Journal Article

Abuhammad, Areej, Fullam, Elizabeth, Bhakta, Sanjib, Russell, Angela, Morris, Garrett, Finn, Paul and Sim, Edith (2014) Exploration of piperidinols as potential antitubercular agents. Molecules, Volume 19 (Number 10). pp. 16274-16290. doi:10.3390/molecules191016274

Adetifa, Ifedayo M.O., Bwanaali, Tahreni, Wafula, Jackline, Mutuku, Alex, Karia, Boniface, Makumi, Anne, Mwatsuma, Pauline, Bauni, Evasius, Hammitt, Laura L., Nokes, D. James, Maree, Ephantus, Tabu, Collins, Kamau, Tatu, Mataza, Christine, Williams, Thomas N. and Scott, J. Anthony G. (2017) Cohort profile : the Kilifi vaccine monitoring study. International Journal of Epidemiology, 46 (3). 792-792h. doi:10.1093/ije/dyw202

Agoti, Charles N., Mwihuri, Alexander G., Sande, Charles J., Onyango, Clayton O., Medley, Graham, Cane, Patricia and Nokes, D. James (2012) Genetic relatedness of infecting and reinfecting respiratory syncytial virus strains identified in a birth cohort from rural Kenya. Journal of Infectious Diseases, Volume 206 (Number 10). pp. 1532-1541. doi:10.1093/infdis/jis570

Ahmed, Usman, Anwar, Attia, Savage, Richard S., Costa, Matthew L., Mackay, N., Filer, Andrew, Raza, Karim, Watts, Richard, Winyard, P. G., Haigh, R. C., Thornalley, Paul J. and Rabbani, Naila (2015) Biomarker combination detects early-stage and discriminates osteoarthritis, rheumatoid arthritis and other inflammatory joint disease. Scientific Reports (5). L9259. doi:10.1038/srep09259

Bevington, S. L., Cauchy, P., Piper, Jason, Bertrand, E., Lalli, N, Jarvis, R. C., Gilding, L. N., Ott, Sascha, Bonifer, C. and Cockerill, P. N. (2016) Inducible chromatin priming is associated with the establishment of immunological memory in T cells. The EMBO Journal, 35 (5). pp. 515-535. doi:doi:10.15252/embj.201592534

Black, Andrew J., House, Thomas A., Keeling, Matthew James and Ross, Joshua V. (2013) Epidemiological consequences of household-based antiviral prophylaxis for pandemic influenza. Journal of Royal Society. Interface, Volume 10 (Number 81). Article no. 20121019. doi:10.1098/rsif.2012.1019

Black, Andrew J., House, Thomas A., Keeling, Matthew James and Ross, Joshua V. (2014) The effect of clumped population structure on the variability of spreading dynamics. Journal of Theoretical Biology, Volume 359 . pp. 45-53. doi:10.1016/j.jtbi.2014.05.042

Calvez, Philippe, Breukink, Eefjan, Roper, David I., Dib, Mélanie, Contreras-Martel, Carlos and Zapun, André (2017) Substitutions in PBP2b from β-lactam resistant Streptococcus pneumoniae have different effects on enzymatic activity and drug reactivity. Journal of Biological Chemistry, 292 (7). pp. 2854-2865. doi: 10.1074/jbc.M116.764696

Chapman, James D., Chappell, M. J. (Michael J.) and Evans, Neil D. (2011) The use of a formal sensitivity analysis on epidemic models with immune protection from maternally acquired antibodies. Computer Methods and Programs in Biomedicine, Vol.104 (No.2). pp. 37-49. doi:10.1016/j.cmpb.2010.08.019

Chen, Yixiang, Wright, Jordan L., Meng, Xueqiong and Leppard, Keith (2015) Promyelocytic leukemia protein isoform II promotes transcription factor recruitment to activate interferon β and interferon-responsive gene expression. Molecular and Cellular Biology, Volume 35 (Number 10). pp. 1660-1672. doi:10.1128/MCB.01478-14

Daga, Sunil, Moyse, Harry, Briggs, David, Lowe, David Philip, Evans, Neil D., Jones, James, Buchli, Rico, McMurtrey, Curtis, Mulder, Arend, Hildebrand, William, Claas, Frans, Higgins, Rob, Mitchell, Daniel A. and Zehnder, Daniel (2018) Direct quantitative measurement of the kinetics of HLA-specific antibody interactions with isolated HLA proteins. Human Immunology, 79 (2). pp. 122-128. doi:10.1016/j.humimm.2017.10.012

