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PALMsiever : a tool to turn raw data into results for single-molecule localization microscopy
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Pengo, T., Holden, Séamus and Manley, S. (2015) PALMsiever : a tool to turn raw data into results for single-molecule localization microscopy. Bioinformatics, 31 (5). pp. 797-798. doi:10.1093/bioinformatics/btu720 ISSN 1367-4803.
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Official URL: http://dx.doi.org/10.1093/bioinformatics/btu720
Abstract
During the past decade, localization microscopy (LM) has transformed into an accessible, commercially available technique for life sciences. However, data processing can be challenging to the non-specialist and care is still needed to produce meaningful results. PALMsiever has been developed to provide a user-friendly means of visualizing, filtering and analyzing LM data. It includes drift correction, clustering, intelligent line profiles, many rendering algorithms and 3D data visualization. It incorporates the main analysis and data processing modalities used by experts in the field, as well as several new features we developed, and makes them broadly accessible. It can easily be extended via plugins and is provided as free of charge open-source software.
Item Type: | Journal Article | ||||||||
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Divisions: | Faculty of Science, Engineering and Medicine > Science > Life Sciences (2010- ) | ||||||||
Journal or Publication Title: | Bioinformatics | ||||||||
Publisher: | Oxford University Press | ||||||||
ISSN: | 1367-4803 | ||||||||
Official Date: | 1 March 2015 | ||||||||
Dates: |
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Volume: | 31 | ||||||||
Number: | 5 | ||||||||
Page Range: | pp. 797-798 | ||||||||
DOI: | 10.1093/bioinformatics/btu720 | ||||||||
Status: | Peer Reviewed | ||||||||
Publication Status: | Published | ||||||||
Access rights to Published version: | Open Access (Creative Commons) | ||||||||
Copyright Holders: | © The Author 2014. Published by Oxford University Press. |
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