibody incompatible renal transplantation : long-term outcomes similar to deceased donor transplantation. Transplantation Direct, 7 (8). e732. doi:10.1097/TXD.0000000000001183

Kröber, Eileen and Schäfer, Hendrik (2019) Identification of proteins and genes expressed by Methylophaga thiooxydans during growth on dimethylsulfide and their presence in other members of the genus. Frontiers in Microbiology, 10 . 1132. doi:10.3389/fmicb.2019.01132

Kshirsagar, Meghana, Schleker, Sylvia, Carbonell, Jaime and Klein-Seetharaman, Judith (2015) Techniques for transferring host-pathogen protein interactions knowledge to new tasks. Frontiers in Microbiology, 6 . 36. doi:10.3389/fmicb.2015.00036

Kulick, Stefan, Moccia, Claudia, Didelot, Xavier, Falush, Daniel, Kraft, Christian and Suerbaum, Sebastian (2008) Mosaic DNA imports with interspersions of recipient sequence after natural transformation of Helicobacter pylori. PLOS One, Vol.3 (No.11). doi:10.1371/journal.pone.0003797

EUCLIDS Consortium (Including:

). (2022) Variation in CFHR3 determines susceptibility to meningococcal disease by controlling factor H concentrations. The American Journal of Human Genetics, 109 (9). pp. 1680-1691. doi:10.1016/j.ajhg.2022.08.001

Kumari, Pooja and Sampath, Karuna (2015) cncRNAs : Bi-functional RNAs with protein coding and non-coding functions. Seminars in Cell & Developmental Biology, 47-48 . pp. 40-51. doi:10.1016/j.semcdb.2015.10.024

Kunz, Cornelia, Friede, Tim, Parsons, Nicholas R., Todd, Susan and Stallard, Nigel (2014) Data-driven treatment selection for seamless phase II/III trials incorporating early-outcome data. Pharmaceutical Statistics, Volume 13 (Number 4). pp. 238-246. doi:10.1002/pst.1619

Kunz, Cornelia Ursula, Jörgens, Silke, Bretz, Frank, Stallard, Nigel, Van Lancker, Kelly, Xi, Dong, Zohar, Sarah, Gerlinger, Christoph and Friede, Tim (2020) Clinical trials impacted by the COVID-19 pandemic : adaptive designs to the rescue? Statistics in Biopharmaceutical Research, 12 (4). pp. 461-477. doi:10.1080/19466315.2020.1799857

Kura, Klodeta, Collyer, Benjamin, Toor, Jaspreet, Truscott, James E., Hollingsworth, T. Déirdre, Keeling, Matthew James and Anderson, Roy M. (2020) Policy implications of the potential use of a novel vaccine to prevent infection with Schistosoma mansoni with or without mass drug administration. Vaccine, 38 (28). pp. 4379-4386. doi:10.1016/j.vaccine.2020.04.078

Kuroki, Agnès, Kengmo Tchoupa, Arnaud, Hartlieb, Matthias, Peltier, Raoul, Locock, Katherine E. S., Unnikrishnan, Meera and Perrier, Sébastien (2019) Targeting intracellular, multi-drug resistant Staphylococcus aureus with guanidinium polymers by elucidating the structure-activity relationship. Biomaterials, 217 . 119249. doi:10.1016/j.biomaterials.2019.119249

Kuru, Erkin, Radkov, Atanas, Meng, Xin, Egan, Alexander, Alvarez, Laura, Dowson, Amanda, Booher, Garrett, Breukink, Eefjan, Roper, David I., Cava, Felipe, Vollmer, Waldemar, Brun, Yves and VanNieuwenhze, Michael S. (2019) Mechanisms of incorporation for D-amino acid probes that target peptidoglycan biosynthesis. ACS Chemical Biology, 14 (12). pp. 2745-2756. doi:10.1021/acschembio.9b00664

Kästle, Matthias, Merten, Camilla, Hartig, Roland, Kaehne, Thilo, Liaunardy-Jopeace, Ardiyanto, Woessner, Nadine M., Schamel, Wolfgang W., James, John R., Minguet, Susana, Simeoni, Luca and Schraven, Burkhart (2020) Tyrosine 192 within the SH2 domain of the Src-protein tyrosine kinase p56Lck regulates T-cell activation independently of Lck/CD45 interactions. Cell Communication and Signaling, 18 (1). 183. doi:10.1186/s12964-020-00673-z

Lacey, Lauren, Daulton, Emma, Wicaksono, Alfian, Covington, James A. and Quenby, Siobhan (2020) Detection of Group B Streptococcus in pregnancy by vaginal volatile organic compound analysis : a prospective exploratory study. Translational Research, 216 . pp. 23-29. doi:10.1016/j.trsl.2019.09.002

Ladds, Graham, Zervou, Sevasti I., Vatish, Manu, Thornton, Steven and Davey, John (2009) Regulators of G protein signalling proteins in the human myometrium. European Journal of Pharmacology, Vol.610 (No.1-3). pp. 23-28. doi:10.1016/j.ejphar.2009.03.042

Landajuela, Ane, Braun, Martha, Martínez-Calvo, Alejandro, Rodrigues, Christopher D. A., Gomis Perez, Carolina, Doan, Thierry, Rudner, David Z., Wingreen, Ned S. and Karatekin, Erdem (2022) Membrane fission during bacterial spore development requires cellular inflation driven by DNA translocation. Current Biology, 32 (19). pp. 4186-4200. doi:10.1016/j.cub.2022.08.014

Langley, Gareth W., Cain, Ricky, Tyrrell, Jonathan M., Hinchliffe, Philip, Calvopiña, Karina, Tooke, Catherine L., Widlake, Emma, Dowson, Christopher G., Spencer, James, Walsh, Timothy R., Schofield, Christopher J. and Brem, Jürgen (2019) Profiling interactions of vaborbactam with metallo-β-lactamases. Bioorganic & Medicinal Chemistry Letters, 29 (15). pp. 1981-1984. doi:10.1016/j.bmcl.2019.05.031

Lanza, Ben and Parashar, D. (2021) Do support vector machines play a role in stratifying patient population based on cancer biomarkers? Archives of Proteomics and Bioinformatics, 2 (1). pp. 20-38.

(2022) Emergence of methicillin resistance predates the clinical use of antibiotics. Nature, 602 . pp. 135-141. doi:10.1038/s41586-021-04265-w

Laskaris, Paris, Sekine, Takuya and Wellington, E. M. H. (2012) Diversity analysis of Streptomycetes and associated phosphotranspherase genes in soil. PLoS ONE, Vol.7 (No.4). e35756. doi:10.1371/journal.pone.0035756

Lassalle, Florent, Dastgheib, Seyed M. M., Zhao, Fang-Jie, Zhang, Jun, Verbarg, Susanne, Frühling, Anja, Brinkmann, Henner, Osborne, Thomas H., Sikorski, Johannes, Balloux, Francois, Didelot, Xavier, Santini, Joanne M. and Petersen, Jörn (2021) Phylogenomics reveals the basis of adaptation of Pseudorhizobium species to extreme environments and supports a taxonomic revision of the genus. Systematic and Applied Microbiology, 44 (1). 126165. doi:10.1016/j.syapm.2020.126165

Latifi-Navid, Saeid, Ghorashi, Seyed Ali, Siavoshi, Farideh, Linz, Bodo, Massarrat, Sadegh, Khegay, Tanya, Salmanian, Ali-Hatef, Shayesteh, Ali Akbar, Masoodi, Mohsen, Ghanadi, Koroush, Ganji, Azita, Suerbaum, Sebastian, Achtman, Mark, Malekzadeh, Reza and Falush, Daniel (2010) Ethnic and geographic differentiation of helicobacter pylori within Iran. PLoS One, Volume 5 (Number 3). Article number e9645. doi:10.1371/journal.pone.0009645

Latva, Mira, Dedman, Craig J., Wright, Robyn J., Polin, Marco and Christie-Oleza, Joseph A. (2022) Microbial pioneers of plastic colonisation in coastal seawaters. Marine Pollution Bulletin, 179 . 113701. doi:10.1016/j.marpolbul.2022.113701

Ledda, Alice, Cummins, Martina, Shaw, Liam P., Jauneikaite, Elita, Cole, Kevin, Lasalle, Florent, Barry, Deborah, Turton, Jane, Rosmarin, Caryn, Anaraki, Sudy, Wareham, David, Stoesser, Nicole, Paul, John, Manuel, Rohini, Cherian, Benny P. and Didelot, Xavier (2022) Hospital outbreak of carbapenem-resistant Enterobacterales associated with a bla OXA-48 plasmid carried mostly by Escherichia coli ST399. Microbial Genomics, 8 (4). doi:10.1099/mgen.0.000675

Lee, Kihyun, Kim, Dae-Wi, Lee, Do-Hoon, Kim, Yong-Seok, Bu, Ji-Hye, Cha, Ju-Hee, Thawng, Cung Nawl, Hwang, Eun-Mi, Seong, Hoon Je, Sul, Woo Jun, Wellington, Elizabeth M. H., Quince, Christopher and Cha, Chang-Jun (2020) Mobile resistome of human gut and pathogen drives anthropogenic bloom of antibiotic resistance. Microbiome, 8 (1). 2. doi:10.1186/s40168-019-0774-7

Lee, Sarah C., Collins, Richard, Lin, Yu-pin, Jamshad, Mohammed, Broughton, Claire E., Harris, Sarah A., Hanson, Benjamin S, Tognoloni, Cecilia, Parslow, Rosemary A., Terry, Ann E., Rodger, Alison, Smith, Corinne J., Edler, Karen J., Ford, Robert, Roper, David I. and Dafforn, Timothy R. (2019) Nano-encapsulated escherichia coli divisome anchor ZipA, and in complex with FtsZ. Scientific Reports, 9 (1). 18712. doi:10.1038/s41598-019-54999-x

Leng, Daniel J., Greule, Anja, Cryle, Max J. and Tosin, Manuela (2021) Chemical probes reveal the timing of early chlorination in vancomycin biosynthesis. Chemical Communications, 57 (18). pp. 2293-2296. doi:10.1039/D0CC07421G

Leptos, Kyriacos C., Wan, Kirsty Y., Polin, Marco, Tuval, Idan, Pesci, Adriana I. and Goldstein, Raymond E. (2013) Antiphase synchronization in a flagellar-dominance mutant of Chlamydomonas. Physical Review Letters, Volume 111 . Article number 158101. doi:10.1103/PhysRevLett.111.158101

Lepère, Cécile, Ostrowski, Martin, Hartmann, Manuela, Zubkov, Mikhail V. and Scanlan, David J. (2015) In situ associations between marine photosynthetic picoeukaryotes and potential parasites - a role for fungi? Environmental Microbiology Reports, 8 (4). pp. 445-451. doi:10.1111/1758-2229.12339

Leungtongkam, Udomluk, Thummeepak, Rapee, Kitti, Thawatchai, Tasanapak, Kannipa, Wongwigkarn, Jintana, Styles, Kathryn, Wellington, Elizabeth M. H., Millard, Andrew D., Sagona, Antonia P. and Sitthisak, Sutthirat (2020) Genomic analysis reveals high virulence and antibiotic resistance amongst phage susceptible Acinetobacter baumannii. Scientific Reports, 10 . 16154. doi:10.1038/s41598-020-73123-y

Lewsey, Mathew, Surette, Monique, Robertson, Fiona C. , Ziebell, Heiko, Choi, Sun Hee , Ryu, Ki Hyun , Canto, Tomas, Palukaitis, Peter, Payne, Tina, Walsh, John A. and Carr, John P. (2009) The role of the Cucumber mosaic virus 2b protein in viral movement and symptom induction. Molecular Plant - Microbe Interactions, Vol.22 (No.6). pp. 642-654. doi:10.1094/MPMI-22-6-0642

Li, Chun-Yang, Chen, Xiu-Lan, Zhang, Dian, Wang, Peng, Sheng, Qi, Peng, Ming, Xie, Bin-Bin, Qin, Qi-Long, Li, Ping-Yi, Zhang, Xi-Ying, Su, Hai-Nan, Song, Xiao-Yan, Shi, Mei, Zhou, Bai-Cheng, Xun, Lu-Ying, Chen, Yin and Zhang, Yu-Zhong (2017) Structural mechanism for bacterial oxidation of oceanic trimethylamine into trimethylamine N -oxide. Molecular Microbiology, 103 (6). pp. 992-1003. doi:10.1111/mmi.13605

(2015) Ternary structure reveals mechanism of a membrane diacylglycerol kinase. Nature Communications, 6 (1). 10140 . doi:10.1038/ncomms10140

Li, Die, Chen, Jing, Hong, Mei, Wang, Yan, Haddleton, David M., Li, Guang-Zhao and Zhang, Qiang (2021) Cationic glycopolymers with aggregation-induced emission for the killing, imaging, and detection of bacteria. Biomacromolecules, 22 (5). pp. 2224-2232. doi:10.1021/acs.biomac.1c00298

Li, Shen, Oh, Byoung Chol, Chu, Chengyan, Arnold, Antje, Jablonska, Anna, Furtmüller, Georg J., Qin, Hua-Min, Boltze, Johannes, Magnus, Tim, Ludewig, Peter, Janowski, Mirosław, Brandacher, Gerald and Walczak, Piotr (2019) Induction of immunological tolerance to myelinogenic glial-restricted progenitor allografts. Brain, 142 (11). pp. 3456-3472. doi:10.1093/brain/awz275

Li, Shuyu, Spooner, Robert A. , Hampton, Randolph Y., Lord, Mike and Roberts, L. M. (Lynne M.) (2012) Cytosolic entry of Shiga-like toxin A chain from the yeast endoplasmic reticulum requires catalytically active Hrd1p. PLoS ONE, Vol.7 (No.7). e41119. doi:10.1371/journal.pone.0041119

Li, Stephen, Lam, Jenna, Souliotis, Leonidas, Alam, Mohammad Tauqeer and Constantinidou, Chrystala (2022) Posttranscriptional regulation in response to different environmental stresses in Campylobacter jejuni. Microbiology Spectrum, 10 (3). e00203-22. doi:10.1128/spectrum.00203-22

Li, Xiao, Wang, Juan, Shi, Mingxin, Wang, Weishan, Corre, Christophe and Yang, Keqian (2017) Evidence for the formation of ScbR/ScbR2 heterodimers and identification of one of the regulatory targets in Streptomyces coelicolor. Applied Microbiology and Biotechnology, 101 (13). pp. 5333-5340.

Li, Zehua, Pearce, Amanda K., Du, Jianzhong, Dove, Andrew P. and O'Reilly, Rachel K. (2022) Uniform antibacterial cylindrical nanoparticles for enhancing the strength of nanocomposite hydrogels. Journal of Polymer Science, 359 . 131608. doi:10.1002/pol.20210853

Lidbury, Ian, Kimberley, George, Scanlan, David J., Murrell, J. C. (J. Colin) and Chen, Yin (2015) Comparative genomics and mutagenesis analyses of choline metabolism in the marine Roseobacter clade. Environmental Microbiology, 17 (12). pp. 5048-5062. doi:10.1111/1462-2920.12943

Lidbury, Ian, Mausz, Michaela A., Scanlan, David J. and Chen, Yin (2017) Identification of dimethylamine monooxygenase in marine bacteria reveals a metabolic bottleneck in the methylated amine degradation pathway. ISME Journal, 11 . pp. 1592-1601. doi:10.1038/ismej.2017.31

Lidbury, Ian, Murrell, J. C. (J. Colin) and Chen, Yin (2014) Trimethylamine N-oxide metabolism by abundant marine heterotrophic bacteria. Proceedings of the National Academy of Sciences of the United States of America, Volume 111 (Number 7). pp. 2710-2715. doi:10.1073/pnas.1317834111

Lidbury, Ian, Murrell, J. C. (J. Colin) and Chen, Yin (2015) Trimethylamine and trimethylamine N-oxide are supplementary energy sources for a marine heterotrophic bacterium : implications for marine carbon and nitrogen cycling. The ISME Journal, 9 . pp. 760-769. doi:10.1038/ismej.2014.149

Lidbury, Ian D. E. A., Scanlan, David J., Murphy, Andrew R. J., Christie-Oleza, Joseph A., Aguilo-Ferretjans, Maria M., Hitchcock, Andrew and Daniell, Tim J. (2022) A widely distributed phosphate-insensitive phosphatase presents a route for rapid organophosphorus remineralization in the biosphere. Proceedings of the National Academy of Sciences, 119 (5). e2118122119. doi:10.1073/pnas.2118122119

Links, Matthew G., Holub, E. B., Jiang, Rays H. Y., Sharpe, Andrew G., Hegedus, Dwayne, Beynon, Elena, Sillito, Dean, Clarke, Wayne E., Uzuhashi, Shihomi and Borhan, Mohammad Hossein (2011) De novo sequence assembly of Albugo candida reveals a small genome relative to other biotrophic oomycetes. BMC Genomics, Vol.12 (No.1). Article No. 503. doi:10.1186/1471-2164-12-503

Liu, Bowen, Chan, Helena, Bauda, Elda, Contreras-Martel, Carlos, Bellard, Laure, Villard, Anne-Marie, Mas, Caroline, Neumann, Emmanuelle, Fenel, Daphna, Favier, Adrien, Serrano, Monica, Henriques, Adriano O., Rodrigues, Christopher D.A. and Morlot, Cecile (2022) Structural insights into ring-building motif domains involved in bacterial sporulation. Journal of Structural Biology, 214 (1). 107813. doi:10.1016/j.jsb.2021.107813

Liu, Di, Mannan, Ahmad A., Han, Yichao, Oyarzún, Diego A. and Zhang, Fuzhong (2018) Dynamic metabolic control : towards precision engineering of metabolism. Journal of Industrial Microbiology & Biotechnology, 45 (7). pp. 535-543. 9. doi:10.1007/s10295-018-2013-9

Liu, Yujie, Claydon, Rory, Polin, Marco and Brumley, Douglas R. (2018) Transitions in synchronization states of model cilia through basal-connection coupling. Journal of The Royal Society Interface, 15 (147). doi:10.1098/rsif.2018.0450

Lizio, Maria Giovanna, Campana, Mario, De Poli, Matteo, Jefferies, Damien F., Cullen, William, Andrushchenko, Valery, Chmel, Nikola Paul, Bouř, Petr, Khalid, Syma, Clayden, Jonathan, Blanch, Ewan, Rodger, Alison and Webb, Simon J. (2021) Insight into the mechanism of action and peptide‐membrane interactions of Aib‐rich peptides : multitechnique experimental and theoretical analysis. Chembiochem, 22 (9). pp. 1656-1667. doi:10.1002/cbic.202000834

Llewellyn, David, Srirajaskanthan, Rajaventhan, Vincent, Royce, Guy, Catherine, Drakou, Eftychia E., Aylwin, Simon, Grossman, Ashley, Ramage, John K. and Dimitriadis, Georgios K. (2021) Calcitonin secreting neuroendocrine neoplasms of the lung : a systematic review and narrative synthesis. Endocrine Connections, 10 (4). pp. 447-461. doi:10.1530/EC-21-0071

Lockey, Christine, Edwards, Richard J., Roper, David I. and Dixon, Ann M. (2020) The extracellular domain of two-component system sensor kinase VanS from streptomyces coelicolor binds Vancomycin at a newly identified binding site. Scientific Reports, 10 (1). 5727.

Lockey, Christine, Young, Hannah, Brown, Jessica and Dixon, Ann M. (2022) Characterization of interactions within the Igα/Igβ transmembrane domains of the human B-cell receptor provides insights into receptor assembly. Journal of Biological Chemistry, 298 (5). 101843. doi:10.1016/j.jbc.2022.101843

Lowery, Richard, Gibson, Matthew I., Thompson, Richard C. and Fullam, Elizabeth (2015) Deuterated carbohydrate probes as ‘label-free’ substrates for probing nutrient uptake in mycobacteria by nuclear reaction analysis. Chemical communications, 51 (23). pp. 4838-4841. doi:10.1039/c4cc09588j

Lysenko, Elena S., Clarke, Thomas B., Shchepetov, Mikhail, Ratner, Adam J., Roper, David I., Dowson, Christopher G. and Weiser, Jeffrey N. (2007) Nod1 signaling overcomes resistance of S. pneumoniae to opsonophagocytic killing. PL o S Pathogens , Vol.3 (No.8). pp. 1073-1081. doi:10.1371/journal.ppat.0030118

Lythgoe, Katrina A., Pellis, Lorenzo and Fraser, Christophe (2013) Is HIV short-sighted? Insights from a multistrain nested model. Evolution, Volume 67 (Number 10). pp. 2769-2782. doi:10.1111/evo.12166

FLU GOLD study group (Including: Löwensteyn, Yvette N., Nair, Harish, Nunes, Marta C., van Roessel, Ichelle, Vernooij, Femke S., Willemsen, Joukje, Bont, Louis J. and Mazur, Natalie I.). (2021) Estimated impact of maternal vaccination on global paediatric influenza-related in-hospital mortality : a retrospective case series. eClinicalMedicine, 37 . 100945. doi:10.1016/j.eclinm.2021.100945

Ma, Ruo-Chan, Chu, Yi-Xuan, Wang, Jing, Wang, Cheng, Leigh, Mary Beth, Chen, Yin and He, Ruo (2021) Stable-isotopic and metagenomic analyses reveal metabolic and microbial link of aerobic methane oxidation coupled to denitrification at different O2 levels. Science of The Total Environment, 764 . 142901. doi:10.1016/j.scitotenv.2020.142901

MacGregor-Chatwin, C., Jackson, P. J., Sener, M., Chidgey, J. W., Hitchcock, A., Qian, P., Mayneord, G. E., Johnson, M. P., Luthey-Schulten, Z., Dickman, M. J., Scanlan, David J. and Hunter, C. N. (2019) Membrane organization of photosystem I complexes in the most abundant phototroph on Earth. Nature Plants, 5 (8). pp. 879-889. doi:10.1038/s41477-019-0475-z

MacQueen, Alice, Tian, Dacheng, Chang, Wenhan, Holub, E. B., Kreitman, Martin and Bergelson, Joy (2019) Population genetics of the highly polymorphic RPP8 gene family. Genes, 10 (9). e691. doi:10.3390/genes10090691

Maddocks, Sarah Elizabeth, Johns, Benjamin, Purdy, Kevin J. and Tucker, Nicholas (2015) Phenotypic and genotypic characteristics of small colony variants and their role in chronic infection. Microbiology Insights . pp. 15-23. doi:10.4137/MBI.S25800

Magombedze, Gesham, Shiri, Tinevimbo, Eda, Shigetoshi and Stabel, Judy R. (2017) Inferring biomarkers for Mycobacterium avium subsp. paratuberculosis infection and disease progression in cattle using experimental data. Scientific Reports, 7 . 44765. doi:10.1038/srep44765

Mahenthiralingam, Eshwar, Baldwin, Adam, Drevinek, Pavel, Vanlaere, Elke, Vandamme, Peter, LiPuma, John J. and Dowson, Christopher G. (2006) Multilocus sequence typing breathes life into a microbial metagenome. PLoS One, Vol.1 (No.1). doi:10.1371/journal.pone.0000017

Malina, J., Scott, Peter and Brabec, V. (2015) Shape-selective recognition of DNA abasic sites by metallohelices : inhibition of human AP endonuclease 1. Nucleic acids research, 43 (11). pp. 5297-5306. doi:10.1093/nar/gkv438

Mannan, Ahmad A., Liu, Di, Zhang, Fuzhong and Oyarzún, Diego A. (2017) Fundamental design principles for transcription-factor-based metabolite biosensors. ACS Synthetic Biology, 6 (10). pp. 1851-1859. doi:10.1021/acssynbio.7b00172

Mannan, Ahmad A., Toya, Yoshihiro, Shimizu, Kazuyuki, McFadden, Johnjoe, Kierzek, Andrzej M. and Rocco, Andrea (2015) Integrating kinetic model of E. coli with genome scale metabolic fluxes overcomes its open system problem and reveals bistability in central metabolism. PLoS One, 10 (10). e0139507. doi:10.1371/journal.pone.0139507

Maric, M., Maculins, T., De Piccoli, Giacomo and Labib, K. (2014) Cdc48 and a ubiquitin ligase drive disassembly of the CMG helicase at the end of DNA replication. Science, 346 (6208). p. 1253596. doi:10.1126/science.1253596

Markovic, Danijela, Bari, Muhammad F., Lu, B., Vatish, Manu and Grammatopoulos, Dimitris (2013) Corticotropin-releasing hormone interacts with interleukin-1 to regulate prostaglandin H synthase-2 expression in human myometrium during pregnancy and labor. Journal of Clinical Endocrinology & Metabolism, Volume 98 (Number 7). pp. 2864-2875. doi:10.1210/jc.2013-1094

Mars, Ruben A. T., Nicolas, Pierre, Ciccolini, Mariano, Reilman, Ewoud, Reder, Alexander, Schaffer, Marc, Mäder, Ulrike, Völker, Uwe, Dijl, Jan Maarten van and Denham, Emma (2015) Small regulatory RNA-induced growth rate heterogeneity of Bacillus subtilis. PLoS Genetics, Volume 11 (Number 3). pp. 1-27. Article number e1005046. doi:10.1371/journal.pgen.1005046

Marsh, Andrew, Casey-Green, Katherine, Probert, Fay, Withall, David M., Mitchell, Daniel A., Dilly, Suzanne J., James, Sean G., Dimitri, W., Ladwa, Sweta R. L., Taylor, Paul C. and Singer, Donald R. J. (2016) Simvastatin sodium salt and fluvastatin interact with human gap junction gamma-3 protein. PLoS One, 11 (2). pp. 1-27. e0148266. doi:10.1371/journal.pone.0148266

Martin, Liam T., Gurnani, Pratik, Zhang, Junliang, Hartlieb, Matthias, Cameron, Neil R., Eissa, Ahmed M. and Perrier, Sébastien (2019) Polydimethylsiloxane-based giant glycosylated polymersomes with tunable bacterial affinity. Biomacromolecules, 20 (3). pp. 1297-1307. doi:10.1021/acs.biomac.8b01709

Marton, Huba L., Styles, Kathryn, Kilbride, Peter, Sagona, Antonia P. and Gibson, Matthew I. (2021) Polymer-mediated cryopreservation of bacteriophages. Biomacromolecules, 22 (12). pp. 5281-5289. doi:10.1021/acs.biomac.1c01187

Marttinen, Pekka, Baldwin, Adam, Hanage, William P., Dowson, Christopher G. and Mahenthiralingam, Eshwar (2008) Bayesian modeling of recombination events in bacterial populations. BMC Bioinformatics, Vol.9 (No.421). doi:10.1186/1471-2105-9-421

Mary, Isabelle, Garczarek, Laurence, Tarran, Glen A. , Kolowrat, Christian , Terry, Matthew J. , Scanlan, David J. , Burkill, Peter H. and Zubkov, Mikhail V. (2008) Diel rhythmicity in amino acid uptake by Prochlorococcus. Environmental Microbiology, Vol.10 (No.8). pp. 2124-2131. doi:10.1111/j.1462-2920.2008.01633.x

Mathijssen, Arnold, Jeanneret, Raphaël and Polin, Marco (2018) Universal entrainment mechanism controls contact times with motile cells. Physical Review Fluids, 3 (3). 033103. doi:10.1103/PhysRevFluids.3.033103

Mausz, Michaela A., Airs, Ruth, Dixon, Joanna, Widdicombe, Claire, Tarran, Glen, Polimene, Luca, Dashfield, Sarah, Beale, Rachael, Scanlan, David J. and Chen, Yin (2022) Microbial uptake dynamics of choline and glycine betaine in coastal seawater. Limnology and Oceanography, 67 (5). pp. 1052-1064. doi:10.1002/lno.12056

McCormack, K., Rabindranath, K., Kilonzo, M., Valery, L., Fraser, C., McIntyre, L., Thomas, S., Rothnie, H., Fluck, N., Gould, I. and Waugh, N. (2007) Systematic review of the effectiveness of preventing and treating Staphylococcus aureus carriage in reducing peritoneal catheter-related infections. Health Technology Assessment, 11 (23). doi:10.3310/hta11230

McDonald, Sarah M., Sarno, Diana, Scanlan, David J. and Zingone, Adriana (2007) Genetic diversity of eukaryotic ultraphytoplankton in the Gulf of Naples during an annual cycle. Aquatic Microbial Ecology, Volume 50 (Number 1). pp. 75-89. doi:10.3354/ame01148

McDowell, A. (Andrew), Barnard, E. (Emma), Nagy, I. (István), Gao, Anna, Tomida, Shuta, Li, Huiying, Eady, Anne, Cove, Jonathan, Nord, Carl Erik and Patrick, Sheila (2012) An expanded multilocus sequence typing scheme for propionibacterium acnes : investigation of 'pathogenic', 'commensal' and antibiotic resistant strains. PLoS ONE, Vol.7 (Vol.7). e41480. doi:10.1371/journal.pone.0041480

Meadows, John C. and Millar, Jonathan B. A. (2008) Latrunculin A delays anaphase onset in fission yeast by disrupting an ase1-independent pathway controlling mitotic spindle stability. Molecular Biology of the Cell, Vol.19 (No.9). pp. 3713-3723. doi:10.1091/mbc.E08-02-0164

Medema, Marnix H, Trefzer, Axel, Kovalchuk, Andriy, van den Berg, Marco, Müller, Ulrike, Heijne, Wilbert, Wu, Liang, Alam, Mohammad T., Ronning, Catherine M, Nierman, William C, Bovenberg, Roel A L, Breitling, Rainer and Takano, Eriko (2010) The sequence of a 1.8-mb bacterial linear plasmid reveals a rich evolutionary reservoir of secondary metabolic pathways. Genome Biology and Evolution, 2 . pp. 212-24. doi:doi: 10.1093/gbe/evq013

