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Single-crystal X-ray diffraction and NMR crystallography of a 1:1 cocrystal of dithianon and pyrimethanil
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Pöppler, Ann Christin, Corletta, Emily K., Pearce, Harriet, Seymour, Mark, Reid, Matthew M., Montgomery, Mark G. and Brown, Steven P. (2017) Single-crystal X-ray diffraction and NMR crystallography of a 1:1 cocrystal of dithianon and pyrimethanil. Acta Crystallographica Section C : Structural Chemistry, C73 (3). pp. 149-156. doi:10.1107/S2053229617000870 ISSN 2053-2296.
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Official URL: http://doi.org/10.1107/S2053229617000870
Abstract
A single-crystal X-ray diffraction structure of a 1:1 cocrystal of two fungicides, namely dithianon (DI) and pyrimethanil (PM), is reported [systematic name: 5,10-dioxo-5H,10H-naphtho[2,3-b][1,4]dithiine-2,3-dicarbonitrile–4,6-dimethyl-N-phenylpyrimidin-2-amine (1/1), C14H4N2O2S2·C12H13N2]. Following an NMR crystallography approach, experimental solid-state magic angle spinning (MAS) NMR spectra are presented together with GIPAW (gauge-including projector augmented wave) calculations of NMR chemical shieldings. Specifically, experimental 1H and 13C chemical shifts are determined from two-dimensional 1H–13C MAS NMR correlation spectra recorded with short and longer contact times so as to probe one-bond C—H connectivities and longer-range C...H proximities, whereas H...H proximities are identified in a 1H double-quantum (DQ) MAS NMR spectrum. The performing of separate GIPAW calculations for the full periodic crystal structure and for isolated molecules allows the determination of the change in chemical shift upon going from an isolated molecule to the full crystal structure. For the 1H NMR chemical shifts, changes of 3.6 and 2.0 ppm correspond to intermolecular N—H...O and C—H...O hydrogen bonding, while changes of −2.7 and −1.5 ppm are due to ring current effects associated with C—H...π interactions. Even though there is a close intermolecular S...O distance of 3.10 Å, it is of note that the molecule-to-crystal chemical shifts for the involved sulfur or oxygen nuclei are small.
Item Type: | Journal Article | ||||||||||||||||||
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Subjects: | Q Science > QD Chemistry S Agriculture > S Agriculture (General) |
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Divisions: | Faculty of Science, Engineering and Medicine > Science > Chemistry Faculty of Science, Engineering and Medicine > Research Centres > Molecular Organisation and Assembly in Cells (MOAC) Faculty of Science, Engineering and Medicine > Science > Physics |
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Library of Congress Subject Headings (LCSH): | Agricultural chemicals | ||||||||||||||||||
Journal or Publication Title: | Acta Crystallographica Section C : Structural Chemistry | ||||||||||||||||||
Publisher: | Wiley | ||||||||||||||||||
ISSN: | 2053-2296 | ||||||||||||||||||
Official Date: | 1 March 2017 | ||||||||||||||||||
Dates: |
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Volume: | C73 | ||||||||||||||||||
Number: | 3 | ||||||||||||||||||
Page Range: | pp. 149-156 | ||||||||||||||||||
DOI: | 10.1107/S2053229617000870 | ||||||||||||||||||
Status: | Peer Reviewed | ||||||||||||||||||
Publication Status: | Published | ||||||||||||||||||
Access rights to Published version: | Open Access (Creative Commons) | ||||||||||||||||||
Date of first compliant deposit: | 26 January 2017 | ||||||||||||||||||
Date of first compliant Open Access: | 30 March 2017 | ||||||||||||||||||
RIOXX Funder/Project Grant: |
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