2022

Hilton, Joe, Riley, Heather L., Pellis, Lorenzo, Aziza, Rabia, Brand, Samuel P. C., Kombe, Ivy K., Ojal, John, Parisi, Andrea, Keeling, Matt J., Nokes, D. James, Manson-Sawko, Robert and House, Thomas A. (2022) A computational framework for modelling infectious disease policy based on age and household structure with applications to the COVID-19 pandemic. PLoS Computational Biology, 18 (9). e1010390. doi:10.1371/journal.pcbi.1010390 ISSN 1553-7358. [ 🗎 Public]. [ (✓) hoa:511 ]

2021

Leng, Trystan, White, Connor, Hilton, Joe, Kucharski, Adam, Pellis, Lorenzo, Stage, Helena, Davies, Nicholas G., Keeling, Matt J. and Flasche, Stefan (2021) The effectiveness of social bubbles as part of a Covid-19 lockdown exit strategy, a modelling study. Wellcome Open Research, 5 . 213. doi:10.12688/wellcomeopenres.16164.2 ISSN 2398-502X. [ 🗎 Public]. [ (✓) hoa:511 ]

2020

White, Connor, Pellis, Lorenzo, Keeling, Matthew James and Penman, Bridget S. (2020) Detecting HLA-infectious disease associations for multi-strain pathogens. Infection, Genetics and Evolution, 83 . 104344. doi:10.1016/j.meegid.2020.104344 ISSN 1567-1348. [ 🗎 Public]. [ (✓) hoa:511 ]

2018

Chapman, Lloyd A. C., Jewell, Chris P., Spencer, Simon E. F., Pellis, Lorenzo, Datta, Samik, Chowdhury, Rajib, Bern, Caryn, Medley, Graham and Hollingsworth, T. Déirdre (2018) The role of case proximity in transmission of visceral leishmaniasis in a highly endemic village in Bangladesh. PLoS Neglected Tropical Diseases, 12 (10). e0006453. doi:10.1371/journal.pntd.0006453 ISSN 1935-2727. [ 🗎 Public].

2017

Atkins, Katie, Baguelin, Marc, Brand, Samuel, Jit, Mark, Keeling, Matthew James, Kibinge, Nelson, Kinyanjui, Timothy, Medley, Graham, Melegaro, Alessia, Munywoki, Patrick, Nokes, D. James, Panovska-Griffiths, Jasmina, Pan-Ngum, Wurichada , Pellis, Lorenzo and White, Lisa (2017) RSV modelling meeting. University of Warwick, Coventry: School of Life Science and Zeeman Institute SBIDER Centre, University of Warwick, UK and KEMRI-Wellcome Trust Research Programme , Kilifi, Kenya. (Unpublished)

2016

Keeling, Matthew James, House, Thomas A., Cooper, A. J. and Pellis, Lorenzo (2016) Systematic approximations to susceptible-infectious-susceptible dynamics on networks. PLoS Computational Biology, 12 (12). e1005296. doi:10.1371/journal.pcbi.1005296 ISSN 1553-7358. [ 🗎 Public]. [ (✓) hoa:511 ]

Lythgoe, Katrina A., Blanquart, François, Pellis, Lorenzo and Fraser, Christophe (2016) Large variations in HIV-1 viral load explained by shifting-mosaic metapopulation dynamics. PLoS Biology, 14 (10). e1002567. doi:10.1371/journal.pbio.1002567 ISSN 1545-7885. [ 🗎 Public]. [ (✓) hoa:511 ]

Kinyanjui, Timothy M., Pellis, Lorenzo and House, Thomas A. (2016) Information content of household-stratified epidemics. Epidemics, 16 . pp. 17-26. ISSN 1755-4365. [ 🗎 Public].

Ball, Frank, Pellis, Lorenzo and Trapman, Pieter (2016) Reproduction numbers for epidemic models with households and other social structures II : comparisons and implications for vaccination. Mathematical Biosciences, 274 . pp. 108-139. doi:10.1016/j.mbs.2016.01.006 ISSN 0025-5564.

2015

Pellis, Lorenzo, House, Thomas A. and Keeling, Matthew James (2015) Exact and approximate moment closures for non-Markovian network epidemics. Journal of Theoretical Biology, 382 (7). pp. 160-177. doi:10.1016/j.jtbi.2015.04.039 ISSN 0022-5193.

Pellis, Lorenzo, Spencer, Simon E. F. and House, Thomas A. (2015) Real-time growth rate for general stochastic SIR epidemics on unclustered networks. Mathematical Biosciences, 265 . pp. 65-81. doi:10.1016/j.mbs.2015.04.006 ISSN 0025-5564. [ 🗎 Public].

Isaac Newton Institute IDD Collaboration (Including:

). (2015) Modeling infectious disease dynamics in the complex landscape of global health. Science, Volume 347 (Number 6227). doi:10.1126/science.aaa4339 ISSN 0036-8075.

Roberts, Mick G., Andreasen, Viggo, Lloyd, Alun and Pellis, Lorenzo (2015) Nine challenges for deterministic epidemic models. Epidemics, 10 . pp. 49-53. doi:10.1016/j.epidem.2014.09.006 ISSN 1755-4365. [ 🗎 Public].

Ball, Frank, Britton, Tom, House, Thomas A., Isham, Valerie, Mollison, Denis, Pellis, Lorenzo and Tomba, Gianpaolo Scalia (2015) Seven challenges for metapopulation models of epidemics, including households models. Epidemics, Volume 10 . pp. 63-67. doi:10.1016/j.epidem.2014.08.001 ISSN 1755-4365. [ 🗎 Public].

Gog, Julia R., Pellis, Lorenzo, Wood, James L. N., McLean, Angela R., Arinaminpathy, Nimalan and Lloyd-Smith, James O. (2015) Seven challenges in modelling pathogen dynamics within-host and across scales. Epidemics, Volume 10 . pp. 45-48. doi:10.1016/j.epidem.2014.09.009 ISSN 1755-4365. [ 🗎 Public].

Pellis, Lorenzo, Ball, Frank, Bansal, Shweta, Eames, Ken T. D., House, Thomas A., Isham, Valerie and Trapman, Pieter (2015) Eight challenges for network epidemic models. Epidemics, 10 . pp. 58-62. doi:10.1016/j.epidem.2014.07.003 ISSN 1755-4365. [ 🗎 Public].

2013

Lythgoe, Katrina A., Pellis, Lorenzo and Fraser, Christophe (2013) Is HIV short-sighted? Insights from a multistrain nested model. Evolution, Volume 67 (Number 10). pp. 2769-2782. doi:10.1111/evo.12166 ISSN 0014-3820. [ 🗎 Public].