Mendum, Tom A., Newcombe, Jane, Mannan, Ahmad A., Kierzek, Andrzej M. and McFadden, Johnjoe (2011) Interrogation of global mutagenesis data with a genome scale model of Neisseria meningitidis to assess gene fitness in vitro and in sera. Genome Biology, 12 . R127. doi:10.1186/gb-2011-12-12-r127

Menon, Navya, Richmond, Daniel, Rahman, Mohammad Rejaur and Menon, Binuraj R. K. (2022) Versatile and facile one-pot biosynthesis for amides and carboxylic acids in E. coli by engineering auxin pathways of plant microbiomes. ACS Catalysis, 12 (4). pp. 2309-2319. doi:10.1021/acscatal.1c04901

Michalopoulou, Vassiliki A., Vicente, Joana G., Studholme, David J. and Sarris, Panagiotis F. (2018) Draft genome sequences of pathotype strains for three pathovars belonging to three Xanthomonas species. Microbiology Resource Announcements, 7 (12). e00923-18. doi:10.1128/MRA.00923-18

Michieletto, Davide, Marenduzzo, Davide and Orlandini, Enzo (2015) Is the kinetoplast DNA a percolating network of linked rings at its critical point? Physical Biology, Volume 12 (Number 3). pp. 1-8. 036001. doi:10.1088/1478-3975/12/3/036001

Michniewski, Slawomir, Redgwell, Tamsin, Grigonyte, Aurelija, Rihtman, Branko, Aguilo‐Ferretjans, Maria, Christie‐Oleza, Joseph, Jameson, Eleanor, Scanlan, David J. and Millard, Andrew D. (2019) Riding the wave of genomics to investigate aquatic coliphage diversity and activity. Environmental Microbiology, 21 (6). pp. 2112-2128. doi:10.1111/1462-2920.14590

Michniewski, Slawomir, Redgwell, Tamsin, Scanlan, David J. and Millard, Andrew D. (2017) Draft genome sequence of Bacteriophage vB_Eco_swan01. Genome Announcements, 5 (28). pp. 1-17. e00501. doi:10.1128/genomeA.00501-17

Mikhaylina, Alevtina, Ksibe, Amira Z., Wilkinson, Rachael C., Smith, Darbi, Marks, Eleanor, Coverdale, James P. C., Fülöp, Vilmos, Scanlan, David J. and Blindauer, Claudia A. (2022) A single sensor controls large variations in zinc quotas in a marine cyanobacterium. Nature Chemical Biology, 18 . pp. 869-877. doi:10.1038/s41589-022-01051-1

Mikhaylina, Alevtina, Scott, Luke, Scanlan, David J. and Blindauer, Claudia A. (2022) A metallothionein from an open ocean cyanobacterium removes zinc from the sensor protein controlling its transcription. Journal of Inorganic Biochemistry, 230 . 111755. doi:10.1016/j.jinorgbio.2022.111755

Miles, Jennifer A., Machattou, Petrina, Nevin-Jones, David, Webb, Michael E., Millard, Andrew, Scanlan, David J. and Taylor, Paul C. (2019) Identification of a cyanobacterial aldehyde dehydrogenase that produces retinoic acid in vitro. Biochemical and Biophysical Research Communications, 510 (1). pp. 27-34. doi:10.1016/j.bbrc.2018.12.171

Millard, Andrew D., Hands-Portman, Ian and Zwirglmaier, Katrin (2014) Morphotypes of virus-like particles in two hydrothermal vent fields on the East Scotia Ridge, Antarctia. Bacteriophage, Volume 4 (Number 1). Article number e28732 . doi:10.4161/bact.28732

Millard, Andrew D. and Mann, Nicholas H. (2006) A temporal and spatial investigation of cyanophage abundance in the Gulf of Aqaba Red Sea. Journal of the Marine Biological Association of the United Kingdom, Vol.86 (No.3). pp. 507-515. doi:10.1017/S0025315406013415

Millard, Andrew D., Scanlan, David J., Gallagher, Connor, Marsh, Andrew and Taylor, Paul C. (2014) Unexpected evolutionary proximity of eukaryotic and cyanobacterial enzymes responsible for biosynthesis of retinoic acid and its oxidation. Molecular BioSystems, 10 (3). pp. 380-383. doi:10.1039/c3mb70447e

Miller, Kate M., Lamagni, Theresa, Hay, Roderick, Cannon, Jeffrey W., Marks, Michael, Bowen, Asha C., Kaslow, David C., Cherian, Thomas, Seale, Anna C., Pickering, Janessa, Daw, Jessica N., Moore, Hannah C., Van Beneden, Chris, Carapetis, Jonathan R. and Manning, Laurens (2022) Standardization of epidemiological surveillance of group A streptococcal cellulitis. Open Forum Infectious Diseases, 9 (Supplement_1). S25-S30. doi:10.1093/ofid/ofac267

Mitchell, Daniel A., Zhang, Qiang , Voorhaar, Lenny, Haddleton, David M., Herath, Shan, Gleinich, Anne S., Randeva, Harpal S., Crispin, Max, Lehnert, Hendrik, Wallis, Russell, Patterson, Steven and Becer, C. Remzi (2017) Manipulation of cytokine secretion in human dendritic cells using glycopolymers with picomolar affinity for DC-SIGN. Chemical Science, 8 (10). pp. 6974-6980. doi:10.1039/c7sc01515a

Mohammed, Khadija Said, Kibinge, Nelson, Prins, Pjotr, Agoti, Charles N., Cotten, Matthew, Nokes, D. James, Brand, Samuel and Githinji, George (2018) Evaluating the performance of tools used to call minority variants from whole genome short-read data. Wellcome Open Research, 3 . 21. doi:10.12688/wellcomeopenres.13538.2

Mombrikotb, Shorok B., Van Agtmaal, Maaike, Johnstone, Emma, Crawley, Michael J., Gweon, Hyun S., Griffiths, Robert I. and Bell, Thomas (2022) The interactions and hierarchical effects of long‐term agricultural stressors on soil bacterial communities. Environmental Microbiology Reports . doi:10.1111/1758-2229.13106

Monaghan, Emma M., Prosser, Naomi S., Witt, Jessica D., Lewis, Katharine E., Nabb, Elizabeth, Keeling, Matt J., Purdy, Kevin J. and Green, Laura E. (2021) Impact of strain variation of Dichelobacter nodosus on disease severity and presence in sheep flocks in England. Frontiers In Veterinary Science, 8 . 713927. doi:10.3389/fvets.2021.713927

Moodley, Yoshan, Linz, Bodo, Bond, Robert P., Nieuwoudt, Martin, Soodyall, Himla, Schlebusch, Carina M., Bernhöft, Steffi, Hale, J. (James), Suerbaum, Sebastian, Mugisha, Lawrence, Van der Merwe, Schalk W. and Achtman, Mark (2012) Age of the association between Helicobacter pylori and man. PLoS Pathogens, Volume 8 (Number 5). Article number e1002693. doi:10.1371/journal.ppat.1002693

Moore, Sam, Hill, Edward M., Dyson, Louise, Tildesley, Michael J. and Keeling, Matt J. (2022) Retrospectively modeling the effects of increased global vaccine sharing on the COVID-19 pandemic. Nature Medicine . doi:10.1038/s41591-022-02064-y (In Press)

Moore, Simon J., Lai, Hung-En, Chee, Soo-Mei, Toh, Ming, Coode, Seth, Chengan, Kameshwari, Capel, Patrick, Corre, Christophe, de los Santos, Emmanuel L. C. and Freemont, Paul S. (2021) A streptomyces venezuelae cell-free toolkit for synthetic biology. ACS Synthetic Biology, 10 (2). pp. 402-411. doi:10.1021/acssynbio.0c00581

Mora-Santos, Maria, Hervas-Aguilar, Maria-America, Sewart, Katharina, Lancaster, Theresa C., Meadows, John C. and Millar, Jonathan B. A. (2016) Bub3-Bub1 binding to Spc7/KNL1 toggles the spindle checkpoint switch by licensing the interaction of Bub1 with Mad1-Mad2. Current Biology, 26 (19). pp. 2642-2650. doi:10.1016/j.cub.2016.07.040

Morcrette, Helen, Kovacs-Simon, Andrea, Tennant, Richard K., Love, John, Wagley, Sariqa, Yang, Zheng R., Studholme, David J., Soyer, Orkun S., Champion, Olivia L., Butler, Clive S. and Titball, Richard W. (2020) Campylobacter jejuni 11168H exposed to penicillin forms persister cells and cells with altered redox protein activity. Frontiers in Cellular and Infection Microbiology, 10 . 565975. doi:10.3389/fcimb.2020.565975

Morelli, Giovanna, Didelot, Xavier, Kusecek, Barica, Schwarz, Sandra, Bahlawane, Christelle, Falush, Daniel, Suerbaum, Sebastian and Achtman, Mark (2010) Microevolution of Helicobacter pylori during prolonged infection of single hosts and within families. PL o S Genetics, Vol.6 (No.7). doi:10.1371/journal.pgen.1001036

(2010) Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity. Nature Genetics, 42 (12). pp. 1140-1143. doi:10.1038/ng.705

Morgan, Ann W., Barrett , Jennifer H., Griffiths, Bridget, Subramanian, Deepak , Robinson, Jim I. , Keyte, Viki H., Ali, Manir, Jones, E. A. (Elizabeth A.), Old, R. W., Ponchel, Frederique , Boylston, Arthur W., Deva Situnayake, R, Markham, Alexander F, Emery, Paul and Isaacs, John D. (2005) Analysis of Fcγ receptor haplotypes in rheumatoid arthritis: FCGR3A remains a major susceptibility gene at this locus, with an additional contribution from FCGR3B. Arthritis Research & Therapy, Vol.8 (No.R5). doi:10.1186/ar1847

Morobe, John Mwita, Kamau, Everlyn, Murunga, Nickson, Gatua, Winfred, Luka, Martha M., Lewa, Clement, Cheruiyot, Robinson, Mutunga, Martin, Odundo, Calleb, Nokes, D. James and Agoti, Charles N. (2021) Trends and intensity of Rhinovirus invasions in Kilifi, coastal Kenya, over a 12-year period, 2007–2018. Open Forum Infectious Diseases, 8 (12). ofab571. doi:10.1093/ofid/ofab571

Moroz, Olga V., Burkitt, William I., Wittkowski, Helmut, He, Wei, Ianoul, Anatoli, Novitskaya, Vera , Xie, Jingjing, Polyakova, Oxana, Lednev, Igor K. , Shekhtman, Alexander, Derrick, Peter J. , Bjoerk, Per, Foell, Dirk and Bronstein, Igor B. (2009) Both Ca2+ and Zn2+ are essential for S100A12 protein oligomerization and function. BMC Biochemistry, Vol.10 (No.11). doi:10.1186/1471-2091-10-11

Morris, Kyle L., Zibaee, Shahin, Chen, Lin, Goedert, Michel, Sikorski, Pawel and Serpell, Louise C. (2013) The structure of cross-β tapes and tubes formed by an octapeptide, αSβ1. Angewandte Chemie International Edition, 52 (8). pp. 2279-2283. doi:10.1002/anie.201207699

Mos, Magdalena, Godfrey, Emma L., Esparza Franco, Manuel A., Richardson, Kathryn, Davey, John and Ladds, Graham (2013) The role of the RACK1 ortholog Cpc2p in modulating pheromone-induced cell cycle arrest in fission yeast. PLoS One, Volume 8 (Number 7). Article number e65927. doi:10.1371/journal.pone.0065927

Moseng, Mitchell A., Lyu, Meinan, Pipatpolkai, Tanadet, Glaza, Przemyslaw, Emerson, Corey C., Stewart, Phoebe L., Stansfeld, Phillip J. and Yu, Edward W. (2021) Cryo-EM structures of CusA reveal a mechanism of metal-ion export. mBio, 12 (2). e00452-21. doi:10.1128/mBio.00452-21

Mulchandani, Ranya, Brehmer, Clare, Butt, Saira, Vishram, Bhavita, Harrison, Melissa, Marchant, Elizabeth, Ferris, Simon, Jorgensen, Frieda, Smith, Robert A., Godbole, Gauri, Jenkins, Claire, Dallman, Timothy J., Verlander, Neville Q., Phin, Nick, Todkill, Daniel, Gharbia, Saheer E. and Hawker, Jeremy (2021) Outbreak of Shiga toxin-producing Escherichia coli O157 linked with consumption of a fast-food product containing imported cucumbers, United Kingdom, August 2020. International Journal of Infectious Diseases, 110 (S1). S62-S68. doi:10.1016/j.ijid.2021.04.001

Murphy, Andrew, Scanlan, David J. , Chen, Yin, Adams, Nathan B. P., Cadman, William A., Bottrill, Andrew R., Bending, G. D., Hammond, John P., Hitchcock, Andrew, Wellington, Elizabeth M. H. and Lidbury, Ian D. E. A. (2021) Transporter characterisation reveals aminoethylphosphonate mineralisation as a key step in the marine phosphorus redox cycle. Nature Communications, 12 (1). 4554. doi:10.1038/s41467-021-24646-z

Murphy, Andrew, Scanlan, David J. , Chen, Yin, Bending, G. D., Hammond, John P., Wellington, Elizabeth M. H. and Lidbury, Ian (2022) 2-Aminoethylphosphonate utilization in pseudomonas putida BIRD-1 is controlled by multiple master regulators. Environmental Microbiology, 24 (4). pp. 1902-1917. doi:10.1111/1462-2920.15959

Murphy, Andrew, Travis, Emma Rachel, Hibberd, Victoria, Porter, David and Wellington, Elizabeth M. H. (2020) Evaluation of a fecal shedding test to detect badger social groups infected with Mycobacterium bovis. Journal of Clinical Microbiology, 59 (1). e01226-20. doi:10.1128/JCM.01226-20

Murray, Gregory P. D., Lissenden, Natalie, Jones, Jeff, Voloshin, Vitaly, Toé, K. Hyacinthe, Sherrard-Smith, Ellie, Foster, Geraldine M., Churcher, Thomas S., Parker, Josephine E. A., Towers, Catherine E., N'Falé, Sagnon, Guelbeogo, Wamdaogo M., Ranson, Hilary, Towers, David P. and McCall, Philip J. (2019) Barrier bednets target malaria vectors and expand the range of usable insecticides. Nature Microbiology, 5 . pp. 40-47. doi:10.1038/s41564-019-0607-2

Muthumeenakshi, S., Goldstein, Alan L., Stewart, Alison and Whipps, J. M. (2001) Molecular studies on intraspecific diversity and phylogenetic position of Coniothyrium minitans. Mycological Research, Vol.10 (No.9). pp. 1065-1074. doi:10.1017/S0953756201004440

(2020) Rotavirus group : a genotype circulation patterns across Kenya before and after nationwide vaccine introduction, 2010-2018. BMC Infectious Diseases, 20 . 504. doi:10.1186/s12879-020-05230-0

(2018) Disease-associated genotypes of the commensal skin bacterium Staphylococcus epidermidis. Nature Communications, 9 (1). 5034 . doi:10.1038/s41467-018-07368-7

Möhlmann, Tim W. R., Keeling, Matthew James, Wennergren, Uno, Favia, Guido, Santman-Berends, Inge, Takken, Willem, Koenraadt, Constantianus J. M. and Brand, Samuel (2021) Biting midge dynamics and bluetongue transmission : a multiscale model linking catch data with climate and disease outbreaks. Scientific Reports, 11 (1). 1892. doi:10.1038/s41598-021-81096-9

Møller-Olsen, Christian, Ho, Siu Fung, Shukla, Ranti Dev, Feher, Tamas and Sagona, Antonia P. (2018) Engineered K1F bacteriophages kill intracellular Escherichia coli K1 in human epithelial cells. Scientific Reports, 8 . 17559. doi:10.1038/s41598-018-35859-6

Naguib, Marwa, Feldman, Nicolás, Zarodkiewicz, Paulina, Shropshire, Holly, Biamis, Christina, El-Halfawy, Omar M., McCain, Julia, Dezanet, Clément, Décout, Jean-Luc, Chen, Yin, Cosa, Gonzalo and Valvano, Miguel A. (2022) An evolutionary conserved detoxification system for membrane lipid–derived peroxyl radicals in Gram-negative bacteria. PLoS Biology, 20 (5). e3001610. doi:10.1371/journal.pbio.3001610

Napit, Indra B., Shrestha, Dilip, Bishop, Jon, Choudhury, Sopna, Dulal, Santosh, Gill, Paramjit, Gkini, Eleni, Gwyther, Holly, Hagge, Deanna A., Neupane, Karuna, Sartori, Jo, Slinn, Gemma, Watson, Samuel I. and Lilford, Richard (2021) An individual randomised efficacy trial of autologous blood products, leukocyte and platelet-rich fibrin (L-PRF), to promote ulcer healing in leprosy in Nepal : the TABLE trial protocol. Trials, 22 (1). 453. doi:10.1186/s13063-021-05392-5

Narayanan, Priya Lakshami, Raza, Shan-e-Ahmed, Hall, Allison H., Marks, Jeffrey R. , King, Lorraine , West, Robert B. , Hernandez, Lucia , Guppy, Naomi , Dowsett, Mitch , Gusterson, Barry , Maley, Carlo , Hwang, E. Shelley and Yuan, Yinyin (2021) Unmasking the immune microecology of ductal carcinoma in situ with deep learning. npj Breast Cancer , 7 . 19. doi:10.1038/s41523-020-00205-5

Nelson, A. C. (Andrew Christopher), Mould, Arne W., Bikoff, Elizabeth K. and Robertson, Elizabeth J. (2017) Mapping the chromatin landscape and Blimp1 transcriptional targets that regulate trophoblast differentiation. Scientific Reports, 7 (1). 6793. doi:10.1038/s41598-017-06859-9

Neufeld, Josh D. , Boden, Rich, Moussard, Hélène, Schäfer, Hendrik and Murrell, J. C. (J. Colin) (2008) Substrate-specific clades of active marine methylotrophs associated with a phytoplankton bloom in a temperate coastal environment. Applied and Environmental Microbiology, Vol.74 (No.23). pp. 7321-7328. doi:10.1128/AEM.01266-08

Nev, Olga and Berg, Hugo van den (2018) Holling Type I versus Holling Type II functional responses in Gram-negative bacteria. Transactions of Mathematics and Its Applications, 2 (1). pp. 1-19. doi:10.1093/imatrm/tny001

Nev, Olga and Berg, Hugo van den (2017) Mathematical models of microbial growth and metabolism : a whole-organism perspective. Science Progress, 100 (4). pp. 343-362.

Nev, Olga and Berg, Hugo van den (2018) Microbial metabolism and growth under conditions of starvation modeled as the sliding mode of a differential inclusion. Dynamical Systems, 33 (1). pp. 93-112. doi:10.1080/14689367.2017.1298726

Nev, Olga and Berg, Hugo van den (2017) Optimal management of nutrient reserves in microorganisms under time-varying environmental conditions. Journal of Theoretical Biology, 429 . pp. 124-141.

Nev, Olga and Berg, Hugo van den (2017) Variable-Internal-Stores models of microbial growth and metabolism with dynamic allocation of cellular resources. Journal of Mathematical Biology, 74 (1-2). pp. 409-445. doi:10.1007/s00285-016-1030-4

Nezis, I. P. (2012) The selectivity and specificity of autophagy in drosophila. Cells, Volume 1 (Number 3). pp. 248-262. doi:10.3390/cells1030248

Nguyen, Huy D., Tomitaka, Yasuhiro, Ho, Simon Y. W., Duchêne, Sebastián, Vetten, Heinrich-Josef, Lesemann, D.-E., Walsh, John A., Gibbs, Adrian J. and Ohshima, Kazusato (2013) Turnip mosaic potyvirus probably first spread to Eurasian brassica crops from wild orchids about 1000 years ago. PLoS One, Volume 8 (Number 2). Article no.e55336. doi:10.1371/journal.pone.0055336

Ni, Jing, Chen, Jiaqi, Liu, Shuojie, Hao, Ganglai and Geng, Xueyu (2022) Experimental study of the usage of combined biopolymer and plants in reinforcing the clayey soil exposed to acidic and alkaline contaminations. Applied Sciences, 12 (12). 5808. doi:10.3390/app12125808

Ni, Jing, Li, Shanshan, Mao, Lei and Geng, Xueyu (2020) Performance of soils enhanced with eco-friendly biopolymers in unconfined compression strength tests and fatigue loading tests. Construction and Building Materials, 263 . 120039. doi:10.1016/j.conbuildmat.2020.120039

(2010) The dynamic architecture of the metabolic switch in Streptomyces coelicolor. BMC Genomics, 11 . p. 10. doi:DOI: 10.1186/1471-2164-11-10

(2010) The dynamic architecture of the metabolic switch in Streptomyces coelicolor. BMC Genomics, Vol.11 (Article 10). doi:10.1186/1471-2164-11-10

Nijjar, Sarbjit, Maddison, Daniel, Meigh, Louise, Wolf, Elizabeth, Rodgers, Thomas, Cann, Martin J. and Dale, Nicholas (2021) Opposing modulation of Cx26 gap junctions and hemichannels by CO 2. The Journal of Physiology, 599 (1). pp. 103-118. doi:10.1113/JP280747

Nijjar, Sarbjit and Woodland, Hugh R. (2013) Localisation of RNAs into the germ plasm of vitellogenic xenopus oocytes. PLoS One, Volume 8 (Number 4). Article number e61847. doi:10.1371/journal.pone.0061847

Nitzsche, Franziska, Müller, Claudia, Lukomska, Barbara, Jolkkonen, Jukka, Deten, Alexander and Boltze, Johannes (2017) Concise review : MSC adhesion cascade-insights into homing and transendothelial migration. Stem Cells, 35 (6). pp. 1446-1460. doi:10.1002/stem.2614

Nixon, Faye M., Gutierrez-Caballero, Cristina, Hood, Fiona E., Booth, Daniel G., Prior, Ian A. and Royle, Stephen J. (2015) The mesh is a network of microtubule connectors that stabilizes individual kinetochore fibers of the mitotic spindle. eLife, 4 . pp. 1-21. 07635. doi:10.7554/eLife.07635

Noda-Garcia, Lianet, Camacho-Zarco, Aldo R., Medina-Ruíz, Sophía, Gaytán, Paul, Carrillo-Tripp, Mauricio, Fülöp, Vilmos and Barona-Gómez, Francisco (2013) Evolution of substrate specificity in a recipient's enzyme following horizontal gene transfer. Molecular Biology and Evolution, Volume 30 (Number 9). pp. 2024-2034. doi:10.1093/molbev/mst115

Nofal, Ahmed Maged, Cacciotti, Gabriella and Lee, Nick (2020) Who complies with COVID-19 transmission mitigation behavioral guidelines? PLOS ONE, 15 (10). e0240396. doi:10.1371/journal.pone.0240396

Nutsugah, S. K., Twumasi, J. K., Chipili, J., Sere, Y. and Sreenivasaprasad, S. (2008) Diversity of the Rice Blast Pathogen Populations in Ghana and Strategies for Resistance Management. Plant Pathology Journal, Vol.7 (No.1). pp. 109-113. doi:10.3923/ppj.2008.109.113

Nyaguthii, Dickson Machira, Otieno, Grieven P., Kombe, Ivy K., Koech, Dorothy, Mutunga, Martin, Medley, Graham F., Nokes, D. James and Munywoki, Patrick K. (2021) Infection patterns of endemic human coronaviruses in rural households in coastal Kenya [version 1; peer review: 1 approved, 2 approved with reservations]. Wellcome Open Research, 6 . 27. doi:10.12688/wellcomeopenres.16508.1

Ochanda, Horace, Young, A. S. and Medley, Graham (2003) Survival of Theileria parva in its nymphal tick vector Rhipicephalus appendiculatus under laboratory and quasi natural conditions. Parasitology , Vol.12 (No.6). pp. 571-576. doi:10.1017/S0031182003003147

Okal, Michael N, Lindh, Jenny M, Torr, Stephen J., Masinde, Elizabeth, Orindi, Benedict, Lindsay, Steve W and Fillinger, Ulrike (2015) Analysing the oviposition behaviour of malaria mosquitoes : design considerations for improving two-choice egg count experiments. Malaria Journal, Volume 14 (Number 1). Article number 768. doi:10.1186/s12936-015-0768-2

Oketch, John W., Everlyn, Everlyn, Otieno, James R., Mwema, Anthony, Lewa, Clement, Isoe, Everlyne, Nokes, D. James and Agoti, Charles N. (2021) Comparative analysis of spatial-temporal patterns of human metapneumovirus and respiratory syncytial virus in Africa using genetic data, 2011-2014. Virology Journal, 18 (1). 104. doi:10.1186/s12985-021-01570-8

Oketch, John W., Kamau, Everlyn, Otieno, Grieven P., Otieno, James R., Agoti, Charles N. and Nokes, D. James (2019) Human metapneumovirus prevalence and patterns of subgroup persistence identified through surveillance of pediatric pneumonia hospital admissions in coastal Kenya, 2007–2016. BMC Infectious Diseases, 19 (1). 757. doi:10.1186/s12879-019-4381-9

Olakunde, Babayemi O., Adeyinka, Daniel A., Olakunde, Olubunmi A., Uthman, Olalekan A., Bada, Florence O., Nartey, Yvonne A., Obiri-Yeboah, Dorcas, Paintsil, Elijah and Ezeanolue, Echezona E. (2021) A systematic review and meta-analysis of the prevalence of hepatitis B virus infection among pregnant women in Nigeria. PLoS One, 16 (10). e0259218. doi:10.1371/journal.pone.0259218

Olin-Sandoval, Viridiana, Yu, Jason Shu Lim, Miller-Fleming, Leonor, Alam, Mohammad T., Kamrad, Stephan, Correia-Melo, Clara, Haas, Robert, Segal, Joanna, Peña Navarro, David Alejandro, Herrera-Dominguez, Lucia, Méndez-Lucio, Oscar, Vowinckel, Jakob, Mülleder, Michael and Ralser, Markus (2019) Lysine harvesting is an antioxidant strategy and triggers underground polyamine metabolism. Nature, 572 (7768). pp. 249-253. doi:10.1038/s41586-019-1442-6

Oluwole, Abraham O., Corey, Robin A., Brown, Chelsea M., Hernández-Rocamora, Victor M., Stansfeld, Phillip J., Vollmer, Waldemar, Bolla, Jani R. and Robinson, Carol V. (2022) Peptidoglycan biosynthesis is driven by lipid transfer along enzyme-substrate affinity gradients. Nature Communications, 13 (1). 2278. doi:10.1038/s41467-022-29836-x

Omran, Farah and Christian, Mark (2020) Inflammatory signaling and brown fat activity. Frontiers in Endocrinology, 11 . doi:10.3389/fendo.2020.00156

Ornelas, Isabel, Unwin, Patrick R. and Bentley, Cameron Luke (2019) High-throughput correlative electrochemistry−microscopy at a transmission electron microscopy (TEM) grid electrode. Analytical Chemistry, 91 (23). pp. 14854-14859. doi:10.1021/acs.analchem.9b04028

Osnes, Magnus N., Didelot, Xavier, Korne-Elenbaas, Jolinda de, Alfsnes, Kristian, Brynildsrud, Ola B., Syversen, Gaute, Nilsen, Øivind Jul, De Blasio, Birgitte Freiesleben, Caugant, Dominique A. and Eldholm, Vegard (2020) Sudden emergence of a Neisseria gonorrhoeae clade with reduced susceptibility to extended-spectrum cephalosporins, Norway. Microbial Genomics, 6 (12). doi:10.1099/mgen.0.000480

(2020) Impact of the introduction of rotavirus vaccine on hospital admissions for diarrhoea among children in Kenya : a controlled interrupted time series analysis. Clinical Infectious Diseases, 70 (11). pp. 2306-2313. doi:10.1093/cid/ciz912

Otten, Lucienne, Fullam, Elizabeth and Gibson, Matthew I. (2016) Discrimination between bacterial species by ratiometric analysis of their carbohydrate binding profile. Molecular BioSystems, 12 (2). pp. 341-344. doi:10.1039/c5mb00720h

Ozer, Egon A., Nnah, Ekpeno, Didelot, Xavier, Whitaker, Rachel J. and Hauser, Alan R. (2019) The population structure of Pseudomonas aeruginosa is characterized by genetic isolation of exoU+ and exoS+ lineages. Genome Biology and Evolution, 11 (1). pp. 1780-1796. doi:10.1093/gbe/evz119

Pacheco, Catarina C., Büttel, Zsófia, Pinto, Filipe, Rodrigo, Guillermo, Carrera, Javier, Jaramillo, Alfonso and Tamagnini, Paula (2018) Modulation of intracellular O2 concentration in Escherichia coli strains using oxygen consuming devices. ACS Synthetic Biology, 7 (7). pp. 1742-1752. doi:10.1021/acssynbio.7b00428

Pacheco, Luis G. C., Slade, Susan E., Seyffert, Núbia, Santos, Anderson R., Castro, Thiago L. P., Silva, Wanderson M., Santos, Agenor V., Santos, Simone G., Farias, Luiz M., Carvalho, Maria A. R., Pimenta, Adriano M. C., Meyer, Roberto, Silva, Artur, Scrivens, James H., Oliveira, Sérgio C., Miyoshi, Anderson, Dowson, Christopher G. and Azevedo, Vasco (2011) A combined approach for comparative exoproteome analysis of Corynebacterium pseudotuberculosis. BMC Microbiology, Vol.11 . article no. 12. doi:10.1186/1471-2180-11-12

Pacheco-Gómez, Raúl, Roper, David I., Dafforn, Tim and Rodger, Alison (2011) The pH dependence of polymerization and bundling by the essential bacterial cytoskeltal protein FtsZ. PLoS One, Vol.6 (No.6). e19369. doi:10.1371/journal.pone.0019369

Page, Andrew J., Alikhan, Nabil-Fareed, Carleton, Heather A., Seemann, Torsten, Keane, Jacqueline A. and Katz, Lee S. (2017) Comparison of classical multi-locus sequence typing software for next-generation sequencing data. Microbial Genomics, 3 (8). e000124. doi:10.1099/mgen.0.000124

Pandey, Anish, Cleary, David W., Laver, Jay R., Gorringe, Andrew, Deasy, Alice M., Dale, Adam P., Morris, Paul D., Didelot, Xavier, Maiden, Martin C. J. and Read, Robert C. (2018) Microevolution of Neisseria lactamica during nasopharyngeal colonisation induced by controlled human infection. Nature Communications, 9 (1). 4753.