Davenport, Rebecca, Heawood, Christopher, Sessford, Kate, Baker, Melissa, Baiker, Kerstin, Blacklaws, Barbara, Kaler, Jasmeet, Green, Laura E. and Tötemeyer, Sabine (2014) Differential expression of Toll-like receptors and inflammatory cytokines in ovine interdigital dermatitis and footrot. Veterinary Immunology and Immunopathology, Volume 161 (Number 1–2). pp. 90-98. doi:10.1016/j.vetimm.2014.07.007

Dockree, Tamsin, Holland, Christopher J., Clement, Mathew, Ladell, Kristin, McLaren, James E., Berg, Hugo van den, Gostick, Emma, L. Miners, Kelly, Llewellyn-Lacey, Sian, S Bridgeman, John, Man, Stephen, Bailey, Mick, Burrows, Scott R., Price, David A. and Wooldridge, Linda (2017) CD8+ T-cell specificity is compromised at a defined MHCI/CD8 affinity threshold. Immunology and Cell Biology, 95 . pp. 68-76. doi:10.1038/icb.2016.85

Dockree, Tamsin, Holland, Christopher J., Clement, Mathew, Ladell, Kristin, McLaren, James E., Berg, Hugo van den, Gostick, Emma, Llewellyn-Lacey, Sian, Man, Stephen, Bailey, Mick, Burrows, Scott R., Price, D. A. and Wooldridge, Linda (2016) CD8+ T-­cell specificity is compromised at a defined major histocompatibility complex class I/CD8 affinity threshold. Immunology and Cell Biology, 95 . pp. 68-76. doi:10.1038/icb.2016.85

Edwards, Lindsey A., Bajaj-Elliott, Mona, Klein, Nigel, Murch, Simon and Phillips, Alan D. (2011) Bacterial-epithelial contact is a key determinant of host innate immune responses to enteropathogenic and enteroaggregative escherichia coli. PLoS One, Vol.6 (No.10). e27030. doi:10.1371/journal.pone.0027030

Eichmann, Ruth and Schäfer, P. (Patrick) (2012) The endoplasmic reticulum in plant immunity and cell death. Frontiers in Plant Science, Volume 3 . Article number 200. doi:10.3389/fpls.2012.00200

Girija, Umakhanth Venkatraman, Furze, Christopher M., Toth, Julia, Schwaeble, Wilhelm J., Mitchell, Daniel A., Keeble, Anthony H. and Wallis, Russell (2010) Engineering novel complement activity into a pulmonary surfactant protein. Journal of Biological Chemistry, Vol.285 (No.10). pp. 546-552. doi:10.1074/jbc.M109.097493

Gladstone, Rebecca A., Loman, Nicholas J., Constantinidou, Chrystala, Tocheva, Anna S., Jefferies, Johanna M. C., Faust, Saul N., O’Connor, Leigh, Chan, Jacqueline, Pallen, Mark J. and Clarke, Stuart C. (2013) Clonal expansion within pneumococcal serotype 6C after use of seven-valent vaccine. PLoS One, Volume 8 (Number 5). e64731. doi:10.1371/journal.pone.0064731

Gomes, M. Gabriela M., Lipsitch, Marc, Wargo, Andrew R., Kurath, Gael, Rebelo, Carlota, Medley, Graham and Coutinho, Antonio (2014) A missing dimension in measures of vaccination impacts. PLoS Pathogens, Volume 10 (Number 3). Article number e1003849. doi:10.1371/journal.ppat.1003849

Hardelid, Pia, Ghebremichael Weldeselassie, Yonas, Whitaker, Heather, Rait, Greta, Gilbert, Ruth and Petersen, Irene (2018) Effectiveness of live attenuated influenza vaccine in preventing amoxicillin prescribing in preschool children : a self-controlled case series study. Journal of Antimicrobial Chemotherapy, 73 (3). pp. 779-786. doi:10.1093/jac/dkx463

Hassan, Marwa, Harrington, Niamh, Sweeney, Esther and Harrison, Freya (2020) Predicting antibiotic-associated virulence of pseudomonas aeruginosa using an ex vivo lung biofilm model. Frontiers in Microbiology, 11 . 568510. doi:10.3389/fmicb.2020.568510

Hogg, Chloe, Horne, Andrew W. and Greaves, Erin (2020) Endometriosis-associated macrophages : origin, phenotype and function. Frontiers in Endocrinology . doi:10.3389/fendo.2020.00007 (In Press)

House, Thomas A. (2014) Epidemiological dynamics of Ebola outbreaks. eLife, Volume 3 . doi:10.7554/eLife.03908

