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Interplay of non-covalent interactions in ribbon-like guanosine self-assembly : a NMR crystallography study
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Reddy, G. N. Manjunatha , Marsh, Andrew, Davis, Jeffery T., Masiero, Stefano and Brown, Steven P. (2015) Interplay of non-covalent interactions in ribbon-like guanosine self-assembly : a NMR crystallography study. Crystal Growth & Design, 15 (12). pp. 5945-5954. acs.cgd.5b01440. doi:10.1021/acs.cgd.5b01440 ISSN 1528-7483.
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Official URL: http://dx.doi.org/10.1021/acs.cgd.5b01440
Abstract
A NMR crystallography study shows how intermolecular NH...O, NH...N, OH...N, OH...O and CH–π interactions stabilize the ribbon-like supramolecular structures of three different guanosine derivatives; guanosine dihydrate (G), 3/, 5/–O– dipropanolyl deoxyguanosine (dGC(3)2) and 3/, 5/ –O– isopropylideneguanosine hemihydrate (Gace). Experimental solid-state 1H NMR spectra obtained at 20 T using fast Magic-Angle Spinning (MAS), here at 75 kHz, are presented for a dihydrate of G. For each guanosine derivative, the role of specific interactions is probed by means of NMR chemical shifts calculated using the Density Functional Theory (DFT) Gauge-Including Projector-Augmented Wave (GIPAW) approach for the full crystal and extracted isolated single molecules. Specifically, the isolated molecule to full crystal transformations result in net changes in the GIPAW calculated 1H NMR chemical shifts of up to 8 ppm for OH...O, up to 6.5 ppm for NH...N and up to 4.6 ppm for NH...O hydrogen bonds; notably, the presence of water molecules in G and Gace reinforces the molecular stacking through strong OH...O hydrogen bonds. The sugar conformations are markedly different in G, dG(C3)2 and Gace, and it is shown that the experimental 13C solid-state NMR chemical shift at the C8 position is a reliable indicator of a ‘syn’ (> 135 ppm) or ‘anti’ (< 135 ppm) conformer.
Item Type: | Journal Article | ||||||||||||||||||
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Subjects: | Q Science > QC Physics Q Science > QD Chemistry Q Science > QE Geology |
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Divisions: | Faculty of Science, Engineering and Medicine > Science > Chemistry Faculty of Science, Engineering and Medicine > Science > Physics Faculty of Science, Engineering and Medicine > Science > Centre for Scientific Computing |
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Library of Congress Subject Headings (LCSH): | Magnetic resonance imaging, Crystals -- Structure -- Research, Crystallography -- Research | ||||||||||||||||||
Journal or Publication Title: | Crystal Growth & Design | ||||||||||||||||||
Publisher: | American Chemical Society | ||||||||||||||||||
ISSN: | 1528-7483 | ||||||||||||||||||
Official Date: | 4 November 2015 | ||||||||||||||||||
Dates: |
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Volume: | 15 | ||||||||||||||||||
Number: | 12 | ||||||||||||||||||
Page Range: | pp. 5945-5954 | ||||||||||||||||||
Article Number: | acs.cgd.5b01440 | ||||||||||||||||||
DOI: | 10.1021/acs.cgd.5b01440 | ||||||||||||||||||
Status: | Peer Reviewed | ||||||||||||||||||
Publication Status: | Published | ||||||||||||||||||
Access rights to Published version: | Open Access (Creative Commons) | ||||||||||||||||||
Grant number: | EP/K003674/1 (EPSRC), EP/J010510/1 (EPSRC) | ||||||||||||||||||
RIOXX Funder/Project Grant: |
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