Panzi, Eric Kalunda, Okenge, Léon Ngongo, Kabali, Eugénie Hamuli, Tshimungu, Félicien, Dilu, Angèle Keti, Mulangu, Felix and Kandala, Ngianga-Bakwin (2022) Geo-climatic factors of Malaria morbidity in the Democratic Republic of Congo from 2001 to 2019. International Journal of Environmental Research and Public Health, 19 (7). e3811. doi:10.3390/ijerph19073811

Parag, K. V., Thompson, Robin N. and Donnelly, C. A. (2022) Are epidemic growth rates more informative than reproduction numbers? Journal of the Royal Statistical Society: Series A . doi:10.1111/rssa.12867 (In Press)

Parker, Hadyn, Tomás, Ruben M. F., Furze, Christopher M., Guy, Collette S. and Fullam, Elizabeth (2020) Asymmetric trehalose analogues to probe disaccharide processing pathways in mycobacteria. Organic & Biomolecular Chemistry (18). pp. 3607-3612. doi:10.1039/D0OB00253D

Parsons, Joanne and Atherton, Helen (2020) How effective are digital interventions in increasing flu vaccination amongst pregnant women? A systematic review protocol. Systematic Reviews, 9 (1). p. 117. doi:10.1186/s13643-020-01372-z

(2013) Carbohydrate utilization and metabolism is highly differentiated in Agaricus bisporus. BMC Genomics, Volume 14 (Number 1). Article number 663. doi:10.1186/1471-2164-14-663

Paulin, Sarah, Jamshad, Mohammed, Dafforn, Tim, Garcia-Lara, Jorge, Foster, Simon J., Galley, Nicola F., Roper, David I., Rosado, Helena and Taylor, Peter W. (2014) Surfactant-free purification of membrane protein complexes from bacteria : application to the staphylococcal penicillin-binding protein complex PBP2/PBP2a. Nanotechnology, Volume 25 (Number 28). Article number 285101. doi:10.1088/0957-4484/25/28/285101

Paulitsch-Fuchs, Astrid H., Bödendorfer, Benjamin, Wolrab, Lukas, Eck, Nicole, Dyer, Nigel P. and Lohberger, Birgit (2022) Effect of Cobalt–Chromium–Molybdenum implant surface modifications on biofilm development of S. aureus and S. epidermidis. Frontiers in Cellular and Infection Microbiology, 12 . 837124. doi:10.3389/fcimb.2022.837124

Pearce, David A., Newsham, Kevin K., Thorne, Michael A. S., Calvo-Bado, Leo A., Krsek, Martin, Laskaris, Paris, Hodson, Andrew J. and Wellington, E. M. H. (2012) Metagenomic analysis of a southern maritime Antarctic soil. Frontiers in Microbiology, Volume 3 . Article number 403. doi:10.3389/fmicb.2012.00403

Pecchia, Leandro, Piaggio, Davide, Maccaro, Alessia, Formisano, Claudio and Iadanza, Ernesto (2020) The inadequacy of regulatory frameworks in time of crisis and in low-resource settings : personal protective equipment and COVID-19. Health and Technology, 10 . pp. 1375-1383. doi:10.1007/s12553-020-00429-2

Penman, Bridget S. and Gupta, Sunetra (2018) Detecting signatures of past pathogen selection on human HLA loci : are there needles in the haystack? Parasitology , 145 (6). pp. 731-739. doi:10.1017/S0031182017001159

Penman, Bridget S., Moffett, Ashley, Chazara, Olympe, Gupta, Sunetra and Parham, Peter (2016) Reproduction, infection and killer-cell immunoglobulin-like receptor haplotype evolution. Immunogenetics, 68 (10). pp. 755-764. doi:10.1007/s00251-016-0935-9

Perez-Sepulveda, Blanca, Pitt, Frances Diana, N’Guyen, A. N., Ratin, M., Garczarek, L., Millard, Andrew D. and Scanlan, David J. (2018) Relative stability of ploidy in a marine Synechococcus across various growth conditions. Environmental Microbiology, 10 (4). pp. 428-432. doi:10.1111/1758-2229.12614

Perez-Sepulveda, Blanca, Redgwell, Tamsin, Rihtman, Branko, Pitt, Frances Diana, Scanlan, David J. , Millard, Andrew D. and Hantke, Klaus (2016) Marine phage genomics : the tip of the iceberg. FEMS Microbiology Letters, 363 (15). doi:10.1093/femsle/fnw158

Perkins, Arden, Tudorica, Dan A., Teixeira, Raphael D., Schirmer, Tilman, Zumwalt, Lindsay, Ogba, O. Maduka, Cassidy, C. Keith, Stansfeld, Phillip J., Guillemin, Karen and Cooper, Vaughn S. (2021) A bacterial inflammation sensor regulates c-di-GMP signaling, adhesion, and biofilm formation. mBio, 12 (3). e00173-21. doi:10.1128/mBio.00173-21

Petre, Benjamin, Contreras, Mauricio P., Bozkurt, Tolga O., Schattat, Martin H., Sklenar, Jan, Schornack, Sebastian, Abd-El-Haliem, Ahmed, Castells-Graells, Roger, Lozano-Durán, Rosa, Dagdas, Yasin F., Menke, Frank L. H., Jones, Alexandra M. E., Vossen, Jack H., Robatzek, Silke, Kamoun, Sophien and Win, Joe (2021) Host-interactor screens of Phytophthora infestans RXLR proteins reveal vesicle trafficking as a major effector-targeted process. The Plant Cell, 33 (5). pp. 1447-1471. doi:10.1093/PLCELL/KOAB069

Petrova, Yoana D., Zhao, Jinlian, Webster, Gordon, Mullins, Alex J., Williams, Katherine, Alswat, Amal S., Challis, Gregory L., Bailey, Andy M. and Mahenthiralingam, Eshwar (2022) Cloning and expression of Burkholderia polyyne biosynthetic gene clusters in Paraburkholderia hosts provides a strategy for biopesticide development. Microbial Biotechnology, 15 (10). pp. 2547-2561. doi:10.1111/1751-7915.14106

Phillips, Daniel J., Wilde, Marleen, Greco, Francesca and Gibson, Matthew I. (2015) Enzymatically-triggered, isothermally responsive polymers : re-programming poly(oligoethylene glycols) to respond to phosphatase. Biomacromolecules, 16 (10). pp. 3256-3264. doi:10.1021/acs.biomac.5b00929

Phillpott, Mason, Daga, Sunil, Higgins, Rob, Lowe, David Philip, Krishnan, Nithya S., Zehnder, Daniel, Briggs, David and Khovanova, N. A. (2022) Dynamic behaviour of donor specific antibodies in the early period following HLA incompatible kidney transplantation. Transplant International, 35 . 10128. doi:10.3389/ti.2022.10128

Piersma, Sjouke, Denham, Emma, Drulhe, Samuel, Tonk, Rudi H. J., Schwikowski, Benno and Dijl, Jan Maarten van (2013) TLM-Quant : an open-source pipeline for visualization and quantification of gene expression heterogeneity in growing microbial cells. PLoS One, Volume 8 (Number 7). Article number e68696. doi:10.1371/journal.pone.0068696

Piper, Jason, Assi, Salam A., Cauchy, Pierre, Ladroue, Christophe, Cockerill, Peter N., Bonifer, Constanze and Ott, Sascha (2015) Wellington-bootstrap : differential DNase-seq footprinting identifies cell-type determining transcription factors. BMC Genomics, 16 (1). pp. 1-8. doi:10.1186/s12864-015-2081-4

Pitt, Frances Diana, Millard, Andrew D., Ostrowski, Martin, Dervish, Suat, Mazard, Sophie, Paulsen, Ian T., Zubkov, Mikhail V. and Scanlan, David J. (2016) A sample-to-sequence protocol for genus targeted transcriptomic profiling : application to marine Synechococcus. Frontiers in Microbiology, 7 . 1592. doi:10.3389/fmicb.2016.01592

Pittera, Justine, Jouhet, Juliette, Breton, Solène, Garczarek, Laurence, Partensky, Frédéric, Maréchal, Éric, Nguyen, Ngoc A., Doré, Hugo, Ratin, Morgane, Pitt, Frances Diana, Scanlan, David J. and Six, Christophe (2017) Thermoacclimation and genome adaptation of the membrane lipidome in marine Synechococcus. Environmental Microbiology, 20 (2). pp. 612-631. doi:10.1111/1462-2920.13985

Ploeg, R. van der, Monteferrante, Carmine G., Piersma, Sjouke, Barnett, James P., Kouwen, Thijs R. H. M., Robinson, Colin and van Dijl, J. M. (2012) High-salinity growth conditions promote tat-independent secretion of tat substrates in Bacillus subtilis. Applied and Environmental Microbiology, Vol.78 (No.21). pp. 7733-7744. doi:10.1128/AEM.02093-12

Ploss, Tina N., Reilman, Ewoud, Monteferrante, Carmine G., Denham, Emma, Piersma, Sjouke, Lingner, Anja, Vehmaanperä, Jari, Lorenz, Patrick and van Dijl, Jan Maarten (2016) Homogeneity and heterogeneity in amylase production by Bacillus subtilis under different growth conditions. Microbial Cell Factories, 15 (1). doi:10.1186/s12934-016-0455-1

Plummer, Martyn, de Martel, Catherine, Vignat, Jerome, Ferlay, J., Bray, Freddie and Franceschi, Silvia (2016) Global burden of cancers attributable to infections in 2012 : a synthetic analysis. The Lancet Global Health, 4 (9). e609-e616. doi:10.1016/S2214-109X(16)30143-7

Podtelezhnikov, Alexei A. and Wild, David L. (2008) CRANKITE: a fast polypeptide backbone conformation sampler. Source Code for Biology and Medicine, Vol. 3 (No. 12). doi:10.1186/1751-0473-3-12

(2018) Mutations in SELENBP1, encoding a novel human methanethiol oxidase, cause extraoral halitosis. Nature Genetics, 50 (1). pp. 120-129. doi:10.1038/s41588-017-0006-7

Pontiroli, Alessandra, Khera, Tanya T., Oakley, Brian B., Mason, Sam, Dowd, Scot E., Travis, Emma Rachel, Erenso, Girum, Aseffa, Abraham, Courtenay, Orin and Wellington, E. M. H. (2013) Prospecting environmental mycobacteria: combined molecular approaches reveal unprecedented diversity. PLoS One, Volume 8 (Number 7). Article number e68648. doi:10.1371/journal.pone.0068648

Pontiroli, Alessandra, Travis, Emma Rachel, Sweeney, F. P., Porter, David, Gaze, William H., Mason, Sam, Hibberd, V., Holden, Jennifer, Courtenay, Orin and Wellington, E. M. H. (2011) Pathogen quantitation in complex matrices : a multi-operator comparison of DNA extraction methods with a novel assessment of PCR inhibition. PLoS One, Vol.6 (No.3). Article number e17916. doi:10.1371/journal.pone.0017916

Popat, Roman, Harrison, Freya, da Silva, Ana C., Easton, Scott A. S., McNally, Luke, Williams, Paul and Diggle, Stephen P. (2017) Environmental modification via a quorum sensing molecule influences the social landscape of siderophore production. Proceedings of the Royal Society B: Biological Sciences, 284 (1852). 20170200. doi:10.1098/rspb.2017.0200

Pratt, Hillary G., Steinberger, Kayla J., Mihalik, Nicole E., Ott, Sascha, Whalley, Thomas, Szomolay, Barbara, Boone, Brian A. and Eubank, Timothy D. (2021) Macrophage and neutrophil interactions in the pancreatic tumor microenvironment drive the pathogenesis of pancreatic cancer. Cancers, 14 (1). e194. doi:10.3390/cancers14010194

Prindle, Arthur, Liu, Jintao, Asally, Munehiro, Ly, San, Garcia-Ojalvo, Jordi and Süel, Gürol M. (2015) Ion channels enable electrical communication in bacterial communities. Nature, 527 . pp. 59-63. doi:10.1038/nature15709

Prosser, Naomi S., Hill, Edward M., Armstrong, Derek, Gow, Lorna, Tildesley, Michael J., Keeling, Matt J., Kaler, Jasmeet, Ferguson, Eamonn and Green, Martin J. (2022) Descriptive analysis of national bovine viral diarrhoea test data in England. Veterinary Record, 191 (5). e1854. doi:10.1002/vetr.1854

Punekar, Avinash S., Samsudin, Firdaus, Lloyd, Adrian J., Dowson, Christopher G., Scott, David J., Khalid, Syma and Roper, David I. (2018) The role of the jaw subdomain of peptidoglycan glycosyltransferases for lipid II polymerization. The Cell Surface, 2 . pp. 54-66. doi:10.1016/j.tcsw.2018.06.002

Puxty, Richard J., Millard, Andrew D., Evans, David J. and Scanlan, David J. (2016) Viruses inhibit CO2 fixation in the most abundant phototrophs on earth. Current Biology, 26 (12). pp. 1585-1589. doi:10.1016/j.cub.2016.04.036

Puxty, Richard John, Evans, David J., Millard, Andrew D. and Scanlan, David J. (2018) Energy limitation of cyanophage development : implications for marine carbon cycling. ISME Journal, 12 . 1273-1286 . doi:10.1038/s41396-017-0043-3

Puxty, Richard John, Perez-Sepulveda, Blanca, Rihtman, Branko, Evans, David J., Millard, Andrew D. and Scanlan, David J. (2015) Spontaneous deletion of an “ORFanage” region facilitates host adaptation in a “photosynthetic” cyanophage. PLoS One, Volume 10 (Number 7). pp. 1-13. Article number e0132642. doi:10.1371/journal.pone.0132642

Pye, Valerie E., Rosa, Annachiara, Bertelli, Cinzia, Struwe, Weston B., Maslen, Sarah L., Corey, Robin A., Liko, Idlir, Hassall, Mark, Mattiuzzo, Giada, Ballandras-Colas, Allison, Nans, Andrea, Takeuchi, Yasuhiro, Stansfeld, Phillip J., Skehel, J. Mark, Robinson, Carol V., Pizzato, Massimo and Cherepanov, Peter (2020) A bipartite structural organization defines the SERINC family of HIV-1 restriction factors. Nature Structural & Molecular Biology, 27 . pp. 78-83. doi:10.1038/s41594-019-0357-0

Pym, Edward C.G., Southall, Tony D., Mee, Christopher J., Brand, Andrea H. and Baines, Richard A. (2006) The homeobox transcription factor Even-skipped regulates acquisition of electrical properties in Drosophila neurons. Neural Development, Vol.1 (No.3). doi:10.1186/1749-8104-1-3

Qin, Cheng, Li, Bin, Fan, Yaya, Zhang, Xian, Yu, Zhiming, Ryabov, Eugene, Zhao, Mei, Wang, Hui, Shi, Nongnong, Zhang, Pengcheng, Jackson, Stephen D. , Tör, Mahmut, Cheng, Qi, Liu, Yule, Gallusci, Philippe and Hong, Yiguo (2017) Roles of dicer-like proteins 2 and 4 in intra- and intercellular antiviral silencing. Plant Physiology, 174 (2). pp. 1067-1081. doi:10.1104/pp.17.00475

Qin, Qi-Long, Wang, Zhi-Bin, Su, Hai-Nan, Chen, Xiu-Lan, Miao, Jie, Wang, Xiu-Juan, Li, Chun-Yang, Zhang, Xi-Ying, Li, Ping-Yi, Wang, Min, Fang, Jiasong, Lidbury, Ian, Zhang, Weipeng, Zhang, Xiao-Hua, Yang, Gui-Peng, Chen, Yin and Zhang, Yu-Zhong (2021) Oxidation of trimethylamine to trimethylamine N-oxide facilitates high hydrostatic pressure tolerance in a generalist bacterial lineage. Science Advances, 7 (13). eabf9941. doi:10.1126/sciadv.abf9941

Quareshy, Mussa, Shanmugam, Muralidharan, Townsend, Eleanor, Jameson, Eleanor, Bugg, Timothy D. H., Cameron, Alexander and Chen, Yin (2021) Structural basis of carnitine monooxygenase CntA substrate specificity, inhibition and inter-subunit electron transfer. Journal of Biological Chemistry, 296 . 100038. doi:10.1074/jbc.RA120.016019

Quick, Joshua, Cumley, Nicola, Wearn, Christopher M., Niebel, Marc, Constantinidou, Chrystala, Thomas, Christopher M., Pallen, Mark J., Moiemen, Naiem S., Bamford, Amy, Oppenheim, Beryl and Loman, Nicholas J. (2014) Seeking the source of Pseudomonas aeruginosa infections in a recently opened hospital : an observational study using whole-genome sequencing. BMJ Open, Volume 4 (Number 11). Article number e006278. doi:10.1136/bmjopen-2014-006278

Quick, Joshua , Constantinidou, Chrystala, Pallen, Mark J., Oppenheim, Beryl and Loman, Nicholas J. (2014) Draft genome sequence of Elizabethkingia meningoseptica isolated from a traumatic wound. Genome Announcements, Volume 2 (Number 3). Article number e00355-14. doi:10.1128/genomeA.00355-14

Quince, Christopher , Nurk, Sergey, Raguideau, Sébastien, James, Robert, Soyer, Orkun S., Summers, J. Kimberly, Limasset, Antoine, Eren, A. Murat, Chikhi, Rayan and Darling, Aaron E. (2021) STRONG : metagenomics strain resolution on assembly graphs. Genome Biology, 22 (1). 214. doi:10.1186/s13059-021-02419-7

Quinn, Angus, Bottery, Michael J., Thompson, Harry and Friman, Ville-Petri (2022) Resistance evolution can disrupt antibiotic exposure protection through competitive exclusion of the protective species. The ISME Journal, 16 . 2433-2447 . doi:10.1038/s41396-022-01285-w

Rahmanpour, Rahman and Bugg, Tim (2013) Assembly in vitro of rhodococcus jostii RHA1 encapsulin and peroxidase DypB to form a nano-compartment. FEBS Journal, Volume 280 (Issue 9). pp. 2097-2104. doi:10.1111/febs.12234

Rangama, Severine, Lidbury, Ian, Holden, Jennifer, Borsetto, Chiara, Murphy, Andrew, Hawkey, Peter and Wellington, E. M. H. (2021) Mechanisms involved in the active secretion of CTX-M-15 β-lactamase by pathogenic Escherichia coli ST131. Antimicrobial Agents and Chemotherapy, 65 (10). e0066321. doi:10.1128/AAC.00663-21

Rangel-Pineros, Guillermo, Millard, Andrew D., Michniewski, Slawomir, Scanlan, David J. , Sirén, Kimmo, Reyes, Alejandro, Petersen, Bent, Clokie, Martha R. J. and Sicheritz-Pontén, Thomas (2021) From trees to clouds : PhageClouds for fast comparison of ∼640,000 phage genomic sequences and host-centric visualization using genomic network graphs. PHAGE : Therapy, Applications, and Research, 2 (4). pp. 194-203. doi:10.1089/phage.2021.0008

Rao, Shanlin, Bates, George T., Matthews, Callum R., Newport, Thomas D., Vickery, Owen N. and Stansfeld, Phillip J. (2020) Characterising membrane association and periplasmic transfer of bacterial lipoproteins through molecular dynamics simulations. Structure, 28 (4). pp. 475-487. doi:10.1016/j.str.2020.01.012

Ratheesh, Aparna, Belyaeva, Vera and Siekhaus, Daria E (2015) Drosophila immune cell migration and adhesion during embryonic development and larval immune responses. Current Opinion in Cell Biology, 36 . pp. 71-79. doi:10.1016/j.ceb.2015.07.003

Rakai Health Sciences Program, Pangea HIV Consortium (Including:

). (2020) Quantifying HIV transmission flow between high-prevalence hotspots and surrounding communities : a population-based study in Rakai, Uganda. The Lancet HIV, 7 (3). e173-e183. doi:10.1016/S2352-3018(19)30378-9

Ray, Swagat and Anderson, Emma C. (2016) Stimulation of translation by human Unr requires cold shock domains 2 and 4, and correlates with poly(A) binding protein interaction. Scientific Reports, 6 . 22461. doi:10.1038/srep22461

Rea, Dean, Van Elzen, Roos, De Winter, Hans, Van Goethem, Sebastiaan, Landuyt, Bart, Luyten, Walter, Schoofs, Liliane, Van Der Veken, Pieter, Augustyns, Koen, De Meester, Ingrid, Fülöp, Vilmos and Lambeir, Anne-Marie (2017) Crystal structure of Porphyromonas gingivalis dipeptidyl peptidase 4 and structure-activity relationships based on inhibitor profiling. European Journal of Medicinal Chemistry, 139 . pp. 482-491. doi:10.1016/j.ejmech.2017.08.024

Rego, Ryan, Watson, Samuel I., Alam, Mohammad Atique Ul, Abdullah, Syed Asif, Yunus, Mohammad, Alam, Imam Taskin, Chowdhury, A.S.M.Homuan Kabir, Haider, S.M.Arefeen, Faruque, ASG, Khan, Azharul Islam, Hofer, Timothy, Gill, Paramjit, Islam, Mohammad Sirajul and Lilford, Richard (2021) A comparison of traditional diarrhoea measurement methods with microbiological and biochemical indicators : a cross-sectional observational study in the Cox's Bazar displaced persons camp. eClinicalMedicine, 42 . 101205. doi:10.1016/j.eclinm.2021.101205

Reilman, E., Mars, R. A. T., van Dijl, J. M. and Denham, Emma (2014) The multidrug ABC transporter BmrC/BmrD of Bacillus subtilis is regulated via a ribosome-mediated transcriptional attenuation mechanism. Nucleic Acids Research, 42 (18). pp. 11393-11407. doi:10.1093/nar/gku832

Remenyi, Judit, van den Bosch, Mirjam W. M., Palygin, Oleg, Mistry, Rajen B., McKenzie, Colin, Macdonald, Andrew, Hutvagner, Gyorgy, Arthur, J. Simon C., Frenguelli, Bruno G. and Pankratov, Yuriy (2013) miR-132/212 knockout mice reveal roles for these miRNAs in regulating cortical synaptic transmission and plasticity. PLoS One, Volume 8 (Number 4). Article number e62509. doi:10.1371/journal.pone.0062509

Rich-Griffin, Charlotte, Stechemesser, Annika, Finch, Jessica A., Lucas, Emma S., Ott, Sascha and Schäfer, Patrick (2019) Single-cell transcriptomics : a high-resolution avenue for plant functional genomics. Trends in Plant Science . doi:10.1016/j.tplants.2019.10.008

Richa, Kumari, Balestra, Cecilia, Piredda, Roberta, Benes, Vladimir, Borra, Marco, Passarelli, Augusto, Margiotta, Francesca, Saggiomo, Maria, Biffali, Elio, Sanges, Remo, Scanlan, David J. and Casotti, Raffaella (2017) Distribution, community composition and potential metabolic activity of bacterioplankton in an urbanized Mediterranean Sea coastal zone. Applied and Environmental Microbiology, 83 (17). e00494-17. doi:10.1128/AEM.00494-17

Richards, Adair D. and Rodger, Alison (2007) Synthetic metallomolecules as agents for the control of DNA structure. Chemical Society Reviews, 36 (No.3). pp. 471-483. doi:10.1039/b609495c

Richards, Sarah-Jane, Baker, Alexander, Walker, Marc and Gibson, Matthew I. (2020) Polymer-stabilized sialylated nanoparticles : synthesis, optimization, and differential binding to influenza hemagglutinins. Biomacromolecules, 21 (4). pp. 1604-1612. doi:10.1021/acs.biomac.0c00179

Riddell, Carolyn E., Lobaton Garces, Juan D., Adams, Sally, Barribeau, Seth M., Twell, David and Mallon, Eamonn B. (2014) Differential gene expression and alternative splicing in insect immune specificity. BMC Genomics, Volume 15 (Number 1). Article number 1031. doi:10.1186/1471-2164-15-1031

Rihtman, Branko, Meaden, Sean, Clokie, Martha R. J., Koskella, Britt and Millard, Andrew D. (2016) Assessing Illumina technology for the high-throughput sequencing of bacteriophage genomes. PeerJ, 4 . pp. 1-21. e2055. doi:10.7717/peerj.2055

Rihtman, Branko, Puxty, Richard John, Hapeshi, Alexia, Lee, Yan-Jiun, Zhan, Yuanchao, Michniewski, Slawomir, Waterfield, Nicholas R., Chen, Feng, Weigele, Peter, Millard, Andrew D., Scanlan, David J. and Chen, Yin (2021) A new family of globally distributed lytic roseophages with unusual deoxythymidine to deoxyuridine substitution. Current Biology, 31 (14). 3199-3206.e4. doi:10.1016/j.cub.2021.05.014

Robb, Nicole C. (2022) Virus morphology : insights from super-resolution fluorescence microscopy. Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease, 1868 (4). 166347. doi:10.1016/j.bbadis.2022.166347

Robb, Nicole C., Taylor, Jonathan M., Kent, Amy, Pambos, Oliver J., Gilboa, Barak, Evangelidou, Maria, Mentis, Alexios-Fotios A. and Kapanidis, Achillefs N. (2019) Rapid functionalisation and detection of viruses via a novel Ca2+-mediated virus-DNA interaction. Scientific Reports, 9 (1). 16219. doi:10.1038/s41598-019-52759-5

Robb, Nicole C., te Velthuis, Aartjan J. W., Fodor, Ervin and Kapanidis, Achillefs N. (2019) Real-time analysis of single influenza virus replication complexes reveals large promoter-dependent differences in initiation dynamics. Nucleic Acids Research, 47 (12). pp. 6466-6477. doi:10.1093/nar/gkz313

Robb, Nicole C., te Velthuis, Aartjan J. W., Wieneke, Ralph, Tampé, Robert, Cordes, Thorben, Fodor, Ervin and Kapanidis, Achillefs N. (2016) Single-molecule FRET reveals the pre-initiation and initiation conformations of influenza virus promoter RNA. Nucleic Acids Research, 44 (21). pp. 10304-10315. doi:10.1093/nar/gkw884

Robinson, Esther R., Juhas, Mario, Hood, Derek W. and Crook, Derrick (2010) Construction of a novel shuttle vector for use in Haemophilus influenzae and H. parainfluenzae. Journal of Microbiological Methods, 83 (3). pp. 330-334. doi:10.1016/j.mimet.2010.09.010

Robotham, Julie, Jenkins, D. R. and Medley, Graham (2006) Screening strategies in surveillance and control of methicillin-resistant Staphylococcus aureus (MRSA). Epidemiology and Infection, Vol.135 (No.2). pp. 328-342. doi:10.1017/S095026880600687X

(2015) The global threat of antimicrobial resistance : science for intervention. New Microbes and New Infections, 6 . pp. 22-29. doi:10.1016/j.nmni.2015.02.007

Rock, Kat S., Brand, Samuel, Moir, Jo and Keeling, Matthew James (2014) Dynamics of infectious diseases. Reports on Progress in Physics, Volume 77 (Number 2). Article number 026602. doi:10.1088/0034-4885/77/2/026602

Rodriguez-Manzano, Jesus, Moser, Nicolas, Malpartida-Cardenas, Kenny, Moniri, Ahmad, Fisarova, Lenka, Pennisi, Ivana, Boonyasiri, Adhiratha, Jauneikaite, Elita, Abdolrasouli, Alireza, Otter, Jonathan A., Bolt, Frances, Davies, Frances, Didelot, Xavier, Holmes, Alison and Georgiou, Pantelis (2020) Rapid detection of mobilized colistin resistance using a nucleic acid based lab-on-a-chip diagnostic system. Scientific Reports, 10 (1). 8448 . doi:10.1038/s41598-020-64612-1

Rodwell, Ella V., Chan, Yung-Wai, Sawyer, Clare, Carroll, Anne, McNamara, Eleanor, Allison, Lesley, Browning, Lynda, Holmes, Anne, Godbole, Gauri, McCarthy, Noel D. and Jenkins, Claire (2022) Shiga toxin-producing Escherichia coli clonal complex 32, including serotype O145:H28, in the UK and Ireland. Journal of Medical Microbiology, 71 (8). doi:10.1099/jmm.0.001579

Rodwell, Ella V., Vishram, Bhavita, Smith, Robert, Browning, Lynda, Smith-Palmer, Alison, Allison, Lesley, Holmes, Anne, Godbole, Gauri, McCarthy, Noel D., Dallman, Timothy J. and Jenkins, Claire (2021) Epidemiology and genomic analysis of Shiga toxin-producing Escherichia coli clonal complex 165 in the UK. Journal of Medical Microbiology, 70 (12). 001471. doi:10.1099/jmm.0.001471