House, Thomas A., Hall, Ian, Danon, Leon and Keeling, Matthew James (2010) Contingency planning for a deliberate release of smallpox in Great Britain : the role of geographical scale and contact structure. BMC Infectious Diseases, Vol.10 . Article no. 25. doi:10.1186/1471-2334-10-25

Humphreys, Ian R., Clement, Mathew, Marsden, Morgan, Ladell, Kristin, McLaren, James E., Smart, Kathryn, Hindley, James P., Bridgeman, Hayley M., Berg, Hugo van den , Price, D. A., Ager, Ann, Wooldridge, Linda, Godkin, Andrew and Gallimore, Awen M. (2012) Avidity of influenza-specific memory CD8+ T-cell populations decays over time compromising antiviral immunity. European Journal of Immunology, Volume 42 (Number 12). pp. 3235-3242. doi:10.1002/eji.201242575

Joubert, Fanny, Martin, Liam T., Perrier, Sébastien and Pasparakis, George (2017) Development of a gemcitabine-polymer conjugate with prolonged cytotoxicity against a pancreatic cancer cell line. ACS Macro Letters, 6 (5). pp. 535-540. doi:10.1021/acsmacrolett.7b00160

Li, Xuan, Thome, Sarah, Ma, Xiaodan, Amrute-Nayak, Mamta, Finigan, Alison, Kitt, Lauren, Masters, Leanne, James, John R., Shi, Yuguang, Meng, Guoyu and Mallat, Ziad (2017) MARK4 regulates NLRP3 positioning and inflammasome activation through a microtubule-dependent mechanism. Nature Communications, 8 . 15986. doi:10.1038/ncomms15986

Lidbury, Ian, Borsetto, Chiara, Murphy, Andrew, Bottrill, Andrew R., Jones, Alexandra M., Bending, G. D., Hammond, John P., Chen, Yin, Wellington, Elizabeth M. H. and Scanlan, David J. (2020) Niche-adaptation in plant-associated Bacteroidetes favours specialisation in organic phosphorus mineralisation. ISME Journal . doi:10.1038/s41396-020-00829-2 (In Press)

Magombedze, Gesham, Shiri, Tinevimbo, Eda, Shigetoshi and Stabel, Judy R. (2017) Inferring biomarkers for Mycobacterium avium subsp. paratuberculosis infection and disease progression in cattle using experimental data. Scientific Reports, 7 . 44765. doi:10.1038/srep44765

Nezis, I. P. (2012) The selectivity and specificity of autophagy in drosophila. Cells, Volume 1 (Number 3). pp. 248-262. doi:10.3390/cells1030248

Okell, Lucy C., Griffin, Jamie T., Kleinschmidt, Immo, Hollingsworth, T. Déirdre, Churcher, Thomas S., White, Michael J., Bousema, Teun, Drakeley, Chris J. and Ghani, Azra C. (2011) The potential contribution of mass treatment to the control of plasmodium falciparum malaria. PLoS One, Volume 6 (Number 5). Article no. e20179. doi:10.1371/journal.pone.0020179

Penman, Bridget S. and Gandon, Sylvain (2020) Adaptive immunity selects against malaria infection blocking mutations. PLOS Computational Biology, 16 (10). e1008181. doi:10.1371/journal.pcbi.1008181

Porphyre, Thibaud, Auty, Harriet K., Tildesley, Michael J., Gunn, George J. and Woolhouse, M. E. J., (Mark E. J.) (2013) Vaccination against Foot-and-mouth disease : do initial conditions affect its benefit? PLOS ONE, Volume 8 (Number 10). Article number e77616. doi:10.1371/journal.pone.0077616

Rock, Kat S., Brand, Samuel, Moir, Jo and Keeling, Matthew James (2014) Dynamics of infectious diseases. Reports on Progress in Physics, Volume 77 (Number 2). Article number 026602. doi:10.1088/0034-4885/77/2/026602

Sande, Charles J., Cane, Patricia and Nokes, D. James (2014) The association between age and the development of respiratory syncytial virus neutralising antibody responses following natural infection in infants. Vaccine, Volume 32 (Number 37). pp. 4726-4729. doi:10.1016/j.vaccine.2014.05.038

Schmidtke, Kelly, Nightingale, Peter G., Reeves, Katharine, Gallier, Suzy, Vlaev, Ivo, Watson, Samuel I. and Lilford, Richard (2020) Randomised controlled trial of a theory-based intervention to prompt front-line staff to take up the seasonal influenza vaccine. BMJ Quality & Safety, 29 (3). bmjqs. doi:10.1136/bmjqs-2019-009775