Roemer, Rudolf A., Roemer, Navodya S. and Wallis, A. Katrine (2021) Flexibility and mobility of SARS-CoV-2-related protein structures. Scientific Reports, 11 . 4257 . doi:10.1038/s41598-021-82849-2

Rohn, Jennifer L., Mostowy, Serge, King, Jason S., Unnikrishnan, Meera and Gutierrez, Maximiliano G. (2019) The UK cellular microbiology network : exploring the host‐bacterial interface. Cellular Microbiology, 21 (9). e13081. doi:10.1111/cmi.13081

Ronan, Jade L., Kadi, Nadia, McMahon, Stephen A., Naismith, James H., Alkhalaf, Lona M. and Challis, Gregory L. (2018) Desferrioxamine biosynthesis : diverse hydroxamate assembly by substrate-tolerant acyl transferase DesC. Philosophical Transactions of the Royal Society B: Biological Sciences, 373 (1748). doi:10.1098/rstb.2017.0068

Roy, Proyash, Achom, Mingkee, Wilkinson, Helen, Lagunas, Beatriz and Gifford, Miriam L. (2020) Symbiotic outcome modified by the diversification from 7 to over 700 nodule specific cysteine rich peptides. Genes, 11 (4). 348. doi:10.3390/genes11040348

Ruane, Karen M., Lloyd, Adrian J., Fülöp, Vilmos, Dowson, Christopher G., Barreteau, Hélène, Boniface, Audrey, Dementin, Sébastien, Blanot, Didier, Mengin-Lecreulx, Dominique, Gobec, Stanislav, Dessen, Andréa and Roper, David I. (2013) Specificity determinants for lysine incorporation in staphylococcus aureus peptidoglycan as revealed by the structure of a MurE enzyme ternary complex. Journal of Biological Chemistry, Volume 288 (Number 46). Article number 33439. doi:10.1074/jbc.M113.508135

Ruparell, Avika, Dubern, Jean Frederic, Ortori, Cartherine A, Harrison, Freya, Halliday, Nigel M., Emtage, Abigail, Ashawesh, Mahmoud, Laughton, Charles A., Diggle, Stephen P., Williams, P., Barrett, D. A. (David A.) and Hardie, Kim Rachael (2016) The fitness burden imposed by synthesising quorum sensing signals. Scientific Reports, 6 . pp. 1-10. 33101. doi:10.1038/srep33101

Sachak-Patwa, Rahil, Byrne, Helen M. and Thompson, Robin N. (2021) Accounting for cross-immunity can improve forecast accuracy during influenza epidemics. Epidemics, 34 . 100432. doi:10.1016/j.epidem.2020.100432

Sagar, Nidhi M., Duboc, Henri, Kay, Gemma L., Alam, Mohammad T., Wicaksono, Alfian, Covington, James A., Quince, Christopher , Kokkorou, Margarita, Svolos, Vaios, Palmieri, Lola J., Gerasimidis, Konstantinos, Walters, Julian R. F. and Arasaradnam, Ramesh P. (2020) The pathophysiology of bile acid diarrhoea : differences in the colonic microbiome, metabolome and bile acids. Scientific Reports, 10 (1). 20436. doi:10.1038/s41598-020-77374-7

Sagona, Antonia P., Grigonyte, Aurelija M., MacDonald, Paul and Jaramillo, Alfonso (2016) Genetically modified bacteriophages. Integrative Biology, 8 . pp. 465-474. doi:10.1039/c5ib00267b

Salathia, Neeraj , Davis, Seth J., Lynn, James R. , Michaels, Scott D., Amasino, Richard M. and Millar, A. J. (Andrew J.) (2006) FLOWERING LOCUS C -dependent and -independent regulation of the circadian clock by the autonomous and vernalization pathways. BMC Plant Biology, Vol.6 (No.10). doi:10.1186/1471-2229-6-10

Salathé, Marcel and Soyer, Orkun S. (2008) Parasites lead to evolution of robustness against gene loss in host signaling networks. Molecular Systems Biology, Volume 4 . Article no. 202. doi:10.1038/msb.2008.44

Sand, Charles, Njunge, James, Mwongeli, Joyce, Mutunga, Martin, Chege, Timothy, Gicheru, Elijah, Gardiner, Elizabeth, Gwela, Agnes, Drysdale, Simon, Green, Christopher, Berkley, James, Nokes, D. James and Pollard, Andrew J. (2019) Airway response to respiratory syncytial virus has incidental antibacterial effects. Nature Communications, 10 (1). 2218. doi:10.1038/s41467-019-10222-z

Sandu, Pamela, Crepin, Valerie F., Drechsler, Hauke, McAinsh, Andrew D., Frankel, Gad and Berger, Cedric N. (2017) The Enterohemorrhagic Escherichia coli effector EspW triggers actin remodeling in a Rac1-dependent manner. Infection and Immunity, 85 (9). e00244-17. doi:10.1128/IAI.00244-17

Sanghera, Narinder and Pinheiro, Teresa J. T. (2000) Unfolding and refolding of cytochrome c driven by the interaction with lipid micelles. Protein Science, Vol.9 (No.6). pp. 1194-1202. doi:10.1110/ps.9.6.1194

Sarkar, Sourav, Dalgaard, Jacob Z., Millar, Jonathan B. A. and Arumugam, Prakash (2014) The rim15-Endosulfine-PP2ACdc55 signalling module regulates entry into gametogenesis and quiescence via distinct mechanisms in budding yeast. PLoS Genetics, Volume 10 (Number 6). Article number e1004456. doi:10.1371/journal.pgen.1004456

Saunders, Nigel J., Boonmee, Prawit , Peden, John F. and Jarvis, Stephen A. (2005) Inter-species horizontal transfer resulting in core-genome and niche-adaptive variation within Helicobacter pylori. BMC Genomics, Vol.6 (No.9). doi:10.1186/1471-2164-6-9

Sayyid, Faiz and Kalvala, Sara (2016) On the importance of modelling the internal spatial dynamics of biological cells. Biosystems, 145 . pp. 53-66. doi:10.1016/j.biosystems.2016.05.012

Schleker, Sylvia, Kshirsagar, Meghana and Klein-Seetharaman, Judith (2015) Comparing human–Salmonella with plant–Salmonella protein–protein interaction predictions. Frontiers in Microbiology, 6 . 45. doi:10.3389/fmicb.2015.00045

Schwall, Christian P., Loman, Torkel E, Martins, Bruno M. C., Cortijo, Sandra, Villava, Casandra, Kusmartsev, Vassili, Livesey, Toby, Saez, Teresa and Locke, James C. W. (2021) Tunable phenotypic variability through an autoregulatory alternative sigma factor circuit. Molecular Systems Biology, 17 (7). e9832. doi:10.15252/msb.20209832

Schäfer, Hendrik, Myronova, Natalia and Boden, Rich (2010) Microbial degradation of dimethylsulphide and related C1-sulphur compounds: organisms and pathways controlling fluxes of sulphur in the biosphere. Journal of Experimental Botany, Vol.61 (No.2). pp. 315-334. doi:10.1093/jxb/erp355

Sclep, Gert, Allemeersch, Joke, Liechti, Robin, De Meyer, Björn, Beynon, Jim, Bhalerao, Rishikesh P., Moreau, Yves, Nietfeld, Wilfried, Renou, Jean-Pierre, Reymond, Philippe, Kuiper, Martin T.R. and Hilson, Pierre (2007) CATMA, a comprehensive genome-scale resource for silencing and transcript profiling of Arabidopsis genes. BMC Bioinformatics, Vol.8 (No.400). doi:10.1186/1471-2105-8-400

Sebastián, Marta, Smith, Alastair F., González, José M., Fredricks, Helen F., Van Mooy, Benjamin, Koblížek, Michal, Brandsma, Joost, Koster, Grielof, Mestre, Mireia, Mostajir, Behzad, Pitta, Paraskevi, Postle, Anthony D., Sánchez, Pablo, Gasol, Josep M., Scanlan, David J. and Chen, Yin (2016) Lipid remodelling is a widespread strategy in marine heterotrophic bacteria upon phosphorus deficiency. The ISME Journal, 10 (4). pp. 968-978. doi:10.1038/ismej.2015.172

Selama, Okba, Amos, Gregory C. A., Djenane, Zahia, Borsetto, Chiara, Laidi, Rabah Forar, Porter, David, Nateche, Farida, Wellington, E. M. H. and Hacène, Hocine (2014) Screening for genes coding for putative antitumor compounds, antimicrobial and enzymatic activities from haloalkalitolerant and haloalkaliphilic bacteria strains of Algerian Sahara soils. BioMed Research International, 2014 . Article number 317524. doi:10.1155/2014/317524

Senghore, Madikay, Chaguza, Chrispin, Bojang, Ebrima, Tientcheu, Peggy-Estelle, Bancroft, Rowan E., Lo, Stephanie W., Gladstone, Rebecca A., McGee, Lesley, Worwui, Archibald, Foster-Nyarko, Ebenezer, Ceesay, Fatima, Okoi, Catherine Bi, Klugman, Keith P., Breiman, Robert F., Bentley, Stephen D., Adegbola, Richard, Antonio, Martin, Hanage, William P. and Kwambana-Adams, Brenda A. (2022) Widespread sharing of pneumococcal strains in a rural African setting : proximate villages are more likely to share similar strains that are carried at multiple timepoints. Microbial Genomics, 8 (2). doi:10.1099/mgen.0.000732

Sens, Pierre and Turner, Matthew S. (2004) Theoretical model for the formation of caveolae and similar membrane invaginations. Biophysical Journal, Vol.86 (No.4). pp. 2049-2057. doi:10.1016/S0006-3495(04)74266-6

Sergaki, Chrysi, Lagunas, Beatriz, Lidbury, Ian, Gifford, Miriam L. and Schäfer, Patrick (2018) Challenges and approaches in microbiome research : from fundamental to applied. Frontiers in Plant Science, 9 . 1205. doi:10.3389/fpls.2018.01205

Sergeant, Martin J., Constantinidou, Chrystala, Cogan, Tristan A., Bedford, Michael R., Penn, Charles W. and Pallen, Mark J. (2014) Extensive microbial and functional diversity within the chicken cecal microbiome. PLoS ONE , Volume 9 (Number 3). Article number e91941. doi:10.1371/journal.pone.0091941

Severn, C. E., Eissa, Ahmed M., Langford, C. R., Parker, A., Walker, Marc, Dobbe, J. G. G., Streekstra, G .J., Cameron, Neil R. and Toye, A. M. (2019) Ex vivo culture of adult CD34+ stem cells using functional highly porous polymer scaffolds to establish biomimicry of the bone marrow niche. Biomaterials, 225 . 119533. doi:10.1016/j.biomaterials.2019.119533

Shah, Kunal M., Webber, Jason, Dr., Carzaniga, Raffaella, Taylor, Deborah M., Fusi, Luca, Clayton, Aled, Brosens, Jan J., Hartshorne, Geraldine M. and Christian, Mark (2013) Induction of microRNA resistance and secretion in differentiating human endometrial stromal cells. Journal of Molecular Cell Biology, Volume 5 (Number 1). pp. 67-70. doi:10.1093/jmcb/mjs058

Shahram, Masoud, Nicholas, Robin, Miles, Roger (Roger J.), Wood, Ann P. and Kelly, Donovan P. (2009) Kinetics of substrate oxidation and hydrogen peroxide production by Mycoplasma mycoides subsp. mycoides Large Colony (LC) type and Mycoplasma mycoides subsp. capri. Research in Veterinary Science, Vol.87 (No.3). pp. 364-366. doi:10.1016/j.rvsc.2009.04.012

Shahram, Masoud, Nicholas, Robin, Wood, Ann P. and Kelly, Donovan P. (2009) Further evidence to justify reassignment of Mycoplasma mycoides subspecies mycoides Large Colony type to Mycoplasma mycoides subspecies capri. Systematic and Applied Microbiology, 33 (1). pp. 20-24. doi:10.1016/j.syapm.2009.10.003

Shen, Shensi, Rodrigo, Guillermo, Prakash, Satya, Majer, Eszter, Landrain, Thomas E., Kiro, Boris, Daros, Jose-Antonio and Jaramillo, Alfonso (2015) Dynamic signal processing by ribozyme-mediated RNA circuits to control gene expression. Nucleic Acids Research, 43 (10). pp. 5158-5170. doi:10.1093/nar/gkv287

Sheridan, Paul O., Raguideau, Sébastien, Quince, Christopher, Holden, Jennifer, Thames Consortium, , Zhang, Lihong, Gubry-Rangin, Cécile and Williams, Tom A. (2020) Gene duplication drives genome expansion in a major lineage of Thaumarchaeota. Nature Communications, 11 (1). 5494. doi:10.1038/s41467-020-19132-x

Sherrard-Smith, Ellie, Churcher, Thomas S., Upton, Leanna M., Sala, Katarzyna A., Zakutansky, Sara E., Slater, Hannah C., Blagborough, Andrew M. and Betancourt, Michael (2017) A novel model fitted to multiple life stages of malaria for assessing efficacy of transmission-blocking interventions. Malaria Journal, 16 (1). 137. doi:10.1186/s12936-017-1782-3

Shi, Wei, Zhao, Hui-Yu, Chen, Yin, Wang, Jin-Song, Han, Bing, Li, Cong-Ping, Lu, Jun-Yuan and Zhang, Li-Mei (2021) Organic manure rather than phosphorus fertilization primarily determined asymbiotic nitrogen fixation rate and the stability of diazotrophic community in an upland red soil. Agriculture, Ecosystems & Environment, 319 . 107535. doi:10.1016/j.agee.2021.107535

Shi, Yanbo, Harvey, Ian, Campopiano, Dominic and Sadler, P. J. (2010) Niobium uptake and release by bacterial ferric ion binding protein. Bioinorganic Chemistry and Applications . doi:10.1155/2010/307578

Shih, P -Y., Lee, J. S., Shinya, R., Kanzaki, N., Pires-da Silva, André Francisco, Badroos, J. M., Goetz, E., Sapir, A. and Sternberg, P. W. (2019) Newly identified nematodes from Mono Lake exhibit extreme arsenic resistance. Current Biology, 29 (19). 3339-3344.E4. doi:10.1016/j.cub.2019.08.024

Sierocinski, Pawel, Bayer, Florian, Yvon-Durocher, Gabriel, Burdon, Melia, Großkopf, Tobias, Alston, Mark, Swarbreck, David, Hobbs, Phil J., Soyer, Orkun S. and Buckling, Angus (2018) Biodiversity-function relationships in methanogenic communities. Molecular Ecology, 27 (22). pp. 4641-4651. doi:10.1111/mec.14895

Sierocinski, Pawel, Milferstedt, Kim, Bayer, Florian, Großkopf, Tobias, Alston, Mark, Bastkowski, Sarah, Swarbreck, David, Hobbs, Phil J., Soyer, Orkun S., Hamelin, Jérôme and Buckling, Angus (2017) A single community dominates structure and function of a mixture of multiple methanogenic communities. Current Biology, 27 (21). 3390-3395.e4. doi:10.1016/j.cub.2017.09.056

Silberberg, Jakob M., Stock, Charlott, Hielkema, Lisa, Corey, Robin A., Rheinberger, Jan, Wunnicke, Dorith, Dubach, Victor R. A., Stansfeld, Phillip J., Hänelt, Inga and Paulino, Cristina (2022) Inhibited KdpFABC transitions into an E1 off-cycle state. eLife, 11 . doi:10.7554/elife.80988

(2009) Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens. Genome Biology (Online), Vol.10 (No.5). R51. doi:10.1186/gb-2009-10-5-r51

Simcox, Lee J., Pereira, Rui P. A., Wellington, E. M. H. and Macpherson, Julie V. (2019) Boron doped diamond as a low biofouling material in aquatic environments : assessment of pseudomonas aeruginosa biofilm formation. ACS Applied Materials and Interfaces, 11 . 28. doi:10.1021/acsami.9b07245

Simpson, Daniel H., Hapeshi, Alexia, Rogers, Nicola J., Brabec, Viktor, Clarkson, Guy J., Fox, David J., Hrabina, Ondrej, Kay, Gemma L., King, Andrew, Malina, Jaroslav, Millard, Andrew D., Moat, John, Roper, David I., Song, Hualong, Waterfield, Nicholas R. and Scott, Peter (2019) Metallohelices that kill Gram-negative pathogens using intracellular antimicrobial peptide pathways. Chemical Science, 10 . 9708-9720. doi:10.1039/C9SC03532J

Sinclair, Lucas, Ijaz, Umer Z., Jensen, Lars Juhl, Coolen, Marco J.L., Gubry-Rangin, Cecile, Chroňáková, Alica, Oulas, Anastasis, Pavloudi, Christina, Schnetzer, Julia, Weimann, Aaron, Ijaz, Ali, Eiler, Alexander, Quince, Christopher and Pafilis, Evangelos (2016) Seqenv : linking sequences to environments through text mining. PeerJ, 4 . e2690. doi:10.7717/peerj.2690

Singh, Shivani S., Typas, Athanasios, Hengge, Regine and Grainger, David C. (2011) Escherichia coli σ70 senses sequence and conformation of the promoter spacer region. Nucleic Acids Research, Vol.39 (No.12). pp. 5109-5118. doi:10.1093/nar/gkr080

(2021) Carbohydrates from Pseudomonas aeruginosa biofilms interact with immune C-type lectins and interfere with their receptor function. npj Biofilms and Microbiomes, 7 (1). 87. doi:10.1038/s41522-021-00257-w

Sirec, Teja, Benarroch, Jonatan M., Buffard, Pauline, Garcia-Ojalvo, Jordi and Asally, Munehiro (2019) Electrical polarization enables integrative quality control during bacterial differentiation into spores. iScience, 16 . pp. 378-389. doi:10.1016/j.isci.2019.05.044

Siriwardena, Ajith K., Jegatheeswaran, Santhalingam, Mason, James, Baltatzis, Minas, Chan, Anthony, Sheen, Aali J., O’Reilly, Derek, Jamdar, Saurabh, Deshpande, Rahul, de Liguori Carino, Nicola, Satyadas, Thomas, Qamruddin, Ahmed, Hayden, Katharine, Parker, Michael J., Butler, John, Rajai, Azita and McIntyre, Ben (2019) PROCalcitonin-based algorithm for antibiotic use in Acute Pancreatitis (PROCAP) : study protocol for a randomised controlled trial. Trials, 20 (1). 463. doi:10.1186/s13063-019-3549-3

Six, Christophe, Thomas, Jean-Claude , Garczarek, Laurence, Ostrowski, Martin, Dufresne, Alexis, Blot, Nicolas, Scanlan, David J. and Partensky, Frédéric (2007) Diversity and evolution of phycobilisomes in marine Synechococcus spp.: a comparative genomics study. Genome Biology, Vol.8 (No.12). doi:10.1186/gb-2007-8-12-r259

Slater, Ross T., Frost, Lucy R., Jossi, Sian E, Millard, Andrew D. and Unnikrishnan, Meera (2019) Clostridioides difficile LuxS mediates inter-bacterial interactions within biofilms. Scientific Reports, 9 (1). 9903. doi:10.1038/s41598-019-46143-6

Smith, Alastair, Rihtman, Branko, Stirrup, Rachel, Silvano, Eleonora, Mausz, Michaela A., Scanlan, David J. and Chen, Yin (2019) Elucidation of glutamine lipid biosynthesis in marine bacteria reveals its importance under phosphorus deplete growth in Rhodobacteraceae. The ISME Journal, 13 . pp. 39-49. doi:10.1038/s41396-018-0249-z

Smith, Alastair F., Silvano, Eleonora, Päuker, Orsola, Guillonneau , Richard, Quareshy, Mussa, Murphy, Andrew, Mausz, Michaela A., Stirrup, Rachel, Rihtman, Branko, Aguilo Ferretjans, Maria, Brandsma, Joost, Petersen, Jörn, Scanlan, David J. and Chen, Yin (2021) A novel class of sulfur-containing aminolipids widespread in marine roseobacters. ISME Journal, 15 . pp. 2440-2453. doi:10.1038/s41396-021-00933-x

Smith, Benjamin, Hill, Claire, Godfrey, Emma L., Rand, D. A., Berg, Hugo van den, Thornton, Steven, Hodgkin, Matthew N., Davey, John and Ladds, Graham (2009) Dual positive and negative regulation of GPCR signaling by GTP hydrolysis. Cellular Signalling, Vol.21 (No.7). pp. 1151-1160. doi:10.1016/j.cellsig.2009.03.004

Smith, Daniel C. , Sillence, Daniel J., Falguières, Thomas, Jarvis, Rosemary M., Johannes, Ludger, Lord, Mike, Platt, Frances M. and Roberts, L. M. (Lynne M.) (2006) The association of shiga-like toxin with detergent-resistant membranes is modulated by glucosylceramide and is an essential requirement in the endoplasmic reticulum for a cytotoxic effect. Molecular Biology of the Cell, Vol.17 (No.3). pp. 1375-1387. doi:10.1091/mbc.E05-11-1035

Smith, Edward M., Monaghan, E. M. (Emma M.), Huntley, Selene J. and Green, Laura E. (2011) Short communication : preliminary investigation into the effect of freezing and a cryopreservant on the recovery of mastitis pathogens from ewe milk. Journal of Dairy Science, Vol.94 (No.10). pp. 4850-4855. doi:10.3168/jds.2010-4076

Smith, Nichola A., Zhang, Pingyu, Greenough, Simon E., Horbury, Michael D., Clarkson, Guy J., McFeely, Daniel, Habtemariam, Abraha, Salassa, Luca, Stavros, Vasilios G., Dowson, Christopher G. and Sadler, P. J. (2016) Combatting AMR : photoactivatable ruthenium(ii)-isoniazid complex exhibits rapid selective antimycobacterial activity. Chemical Science, 8 (1). pp. 395-404. doi:10.1039/C6SC03028A

Smith, Sarah Marie, Walker, Kelly L., Jones, Alexander S., Smith, Corinne J. and Robinson, Colin (2019) Characterisation of a novel method for the production of single‐span membrane proteins in Escherichia coli. Biotechnology and Bioengineering, 116 (4). pp. 722-733. doi:10.1002/bit.26895

Smith, Sarah Marie, Yarwood, Andrew, Fleck, Roland A., Robinson, Colin and Smith, Corinne J. (2017) TatA complexes exhibit a marked change in organisation in response to expression of the TatBC complex. Biochemical Journal, 474 (9). pp. 1495-1508. doi:10.1042/BCJ20160952

Song, Lijiang, Jenner, Matthew, Masschelein, Joleen, Jones, Cerith, Bull, Matthew J., Harris, Simon R., Hartkoorn, Ruben C., Vocat, Anthony, Romero-Canelón, Isolda, Coupland, Paul, Webster, Gordon, Dunn, Matthew, Weiser, Rebecca, Paisey, Christopher, Cole, Stewart T., Parkhill, Julian, Mahenthiralingam, Eshwar and Challis, Gregory L. (2017) Discovery and biosynthesis of Gladiolin : a Burkholderia gladioli antibiotic with promising activity against Mycobacterium tuberculosis. Journal of the American Chemical Society, 139 (23). pp. 7974-7981. doi:10.1021/jacs.7b03382

Southwell, Rebecca V., Hilton, Sally L., Pearson, Jonathan M., Hand, Laurence H. and Bending, G. D. (2020) Inclusion of seasonal variation in river system microbial communities and phototroph activity increases environmental relevance of laboratory chemical persistence tests. Science of The Total Environment, 733 . 139070. doi:10.1016/j.scitotenv.2020.139070

Spence, Edward M., Scott, Heather T., Dumond, Louison, Calvo-Bado, Leo A., Monaco, Sabrina di, Williamson, James J., Persinoti, Gabriela F., Squina, Fabio M. and Bugg, Timothy D. H. (2020) The hydroxyquinol degradation pathway in Rhodococcus jostii RHA1 and Agrobacterium species is an alternative pathway for degradation of protocatechuic acid and lignin fragments. Applied and Environmental Microbiology, 86 (19). e01561--20. doi:10.1128/AEM.01561-20

Spensley, Katrina J., Wikramaratna, Paul S., Penman, Bridget S., Walker, Andrew, Smith, Adrian L., Pybus, Oliver G., Jean, Létitia , Gupta, Sunetra and Lourenço, José (2019) Reverse immunodynamics : a new method for identifying targets of protective immunity. Scientific Reports, 9 . 2164 . doi:10.1038/s41598-018-37288-x

Spooner, Robert A. and Lord, Mike (2015) Ricin trafficking in cells. Toxins, Volume 7 (Number 1). pp. 49-65. doi:10.3390/toxins7010049

Staniforth, Michael and Stavros, Vasilios G. (2013) Recent advances in experimental techniques to probe fast excited-state dynamics in biological molecules in the gas phase : dynamics in nucleotides, amino acids and beyond. Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences, Volume 469 (Number 2159). Article number 20130458. doi:10.1098/rspa.2013.0458

Stefanini, Irene (2018) Yeast-insect associations : it takes guts. Yeast, 35 (4). pp. 315-330. doi:10.1002/yea.3309

Stefanini, Irene, Carlin, Silvia, Tocci, Noemi, Albanese, Davide, Donati, Claudio, Franceschi, Pietro, Paris, Michele, Zenato, Alberto, Tempesta, Silvano, Bronzato, Alberto, Vrhovsek, Urska, Mattivi, Fulvio and Cavalieri, Duccio (2017) Core microbiota and metabolome of vitis vinifera L. cv. corvina grapes and musts. Frontiers in Microbiology, 8 . 457. doi:10.3389/fmicb.2017.00457

Stefanini, Irene and Cavalieri, Duccio (2018) Metagenomic approaches to investigate the contribution of the vineyard environment to the quality of wine fermentation : potentials and difficulties. Frontiers in Microbiology, 9 . 991. doi:10.3389/fmicb.2018.00991

Stirk, Emily R., Lythe, Grant, Berg, Hugo van den and Molina-Paris, Carmen (2010) Stochastic competitive exclusion in the maintenance of the naïve T cell repertoire. Journal of Theoretical Biology, Vol.265 (No.3). pp. 396-410. doi:10.1016/j.jtbi.2010.05.004

Stroh, Albrecht, Kressel, Jenny, Coras, Roland, Dreyer, Antje Y., Fröhlich, Wenke, Lobsien, Donald, Blümcke, Ingmar, Zoubaa, Saida, Schlegel , Jürgen, Zimmer, Claus, Boltze, Johannes and Förschler, Annette (2019) A safe and effective magnetic labeling protocol for MRI-based tracking of human adult neural stem cells. Frontiers in Neuroscience, 13 . 1092. doi:10.3389/fnins.2019.01092

Styles, Kathryn, Brown, Aidan and Sagona, Antonia P. (2021) A review of using mathematical modelling to improve our understanding of bacteriophage, bacteria and eukaryotic interactions. Frontiers in Microbiology, 12 . 724767. doi:10.3389/fmicb.2021.724767

Styles, Kathryn, Thummeepak, Rapee, Leungtongkam, Udomluk, Smith, Sophie, Christie, Gabrielle S., Millard, Andrew D., Moat, John, Dowson, Christopher G., Wellington, Elizabeth M. H., Sitthisak, Sutthirat and Sagona, Antonia P. (2020) Investigating bacteriophages targeting the opportunistic pathogen Acinetobacter baumannii. Antibiotics, 9 (4). 200. doi:10.3390/antibiotics9040200

Sudhakar, Padhmanand, Claire-Jacomin, Anne, Hautefort, Isabelle, Samavedam, Siva, Fatemian, Koorosh, Ari, Eszter, Gul, Leila, Demeter, Amanda, Jones, Emily, Korcsmaros, Tamas and Nezis, Ioannis P. (2019) Targeted interplay between bacterial pathogens and host autophagy. Autophagy, 15 (9). pp. 1620-1633. doi:10.1080/15548627.2019.1590519

Sun, Jing, Mausz, Michaela A., Chen, Yin and Giovannoni, Stephen J. (2019) Microbial trimethylamine metabolism in marine environments. Environmental Microbiology, 21 (2). pp. 513-520. doi:10.1111/1462-2920.14461

Sweeney, Esther, Sabnis, Akshay, Edwards, Andrew M. and Harrison, Freya (2020) Effect of host-mimicking medium and biofilm growth on the ability of colistin to kill Pseudomonas aeruginosa. Microbiology, 166 (12). pp. 1171-1180. doi:10.1099/mic.0.000995

Sweeney, F. P., Courtenay, Orin, Hibberd, V., Hewinson, R. G., Reilly, L. A., Gaze, William H. and Wellington, E. M. H. (2007) Environmental monitoring of Mycobacterium bovis in badger feces and badger sett soil by real-time PCR, as confirmed by immunofluorescence, immunocapture, and cultivation. Applied and Environmental Microbiology, Vol.73 (No.22). pp. 7471-7473. doi:10.1128/AEM.00978-07

Szomolay, Barbara, Williams, Tamsin, Wooldridge, Linda and Berg, Hugo van den (2013) Co-receptor CD8-mediated modulation of T-cell receptor functional sensitivity and epitope recognition degeneracy. Frontiers in Immunology, Volume 4 . p. 329. doi:10.3389/fimmu.2013.00329

Sánchez-Romero, María Antonia, Busby, S. (Stephen), Dyer, Nigel, Ott, Sascha, Millard, Andrew D. and Grainger, David C. (2010) Dynamic distribution of SeqA protein across the chromosome of Escherichia coli K-12. mBio, Vol.1 (No.1). Article number e00012-10. doi:10.1128/mBio.00012-10

Tamas, Ivica, Dedysh, Svetlana N., Liesack, Werner, Stott, Matthew B., Alam, Maqsudul, Murrell, J. C. (J. Colin) and Dunfield, Peter F. (2010) Complete genome sequence of Beijerinckia indica subsp indica. Journal of Bacteriology, Vol.192 (No.17). pp. 4532-4533. doi:10.1128/JB.00656-10

Tamizi, Amin-Asyraf, Mat-Amin, Noriha, Weaver, Jack, Olumakaiye, Richard T., Akbar, Muhamad Afiq, Jin, Sophie, Bunawan, Hamidun and Alberti, Fabrizio (2022) Genome sequencing and analysis of Trichoderma (Hypocreaceae) isolates exhibiting antagonistic activity against the papaya dieback pathogen, Erwinia mallotivora. Journal of Fungi, 8 (3). 246. doi:10.3390/jof8030246

Tanaka, Joji, Gleinich, Anne S., Zhang, Qiang, Whitfield, Richard, Kempe, Kristian, Haddleton, David M., Davis, Thomas P., Perrier, Sébastien, Mitchell, Daniel A. and Wilson, Paul (2017) Specific and differential binding of N-acetylgalactosamine glycopolymers to the human macrophage galactose lectin and asialoglycoprotein receptor. Biomacromolecules, 18 (5). pp. 1624-1633. doi:10.1021/acs.biomac.7b00228

Tarabra, Elena, An Lee, Ting-Wen, Zammit, Victor A., Vatish, Manu, Yamada, Eijiro, Pessin, Jeffrey E. and Bastie, Claire C. (2017) Differential activation of Fyn kinase distinguishes saturated and unsaturated fats in mouse macrophages. Oncotarget . doi:10.18632/oncotarget.21258

Tascón, Igor, Sousa, Joana S., Corey, Robin A., Mills, Deryck J., Griwatz, David, Aumüller, Nadine, Mikusevic, Vedrana, Stansfeld, Phillip J., Vonck, Janet and Hänelt, Inga (2020) Structural basis of proton-coupled potassium transport in the KUP family. Nature Communications, 11 (1). 626. doi:10.1038/s41467-020-14441-7

Taubert, Martin, Grob, Carolina, Howat, Alexandra M., Burns, Oliver J., Dixon, Joanna L., Chen, Yin and Murrell, J. C. (J. Colin) (2015) XoxFencoding an alternative methanol dehydrogenase is widespread in coastal marine environments. Environmental Microbiology, 17 (10). pp. 3937-3948. doi:10.1111/1462-2920.12896

Taylor, Andrew, Armitage, Andrew D., Handy, Claire, Jackson, Alison C., Hulin, Michelle T., Harrison, Richard J. and Clarkson, John P. (2019) Basal rot of narcissus : understanding pathogenicity in fusarium oxysporum f. sp. narcissi. Frontiers in Microbiology, 10 . 2905. doi:10.3389/fmicb.2019.02905

Taylor, Andrew, Vágány, Viktória, Jackson, Alison C., Harrison, Richard J., Rainoni, Alessandro and Clarkson, John P. (2016) Identification of pathogenicity-related genes in Fusarium oxysporum f. sp. cepae. Molecular Plant Pathology, 17 (7). pp. 1032-1047. doi:10.1111/mpp.12346

Teng, Zhao-Jie, Qin, Qi-Long, Zhang, Weipeng, Li, Jian, Fu, Hui-Hui, Wang, Peng, Lan, Musheng, Luo, Guangfu, He, Jianfeng, McMinn, Andrew, Wang, Min, Chen, Xiu-Lan, Zhang, Yu-Zhong, Chen, Yin and Li, Chun-Yang (2021) Biogeographic traits of dimethyl sulfide and dimethylsulfoniopropionate cycling in polar oceans. Microbiome, 9 (1). 207. doi:10.1186/s40168-021-01153-3

Teng, Zhao-Jie, Wang, Peng, Chen, Xiu-Lan, Guillonneau, Richard, Li, Chun-Yang, Zou, Song-Bao, Gong, Jun , Xu, Kai-Wen, Han, Lin, Wang, Chao, Scanlan, David J. , Chen, Yin and Zhang, Yu-Zhong (2021) Acrylate protects a marine bacterium from grazing by a ciliate predator. Nature microbiology, 6 (11). pp. 1351-1356. doi:10.1038/s41564-021-00981-1

Tennant, Warren, Tildesley, Michael J., Spencer, Simon E. F. and Keeling, Matthew James (2020) Climate drivers of plague epidemiology in British India, 1898–1949. Proceedings of the Royal Society B: Biological Sciences, 287 (1928). 20200538. doi:10.1098/rspb.2020.0538

Ternent, Lucy, Mayoh, Daniel, Lees, Martin R. and Davies, Gemma L. (2016) Heparin-stabilised iron oxide for MR applications : a relaxometric study. Journal of Materials Chemistry B, 4 . pp. 3065-3074. doi:10.1039/c6tb00832a

Thanapipatsiri, Anyarat, Gomez-Escribano, Juan Pablo, Song, Lijiang, Bibb, Maureen J., Al-Bassam, Mahmoud, Chandra, Govind, Thamchaipenet, Arinthip, Challis, Gregory L. and Bibb, Mervyn J. (2016) Discovery of unusual biaryl polyketides by activation of a silent streptomyces venezuelae biosynthetic gene cluster. Chembiochem, 17 (22). pp. 2189-2198. doi:10.1002/cbic.201600396

Thanwisai, Aunchalee, Tandhavanant, Sarunporn, Saiprom, Natnaree, Waterfield, Nicholas R., Ke Long, Phan, Bode, Helge B., Peacock, Sharon J. and Chantratita, Narisara (2012) Diversity of Xenorhabdus and Photorhabdus spp. and their symbiotic entomopathogenic nematodes from Thailand. PLoS One, Volume 7 (Number 9). Article number e43835. doi:10.1371/journal.pone.0043835

(2020) Detection of neutralising antibodies to SARS-CoV-2 to determine population exposure in Scottish blood donors between March and May 2020. Eurosurveillance, 25 (42). 2000685. doi:10.2807/1560-7917.es.2020.25.42.2000685

Thompson, Robin N., Hill, Edward M. and Gog, Julia R. (2021) SARS-CoV-2 incidence and vaccine escape. The Lancet Infectious Diseases, 21 (7). pp. 913-914. doi:10.1016/S1473-3099(21)00202-4

(2006) The complete genome sequence and comparative genome analysis of the high pathogenicity Yersinia enterocolitica strain 8081. PLOS Genetics, Vol.2 (No.12). pp. 2039-2051. doi:10.1371/journal.pgen.0020206

Timofeeva, Yulia and Volynsk, Kirill E. (2015) Calmodulin as a major calcium buffer shaping vesicular release and short-term synaptic plasticity : facilitation through buffer dislocation. Frontiers in Cellular Neuroscience, 9 . pp. 1-13. 239. doi:10.3389/fncel.2015.00239

Tock, Andrew J. , Fourie, Deidré, Walley, Peter G., Holub, E. B., Soler, Alvaro, Cichy, Karen A., Pastor-Corrales, Marcial A., Song, Qijian, Porch, Timothy G., Hart, John P., Vasconcellos, Renato C. C., Vicente, Joana G., Barker, Guy C. and Miklas, Phillip N. (2017) Genome-wide linkage and association mapping of halo blight resistance in common bean to Race 6 of the globally important bacterial pathogen. Frontiers in Plant Science, 8 . doi:10.3389/fpls.2017.01170

Tohidifar, Payman , Bodhankar,, Girija , Pei, Sichong, Cassidy, C. Keith, Walukiewicz, Hanna , Orodal, George , Stansfeld, Phillip J. and Rao, Christopher (2020) The unconventional cytoplasmic sensing mechanism for ethanol chemotaxis in Bacillus subtilis. mBio, 11 . e02177-20. doi:10.1128/mBio.02177-20

Tomás, Ruben M. F. and Gibson, Matthew I. (2021) Covalent cell surface recruitment of chemotherapeutic polymers enhances selectivity and activity. Chemical Science, 12 (12). pp. 4557-4569. doi:10.1039/D0SC06580C

Tomás, Ruben M. F. and Gibson, Matthew I. (2019) Optimization and stability of cell–polymer hybrids obtained by “clicking” synthetic polymers to metabolically labeled cell surface glycans. Biomacromolecules, 20 (7). pp. 2726-2736. doi:10.1021/acs.biomac.9b00478

Torondel, Belen, Ensink, Jeroen H.J., Gundogdu, Ozan, Ijaz, Umer Zeeshan, Parkhill, Julian, Abdelahi, Faraji, Nguyen, Viet-Anh, Sudgen, Steven, Gibson, Walter, Walker, Alan W. and Quince, Christopher (2016) Assessment of the influence of intrinsic environmental and geographical factors on the bacterial ecology of pit latrines. Microbial Biotechnology, 9 (2). pp. 209-223. doi:10.1111/1751-7915.12334

Townsend, Eleanor, Kelly, Lucy, Gannon, Lucy, Muscatt, George, Dunstan, Rhys, Michniewski, Slawomir, Sapkota, Hari, Kiljunen, Saija J., Kolsi, Anna, Skurnik, Mikael, Lithgow, Trevor, Millard, Andrew D. and Jameson, Eleanor (2021) Isolation and chacterisation of Klebsiella phages for phage therapy. PHAGE Therapy, Applications, and Research, 2 (1). pp. 26-42. doi:10.1089/phage.2020.0046

Townsend, Eleanor, Kelly, Lucy, Muscatt, George, Box, Joshua D., Hargraves, Nicole, Lilley, Daniel and Jameson, Eleanor (2021) The human gut phageome : origins and roles in the human gut microbiome. Frontiers in Cellular and Infection Microbiology, 11 . 643214. doi:10.3389/fcimb.2021.643214

Townsend, Eleanor, Moat, John and Jameson, Eleanor (2020) CAUTI’s next top model : model dependent Klebsiella biofilm inhibition by bacteriophages and antimicrobials. Biofilm, 2 . 100038. doi:10.1016/j.bioflm.2020.100038

Tran, Anh T., Watson, Emma E., Pujari, Venugopal, Conroy, Trent, Dowman, Luke J., Giltrap, Andrew M., Pang, Angel, Wong, Weng-Ruh, Linington, Roger G., Saunders, Jessica, Charman, Susan A., West, Nicholas P., Bugg, Tim, Tod, Julie, Dowson, Christopher G., Roper, David I., Crick, Dean C., Britton, Warwick J. and Payne, Richard J. (2017) Sansanmycin natural product analogues as potent and selective anti-mycobacterials that inhibit lipid I biosynthesis. Nature Communications, 8 . 14414 . doi:10.1038/ncomms14414

Travis, Emma Rachel, Gaze, William H., Pontiroli, Alessandra, Sweeney, Francis P., Porter, David, Mason, Sam, Keeling, Matthew James, Jones, Rebecca M., Sawyer, Jason, Aranaz, Alicia, Castellanos Rizaldos, Elena, Cork, Jennifer, Delahay, Richard J., Wilson, Gavin J., Hewinson, R. Glyn, Courtenay, Orin and Wellington, E. M. H. (2011) An inter-laboratory validation of a real time PCR assay to measure host excretion of bacterial pathogens, particularly of mycobacterium bovis. PLoS One, Vol.6 (No.11). e27369. doi:10.1371/journal.pone.0027369

Tsitsekian, Dikran, Daras, Gerasimos, Karamanou, Konstantina, Templalexis, Dimitris, Koudounas, Konstantinos, Malliarakis, Dimitris, Koufakis, Theologos, Chatzopoulos, Dimitris, Goumas, Dimitris, Ntoukakis, Vardis, Hatzopoulos, Polydefkis and Rigas, Stamatis (2021) Clavibacter michiganensis downregulates photosynthesis and modifies monolignols metabolism revealing a crosstalk with tomato immune responses. International Journal of Molecular Sciences, 22 (16). e8442. doi:10.3390/ijms22168442

Tsompanidou, Eleni, Denham, Emma, Sibbald, Mark J. J. B., Yang, Xiao-mei, Seinen, Jolien, Friedrich, Alexander W., Buist, Girbe and Dijl, Jan Maarten van (2012) The sortase A substrates FnbpA, FnbpB, ClfA and ClfB antagonize colony spreading of staphylococcus aureus. PLoS One, Volume 7 (Number 9). Article number e44646. doi:10.1371/journal.pone.0044646

Tsypik, Olga, Makitrynskyy, Roman, Bera, Agnieszka, Song, Lijiang, Wohlleben, Wolfgang, Fedorenko, Victor and Ostash, Bohdan (2017) Role of GntR family regulatory gene SCO1678 in gluconate metabolism in streptomyces coelicolor M145. BioMed Research International, 2017 . pp. 1-9. 9529501. doi:10.1155/2017/9529501

Tupiņa, Dagnija, Krah, Alexander, Marzinek, Jan K., Zuzic, Lorena, Moverley, Adam A., Constantinidou, Chrystala and Bond, Peter J. (2022) Bridging the N-terminal and middle domains in FliG of the flagellar rotor. Current Research in Structural Biology, 4 . pp. 59-67. doi:10.1016/j.crstbi.2022.02.002

Tyson, Richard A. (Richard Anthony), Zatulovskiy, Evgeny, Kay, Robert R. and Bretschneider, Till (2014) How blebs and pseudopods cooperate during chemotaxis. Proceedings of the National Academy of Sciences of the United States of America, 111 (32). pp. 11703-11708. doi:10.1073/pnas.1322291111

Unnikrishnan, Meera, Constantinidou, Chrystala, Palmer, Tracy and Pallen, Mark J. (2017) The enigmatic Esx proteins : looking beyond mycobacteria. Trends in Microbiology, 25 (3). pp. 192-204. doi:10.1016/j.tim.2016.11.004

Usha, Veeraraghavan, Lloyd, Adrian J., Roper, David I., Dowson, Christopher G., Kozlov, Guennadi, Gehring, Kalle, Chauhan, Smita, Imam, Hasan T., Blindauer, Claudia A. and Besra, Gurdyal S. (2016) Reconstruction of diaminopimelic acid biosynthesis allows characterisation of Mycobacterium tuberculosis N-succinyl-L,L-diaminopimelic acid desuccinylase. Scientific Reports, 6 . 23191. doi:10.1038/srep23191

Uytterhoeven, Birgit, Appermans, Kenny, Song, Lijiang, Masschelein, Joleen, Lathouwers, Thomas , Michiels, Chris W. and Lavigne, Rob (2016) Systematic analysis of the kalimantacin assembly line NRPS module using an adapted targeted mutagenesis approach. Microbiology Open, 5 (2). pp. 279-286. doi:10.1002/mbo3.326

Vajs, Jure, Proud, Conor, Brozovic, Anamaria, Gazvoda, Martin, Lloyd, Adrian J., Roper, David I., Osmak, Maja, Košmrlj, Janez and Dowson, Christopher G. (2017) Diaryltriazenes as antibacterial agents against methicillin resistant Staphylococcus aureus (MRSA) and Mycobacterium smegmatis. European Journal of Medicinal Chemistry, 127 . pp. 223-234. doi:10.1016/j.ejmech.2016.12.060

Valand, Nisha, Brunt, Emily, Gazioglu, Ozcan, Yesilkaya, Hasan, Mitchell, Daniel A., Horley, Neill, Arroo, Randolph, Kishore, Uday, Wallis, Russell and Venkatraman Girija, Umakhanth (2022) Inactivation of the complement lectin pathway by Candida tropicalis secreted aspartyl protease-1. Immunobiology, 227 (6). 152263. doi:10.1016/j.imbio.2022.152263

Valappil, Sabeel P., Abou Neel, Ensanya A., Pickup, David M., Burden, Emily, Sahdev, Rohan, Miles, Emma J., Cooper, Lee, Ansari, Tahera I., Hanna, John V. and Higham, Susan M. (2022) Antibacterial, remineralising and matrix metalloproteinase inhibiting scandium-doped phosphate glasses for treatment of dental caries. Dental Materials, 38 (1). pp. 94-107. doi:10.1016/j.dental.2021.10.014

Valappil, Valappil, Pickup, D. M., Carroll, Donna L., Hope, Chris K., Pratten, Jonathan, Newport, Robert J., Smith, Mark E., Wilson, Michael and Knowles, Jonathan C. (2007) Effect of silver content on the structure and antibacterial activity of silver-doped phosphate-based glasses. Antimicrobial Agents and Chemotherapy, Vol.51 (No.12). pp. 4453-4461. doi:10.1128/AAC.00605-07

Valoskova, Katarina, Biebl, Julia, Roblek, Marko, Emtenani, Shamsi, Gyoergy, Attila, Misova, Michaela, Ratheesh, Aparna, Reis-Rodrigues, Patricia, Shkarina, Kateryna, Larsen, Ida Signe Bohse, Vakhrushev, Sergey Y., Clausen, Henrik and Siekhaus, Daria E. (2019) A conserved major facilitator superfamily member orchestrates a subset of O-glycosylation to aid macrophage tissue invasion. eLife, 8 . e41801. doi:10.7554/eLife.41801.001

Vance, Keith W., Woodcock, Dan J., Reid, John E., Bretschneider, Till, Ott, Sascha and Koentges, Georgy (2015) Conserved cis-regulatory modules control robustness in Msx1 expression at single-cell resolution. Genome Biology and Evolution, 7 (9). pp. 2762-2778. doi:10.1093/gbe/evv179

Vavoulis, Dimitris V., Nikitin, Eugeny S., Feng, Jianfeng, Benjamin, Paul R. and Kemenes, György (2007) Computational model of a modulatory cell type in the feeding network of the snail, Lymnaea stagnalis. BMC Neuroscience, Volume 8 (Supplement 2). p. 113. doi:10.1186/1471-2202-8-S2-P113

Vegvari, Carolin, Grad, Yonatan H., White, Peter J., Didelot, Xavier, Whittles, Lilith K., Scangarella-Oman, Nicole E., Mitrani-Gold, Fanny S., Dumont, Etienne, Perry, Caroline R., Gilchrist, Kim, Hossain, Mohammad, Mortimer, Tatum D., Anderson, Roy M. and Gardiner, David (2020) Using rapid point-of-care tests to inform antibiotic choice to mitigate drug resistance in gonorrhoea. Eurosurveillance, 25 (43). doi:10.2807/1560-7917.ES.2020.25.43.1900210

Vicente, Joana G., Rothwell, Steve, Holub, E. B. and Studholme, David J. (2017) Pathogenic, phenotypic and molecular characterisation of Xanthomonas nasturtii sp. nov. and Xanthomonas floridensis sp. nov., new species of Xanthomonas associated with watercress production in Florida. International Journal of Systematic and Evolutionary Microbiology, 67 (9). pp. 3645-3654. doi:10.1099/ijsem.0.002189

Vidal, A. B., Colles, F. M., Rodgers, J. D., McCarthy, Noel D., Davies, R. H., Maiden, M. C. J. and Clifton-Hadley, F. A. (2016) Genetic diversity of Campylobacter jejuni and Campylobacter coli isolates from conventional broiler flocks and the impacts of sampling strategy and laboratory method. Applied and Environmental Microbiology, 82 (8). pp. 2347-2355. doi:10.1128/AEM.03693-15

Viguetti, S. Z., Pacheco, L. G. C., Santos, L. S., Soares, S. C., Bolt, F., Baldwin, Adam, Dowson, Christopher G., Rosso, M. L., Guiso, N., Miyoshi, A., Hirata, R., Mattos-Guaraldi, A. L. and Azevedo, V. (2012) Multilocus sequence types of invasive Corynebacterium diphtheriae isolated in the Rio de Janeiro urban area, Brazil. Epidemiology and Infection, Volume 140 (Number 4). pp. 617-620. doi:10.1017/S0950268811000963

Vind, Kristiina, Maffioli, Sonia, Fernandez Ciruelos, Blanca, Waschulin, Valentin, Brunati, Cristina, Simone, Matteo, Sosio, Margherita and Donadio, Stefano (2022) N-acetyl-cysteinylated streptophenazines from Streptomyces. Journal of Natural Products, 85 (5). pp. 1239-1247. doi:10.1021/acs.jnatprod.1c01123

Vinner, Gurinder K., Richards, Kerry, Leppanen, Miika, Sagona, Antonia P. and Malik, Danish J. (2019) Microencapsulation of enteric bacteriophages in a pH-responsive solid oral dosage formulation using a scalable membrane emulsification process. Pharmaceutics, 11 (9). 475. doi:10.3390/pharmaceutics11090475

Vladimirou, Elina, Harry, Edward, Burroughs, Nigel John and McAinsh, Andrew D. (2011) Springs, clutches and motors : driving forward kinetochore mechanism by modelling. Chromosome Research, Volume 19 (Number 3). pp. 409-421. doi:10.1007/s10577-011-9191-x

Vlisidou, Isabella, Hapeshi, Alexia, Healey, Joseph R. J., Smart, Katie, Yang, Guowei and Waterfield, Nicholas R. (2019) The PVC element of Photorhabdus asymbiotica virulence cassettes deliver protein effectors directly into target eukaryotic cells. eLife, 8 . e46259.. doi:10.7554/eLife.46259

Vogeley, L., El Arnaout, T., Bailey, J., Stansfeld, Phillip J., Boland, C. and Caffrey, M. (2016) Structural basis of lipoprotein signal peptidase II action and inhibition by the antibiotic globomycin. Science, 351 (6275). pp. 876-880. doi:10.1126/science.aad3747

Vogler, Amy J., Chan, Fabien, Wagner, David M., Roumagnac, Philippe, Lee, Judy, Nera, Roxanne, Eppinger, Mark, Ravel, Jacques, Rahalison, Lila, Rasoamanana, Bruno W., Beckstrom-Sternberg, Stephen M., Achtman, Mark, Chanteau, Suzanne and Keim, Paul (2011) Phylogeography and molecular epidemiology of Yersinia pestis in Madagascar. PLoS Neglected Tropical Diseases, Volume 5 (Number 9). Article number e1319. doi:10.1371/journal.pntd.0001319

Voliotis, Margaritis, Rosko, Jerko, Pilizota, Teuta and Liverpool, Tanniemola B. (2022) Steady state running rate sets the speed and accuracy of accumulation of swimming bacteria. Biophysical Journal . doi:10.1016/j.bpj.2022.08.012

Voß, Björn, Bolhuis, Henk, Fewer, David P., Kopf, Matthias, Möke, Fred, Haas, Fabian, El-Shehawy, Rehab, Hayes, Paul, Bergman, Birgitta, Sivonen, Kaarina, Dittmann, Elke, Scanlan, David J., Hagemann, Martin, Stal, Lucas J. and Hess, Wolfgang R. (2013) Insights into the physiology and ecology of the brackish-water-adapted cyanobacterium nodularia spumigena CCY9414 based on a genome-transcriptome analysis. PLoS One, Volume 8 (Number 3). Article no. e60224. doi:10.1371/journal.pone.0060224

Vélez-Ramírez, Daniel E., Shimogawa, Michelle M., Ray, Sunayan S., Lopez, Andrew, Rayatpisheh, Shima, Langousis, Gerasimos, Gallagher-Jones, Marcus, Dean, Samuel, Wohlschlegel, James A., Hill, Kent L. and Phillips, Margaret (2021) APEX2 proximity proteomics resolves flagellum subdomains and identifies flagellum tip-specific proteins in Trypanosoma brucei. mSphere, 6 (1). e01090-20. doi:10.1128/mSphere.01090-20

Walker, Liam, Lagunas, Beatriz and Gifford, Miriam L. (2020) Determinants of host range specificity in Legume-Rhizobia symbiosis. Frontiers in Microbiology, 11 . 585749. doi:10.3389/fmicb.2020.585749

Wang, Daming, Romer, Frederik, Connell, Louise, Walter, Claudia, Saiz, Eduardo, Yue, Sheng, Lee, Peter D., McPhail, David S., Hanna, John V. and Jones, Julian R. (2015) Highly flexible silica/chitosan hybrid scaffolds with oriented pores for tissue regeneration. Journal of Materials Chemistry B, 3 (38). pp. 7560-7576. doi:10.1039/C5TB00767D

Wang, Haoqiu, Yang, Chao, Sun, Zhou, Zheng, Wei, Zhang, Wei, Yu, Hua, Wu, Yarong, Didelot, Xavier, Yang, Ruifu, Pan, Jingcao and Cui, Yujun (2020) Genomic epidemiology of Vibrio cholerae reveals the regional and global spread of two epidemic non-toxigenic lineages. PLOS Neglected Tropical Diseases, 14 (2). e0008046. doi:10.1371/journal.pntd.0008046

Wang, Ning, Chen, Xiu-Lan, Gao, Chao, Peng, Ming, Wang, Peng, Zhang, Na, Li, Fuchuan, Yang, Gui-Peng, Shen, Qing-Tao, Li, Shengying, Chen, Yin, Zhang, Yu-Zhong and Li, Chun-Yang (2021) Crystal structures of γ-glutamylmethylamide synthetase provide insight into bacterial metabolism of oceanic monomethylamine. Journal of Biological Chemistry, 296 . 100081. doi:10.1074/jbc.RA120.015952

Wang, Qianxi, Manmi, Kawa and Liu, Kuo-Kang (2015) Cell mechanics in biomedical cavitation. Interface focus, 5 (5). 20150018. doi:10.1098/rsfs.2015.0018

Wang, Yan, Wang, Peng, Cao, Hai-Yan, Ding, Hai-Tao, Su, Hai-Nan, Liu, Shi-Cheng, Liu, Guangfeng, Zhang, Xia, Li, Chun-Yang, Peng, Ming, Li, Fuchuan, Li, Shengying, Chen, Yin, Chen, Xiu-Lan and Zhang, Yu-Zhong (2022) Structure of Vibrio collagenase VhaC provides insight into the mechanism of bacterial collagenolysis. Nature Communications, 13 (1). 566. doi:10.1038/s41467-022-28264-1

Wang, Yun, Chen, Yin, Zhou, Qian, Huang, Shi, Ning, Kang, Xu, Jian, Kalin, Robert M., Rolfe, Stephen A. and Huang, Wei E. (2012) A culture-independent approach to unravel uncultured bacteria and functional genes in a complex microbial community. PLoS One, Vol.7 (No.10). e47530. doi:10.1371/journal.pone.0047530

Ward, Philip N., Holden, Matthew T. G., Leigh, James A., Lennard, Nicola, Bignell, Alexandra, Barron, Andy, Clark, Louise, Quail, Michael A., Woodward, John, Barrell, Bart G., Egan, Sharon A., Field, Terence R., Maskell, Duncan, Kehoe, Michael, Dowson, Christopher G. and Chanter, Neil (2009) Evidence for niche adaptation in the genome of the bovine pathogen Streptococcus uberis. BMC Genomics, Vol.10 . Article No. 54. doi:10.1186/1471-2164-10-54

Waschulin, Valentin, Borsetto, Chiara, James, Robert, Newsham, Kevin K., Donadio, Stefano, Corre, Christophe and Wellington, Elizabeth M. H. (2022) Biosynthetic potential of uncultured Antarctic soil bacteria revealed through long-read metagenomic sequencing. The ISME Journal, 16 . pp. 101-111. doi:10.1038/s41396-021-01052-3

Webber, Mark A., Whitehead, Rebekah N., Mount, Manuella, Loman, Nicholas J., Pallen, Mark J. and Piddock, Laura J. V. (2015) Parallel evolutionary pathways to antibiotic resistance selected by biocide exposure. Journal of antimicrobial chemotherapy, Volume 70 (Number 8). pp. 2241-2248. doi:10.1093/jac/dkv109

Wei, Tao, Zhao, Caimeng, Quareshy, Mussa, Wu, Nan, Huang, Shen, Zhao, Yuezhe, Yang, Pengfei, Mao, Duobin and Chen, Yin (2021) Glycolipid glycosyltransferase with broad substrate specificity from the marine bacterium “Candidatus Pelagibacter sp.” Strain HTCC7211. Applied and Environmental Microbiology, 87 (14). e00326-21. doi:10.1128/AEM.00326-21

Wei, Tao, Zhao, Caimeng, Quareshy, Mussa, Wu, Nan, Huang, Shen, Zhao, Yuezhe, Yang, Pengfei, Mao, Duobin, Chen, Yin and Atomi, Haruyuki (2021) A glycolipid glycosyltransferase with broad substrate specificity from the marine bacterium “Candidatus Pelagibacter sp.” Strain HTCC7211. Applied and Environmental Microbiology, 87 (14). e00326-21. doi:10.1128/AEM.00326-21

Wei, Zhen, Wilkinson, Rachael C., Rashid, Goran M. M., Brown, David, Fülöp, Vilmos and Bugg, Tim (2019) Characterisation of thiamine diphosphate-dependent 4-hydroxybenzoylformate decarboxylase enzymes from Rhodococcus jostii RHA1 and Pseudomonas fluorescens Pf-5 involved in degradation of aryl-C2 lignin degradation fragments. Biochemistry, 58 (52). pp. 5281-5293. doi:10.1021/acs.biochem.9b00177

Wentzel, Alexander, Bruheim, Per, Øverby, Anders, Jakobsen, Øyvind M, Sletta, Håvard, Omara, Walid A. M., Hodgson, D. A. and Ellingsen, Trond E. (2012) Optimized submerged batch fermentation strategy for systems scale studies of metabolic switching in Streptomyces coelicolor A3(2). BMC Systems Biology, Volume 6 . Article number 59. doi:10.1186/1752-0509-6-59

West, Nyree J., Lepère, Cécile, Manes, Carmem-Lara de O., Catala, Philippe, Scanlan, David J. and Lebaron, Philippe (2016) Distinct spatial patterns of SAR11, SAR86, and actinobacteria diversity along a transect in the ultra-oligotrophic South Pacific ocean. Frontiers in Microbiology, 7 . 234. doi:10.3389/fmicb.2016.00234