Spensley, Katrina J., Wikramaratna, Paul S., Penman, Bridget S., Walker, Andrew, Smith, Adrian L., Pybus, Oliver G., Jean, Létitia , Gupta, Sunetra and Lourenço, José (2019) Reverse immunodynamics : a new method for identifying targets of protective immunity. Scientific Reports, 9 . 2164 . doi:10.1038/s41598-018-37288-x

Szomolay, Barbara, Williams, Tamsin, Wooldridge, Linda and Berg, Hugo van den (2013) Co-receptor CD8-mediated modulation of T-cell receptor functional sensitivity and epitope recognition degeneracy. Frontiers in Immunology, Volume 4 . p. 329. doi:10.3389/fimmu.2013.00329

Tohidifar, Payman , Bodhankar,, Girija , Pei, Sichong, Cassidy, C. Keith, Walukiewicz, Hanna , Orodal, George , Stansfeld, Phillip J. and Rao, Christopher (2020) The unconventional cytoplasmic sensing mechanism for ethanol chemotaxis in Bacillus subtilis. mBio, 11 . e02177-20. doi:10.1128/mBio.02177-20

Wallis, Russell, Mitchell, Daniel A., Schmid, Ralf, Schwaeble, Wilhelm J. and Keeble, Anthony H. (2010) Paths reunited: initiation of the classical and lectin pathways of complement activation. Immunobiology, Vol.215 (No.1). pp. 1-11. doi:10.1016/j.imbio.2009.08.006

White, Connor, Pellis, Lorenzo, Keeling, Matthew James and Penman, Bridget S. (2020) Detecting HLA-infectious disease associations for multi-strain pathogens. Infection, Genetics and Evolution, 83 . 104344. doi:10.1016/j.meegid.2020.104344

Williams, Jonathan P., Smith, Daniel C. , Green, Brian N., Marsden, Brian D., Jennings, Keith R., Roberts, L. M. (Lynne M.) and Scrivens, James H. (2006) Gas phase characterization of the noncovalent quaternary structure of Cholera toxin and the Cholera toxin B subunit pentamer. Biophysical Journal, Vol.90 (No.9). pp. 3246-3254. doi:10.1529/biophysj.105.076455

Woolley, Victoria C., Teakle, Graham R., Prince, Gillian, de Moor, C. H. and Chandler, Dave (2020) Cordycepin, a metabolite of Cordyceps militaris, reduces immune-related gene expression in insects. Journal of Invertebrate Pathology . 107480. doi:10.1016/j.jip.2020.107480 (In Press)

Report

Warwick Evidence (Including: Connock, M., Cummins, E., Sutcliffe, P. (Paul), Court, Rachel A., Johnson, Rhona, Grove, Amy L., Ngianga-Bakwin, Kandala, Mohiuddin, Syed and Clarke, Aileen). (2011) Belimumab for the treatment of active autoantibody-positive systemic lupus erythematosus. London: National Institute for Health and Clinical Excellence (NICE).

Thesis or Dissertation

Barlow, Denise P. (1981) The interferon system in the developing mouse embryo and in differentiating teratocarcinoma cells. PhD thesis, University of Warwick.

Bentley, Kirsten (2012) IBV : potential as a vaccine vector and identification of a novel subgenomic mRNA. PhD thesis, University of Warwick.

Clements, Gary James (1988) Studies on the entry of ricin subunits into cells. PhD thesis, University of Warwick.

Heath, Richard Rhead (1996) The role of the cell-mediated immune response to rotavirus infection. PhD thesis, University of Warwick.

Jones, Christopher David (1993) The development of a murine model for analyzing the Th-cell response to a bovine rotavirus. PhD thesis, University of Warwick.

Jones, David Allan (1991) Dendritic cells, hapten presentation and lymph node cell activation following cutaneous sensitization in the mouse. PhD thesis, University of Warwick.

Lowe, David Philip (2013) Characterisation of HLA-specific antibodies. PhD thesis, University of Warwick.

Moore, Shona (2016) An analysis of the structure and function of malarial Duffy-binding-like protein domains using recombinant fusion proteins. PhD thesis, University of Warwick.

Outlaw, Mark C. (1989) Neutralization of influenza virus on respiratory epithelial cells. PhD thesis, University of Warwick.

Shuttleworth, John (1982) Interferon gene expression in virus-induced human B-lymphoblastoid cells. PhD thesis, University of Warwick.

Taylor, Howard Paul (1986) The interaction of influenza virus with neutralizing antibody. PhD thesis, University of Warwick.

Tomkins, Paul Thomas (1989) Interferon modulation of T-cell responses to Semliki Forest virus infected murine brain cells. PhD thesis, University of Warwick.