White, L. J., Schukken, Y. H., Lam, T. J. G. M., Medley, Graham and Chappell, M. J. (Michael J.) (2001) A multispecies model for the transmission and control of mastitis in dairy cows. Epidemiology and Infection, Vol.127 (No.3). pp. 567-576. doi:10.1017/S0950268801006100

Whittles, Lilith K., White, Peter J. and Didelot, Xavier (2020) Assessment of the potential of vaccination to combat antibiotic resistance in gonorrhea : a modeling analysis to determine preferred product characteristics. Clinical Infectious Diseases, 71 (8). pp. 1912-1919. ciz1241. doi:10.1093/cid/ciz1241

Whittock, Abigail, Turner, Matthew A. P., Coxon, Daniel J. L., Woolley, Jack Matthew, Horbury, Michael D. and Stavros, Vasilios G. (2020) Reinvestigating the photoprotection properties of a mycosporine amino acid motif. Frontiers in Chemistry, 8 . 574038. doi:10.3389/fchem.2020.574038

Whittock, Abigail L., Auckloo, Nazia, Cowden, Adam M., Turner, Matthew A. P., Woolley, Jack Matthew, Wills, Martin, Corre, Christophe and Stavros, Vasilios G. (2021) Exploring the blueprint of photoprotection in Mycosporine-like Amino Acids. The Journal of Physical Chemistry Letters, 12 (14). pp. 3641-3646. doi:10.1021/acs.jpclett.1c00728

Whittock, Abigail L., Woolley, Jack Matthew, Auckloo, Nazia, Corre, Christophe and Stavros, Vasilios G. (2022) Investigating the ultrafast dynamics and long-term photostability of an isomer pair, Usujirene and Palythene, from the Mycosporine-like amino acid family. Molecules, 27 (7). 2272. doi:10.3390/molecules27072272

(2016) Challenges in microbial ecology : building predictive understanding of community function and dynamics. The ISME Journal, 2016 (10). pp. 2557-2568. doi:10.1038/ismej.2016.45

Willen, Laura, Basáñez, Maria-Gloria, Dvorak, Vit, Veriegh, Francis B. D., Aboagye, Frank T., Idun, Bright, Elhadi Osman, Maha, Osei-Atweneboana, Mike Y., Courtenay, Orin and Volf, Petr (2021) Human immune response against salivary antigens of Simulium damnosmu s.l.: a new epidemiological marker for exposure to blackfly bites in onchocerciasis endemic areas. PLoS Neglected Tropical Diseases, 15 (6). e0009512. doi:10.1371/journal.pntd.0009512

Williamson, James J., Bahrin, Nurfariza, Hardiman, Elizabeth M. and Bugg, Timothy D. H. (2020) Production of substituted styrene bioproducts from lignin and lignocellulose using engineered pseudomonas putida KT2440. Biotechnology Journal, 15 (7). e1900571. doi:10.1002/biot.201900571

Wilson, W. H. (William H.), Tarran, Glen A. , Schroeder, Declan, Cox, M. J., Oke, Joanne and Malin, Gillian (2002) Isolation of viruses responsible for the demise of an Emiliania huxleyi bloom in the English Channel. Journal of the Marine Biological Association of the UK, Vol.82 (No.3). pp. 369-377. doi:10.1017/S002531540200560X

Wischer, Daniela, Kumaresan, Deepak, Johnston, Antonia, El Khawand, Myriam, Stephenson, Jason, Hillebrand-Voiculescu, Alexandra M., Chen, Yin and Murrell, J. C. (J. Colin) (2015) Bacterial metabolism of methylated amines and identification of novel methylotrophs in Movile Cave. The ISME Journal, 9 . pp. 195-206. doi:10.1038/ismej.2014.102

Wood, Graham, Burroughs, Nigel John, Evans, David J. and Ryabov, Eugene V. (2014) Error correction and diversity analysis of population mixtures determined by NGS. PeerJ PrePrints, Volume 2 . Article number e645. doi:10.7717/peerj.645

Woolley, Victoria C., Teakle, Graham R., Prince, Gillian, de Moor, C. H. and Chandler, Dave (2020) Cordycepin, a metabolite of Cordyceps militaris, reduces immune-related gene expression in insects. Journal of Invertebrate Pathology, 177 . 107480. doi:10.1016/j.jip.2020.107480

Wopfner, N., Willeroider, M., Hebenstreit, Daniel, Ree, R. van, Aalbers, M., Briza, P., Thalhamer, J., Ebner, C., Richter, K. and Ferreira, F. (2002) Molecular and immunological characterization of profilin from mugwort pollen. Biological Chemistry, Volume 383 (Number 11). pp. 1779-1789. doi:10.1515/BC.2002.199

Wright, Robyn J., Bosch, Rafael, Gibson, Matthew I. and Christie-Oleza, Joseph Alexander (2020) Plasticizer degradation by marine bacterial isolates : a proteogenomic and metabolomic characterization. Environmental Science & Technology, 54 (4). pp. 2244-2256. doi:10.1021/acs.est.9b05228

Wright, Robyn J., Gibson, Matthew I. and Christie-Oleza, Joseph Alexander (2019) Understanding microbial community dynamics to improve optimal microbiome selection. Microbiome, 7 (1). 85. doi:10.1186/s40168-019-0702-x

(2016) MUFINS : multi-formalism interaction network simulator. npj Systems Biology and Applications, 2 . 16032. doi:10.1038/npjsba.2016.32

Wu, Jianhua, Kendrick, Keith M. and Feng, Jianfeng (2007) A novel approach to detect hot-spots in large-scale multivariate data. BMC Bioinformatics, Vol.8 (No.331). doi:10.1186/1471-2105-8-331

Xie, Xin, Stubbington, Michael J. T., Nissen, Jesper K., Andersen, Kristian G., Hebenstreit, Daniel, Teichmann, Sarah A. and Betz, Alexander G. (2015) The regulatory T Cell lineage factor Foxp3 regulates gene expression through several distinct mechanisms mostly independent of direct DNA binding. PLoS Genetics, Volume 11 (Number 6). Article number e1005251. doi:10.1371/journal.pgen.1005251

Yahara, Koji, Nakayama, Shu-ichi, Shimuta, Ken, Lee, Ken-ichi, Morita, Masatomo, Kawahata, Takuya, Kuroki, Toshiro, Watanabe, Yuko, Ohya, Hitomi, Yasuda, Mitsuru, Deguchi, Takashi, Didelot, Xavier and Ohnishi, Makoto (2018) Genomic surveillance of Neisseria gonorrhoeae to investigate the distribution and evolution of antimicrobial-resistance determinants and lineages. Microbial Genomics, 4 (8). doi:10.1099/mgen.0.000205

Yang, Bu, Peng, Guangda, Li, Tianbang and Kadowaki, Tatsuhiko (2013) Molecular and phylogenetic characterization of honey bee viruses, Nosema microsporidia, protozoan parasites, and parasitic mites in China. Ecology and Evolution, Volume 3 (Number 2). pp. 298-311. doi:10.1002/ece3.464

Yang, Guowei and Waterfield, Nicholas R. (2013) The role of TcdB and TccC subunits in secretion of the photorhabdus Tcd toxin complex. PLoS Pathogens, Volume 9 (Number 10). Article number e1003644. doi:10.1371/journal.ppat.1003644

(2021) The relative and attributable risks of cardia and non-cardia gastric cancer associated with Helicobacter pylori infection in China : a case-cohort study. The Lancet Public Health, 6 (12). e888-e896. doi:10.1016/S2468-2667(21)00164-X

Yao, Pang, Millwood, Iona Y, Kartsonaki, Christiana, Mentzer, Alexander J., Allen, Naomi E., Jeske, Rima, Butt, Julia, Guo, Yue, Chen, Yiping, Walters, Robin G., Lv, Jun, Yu, Canqing, Plummer, Martyn, de Martel, Catherine, Clifford, Gary M., Li, Li-ming, Waterboer, Tim, Yang, Ling and Chen, Zhengming (2022) Sero-prevalence of 19 infectious pathogens and associated factors among middle-aged and elderly Chinese adults : a cross-sectional study. BMJ Open, 12 (5). e058353. doi:10.1136/bmjopen-2021-058353

Yaseen, Adiba, Gull, Sadaf, Akhtar, Naeem, Amin, Imran and Minhas, Fayyaz ul Amir Afsar (2021) HemoNet : predicting hemolytic activity of peptides with integrated feature learning. Journal of Bioinformatics and Computational Biology, 19 (5). 2150021. doi:10.1142/S0219720021500219

York, Anna, Lloyd, Adrian J., del Genio, Charo I., Shearer, Jonathan, Hinxman, Karen, Fritz, Konstantin, Fülöp, Vilmos, Dowson, Christopher G., Khalid, Syma and Roper, David I. (2021) Structure-based modeling and dynamics of MurM, a Streptococcus pneumoniae penicillin resistance determinant present at the cytoplasmic membrane. Structure, 29 (7). pp. 731-742. doi:10.1016/j.str.2021.03.001

Young, Anna, Stoilova-McPhie, Svetla, Rothnie, Alice, Vallis, Yvonne, Harvey-Smith, Phillip, Ranson, Neil, Kent, Helen, Brodsky, Frances M., Pearse, Barbara M. F., Roseman, Alan and Smith, Corinne J. (2013) Hsc70-induced changes in clathrin-auxilin cage structure suggest a role for clathrin light chains in cage disassembly. Traffic, Volume 14 (Number 9). pp. 987-996. doi:10.1111/tra.12085

Young, Lawrence S. (2015) Pathogens best paper awards for 2015. Pathogens, 4 (2). pp. 387-389. 00387. doi:10.3390/pathogens4020387

Yu, Jason S. L., Correia-Melo, Clara, Zorrilla, Francisco, Herrera-Dominguez, Lucia, Wu, Mary Y., Hartl, Johannes, Campbell, Kate, Blasche, Sonja, Kreidl, Marco, Egger, Anna-Sophia, Messner, Christoph B., Demichev, Vadim, Freiwald, Anja, Mülleder, Michael, Howell, Michael, Berman, Judith, Patil, Kiran R., Alam, Mohammad Tauqeer and Ralser, Markus (2022) Microbial communities form rich extracellular metabolomes that foster metabolic interactions and promote drug tolerance. Nature Microbiology, 7 (4). pp. 542-555. doi:10.1038/s41564-022-01072-5

Yuan, Yinyin, Li, Chang-Tsun and Wilson, Roland (2008) Partial mixture model for tight clustering of gene expression time-course. BMC Bioinformatics, Vol.9 (No.287). doi:10.1186/1471-2105-9-287

Yurkovich, Marie E., Jenkins, Robert, Sun, Yuhui, Tosin, Manuela and Leadlay, P. F. (2017) The polyketide backbone of thiolactomycin is assembled by an unusual iterative polyketide synthase. Chemical Communications, 53 (13). pp. 2182-2185. doi:10.1039/C6CC09934C

Zadjelovic, Vinko, Erni-Cassola, Gabriel, Obrador-Viel, Theo, Lester, Daniel, Eley, Yvette, Gibson, Matthew I., Dorador, Cristina, Golyshin, Peter N., Black, Stuart, Wellington, Elizabeth M. H. and Christie-Oleza, Joseph A. (2022) A mechanistic understanding of polyethylene biodegradation by the marine bacterium Alcanivorax. Journal of Hazardous Materials, 436 . 129278. doi:10.1016/j.jhazmat.2022.129278

Zambon, Paola, Palani, Saravanan, Sanjay Jadhav, Shekhar, Gayathri, Pananghat and Balasubramanian, Mohan K. (2020) Genetic suppression of defective profilin byaAttenuated myosin II reveals a potential role for myosin II in actin dynamics in vivo in fission yeast. Molecular Biology of the Cell, 31 (19). pp. 2093-2155. doi:10.1091/mbc.E20-04-0224

Zatulovskiy, Evgeny, Tyson, Richard A. (Richard Anthony), Bretschneider, Till and Kay, Robert R. (2014) Bleb-driven chemotaxis of Dictyostelium cells. The Journal of Cell Biology, 204 (6). pp. 1027-1044. doi:10.1083/jcb.201306147

Zerfaß, Christian, Christie-Oleza, Joseph Alexander and Soyer, Orkun S. (2018) Manganese oxide biomineralization is a social trait protecting. Applied and Environmental Microbiology, 85 (92). e02129-18. doi:10.1128/AEM.02129-18

Zhang, Chenyang, Liu, Senlin, Hussain, Sarfraz, Li, Lifeng, Baiome, Baiome Abdelmaguid, Xiao, Shuiqing and Cao, Hui (2022) Fe(II) addition drives soil bacterial co-ocurrence patterns and functions mediated by anaerobic and chemoautotrophic taxa. Microorganisms, 10 (3). e547. doi:10.3390/microorganisms10030547

Zhang, Dayi, Berry, James, Zhu, Di, Wang, Yun, Chen, Yin, Jiang, Bo, Huang, Shi, Langford, Harry, Li, Guanghe, Davison, Paul A., Xu, Jian, Aries, Eriv and Huang, Wei E. (2015) Magnetic nanoparticle-mediated isolation of functional bacteria in a complex microbial community. ISME Journal, 9 . pp. 603-614. doi:10.1038/ismej.2014.161

Zhang, Wen-Ying, Bridgewater, Hannah E., Banerjee, Samya, Soldevila-Barreda, Joan J., Clarkson, Guy J., Shi, Huayun, Imberti, Cinzia and Sadler, Peter J. (2020) Ligand-controlled reactivity and cytotoxicity of cyclometalated rhodium(III) complexes. European Journal of Inorganic Chemistry, 2020 (11-12). pp. 1052-1060. doi:10.1002/ejic.201901055

Zhou, Cong, Bowler, Lucas D. and Feng, Jianfeng (2008) A machine learning approach to explore the spectra intensity pattern of peptides using tandem mass spectrometry data. BMC Bioinformatics, Vol.9 (No.325). doi:10.1186/1471-2105-9-325

Zhou, Shanshan, Bhukya, Hussain, Malet, Nicolas, Harrison, Peter J. , Rea, Dean, Belousoff, Matthew J., Venugopal, Hariprasad, Sydor, Paulina K., Styles, Kathryn, Song, Lijiang, Cryle, Max J., Alkhalaf, Lona M., Fülöp, Vilmos, Challis, Gregory L. and Corre, Christophe (2021) Molecular basis for control of antibiotic production by a bacterial hormone. Nature, 590 (7846). pp. 463-467. doi:10.1038/s41586-021-03195-x

Zhou, Yu , Ryabov, Eugene V., Zhang, Xuemei and Hong, Yiguo (2008) Influence of viral genes on the cell-to-cell spread of RNA silencing. Journal of Experimental Botany, Vol.59 (No.10). pp. 2803-2813. doi:10.1093/jxb/ern141

Agama Study Group (Including: Zhou, Zhemin, Alikhan, Nabil-Fareed, Mohamed, Khaled, Fan, Yulei, Achtman, Mark and Tyne, William). (2019) The EnteroBase user's guide, with case studies on Salmonella transmissions, Yersinia pestis phylogeny and Escherichia core genomic diversity. Genome Research . 251678.119. doi:10.1101/gr.251678.119

Zhou, Zhemin, Alikhan, Nabil-Fareed, Sergeant, Martin J., Luhmann, Nina, Vaz, Cátia, Francisco, Alexandre P. , Carriço, João André and Achtman, Mark (2018) GrapeTree : visualization of core genomic relationships among 100,000 bacterial pathogens. Genome Research, 28 (10). pp. 1395-1404. doi:10.1101/gr.232397.117

Zhou, Zhemin, McCann, Angela, Litrup, Eva, Murphy, Ronan, Cormican, Martin, Fanning, Seamus, Brown, Derek, Guttman, David S., Brisse, Sylvain and Achtman, Mark (2013) Neutral genomic microevolution of a recently emerged pathogen, salmonella enterica serovar agona. PLoS Genetics, 9 (4). e1003471. doi:10.1371/journal.pgen.1003471

Zhou, Zhichao, Chen, Jing, Cao, Huiluo, Han, Ping and Gu, Ji-Dong (2015) Analysis of methane-producing and metabolizing archaeal and bacterial communities in sediments of the northern South China Sea and coastal Mai Po Nature Reserve revealed by PCR amplification of mcrA and pmoA genes. Frontiers in Microbiology, 5 . 789. doi:10.3389/fmicb.2014.00789

Zhu, Chongyu, Schneider, Elena K., Nikolaou, Vasiliki, Klein, Tobias, Li, Jian, Davis, Thomas P., Whittaker, Michael R., Wilson, Paul, Kempe, Kristian, Velkov, Tony and Haddleton, David M. (2017) Hydrolyzable poly[poly(ethylene glycol) methyl ether acrylate]–colistin prodrugs through copper-mediated photoinduced living radical polymerization. Bioconjugate Chemistry . doi:10.1021/acs.bioconjchem.7b00242

Zhu, Chongyu, Schneider, Elena K., Wang, Jiping, Kempe, Kristian, Wilson, Paul, Velkov, Tony, Li, Jian, Davis, Thomas P., Whittaker, Michael R. and Haddleton, David M. (2017) A traceless reversible polymeric colistin prodrug to combat multidrug-resistant (MDR) gram-negative bacteria. Journal of Controlled Release, 259 . pp. 83-91. doi:10.1016/j.jconrel.2017.02.005

Zhu, Yijun , Jameson, Eleanor, Parslow, Rosemary A., Lidbury, Ian, Fu, Tiantian, Dafforn, Tim, Schäfer, Hendrik and Chen, Yin (2014) Identification and characterization of trimethylamine N-oxide (TMAO) demethylase and TMAO permease in Methylocella silvestris BL2. Environmental Microbiology, 16 (10). pp. 3318-3330. doi:10.1111/1462-2920.12585

Zhu, Yizhu, Purdy, Kevin J., Eyice, Özge, Shen, Lidong, Harpenslager, Sarah F., Yvon-Durocher, Gabriel, Dumbrell, Alex and Trimmer, Mark (2020) Disproportionate increase in freshwater methane emissions induced by experimental warming. Nature Climate Change, 10 (7). pp. 685-690. doi:10.1038/s41558-020-0824-y

Zubkov, Mikhail V. , Martin, Adrian P., Hartmann, Manuela, Grob, Carolina and Scanlan, David J. (2015) Dominant oceanic bacteria secure phosphate using a large extracellular buffer. Nature Communications, 6 . 7878. doi:10.1038/ncomms8878

(2015) Carbohydrate scaffolds as glycosyltransferase inhibitors with in vivo antibacterial activity. Nature Communications, 6 . pp. 1-11. 7719. doi:10.1038/ncomms8719

de Klerk, Joanna N. and Robinson, Philip A. (2022) Drivers and hazards of consumption of unpasteurised bovine milk and milk products in high-income countries. PeerJ, 10 . e13426. doi:10.7717/peerj.13426

den Bakker, Henk C., Didelot, Xavier, Fortes, Esther D, Nightingale, Kendra K and Wiedmann, Martin (2008) Lineage specific recombination rates and microevolution in Listeria monocytogenes. BMC Evolutionary Biology, Vol. 8 (No. 27). doi:10.1186/1471-2148-8-277

van Damme, Mireille, Bozkurt, Tolga O., Cakir, Cahid, Schornack, Sebastian, Sklenar, Jan, Jones, Alexandra M. and Kamoun, Sophien (2012) The Irish potato famine pathogen Phytophthora infestans translocates the CRN8 kinase into host plant cells. PLoS Pathogens, Volume 8 (Number 8). Article number e1002875. doi:10.1371/journal.ppat.1002875

van den Brink, Deborah A., de Meij, Tim, Brals, Daniella, Bandsma, Robert H. J., Thitiri, Johnstone, Ngari, Moses, Mwalekwa, Laura, de Boer, Nanne K. H., Wicaksono, Alfian, Covington, James A., van Rheenen, Patrick F. and Voskuijl, Wieger P. (2020) Prediction of mortality in severe acute malnutrition in hospitalized children by faecal volatile organic compound analysis : proof of concept. Scientific Reports, 10 (1). 18785. doi:10.1038/s41598-020-75515-6

van der Ploeg, René, Mäder, Ulrike, Homuth, Georg, Schaffer, Marc, Denham, Emma, Monteferrante, Carmine G., Miethke, Marcus, Marahiel, Mohamed A., Harwood, Colin R., Winter, Theresa, Hecker, Michael, Antelmann, Haike and Dijl, Jan Maarten van (2011) Environmental salinity determines the specificity and need for tat-dependent secretion of the YwbN protein in bacillus subtilis. PLoS One, Volume 6 (Number 3). Article number e18140. doi:10.1371/journal.pone.0018140

Öster, Carl, Walkowiak, Grzegorz P., Hughes, Dallas E., Spoering, Amy L., Peoples, Aaron J., Catherwood, Anita C., Tod, Julie A., Lloyd, Adrian J., Herrmann, Torsten, Lewis, Kim, Dowson, Christopher G. and Lewandowski, Józef R. (2018) Structural studies suggest aggregation as one of the modes of action for teixobactin. Chemical Science, 9 (47). pp. 8850-8859. doi:10.1039/c8sc03655a

Özkanca, R., Saribiyik, F., Isik, K., Sahin, N., Kariptas, E. and Flint, Ken P. (2007) Resuscitation and quantification of stressed Escherichia coli K12 NCTC8797 in water samples. Microbiological Research, Vol.16 (No.2). pp. 212-220. doi:10.1016/j.micres.2006.11.014

Book Item

Lassalle, Florent and Didelot, Xavier (2020) Bacterial microevolution and the Pangenome. In: Tettelin, H. and Medini, D., (eds.) The Pangenome. Cham: Springer, pp. 129-149. ISBN 9783030382803

Conference Item

Kulkarni, Vishwesh V., El Menjra, Lina, Carbonell, Pablo and Faulon, Jean-Loup (2016) Integrated predictive genome-scale models to improve the metabolic re-engineering efficiency. In: 8th International Workshop on Bio-Design Automation, Newcastle-upon-Tyne, UK, 16-18 Aug 2016

Langenkämper, Daniel, Kölling, Jan, Abouna, Sylvie, Khan, Michael, Niehaus, Karsten and Nattkemper, Tim W. (2011) TICAL - a web-tool for multivariate image clustering and data topology preserving visualization. In: MIAAB 2011 (Microscopic Image Analysis with Applications in Biology), Heidelberg, Germany, 2 Sep 2011. Published in: Proceedings of the 2011 Microscopic Image Analysis with Applications in Biology pp. 1-5.

Minghini, Marco, Coetzee, Serena, Grinberger, A. Yair, Yeboah, Godwin, Juhász, Levente and Mooney, Peter (2020) Editorial : OpenStreetMap research in the COVID-19 era. In: State of the Map 2020, Online (originally planned in Cape Town, South Africa), 4-5 Jul 2020 pp. 1-4. doi:10.5281/zenodo.3922054

Rossello, M. R., Griffiths, Nathan, Kalvala, Sara, Wellington, E. M. H. and Gaze, William H. (2009) Networking strategies in streptomyces coelicolor. In: 2nd International Conference on Bioinformatics and Systems Biology (BSB 2009), Leipzig, Germany, 23-25 March 2009 (Unpublished)

Vicente, Joana G. and Roberts, Steven J. (2001) Diversity of Pseudomonas syringae isolates from sweet and wild cherry. In: 11th Congress of the Mediterranean Phytopathological Union and 3rd Congress of the Sociedade Portuguesa de Fitopatologia, Évora, Portugal, 17-20 Sep 2001. Published in: Proceedings of the 11th Congress of the Mediterranean Phytopathological Union and 3rd Congress of the Sociedade Portuguesa de Fitopatologia University of Évora, Year: 2001 Pages: 29-31 pp. 29-31.

Working or Discussion Paper

Boyes, Hugh (2020) Modelling national scale events : what lessons can we learn from the Covid-19 pandemic? Working Paper. Coventry, UK: University of Warwick. WMG. (Unpublished)

Jiang, Xue, Zerfaß, Christian, Eichmann, Ruth, Asally, Munehiro, Schäfer, P. (Patrick) and Soyer, Orkun S. (2017) Impact of spatial organization on a novel auxotrophic interaction among soil microbes. UNSPECIFIED. BioRxiv: Cold Spring Harbour Laboratories. (Submitted)

Taylor-Joyce, Grace, Manoharan, Shathviga, Brooker, Thomas, Hernandez-Rodrıguez, Carmen Sara, Baillie, Les, Oyston, Petra C. F., Hapeshi, Alexia and Waterfield, Nicholas R. (2022) The influence of extrachromosomal elements in the anthrax “cross-over” strain Bacillus cereus G9241. Working Paper. BioRxiv. (Submitted)

Van Boeckel, Thomas P., Tildesley, Michael J., Linard, Catherine, Halloy, José, Keeling, Matthew James and Gilbert, Marius (2013) The Nosoi commute : a spatial perspective on the rise of BSL-4 laboratories in cities. UNSPECIFIED. Cornell University: arXiv. (Unpublished)

Zhou, Zhemin, Alikhan, Nabil-Fareed, Sergeant, Martin J., Luhmann, Nina, Vaz, Catia, Francisco, Alexandre P., Carrico, Joao Andre and Achtman, Mark (2017) GrapeTree : visualization of core genomic relationships among 100,000 bacterial pathogens. Working Paper. BioRxiv: Cold Spring Harbour.

Zhou, Zhemin, Luhmann, Nina, Alikhan, Nabil-Fareed, Quince, Christopher and Achtman, Mark (2017) Accurate reconstruction of microbial strains using representative reference genomes. Working Paper. BioRxiv: Cold Spring Harbour.

Zhou, Zhemin, Lundstrøm, Inge, Tran-Dien, Alicia, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Christophersen, Axel, Quince, Christopher, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon Y. W., Gilbert, M. Thomas P. and Achtman, Mark (2017) Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica. Working Paper. BioRxiv: Cold Spring Harbour.

Journal Item

Bavaharan, Abhirame and Skilbeck, Christopher (2022) Electrical signalling in prokaryotes and its convergence with quorum sensing in Bacillus. BioEssays, 44 (4). 2100193. doi:10.1002/bies.202100193

(2009) Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature, Volume 461 (Number 7262). pp. 393-398. doi:10.1038/nature08358

Habershon, Scott and Baker, Lewis A. (2017) Photosynthetic pigment-protein complexes as highly-connected networks : implications for robust energy transport. Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences, 473 (2201). doi:10.1098/rspa.2017.0112

Mahida, Rahul Y., Scott, Aaron, Parekh, Dhruv, Lugg, Sebastian T., Hardy, Rowan S., Lavery, Gareth G., Matthay, Michael A., Naidu, Babu, Perkins, Gavin D. and Thickett, David R. (2021) Acute respiratory distress syndrome is associated with impaired alveolar macrophage efferocytosis. European Respiratory Journal, 58 (3). 2100829. doi:10.1183/13993003.00829-2021

(2010) Supplementary information to support : 'Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity'. Nature Genetics, 42 (12). pp. 1140-1143. doi:10.1038/ng.705

Pillay, Thillagavathie, Toldi, Gergely, Hussain, Abid, Magwenzi, Mercy Murinye, Satodia, Prakash and Radcliffe, Ruth (2022) Neonatal BCG : a time for change. Archives of disease in childhood - Education & practice edition . doi:10.1136/archdischild-2021-323239 (In Press)

Souzy, Mathieu, Allard, Antoine, Louf, Jean-François, Contino, Matteo, Tuval, Idan and Polin, Marco (2022) Microbial narrow-escape is facilitated by wall interactions. Physical Review Research, 4 (2). L022029. doi:10.1103/PhysRevResearch.4.L022029

Sáez Conde, Julia and Dean, Samuel (2022) Structure, function and druggability of the African trypanosome flagellum. Journal of Cellular Physiology, 237 (6). pp. 2654-2667. doi:10.1002/jcp.30778

Thesis

Abbasi, Sophia Y. (1998) A molecular genetic investigation into 2-methyl-3-amyl-6-methoxyprodigiosene (prodigiosin) biosynthesis in Serratia marcescens. PhD thesis, University of Warwick.

Abrahams, Katherine A. (2011) The enzymology of Streptococcus pneumoniae peptidoglycan polymerisation. PhD thesis, University of Warwick.

Agbroko, Samuel O. (2019) A low cost gas phase analysis system for the diagnosis of bacterial infection. PhD thesis, University of Warwick.

Ajaykumar, Rohini (2021) Functional and structural insights into one-component transcriptional regulators involved in methylenomycin production in Streptomyces coelicolor A3(2). PhD thesis, University of Warwick.

Albiniak, A. M. (2012) Characterization and exploitation of inner membrane proteins in Escherichia coli. PhD thesis, University of Warwick.

Alford, Justine E. (2013) The interaction of HIV with cellular trafficking pathways. PhD thesis, University of Warwick.

Ali, Hanif (2006) Development of genetic tools in methanotrophs and the molecular regulation of methane monooxygenase. PhD thesis, University of Warwick.

Alkhalaf, Lona M. (2013) Structure, function and substrate tolerance of TxtC. PhD thesis, University of Warwick.

Alley, Michael Richard Kevin (1987) Molecular biological aspects of nitrogen starvation in cyanobacteria. PhD thesis, University of Warwick.

Alnaji, Fadi (2016) Isolation and analysis of recombinants from mixed virus infections of poliovirus using next generation sequencing (NGS) and bioinformatics. PhD thesis, University of Warwick.

Amos, Gregory C. A. (2013) Environmental reservoirs of antibiotic resistance. PhD thesis, University of Warwick.

Arslanoglu, Alper (1999) Studies of the adenovirus 5 L1 gene aimed at developing L1 gene deficiencies for use in gene therapy vectors. PhD thesis, University of Warwick.

Ashraf, William (1990) The genetics and biochemistry of a propane-utilizing "Rhodococcus rhodochrous". PhD thesis, University of Warwick.

Avkiran, Timur (2020) The development of small molecule inhibitors of mycobacterium protein tyrosine phosphatase B for the treatment of mycobacterium tuberculosis. PhD thesis, University of Warwick.

Baglieri, J. (2012) Assembly and mechanism of bacterial twin-arginine translocation systems. PhD thesis, University of Warwick.

Bains, William (1982) The structure of cloned histone genes of Xenopus borealis. PhD thesis, University of Warwick.

Baker, Alexander Neil (2021) Nano-probes for point of care diagnostics. PhD thesis, University of Warwick.

Baker, Phillip Nigel (1980) A study on the control of interferon production in lymphoblastoid cells. PhD thesis, University of Warwick.

Bamford, Kate Emily (2021) The role of intramammary masses on the transmission and persistence of mastitis-associated pathogens, flock prevalence and the live weight of lambs. PhD thesis, University of Warwick.

Barnett, James Paul (2009) Organisation and mechanism of bacterial twin arginine translocases. PhD thesis, University of Warwick.

Barona Gómez, Francisco (2003) Functional and structural genomics of amino acid metabolism in Streptomyces coelicolor. PhD thesis, University of Warwick.

Barr, David William (1989) Comparison of iron oxidation by acidophilic bacteria. PhD thesis, University of Warwick.

Bateman, Colin Neil (2009) Investigating gene induction in Listeria monocytogenes during growth in complex media or tissue culture. PhD thesis, University of Warwick.

Becker, Patrick (2021) Structural and functional characterization of a bile acid sodium symporter from Neisseria meningitidis. PhD thesis, University of Warwick.

Beeching, John Rutland (1984) The transfer and stability of the dehalogenase I gene of 'Pseudomonas putida' PP3. PhD thesis, University of Warwick.

Bicz, Joanna (2013) Investigations of siderophore and tetronic acid biosynthesis in streptomyces scabies 87.22. PhD thesis, University of Warwick.

Bloye, Stephen A. (1992) Responses of unicellular cyanobacteria to changes in their carbon regime. PhD thesis, University of Warwick.

Boden, Rich (2009) Metabolism of dimethylsulfide in the bacteria. PhD thesis, University of Warwick.

Borsetto, Chiara (2017) Study and exploitation of diverse soil environments for novel natural product discovery using metagenomic approaches. PhD thesis, University of Warwick.

Braddick, Darren (2012) Quantitative assay methods and mathematical modelling of peptidoglycan transglycosylation. PhD thesis, University of Warwick.

Breadon, Robert Leslie (1988) Development of a system of genetic analyses for Rhodomicrobium vannielii. PhD thesis, University of Warwick.

Breeze, Emily (2014) Action of the AtNF-Y transcription factors in plant stress responses. PhD thesis, University of Warwick.

Brehm, John Karl, 1959- (1989) Studies towards the development of a host:vector system for the genus Clostridium. PhD thesis, University of Warwick.

Bright, John (1983) The physiological activity of attached bacteria. PhD thesis, University of Warwick.

Brind, Robert Ian (2000) The characterisation of Plc1 : a phospholipase C enzyme identified in the fission yeast Schizosaccharomyces pombe. PhD thesis, University of Warwick.

Brooker, Thomas Adam (2019) Temperature-dependent regulation in the Bacillus cereus-Bacillus anthracis crossover strain, Bacillus cereus G9241. PhD thesis, University of Warwick.

Broughton, Claire E. (2015) A predictive model of bacterial cell division. PhD thesis, University of Warwick.

Brown, Jason Lee (2000) Expression systems for adenovirus late proteins. PhD thesis, University of Warwick.

Brown, Richard Henry (1969) A study of the cell envelope of Halobacterium salinarium. PhD thesis, University of Warwick.

Bryan, Samantha Jane (2003) Carotenoid regulation in Myxococcus xanthus. PhD thesis, University of Warwick.

Brzeski, Henry (1977) The synthesis and function of the nonstructural polypeptides of Sindbis virus. PhD thesis, University of Warwick.

Buraschi, Simone (2020) The biology of decorin in the tumor microenvironment. PhD thesis, University of Warwick.

Burgess, Beverley Jane (1993) The biological properties of Shiga-like toxin I. PhD thesis, University of Warwick.

Byrne, Lisa Anne (2017) The epidemiology of Shiga toxin-producing Escherichia coli (STEC) in England, and the impact of advanced diagnostics on our understanding and control. PhD thesis, University of Warwick.

Caamano-Gutierrez, Eva (2016) The effect of diet on Plasmodium falciparum development revealed by NMR metabolomics and image analysis. PhD thesis, University of Warwick.

Caravokyri, Calliope (1990) Characterization of temperature-sensitive mutants of human respiratory syncytial (RS) virus. PhD thesis, University of Warwick.

Carbonero, Franck (2010) Distributions of model microorganisms along an estuarine gradient. PhD thesis, University of Warwick.

Cardy, Donald Leonard Nicholas (1989) The molecular biology of ammonia assimilation in the obligate methanotroph Methylococcus capsulatus strain Bath. PhD thesis, University of Warwick.

Cardy, Susan Mary (1989) Lactobacillus leichmannii as a probe for the quantitation of vitamin B-12. PhD thesis, University of Warwick.

Carroll, Daire (2021) A quantitative framework for studying bacterial colonisation of the rhizoplane. PhD thesis, University of Warwick.

Carter, Andrew T. (1985) VL30 : a mouse retrovirus-like family of repetitive DNA elements. PhD thesis, University of Warwick.

Chadd, Helen E. (1992) Biochemical and molecular approaches to the study of iron nutrition in the marine cyanobacterium synechococcus WH 7803. PhD thesis, University of Warwick.

Chaddock, John Andrew (1992) Structure-function relationships of ricin A-chain. PhD thesis, University of Warwick.

Chaivimol, Jittra (1995) The study of peptide toxins from freshwater cyanobacteria. PhD thesis, University of Warwick.

Chambers, Stephen Alexander (1989) The production, purification and catalytic utility of lignin peroxidase from "sporotrichum pulverulentum". PhD thesis, University of Warwick.

Chambers, Stephen P. (1989) Construction, characterisation and utilisation of a novel E. coli expression vector. PhD thesis, University of Warwick.

Chan, Yi-Wah (2010) Characterisation of bacteriophages that infect Acaryochloris. PhD thesis, University of Warwick.

Chatwin, Heather M. (1994) Molecular genetic analysis of chemical-induced sporulation of Myxococcus xanthus. PhD thesis, University of Warwick.

Chawdhri, Rizwana F. (1992) The distribution and diversity of nucleoside N-deoxyribosyltransferase among lactic acid bacteria. PhD thesis, University of Warwick.

Cheffings, Thomas H. (2018) Investigating the roles of turnover and mobility in the actomyosin ring of Schizosaccharomyces pombe. PhD thesis, University of Warwick.

Cheng, Xi, Ph.D. (2011) Dynamic assembly, disassembly and bundling of the bacterial cell division protein FtsZ and YgfE (ZapA). PhD thesis, University of Warwick.

Chhun, Audam (2020) Antimicrobial potential of the marine actinomycete salinispora tropica cnb-440 in co-culture : a metabolomic, proteomic and genome engineering approach. PhD thesis, University of Warwick.

Chu, Jie (2012) Towards and understanding of multiple paralogues for metal-handling genes in a coastal cyanobacterium. PhD thesis, University of Warwick.

Clark, Darren Alan (1995) The study of acidophilic, moderately thermophilic iron-oxidizing bacteria. PhD thesis, University of Warwick.

Clarke, Ian Nicholas (1982) Genomic variation in rotaviruses. PhD thesis, University of Warwick.

Cleary, David William (2012) Detection of microbial taxa in complex communities : impacts of relative abundance, gene transfer and persistence of target DNA. PhD thesis, University of Warwick.

Cock, Peter J. A. (2008) Two-component regulation: modelling, predicting & identifying protein-protein interactions & assessing signalling networks of bacteria. PhD thesis, University of Warwick.

Coker, Timothy L. R. (2016) Infection-site-specific responses of Arabidopsis thaliana to the biotrophic oomycete Hyaloperonospora arabidopsidis. PhD thesis, University of Warwick.

Colby, Susan Mary (1993) Pathogenicity studies on verocytotoxin-producing Escherichia coli : bacterial adhesion, toxin expression and uptake. PhD thesis, University of Warwick.

Contino, Matteo (2017) Characterisation and control of the dynamical properties of swimming microorganisms under confinement. PhD thesis, University of Warwick.

Cooper, Jonathan Alstead (1976) The effects of interferon and double-stranded RNA. PhD thesis, University of Warwick.

Coulson, Nicholas Michael (1993) Expression of the protective antigen of bacillus anthracis in attenuated salmonella : a potential oral anthrax vaccine. PhD thesis, University of Warwick.

Cowan, Richard H. (2009) Refolding of protein kinases. PhD thesis, University of Warwick.

Cox, Simon Peter (1992) Iron oxidation and mineral oxidation by moderately thermophilic bacteria. PhD thesis, University of Warwick.

Craven, Mark Antony (1997) Bacteria classification with an electronic nose employing artificial neural networks. PhD thesis, University of Warwick.

Croll, Andrew David (1986) The regulation of polyclonal mitogen-stimulated human gamma-interferon production. PhD thesis, University of Warwick.

Crombie, Andrew (2011) Metabolism of methane and propane and the role of the glyoxylate bypass enzymes in Methylocella silvestris BL2. PhD thesis, University of Warwick.

Dabrowska, Alicja (2017) Opening up the black box of marine phototroph-heterotroph interactions. PhD thesis, University of Warwick.

Davey, John (1984) The accumulation of the influenza virus nucleoprotein in the nuclei of 'xenopus' oocytes. PhD thesis, University of Warwick.

Davidson, Sylvia (1992) The development of genetic techniques for the obligate methanotroph, Methylococcus Capsulatus (Bath). PhD thesis, University of Warwick.

Davies, Adrienne (2015) Microbial quality control management in industry : approaches for assessing bioburden and community composition. PhD thesis, University of Warwick.

Dedman, Craig J. (2021) Nano-pollutants – big impact? Investigating the ecotoxicological effects of nanomaterials in our oceans. PhD thesis, University of Warwick.

Dee, Chris T. (2004) Analysis of slmo, a gene required for normal motor function in Drosophila melanogaster. PhD thesis, University of Warwick.

Derbyshire, Paul (1986) Plasmid maintenance in Escherichia coli K-12. PhD thesis, University of Warwick.

Dilger, Erin (2013) The effects of host-vector relationships and density dependence on the epidemiology of visceral leishmaniasis. PhD thesis, University of Warwick.

Dimmock, John (2002) Functional interactions of the adenovirus serotype 5E4orf3 protein. PhD thesis, University of Warwick.

Doherty, Neil Christopher (2000) A molecular analysis of hyaluronate lyase production in Streptococcus pneumoniae. PhD thesis, University of Warwick.

Dow, Crawford S. (1973) Morphology and physiology of morphologically unusual bacteria. PhD thesis, University of Warwick.

Drummond, James A. (1999) Cloning of two neurally expressed genes found adjacent to P[GAL4]307, a marker of the giant fibre circuit, in Drosophila melanogaster. PhD thesis, University of Warwick.

Edwards, Richard James (2014) An investigation into the structure and function of VanS proteins involved in the two-component VanS/VanR regulatory system controlling antibiotic resistance. PhD thesis, University of Warwick.

Eriksson, Inger Viktoria (2013) The response of synechococcus sp. CC9311 to iron stress. PhD thesis, University of Warwick.

Eyice, Özge (2012) Diversity and activity of microorganisms degrading methylated sulphur compounds in terrestrial environments. PhD thesis, University of Warwick.

Fatemian, Koorosh Amir (2021) Characterisation of the lipid II-teixobactin interaction by solid state NMR. PhD thesis, University of Warwick.

Fenn, Jonathan (2019) Molecular characterisation of the UgpB substrate binding protein from Mycobacterium tuberculosis. PhD thesis, University of Warwick.

Fetherston, Richard (2018) Functional genomics of methylated sulfur compound metabolism in Hyphomicrobium species. PhD thesis, University of Warwick.

Flawith, John William (1979) Intracellular locations of influenza virus proteins. PhD thesis, University of Warwick.

Flaxman, Christine Susan (1995) A study of the regulation of undecylprodigiosin biosynthesis in Streptomyces coelicolor A3(2). PhD thesis, University of Warwick.

Forshaw, Sam (2022) Synthesis and reactivity of novel biaryl strained alkynes. PhD thesis, University of Warwick.

Fox, Sian L. (1992) Verocytotoxin expression in Escherichia coli. PhD thesis, University of Warwick.

France, Andrew D. (1978) Morphogenesis and differentiation in Rhodomicrobium. PhD thesis, University of Warwick.

Frost, Lucy R. (2021) Dissecting host-pathogen interactions of Clostridioides difficile. PhD thesis, University of Warwick.

Fu, Tiantian (2017) Quaternary amine metabolism in gut microbiota. PhD thesis, University of Warwick.

Fuller, Nicholas J. (1998) Molecular approaches to the study of marine cyanophages. PhD thesis, University of Warwick.

Fullwood, Alexander James (2019) Biochemical investigations of TetR-family regulators that control antibiotic biosynthesis in Streptomyces bacteria. PhD thesis, University of Warwick.

Galley, Nicola F. (2015) The role of species-specific modifications in peptidoglycan biosynthesis. PhD thesis, University of Warwick.

Gibbs, Thomas W. (1991) An investigation into FtsE and the 76 minute morphogene cluster in "Escherichia coli". PhD thesis, University of Warwick.

Gibson, F. Elizabeth (1991) The development of genetic systems for iron-oxidizing, acidophilic moderate thermophiles. PhD thesis, University of Warwick.

Gill, Deborah R. (1986) Characterisation of a novel cell division operon in "E. coli" K-12. PhD thesis, University of Warwick.

Godfrey, Emma L. (2009) Investigating the signalling characteristics of Gα subunits in the fission yeast Schizosaccharomyces pombe. PhD thesis, University of Warwick.

Godwin, Dianne (1980) The influence of the growth environment on the stability of a drug resistant plasmid in Escherichia coli K12 grown in chemostat culture. PhD thesis, University of Warwick.

Gorham, Hazel Claire (1987) Characterisation of a novel bacteriophage, 0BHG1 : and its interactions with its host "Rhodopseudomonas blastica". PhD thesis, University of Warwick.

Graham, James Fionnlagh (2009) An investigation into the subcellular localisation of co-factors that stimulate prion protein conversion. PhD thesis, University of Warwick.

Graves, Malcolm G. (1976) Studies on the adenylate cyclase system of Tetrahymena pyriformis. PhD thesis, University of Warwick.

Griffiths, Daniel (2016) Biosynthesis and discovery of compounds with activity against Acinetobacter baumannii. PhD thesis, University of Warwick.

Griffiths, Scott Andrew (2009) Adaptation and population dynamics arising from the bacteriophage-host system ΦC31-Streptomyces coelicolor M145. PhD thesis, University of Warwick.

Grigonyte, Aurelija (2018) Engineering Bacteriophages to Enhance their Potential use in Therapy. PhD thesis, University of Warwick.

Grobas, Iago (2021) Biophysical mechanisms of antimicrobial resistance in swarming B. subtilis. PhD thesis, University of Warwick.

Grypioti, Maria (2021) The development of carbohydrate tools to understand nutrient uptake and metabolism in mycobacteria. PhD thesis, University of Warwick.

Hall, Holly E. (2017) The sporulation-specific small regulatory RNAs of Bacillus subtilis. PhD thesis, University of Warwick.

Hampson, Jane (1987) A study of the genetics and growth of a tripartite RNA virus using ts mutants. PhD thesis, University of Warwick.

Hardman, David J. (1980) Dehalogenases in soil bacteria. PhD thesis, University of Warwick.

Harrington, Niamh Ellen (2022) Phenotypic and transcriptomic characterisation of pseudomonas aeruginosa biofilm infection in an ex vivo model of the cystic fibrosis lung. PhD thesis, University of Warwick.

Harris, Keith J. (1990) The chemoenzymatic preparation of optically active molecules. PhD thesis, University of Warwick.

Harrison, Lesley Ann (1985) The characterisation of a cellulolytic microbial community isolated from soil. PhD thesis, University of Warwick.

Hart, Philip John (2010) The cytosolic fate of ricin A chain in target cells. PhD thesis, University of Warwick.

Hartree, David E. (1989) Cloning and characterisation of developmental genes in "Myxococcus xanthus" using a plasmid based promoter probe. PhD thesis, University of Warwick.

Hassall, Jack (2019) Engineering a synthetic gut model to explore microbial infections. PhD thesis, University of Warwick.

Hatton, Caitlin (2021) Structural and functional characterisation of a cytosine transporter. PhD thesis, University of Warwick.

Hay, Steven C. (1990) Regulation of C1 metabolism in Methylococcus capsulatus (Bath). PhD thesis, University of Warwick.

Healey, Joseph R. J. (2018) Photorhabdus virulence cassettes: understanding the structure, and genomic role, of a novel bacterial protein delivery mechanism. PhD thesis, University of Warwick.

Hearn, Jessica M. (2015) Integrating cell screening and mechanism of action data for organometallic anticancer agents. PhD thesis, University of Warwick.

Henshaw, Richard Jeffery (2019) The dynamics of phototaxis in photosynthetic microorganisms. PhD thesis, University of Warwick.

Herron, Paul Robert (1991) Interactions between actinophage and streptomycetes in soil. PhD thesis, University of Warwick.

Hey, Kirsty L. (2015) The temporal and spatial analysis of single cell gene expression. PhD thesis, University of Warwick.

Hicks, Nicola (1992) The enzymatic and chemical synthesis of nucleoside analogues using N-deoxyribosyltransferase from Lactobacillus leichmannii. PhD thesis, University of Warwick.

Hill, Gemma (2016) Investigating wastewater treatment plant impact on antibiotic resistance within UK river systems. PhD thesis, University of Warwick.

Hinton, Jay C. D. (1986) Development and application of molecular genetic techniques in 'Erwinia carotovora' subsp. 'carotovora'. PhD thesis, University of Warwick.

Holmes, Antony (2009) Understanding morphogenesis in myxobacteria from a theoretical and experimental perspective. PhD thesis, University of Warwick.

Hood, Derek W. (1985) The application of molecular biology techniques to the taxonomy of the pink pigmented facultative methylotrophs. PhD thesis, University of Warwick.

Horta de Passo, Vânia (2016) Molecular genetics of interactions between Xanthomonas campestris pv. raphani and Arabidopsis thaliana. PhD thesis, University of Warwick.

Housby, J. Nicholas (1993) The isolation and characterisation of conditional (Outs[superscript ts]) and null (Out[superscript -]) secretion mutants of Erwinia carotovora subspecies carotovora (SCRI193). PhD thesis, University of Warwick.

Howard, Katharine Mary (1990) Carbon metabolism and growth of marine unicellular cyanobacteria belonging to the genus "Synechococcus". PhD thesis, University of Warwick.

Idowu, Gideon Aina (2017) Investigations into the biosynthesis and mode of action of methylenomycin antibiotics from Streptomyces coelicolor. PhD thesis, University of Warwick.

Ingham, Victoria A. (2015) Identification of novel transcripts involved in insecticide resistance in African malaria vectors. PhD thesis, University of Warwick.

Jakubovics, Nicholas S. (1998) Biofilms in the potable water distribution network. PhD thesis, University of Warwick.

Jefferyes, Samuel, D. R. (2014) Modelling shape fluctuations during cell migration. PhD thesis, University of Warwick.

Jia, Ying (2009) An investigation into the adsorption of cyanophages to their cyanobacterial hosts. PhD thesis, University of Warwick.

Jian, Xinyun (2018) Elucidation of molecular mechanisms of antibiotics biosynthesis in Burkholderia gladioli. PhD thesis, University of Warwick.

Jiang, Xue (2018) Constructing a synthetic microbial community based on Serendipita indica thiamine auxotrophy. PhD thesis, University of Warwick.

Jiang, Yan (1993) Studies of the hydroxylase component of soluble methane monooxygenase from Methylococcus capsulatus (Bath). PhD thesis, University of Warwick.

Johnson, Moira A. (1988) Kinetics of RNA synthesis in rotavirus infected cells. PhD thesis, University of Warwick.

Johnson-Rollings, Ashley S. (2012) A polyphasic approach to the study of chitinolytic bacteria in soil. PhD thesis, University of Warwick.

Johnstone, Emma Lucy (2020) The impact of extreme weather events on soil microbial communities. PhD thesis, University of Warwick.

Jones, Bryn (2019) The application of scanning ion conductance microscopy to dental erosion and complex biological systems. PhD thesis, University of Warwick.

Jones, Ian Martin (1984) Plasmid segregational stability in 'Escherichia coli'. PhD thesis, University of Warwick.

Jones, Rebekah A. (2020) The role of membrane lipid remodelling in the antimicrobial resistance arsenal of Pseudomonas aeruginosa. PhD thesis, University of Warwick.

Justin, Pauline M. G. S. (1978) Physiology and biochemistry of the facultatively anaerobic chemolithotroph Thiobacillus denitrificans grown in chemostat culture. PhD thesis, University of Warwick.

Kallifidas, Dimitrios (2001) Horizontal gene transfer and evolution of antibiotic gene clusters. PhD thesis, University of Warwick.

Kanali, Anastasia (2021) Investigating the role of truncated receptors in plant immunity. PhD thesis, University of Warwick.

Karagouni, Amalia (1979) The physiology of the blue-green alga Anacystis nidulans grown in light- and carbon dioxide-limited continuous-flow culture. PhD thesis, University of Warwick.

Karakaya, Haydar (1995) Molecular genetic analysis of the zwf region of cyanobacterial genomes. PhD thesis, University of Warwick.

Karlikowska, Magdalena (2020) Investigation of carbohydrate transport and metabolism in mycobacteria. PhD thesis, University of Warwick.

Kaur, Amandeep (2019) Marine microbial interactions: who secretes what for which purpose. PhD thesis, University of Warwick.

Kelly, David Jacob (1985) The role of the intra-cytoplasmic membrane system in photosynthesis and differentiation in Rhodomicrobium vannielii. PhD thesis, University of Warwick.

Kemp, E. Helen (Elizabeth Helen) (1988) A study of the "ompT" gene of "Escherichia coli" K-12. PhD thesis, University of Warwick.

Khera, Tanya (2012) The diversity and distribution of Mycobacterium species in varying ecological and climatic environments. PhD thesis, University of Warwick.

Killen, Helen (1983) Biochemical and serological characterisation of a calf rotavirus. PhD thesis, University of Warwick.

King, Andrew Giuseppe (2014) Interactions between riverbed morphology, water chemistry and microbial diversity : and its impact on pollutant biodegradation. PhD thesis, University of Warwick.

Kulkarni, Anurag (2011) The role of VIF in overcoming the APOBEC3G block to HIV-1 replication. PhD thesis, University of Warwick.

Kumaresa, Deepak (2009) Molecular ecology of methanotrophs in a landfill cover soil. PhD thesis, University of Warwick.

Kuroki, Agnès (2019) Investigating the selectivity of sequence-controlled antimicrobial polymers synthesised by RAFT polymerisation. PhD thesis, University of Warwick.

Lack, Cameron (2021) Modelling the interactions between Mycobacterium tuberculosis and innate alveolar macrophages. PhD thesis, University of Warwick.

Lam, Jenna Hoi-Yan (2019) Condition-dependent transcriptional landscape of Campylobacter jejuni. PhD thesis, University of Warwick.

Lappin, Hilary Margaret (1984) Microbial degradation of the herbicide mecoprop by a rhizosphere community. PhD thesis, University of Warwick.

Laskaris, Paris (2009) Evolution of the streptomycin and viomycin biosynthetic clusters and resistance genes. PhD thesis, University of Warwick.

Lawrence, Anne C. (1978) Microbial diversity : a consequence of the aquatic environment. PhD thesis, University of Warwick.

Lea, Nicholas (1996) Processing and trafficking of Shiga-like toxin 1 in eukaryotic cells. PhD thesis, University of Warwick.

Lebens., Michael Richard (1983) The utilization of C[sub]14-C[sub]16 n-alkanes by microorganisms. PhD thesis, University of Warwick.

Leung, Yeung Shan Shandy (2018) Novel biopolymer constructs: physical properties and antimicrobial efficacy. PhD thesis, University of Warwick.

Lewis, Katharine Eleanor (2021) The role of lambs, time and space in persistence of Dichelobacter nodosus, the causative agent of footrot. PhD thesis, University of Warwick.

Lewis, Laura Ann (2012) Investigating the influence of phytopathogenic effectors upon host transcription. PhD thesis, University of Warwick.

Lim, Chae-Hong (1995) The effect of environmental factors on the physiology of aeromonas hydrophila in lake water. PhD thesis, University of Warwick.

Lim, Tzer Chyn (2020) Studies of cytokinesis in fission yeast protoplast. PhD thesis, University of Warwick.

Lipscombe, Martin John (1991) Construction and characterisation of "Escherichia coli" heat-labile toxin B-subunit fusion proteins. PhD thesis, University of Warwick.

Lones, Emma (2020) Analysis of the mechanism of recruitment of the helicase Sen1 at the replisome and its role in the maintenance of genomic stability. PhD thesis, University of Warwick.

Lougher, Matthew J. (2015) Functional and structural insights into MmyJ, An ArsR-like transcriptional repressor. PhD thesis, University of Warwick.

Lund, John (1983) The preparation and characterization of component C of 'Methylococcus capsulatus' (Bath). PhD thesis, University of Warwick.

MacDonald, Paul Richard (2018) Directed evolution of bacteriophage T7 receptor tropism. PhD thesis, University of Warwick.

MacLean, Martin Robert (1993) Autotrophy in iron-oxidizing, acidophilic bacteria. PhD thesis, University of Warwick.

Macdonald, Julie (1987) Studies on motility in Rhodomicrobium vannielii. PhD thesis, University of Warwick.

Mahapatra, Swati (2020) A multi-omics approach in the characterisation of the RNA-binding protein SpoVG in Bacillus subtilis. PhD thesis, University of Warwick.

Marlow, Victoria A. (2013) Mechanistic studies of acetolactate decarboxylase. PhD thesis, University of Warwick.

Marsh, Peter (1993) Interactions between actinophage and streptomycetes in soil and the fate of phage-borne genes. PhD thesis, University of Warwick.

Marshall, Rowena Margaret (1985) Thermophilic acidophilic bacteria: iron, sulphur and mineral oxidation. PhD thesis, University of Warwick.

Martino, Angela (2013) A new serogroup B meningococcal vaccine : biophysical characterisation of its protein components. PhD thesis, University of Warwick.

Maskew, Kathryn S (2019) Dissection of the molecular mechanisms underpinning the threat posed by antibiotic resistance of MRSA. PhD thesis, University of Warwick.

Mason, Julie (1986) Microbial growth and the oxidation of inorganic sulphur compounds. PhD thesis, University of Warwick.

Matejtschuk, Paul (1986) Structure and ligand-binding properties of abnormal human albumins. PhD thesis, University of Warwick.

Matos, Cristina F. R. O. (2010) Tat-mediated quality control in Escherichia coli. PhD thesis, University of Warwick.

Matthews, J. A. (1980) In vitro-synthesis of barley storage proteins. PhD thesis, University of Warwick.

May, James Paul (2001) Characterisation of the slr1212 genomic region of the freshwater cyanobacterium Synechocystis sp. PCC 6803. PhD thesis, University of Warwick.

McDowell, David Gordon (1990) A study of plasmid biology in Bacillus thuringiensis subspecies kurstaki HD1-Dipel. PhD thesis, University of Warwick.

McEldowney, Sharron (1984) Attachment of freshwater bacteria to solid surfaces. PhD thesis, University of Warwick.

McFeely, Daniel (2019) The role of the N-glycolyl modification in Mycobacterial peptidoglycan synthesis and survival. PhD thesis, University of Warwick.

McGowan, Simon James (1992) Further genetic studies of the carQRS region of Myxococcus xanthus. PhD thesis, University of Warwick.

McGowan, Veronica (1992) Detection, isolation and characterization of marine methanotrophs. PhD thesis, University of Warwick.

McGurl, Barry Francis (1986) Purification and characterisation of putative protein allergens from the seeds of the castor oil plant, "Ricinus communis". PhD thesis, University of Warwick.

Melegaro, Alessia (2005) Epidemiology, mathematical modelling and economics of Streptococcus pneumoniae : assessing the potential impact of vaccination. PhD thesis, University of Warwick.

Micelli, Carmina (2019) Structures and ligand interactions of penicillin binding proteins in gram-negative bacteria. PhD thesis, University of Warwick.

Michniewski, Slawomir (2020) Phages infecting marine Vibrios: prevalence, diversity and role in the dissemination of antibiotic resistance genes. PhD thesis, University of Warwick.

Mihdhir, Alaa (1993) The physiology, biochemistry and genetics of propane metabolism in Rhodococcus rhodochrous PNKb1. PhD thesis, University of Warwick.

Mikhaylina, Alevtina (2019) Zinc regulation in an open ocean cyanobacterium. PhD thesis, University of Warwick.

Millar, Alan L. (1998) The mass spectrometry of selected proteins and peptides. PhD thesis, University of Warwick.

Mitchell, Daniel E. (2015) The rational design and applications of synthetic antifreeze protein mimics. PhD thesis, University of Warwick.

Mohamad, Ahmad Johari (2019) The influence of metallic surface topography towards adhesion of gram-positive & gram-negative bacteria. PhD thesis, University of Warwick.

Monaghan, Ellis Beltrami (2021) Rhizosphere microbiome assembly and function in the Brassicaceae. PhD thesis, University of Warwick.

Mook, Piers A. N. (2012) Redefining the population at risk of listeriosis in England and Wales. PhD thesis, University of Warwick.

Morgan, Eric (2003) The dynamics of parasite transmission between the saiga antelope and domestic livestock in Kazakhstan. PhD thesis, University of Warwick.

Morgan, Philip (1985) Morphological and physiological adaptations of prosthecate bacteria to growth in low nutrient environments. PhD thesis, University of Warwick.

Mottley, J. (John) (1976) Studies of energy conservation in Chlamydomonas reinhardii. PhD thesis, University of Warwick.

Moyse, Harold Arthur James (2018) A mathematical approach to identifying antibody affinity with modern biosensors, for pharmaceutical and clinical settings. PhD thesis, University of Warwick.

Møller-Olsen, Christian (2021) Investigation of the molecular and cellular mechanisms of in vitro phage therapy in human cells and the innate immune response against Escherichia coli K1 and bacteriophage K1F. PhD thesis, University of Warwick.

Naish, Matthew (2018) Control of developmental reprogramming during somatic cell regeneration in Arabidopsis thaliana. PhD thesis, University of Warwick.

Nakou, Ioanna (2021) Discovery and biosynthesis of gladiostatin : a novel glutarimide antibiotic from Burkholderia gladioli. PhD thesis, University of Warwick.

Natale, Alessandra Pia (2010) Genotypic and phenotypic flexibility of microbial communities. PhD thesis, University of Warwick.

Nazaries, Loïc (2011) Impact of land-use changes on the methanotrophic community structure. PhD thesis, University of Warwick.

Needham, James (2009) Analysis of a putative crtW gene of Myxococcus xanthus. PhD thesis, University of Warwick.

Neilson, James (1991) Attachment of bacteria to glass surfaces in pure culture and in mixed suspensions and the effect of growth conditions on that attachment. PhD thesis, University of Warwick.

Nev, Olga (2017) Regulation of nutrient uptake, substrate conversion, and bio-production in micro-organisms. PhD thesis, University of Warwick.

Newman, Amy Laura (2020) Getting to the root of the issue : characterising plant-microbial circadian interactions in the rhizosphere microbiome. PhD thesis, University of Warwick.

Newman, Hector (2021) Biophysical and biochemical studies of penicillin binding proteins and novel PBP3 inhibitors. PhD thesis, University of Warwick.

Nilsson Lock, Gun Antonia Evelina (2011) Mutational and computational characterization of transmembrane domains in the fungal G protein-coupled pheromone receptors STE2 and Mam2. PhD thesis, University of Warwick.

Nippe, Olivia M. (2019) Identification and characterisation of microbial effectors interfering with the plant circadian rhythm. PhD thesis, University of Warwick.

Noakes, Karen (1999) Exploiting the retrograde transport of disarmed toxins for the delivery of exogenous antigens into MHC class 1 presentation pathway. PhD thesis, University of Warwick.

O'Connell, Nuala H. (2003) A study of Clostridium difficile in biofilm mode of growth using the Sorbarod filter system. MD thesis, University of Warwick.

O'Grady, Christopher James (2019) The structure and function of microbial communities at the soil-atmosphere interface. PhD thesis, University of Warwick.

O'Neill, Colette (2010) Antibiotic-resistant staphylococci in the agricultural environment : reservoirs of resistance and infection. PhD thesis, University of Warwick.

O'Reilly, Amy (2017) Assay development towards the characterisation of the bifunctional activity of P. aeruginosa and E. coli Class A PBPs. PhD thesis, University of Warwick.

Oakley, Christopher John (1986) Ribosome synthesis during the cell cycle of "Rhodomicrobium vannielii". PhD thesis, University of Warwick.

Okechukwu, Emeka Chibuzor (2019) Understanding the roles of beneficial microbe effectors in plant growth and stress resistance. PhD thesis, University of Warwick.

Osborne, Rory (2019) Uncovering the role of Serendipita indica effectors in enhancing host disease resistance. PhD thesis, University of Warwick.

Palmer, Jessica Louise (2019) The degradation of atmospheric pollutants by phyllosphere microbiota. PhD thesis, University of Warwick.

Pang, Fang (2022) Enzymology of gladiolin and gladiostatin biosynthesis in Burkholderia gladioli. PhD thesis, University of Warwick.

Pardal Bermejo, Alonso Javier (2017) Exploring the role of histone marks and chromatin remodelling ATPases in plant immunity. PhD thesis, University of Warwick.

Parker, Hadyn Luke (2021) Tools to explore carbohydrate metabolism pathways in Mycobacteria. PhD thesis, University of Warwick.

Parrott, Linda M. (1980) The effects of environmental conditions on the growth, physiology and ultrastructure of the cyanobacterium Anacystis nidulans. PhD thesis, University of Warwick.

Patel, Kirti Kantilal (2001) Biophysical studies on novel metallo-systems and their interactions with DNA and small molecules. PhD thesis, University of Warwick.

Patel, Nisha A. (2012) The use of recently developed mass spectrometry-based proteomic approaches for the study of methylocella silvestris BL2. PhD thesis, University of Warwick.

Patel, Prakash (2009) Investigations of Streptomyces coelicolor A3(2) siderophore binding proteins. PhD thesis, University of Warwick.

Patel, Roshani (2014) Twin arginine translocase (Tat) : structural and functional insight. PhD thesis, University of Warwick.

Pearman, John K. (2012) Molecular ecology and transcriptomics of marine photosynthetic picoeukaryotes. PhD thesis, University of Warwick.

Perez-Sepulveda, Blanca (2015) Molecular basis of cyanophage resistance in marine Synechococcus. PhD thesis, University of Warwick.

Phillips, Daniel J. (2014) Biochemically adaptive materials based on (Iso)thermally-responsive polymers. PhD thesis, University of Warwick.

Phillips, Lesley (1992) The distribution of phenotypic and genotypic characters within streptomycetes and their relationship to antibiotic production. PhD thesis, University of Warwick.

Pilkington, S. J. (1986) The soluble methane monooxygenase and ammonia oxidation in the obligate methanotroph "Methylosinus trichosporium (OB3b)". PhD thesis, University of Warwick.

Piper, Jason (2014) The demarcation of transcription factor binding sites through the analysis of DNase-seq data. PhD thesis, University of Warwick.

Pitt, Frances Diana (2010) Functional characterisation of the pst1 and pst2 gene clusters in Synechocystis sp. PCC6803. PhD thesis, University of Warwick.

Poon, Vincent (2015) Analysis and exploitation of AHFCA-dependent signalling systems in Streptomyces bacteria. PhD thesis, University of Warwick.

Potts, Linda Elizabeth (1980) Structure of the R. vannielii genome. PhD thesis, University of Warwick.

Powell, Siân Mari (2019) Environmental reservoirs of bovine tuberculosis in the European badger (Meles meles). PhD thesis, University of Warwick.

Prakash, Satya (2018) De novo engineering of trans-activating riboswitches in E. coli. PhD thesis, University of Warwick.

Prasongpholchai, Panward (2021) Investigation of a cryptic polyketide biosynthetic pathway from Rhodococcus erythropolis PR4. PhD thesis, University of Warwick.

Price, Jonathan Lewis (2018) Insights into doubled haploid breeding programs from a genome-wide transcriptome and methylome analysis of Brassica oleracea. PhD thesis, University of Warwick.

Pringle, James Howard (1984) The role of bacterial surface polymers in the adhesion of freshwater bacteria to solid surfaces. PhD thesis, University of Warwick.

Prior, Bernadette M. (1985) Production and characterization of monoclonal antibodies to tissue culture adapted calf rotavirus (UK-Compton strain). PhD thesis, University of Warwick.

Prior, Stephen David (1985) The effect of copper ions on methane oxidation by the obligate methylotroph 'Methylococcus capsulatus' (Bath). PhD thesis, University of Warwick.

Prosser, Naomi S. (2019) The prevalence of lameness and diversity of serogroups of Dichelobacter nodosus in sheep in England. PhD thesis, University of Warwick.

Quigley, Andrew Michael (2010) The two-component system controlling inducible glycopeptide resistance in Enterococci. PhD thesis, University of Warwick.

Rahman, M. Tanvir (2010) Molecular ecology of facultative methanotrophs. PhD thesis, University of Warwick.

Randhawa, J. S. (Jaspal Singh) (1993) Molecular characterisation of the pneumonia virus of mice glycoprotein genes. PhD thesis, University of Warwick.

Rangama, Marie Séverine (2020) Characterisation of a subset of Escherichia coli river isolates and their role in the environmental resistome. PhD thesis, University of Warwick.

Ransom, Elspeth M. (2018) Elucidating key components of the Lactuca sativa and Sclerotinia plant-pathogen interaction. PhD thesis, University of Warwick.

Ratamero, Erick Martins (2017) Bacterial inner membrane remodelling by force generation of FtsZ fibres. PhD thesis, University of Warwick.

Redgwell, Tamsin (2019) Microbial ‘parasites’ meet climate change: marine cyanobacteria as viral puppets. PhD thesis, University of Warwick.

Reeves, Philip J., 1964- (1991) Molecular genetic analysis of extracellular enzyme secretion by Erwinia carotovora. PhD thesis, University of Warwick.

Ren, Chao, Ph.D. (2011) The twin arginine translocation pathway in Escherichia coli : mechanism and quality control. PhD thesis, University of Warwick.

Richards, Sarah-Jane (2014) Glycosylated nanomaterials : neutralisation and detection of bacteria and toxins. PhD thesis, University of Warwick.

Rigg, Richard James (1987) Neutralisation of influenza virus : evidence that neutralisation by IgG is the result of incomplete uncoating rather than a reduction in the virion transcriptase activity. PhD thesis, University of Warwick.

Rihtman, Branko (2016) Viral infection of marine picoplankton under nutrient depletion conditions : pseudolysogeny and magic spot nucleotides. PhD thesis, University of Warwick.

Robertson, Fiona E. (1996) Starvation-survival in Escherichia coli. PhD thesis, University of Warwick.

Robson, Paul R. H. (1991) Towards the mechanism of carotenogenesis in Myxococcus xanthus. PhD thesis, University of Warwick.

Robson, William Nigel (1993) Physiological and genetic studies of deoxynojirimycin production in streptomyces species. PhD thesis, University of Warwick.

Rodolis, Maria T. (2013) Interaction of translocase MraY with the antibacterial E protein from bacteriophage ΦX174. PhD thesis, University of Warwick.

Romero-Zepeda, Hilda (1999) The influence of ribosomal proteins on the action of ribosome-inactivating proteins. PhD thesis, University of Warwick.

Ronson, Clive William (1979) Genetic and physiological studies on Rhizobium trifolii. PhD thesis, University of Warwick.

Ross, Frederick Patrick (1975) Studies in sterol biosynthesis : an investigation into the mode of cyclization of squalene during conversion in vivo to cholesterol. PhD thesis, University of Warwick.

Rowland, Catherine Emily (2019) Towards a mechanistic understanding of PBP-mediated beta-lactam resistance in Streptococcus pneumoniae. PhD thesis, University of Warwick.

Roy, Proyash (2021) The influence of the plant circadian clock on nodulation in Medicago truncatula. PhD thesis, University of Warwick.

Russell, George Cameron (1984) Inverted repeat sequences in the genome of 'Rhodomicrobium vannielii'. PhD thesis, University of Warwick.

Rutter, Gil (2015) Coarse-grained simulations of intrinsically disordered peptides. PhD thesis, University of Warwick.

Salmond, George (1979) A study of virus-host interactions in the genus Rhizobium. PhD thesis, University of Warwick.

Sanders, Rhiannon (1986) Segregational stability of plasmids in Bacillus subtilis. PhD thesis, University of Warwick.

Sandhu, Sandeep (2010) Development of an antibody-based assay for methicillin resistant Staphylococcus aureus using synthetic peptidoglycan precursors. PhD thesis, University of Warwick.

Sanghera, Narinder (2001) The interaction of the prion protein with lipid membranes and implications for prion conversion. PhD thesis, University of Warwick.

Sani, Alhassan (1985) Ribulose-1.5-bisphosphate carboxylase-oxygenase and carbon dioxide fixation in the 'rhodospirillaceae'. PhD thesis, University of Warwick.

Sargeant, Jacob R. (2021) A biosynthetic engineering approach to structural diversification of the enacyloxins. PhD thesis, University of Warwick.

Sargeant, Stephanie L. (2013) Microbial utilisation of methanol in seawater. PhD thesis, University of Warwick.

Sazinas, Pavelas (2016) The application of high-throughput sequencing to study the genome composition and transcriptional response of Haemophilus influenzae. PhD thesis, University of Warwick.

Scanlan, David J. (1988) Biochemical and molecular genetic approaches to studying protein export by cyanobacteria. PhD thesis, University of Warwick.

Schwarzentruber, Patrick (2003) Microbiological characterisation of white pigment slurries : a strategy for bacteria management. PhD thesis, University of Warwick.

Sergaki, Chrysi (2019) The effect of beneficial microbes on plant fitness and microbiome – an integrated approach. PhD thesis, University of Warwick.

Serrano, Eduardo Goicoechea (2019) Development of phage-assisted evolution and riboregulation strategies. PhD thesis, University of Warwick.

Sheldon, Rachel E. (2014) The role of gap junctions in the excitability of the myometrial smooth muscle network. PhD thesis, University of Warwick.

Shepherd, Jennifer (2011) Characterisation of pneumococcal peptidoglycan cross-linking enzymology. PhD thesis, University of Warwick.

Shuttleworth, Helen L. (1991) Studies on the expression of a cloned Staphylococcus aureus protein A gene in Escherichia coli. PhD thesis, University of Warwick.

Sidda, John D. (2015) Discovery and biosynthesis of novel natural products from Streptomyces venezuelae. PhD thesis, University of Warwick.

Sillett, Nicholas (2019) Exploring the roles of the C-terminal of Pol2, the catalytic subunit of DNA Polymerase ɛ, in replication and checkpoint response. PhD thesis, University of Warwick.

Silvano, Eleonora (2021) Uncovering the biosynthetic pathway and function of unusual aminolipids found in the marine heterotrophic bacterium Ruegeria Pomeroyi. PhD thesis, University of Warwick.

Simmons, Hilary (1988) Establishment and analysis of bacterial biofilm subjected to fluid flow under varying nutrient conditions. PhD thesis, University of Warwick.

Simmons, Susan (2001) The microbial ecology of acidic environments. PhD thesis, University of Warwick.

Simpson, Helen D. (1987) The metabolism of toluene by thermotolerant bacteria. PhD thesis, University of Warwick.

Singh, Gurdamanjit (2021) A combinatorial assembly strategy to optimise biodegradation pathway performance in yeast. PhD thesis, University of Warwick.

Slater, Ross T. (2018) Characterising the role of LuxS during the biofilm formation of Clostridioides difficile. PhD thesis, University of Warwick.

Sleeman, Katrina (2003) Identification of proteins interacting with the polymerase (L) protein of rinderpest virus. PhD thesis, University of Warwick.

Smart, Katie (2019) Functional characterisation of the activities and interactions of Gram-negative penicillin-binding proteins PBP1b and PBP3. PhD thesis, University of Warwick.

Smith, Alastair F. (2017) How do marine bacteria respond to nutrient limitation?: a lipidomics approach. PhD thesis, University of Warwick.

Smith, Christopher A. (2016) Kinetochore dynamics and their attachment to the mitotic spindle. PhD thesis, University of Warwick.

Smith, Neil A. (1988) Metabolism of dimethyl disulphide, carbon disulphide and other volatile sulphur compounds by chemolithoautotrophic sulphur bacteria. PhD thesis, University of Warwick.

Smith, Sarah Marie (2015) An investigation into the structure and localisation of the bacterial twin arginine translocase (Tat) complexes by electron microscopy. PhD thesis, University of Warwick.

Sotenko, Maria V. (2010) Bicatalytic conversion of glycerol to value-added products. PhD thesis, University of Warwick.

Sousoni, Despoina (2018) Marine phototroph-heterotroph interactions. PhD thesis, University of Warwick.

Spenceley, Hazel (1993) Bacterial attachment and biofilm development. PhD thesis, University of Warwick.

Stafford, Graham P. (2002) Regulation of methane monooxygenase genes in methanotrophs. PhD thesis, University of Warwick.

Stanley, Stephen Hall (1977) A study of the physiology and gas limited growth of Methylococcus capsulatus. PhD thesis, University of Warwick.

Stephens, Gillian Mary (1983) The metabolism of gaseous n-alkanes by bacteria. PhD thesis, University of Warwick.

Stephenson, Jason (2014) Methanotrophy in Movile Cave. PhD thesis, University of Warwick.

Stirling, David Ian (1978) Oxidation of carbon compounds by Methylococcus capsulatus. PhD thesis, University of Warwick.

Stoakes, Emily Anne (2017) Campylobacter jejuni: deciphering the role of F1hF in flagellar biogenesis. PhD thesis, University of Warwick.

Strachan, Fiona Rachel (1986) The autonomy and function of eukaryotic signal sequences : segregation of variants of preprochymosin and prelysozyme in "Xenopus oocytes" and "in vitro". PhD thesis, University of Warwick.

Styles, Kathryn (2016) Investigating interactions between methylenomycin furan microbial hormones and transcriptional repressors in Streptomyces coelicolor. PhD thesis, University of Warwick.

Summerfield, Andrew (2009) Role of co-factor biosynthesis in Listeria monocytogenes virulence. PhD thesis, University of Warwick.

Suzuki, Motoshi (1988) Development of a process for the production of propylene oxide in methane-oxidising bacteria. PhD thesis, University of Warwick.

Tanaka, Joji (2018) Polymeric arsenicals as a platform for functional biomaterials. PhD thesis, University of Warwick.

Tate, Stephen A. (1996) The modifier protein of formaldehyde dehydrogenase from Methylococcus capsulatus (Bath). PhD thesis, University of Warwick.

Taylor, Paul Phillip (1986) The cloning and expression of amylolytic genes in "Escherichia coli" and their role in starch utilization. PhD thesis, University of Warwick.

Taylor, Stephen Colin (1979) Ribulose 1,5-bisphosphate carboxylase and carbon dioxide fixation in Rhodomicrobium vannielii (RM5) and Methylococcus capsulatus (Bath). PhD thesis, University of Warwick.

Tetlow, Mary Louise (2015) The role of pathogen effector proteins in altering host plant transcription. PhD thesis, University of Warwick.

Thomson, Nicholas Robert (1996) Co-ordinate regulation of antibiotic and pigment production by the Serratia Rap protein : evidence for a novel family of regulatory proteins. PhD thesis, University of Warwick.

Thoroughgood, Christopher W. (2018) Functional and structural studies of an Enterococcal Serine/Threonine kinase and its contribution to antibiotic resistance mechanisms. PhD thesis, University of Warwick.

Trahearn, Nicholas (2017) Registration and multi-immunohistochemical analysis of whole slide images of serial tissue sections. PhD thesis, University of Warwick.

Tsai, Jeng-Wen (1996) Protein phosphorylation in cyanobacterial light-harvesting complexes. PhD thesis, University of Warwick.

Turner, Andrew Michael (1987) Protein phosphorylation in "Rhodomicrobium vannielii". PhD thesis, University of Warwick.

Tut, Gokhan (2018) On the microtubule-based transport of Marek’s Disease Virus. PhD thesis, University of Warwick.

Tételin, Stéphanie (2008) An analysis of wnt signalling molecules in Xenopus pronephros development. PhD thesis, University of Warwick.

Urabi, Iftikhar (1993) Virulence factors of verotoxin-producing Escherichia coli O157:H7. PhD thesis, University of Warwick.

Venables, Neil A. (2015) The electrostatic analysis of TOG-domains from XMAP215/DIS1 family members. PhD thesis, University of Warwick.

Wang, Tongtong (2016) Resistance to Turnip mosaic virus (TuMV) in Brassica juncea and introgression of resistance from Brassica rapa, Brassica napus and Brassica nigra into Brassica juncea. PhD thesis, University of Warwick.

Warmington, Rachel Julie (2014) Pathogen diversity, epidemiology and control of sclerotinia disease in vegetable crops. PhD thesis, University of Warwick.

Warren, Gemma Zara Louise (2009) The twin arginine translocase pathway : a functional and structural study in Escherichia coli and Synechocystis sp. PCC6803. PhD thesis, University of Warwick.

Waters, Barry Williams (1982) Mechanistic aspects of the monooxygenase system from Methylococcus capsulatus. PhD thesis, University of Warwick.

Watkins, Gemma L. (2012) A comparison of HIV-1 and HIV-2 gag gene expression. PhD thesis, University of Warwick.

Watts, Joy E. M. (1998) Analysis of microbial diversity in polluted and non-polluted soils : a comparison of genetic, functional and culture based techniques. PhD thesis, University of Warwick.

Westmacott, Donald (1976) Rhodopseudomonas palustris : a model of bacterial differentiation. PhD thesis, University of Warwick.

Whalley, Peter (1987) The proteolytic and saccharolytic activity of some natural waters and their associated bacteria. PhD thesis, University of Warwick.

Wharam, Susan Deborah (1992) The Molecular and genetic characterization of the secretory apparatus of Erwinia Carotovora subsp. Carotovora. PhD thesis, University of Warwick.

Williams, Simon (2013) Microbial ecology of anammox bacteria in estuarine and oxygen minimum zone environments. PhD thesis, University of Warwick.

Williams, Timothy David (1995) Aspects of lithoautotrophy in iron-oxidizing thermoacidophilic archaea. PhD thesis, University of Warwick.

Willis, Zoë (2019) The epidemiology of ovine footrot and virulence and phylogeny of Dichelobacter nodosus in a single flock and globally. PhD thesis, University of Warwick.

Witcomb, Luci (2012) The in situ analysis of the microbial community associated with footrot of sheep. PhD thesis, University of Warwick.

Wood, John N. C. (1976) Polynucleotide phosphorylases from thermophiles. PhD thesis, University of Warwick.

Wood, Katherine M. (2021) The role of adaptor proteins in the dynamics of clathrin coat disassembly. PhD thesis, University of Warwick.

Woodman, Andrew (2015) The contribution of the RNA dependent RNA polymerase to genetic recombination in enteroviruses. PhD thesis, University of Warwick.

Woods, Nigel R. (1988) The bacterial metabolism of propane. PhD thesis, University of Warwick.

Woolven-Allen, John (2008) An investigation into the potential impacts of ocean acidification and ocean fertilisation on the genetic diversity of marine bacterial assemblages. PhD thesis, University of Warwick.

Wormleaton, Sally Louise (2000) Molecular and biological studies of fast and slow killing granuloviruses. PhD thesis, University of Warwick.

Wright, Emma, (Researcher in life sciences) (2013) The effect of pathogens on honeybee learning and foraging behaviour. PhD thesis, University of Warwick.

Wright, Jordan (2010) The role of PML proteins in adenovirus type 5 infection and the type I interferon response. PhD thesis, University of Warwick.

Wright, Robyn Joanna (2019) Food or just a free ride? : exploring marine microbial community dynamics on natural and synthetic polymers. PhD thesis, University of Warwick.

Yaxley, Alice M. (2009) Study of the complete genome sequence of Streptomyces scabies (or scabiei) 87.22. PhD thesis, University of Warwick.

York, Anna (2019) A novel linkage between maintenance of protein translational fidelity and cell wall biosynthesis in Streptococcus pneumoniae. PhD thesis, University of Warwick.

Young, Jamie Stuart (2003) Molecular detection of Mycobacterium bovis in the environment. PhD thesis, University of Warwick.

Zadjelovic Varas, Vinko J. (2019) Characterisation of the marine bacterium alcanivorax sp. 24 : enzymatic potential to degrade natural and synthetic polymers. PhD thesis, University of Warwick.

Zanzu, Serena (2020) Humans, microbes and soils: a multi-sited ethnography. PhD thesis, University of Warwick.

Zhu, Yijun (2016) Genetics and molecular mechanism of trimethylamine N-oxide demethylase of Methylocella silvestris BL2. PhD thesis, University of Warwick.

dos Santos Rodrigues, Fábio Henrique (2018) Targeting trypanosomatid translation factor interactions. PhD thesis, University of Warwick.

Dataset

Achtman, M., Zhou, Zhemin, Charlesworth, Jane and Baxter, Laura (2022) Data for EnteroBase: Hierarchical clustering of 100,000 s of bacterial genomes into species/sub-species and populations. [Dataset]

(2015) Data for Molecular analysis of asymptomatic Bacteriuria Escherichia coli strain VR50 reveals adaptation to the urinary tract by gene acquisition. [Dataset]

Davies, Gemma L. and Ternent, Lucy (2016) Data for Heparin stabilised iron oxide for MR applications: a relaxometric study. [Dataset]

Gibson, Matthew I. and Tomás, Ruben M. F. (2019) Data for Optimization and stability of cell–polymer hybrids obtained by “clicking” synthetic polymers to metabolically labeled cell surface glycans. [Dataset]

Habershon, Scott and Baker, Lewis A. Data for Photosynthetic pigment-protein complexes as highly-connected networks : implications for robust energy transport. [Dataset]

Hasan, Muhammad, Fayter, Alice E. R. and Gibson, Matthew I. (2018) Data for Ice recrystallization inhibiting polymers enable glycerol-free cryopreservation of microorganisms. [Dataset]

Lockey, Christine, Edwards, Richard J., Roper, David I. and Dixon, Ann M. (2020) Data for The extracellular domain of two-component system sensor kinase VanS from streptomyces coelicolor binds Vancomycin at a newly identified binding site. [Dataset]

Lockey, Christine, Young, Hannah, Brown, Jessica and Dixon, Ann M. (2022) Data for Characterization of interactions within the Igα/Igβ transmembrane domains of the human B-cell receptor provides insights into receptor assembly. [Dataset]

Marton, Huba L., Styles, Kathryn, Kilbride, Peter, Sagona, Antonia P. and Gibson, Matthew I. (2021) Data for Polymer-mediated cryopreservation of bacteriophages. [Dataset]

Richards, Sarah-Jane, Baker, Alexander, Walker, Marc and Gibson, Matthew I. (2020) Data for Polymer-stabilized sialylated nanoparticles : synthesis, optimization, and differential binding to influenza hemagglutinins. [Dataset]

Tomás, Ruben M. F. and Gibson, Matthew I. (2021) Data for Covalent cell surface recruitment of chemotherapeutic polymers enhances selectivity and activity. [Dataset]

Zhou, Zhemin, Alikhan, Nabil-Fareed, Mohamed, Khaled, Fan, Yulei and Achtman, Mark (2019) Data for The user’s guide to comparative genomics with EnteroBase. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica. Archive package of additional figures, tables and data. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: Concoct 1. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: Concoct 2. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: Concoct 3. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: Concoct 4. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: Concoct 5. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: Concoct 6. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: Concoct 7. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: Concoct 8. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: ParaC Pan-genome 1. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: ParaC Pan-genome 2. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: ParaC Pan-genome 3. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: ParaC Pan-genome 4. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: ParaC Pan-genome 5. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: ParaC Pan-genome 6. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: ParaC Pan-genome 7. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: ParaC Pan-genome 8. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: ParaC genome SNPs 1. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: ParaC genome SNPs 2. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: ParaC genome SNPs 3. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: ParaC genome SNPs 4. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: Salmonella supertree 1. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: Salmonella supertree 2. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: Salmonella supertree 3. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: ancestral reconstruction 1. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: ancestral reconstruction 2. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: date estimation 1. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: date estimation 2. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: date estimation 3. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: date estimation 4. [Dataset]

Zhou, Zhemin, Lundstrøm, Inge, Dien, Alicia Tran, Duchêne, Sebastián, Alikhan, Nabil-Fareed, Sergeant, Martin J., Langridge, Gemma, Fotakis, Anna K., Nair, Satheesh, Stenøien, Hans K., Hamre, Stian S., Casjens, Sherwood, Quince, Christopher , Christophersen, Axel, Thomson, Nicholas R., Weill, François-Xavier, Ho, Simon, Gilbert, M. Thomas P. and Achtman, Mark (2018) Data for Millennia of genomic stability within the invasive Para C Lineage of Salmonella enterica: workflow. [Dataset]

Zhu, Chongyu, Schneider, Elena K., Nikolaou, Vasiliki, Klein, Tobias, Li, Jian, Davis, Thomas P., Whittaker, Michael R., Wilson, Paul, Kempe, Kristian, Velkov, Tony and Haddleton, David M. (2017) Data for Hydrolyzable poly[poly(ethylene glycol) methyl ether acrylate]–colistin prodrugs through copper-mediated photoinduced living radical polymerization. [Dataset]

Zhu, Chongyu, Schneider, Elena K., Wang, Jiping, Kempe, Kristian, Wilson, Paul, Velkov, Tony, Li, Jian, Davis, Thomas P., Whittaker, Michael R. and Haddleton, David M. (2017) Data for A traceless reversible polymeric colistin prodrug to combat multidrug-resistant (MDR) gram-negative bacteria. [Dataset]

Öster, Carl, Walkowiak, Grzegorz P., Hughes, Dallas E., Spoering, Amy L., Peoples, Aaron J., Catherwood, Anita C., Tod, Julie A., Lloyd, Adrian J., Herrmann, Torsten, Lewis, Kim, Dowson, Christopher G. and Lewandowski, Józef R. (2018) Data for Structural studies suggest aggregation as one of the modes of action for teixobactin. [Dataset]