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Number of items: 33.
Griesser, Michaela, Lawo, Nora Caroline, Crespo-Martinez, Sara, Schoedl-Hummel, Katharina, Wieczorek, Krzysztof, Goฬrecka, Miroslawa, Liebner, Falk, Zweckmair, Thomas, Pavese, Nancy Stralis, Kreil, David and Forneck, A. (Astrid) (2015) Phylloxera (Daktulosphaira vitifoliae Fitch) alters the carbohydrate metabolism in root galls to allowing the compatible interaction with grapevine (Vitis ssp.) roots. Plant Science, Volume 234 . pp. 38-49. doi:10.1016/j.plantsci.2015.02.002 ISSN 0168-9452.
Su, Zhenqiang, ลabaj, Paweล P., Li, Sheng, Thierry-Mieg, Jean, Thierry-Mieg, Danielle, Shi, Wei, Wang, Charles, Schroth, Gary P., Setterquist, Robert A., Thompson, John F. et al.
(2014)
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium.
Nature Biotechnology , Volume 32
(Number 9).
pp. 903-914.
doi:10.1038/nbt.2957
ISSN 1087-0156.
Simader, Christian, Sayegh, Ramzi G., Montuoro, Alessio, Azhary, Malek, Koth, Anna Lucia, Baratsits, Magdalena, Sacu, Stefan, Prรผnte, Christian, Kreil, David and Schmidt-Erfurth, Ursula (2014) A longitudinal comparison of spectral-domain optical coherence tomography and fundus autofluorescence in geographic atrophy. American Journal of Ophthalmology, Volume 158 (Number 3). 557-566.e1. doi:10.1016/j.ajo.2014.05.026 ISSN 0002-9394.
Li, Sheng, ลabaj, Paweล P, Zumbo, Paul, Sykacek, Peter, Shi, Wei, Shi, Leming, Phan, John, Wu, Po-Yen, Wang, May, Wang, Charles, Thierry-Mieg, Danielle, Thierry-Mieg, Jean, Kreil, David and Mason, Christopher E (2014) Detecting and correcting systematic variation in large-scale RNA sequencing data. Nature Biotechnology, Volume 32 (Number 9). pp. 888-895. doi:10.1038/nbt.3000 ISSN 1087-0156.
Wang, Charles, Gong, Binsheng, Bushel, Pierre R, Thierry-Mieg, Jean, Thierry-Mieg, Danielle, Xu, Joshua, Fang, Hong, Hong, Huixiao, Shen, Jie, Su, Zhenqiang et al.
(2014)
The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance.
Nature Biotechnology, Volume 32
(Number 9).
pp. 926-932.
doi:10.1038/nbt.3001
ISSN 1087-0156.
Ali, Muhammad Amjad, Wieczorek, Krzysztof, Kreil, David and Bohlmann, Holger (2014) The beet cyst nematode Heterodera schachtii modulates the expression of WRKY transcription factors in syncytia to favour its development in a Arabidopsis roots. PLoS One, Volume 9 (Number 7). Article number e102360. doi:10.1371/journal.pone.0102360 ISSN 1932-6203.
Juste, Catherine, Kreil, David, Beauvallet, Christian, Guillot, Alain, Vaca, Sebastian, Carapito, Christine, Mondot, Stanislas, Sykacek, Peter, Sokol, Harry, Blon, Florence et al.
(2014)
Bacterial protein signals are associated with Crohn's disease.
Gut, Volume 63
(Number 10).
doi:10.1136/gutjnl-2012-303786
ISSN 0017-5749.
Sayegh, R. G., Kiss, C. G., Simader, C., Kroisamer, J., Montuoro, A., Mittermuller, T. J., Azhary, M., Bolz, M., Kreil, David and Schmidt-Erfurth, U. (2014) A systematic correlation of morphology and function using spectral domain optical coherence tomography and microperimetry in patients with geographic atrophy. British Journal of Ophthalmology, Volume 98 (Number 8). pp. 1050-1055. doi:10.1136/bjophthalmol-2014-305195 ISSN 0007-1161.
Schweiger, W. (Wolfgang), Steiner, B. (Barbara), Ametz, Christian, Siegwart, Gerald, Wiesenberger, Gerlinde, Berthiller, Franz, Lemmens, Marc, Jia, Haiyan, Adam, G. (Gerhard), Muehlbauer, Gary J., Kreil, David and Buerstmayr, Hermann (2013) Transcriptomic characterization of two major Fusarium resistance quantitative trait loci (QTLs), Fhb1 and Qfhs.ifa-5A, identifies novel candidate genes. Molecular Plant Pathology, Volume 14 (Number 8). pp. 772-785. doi:10.1111/mpp.12048 ISSN 1464-6722.
Jadhav, Vaibhav, Hackl, Matthias, Druz, Aliaksandr, Shridhar, Smriti, Chung, Cheng-Yu, Heffner, Kelley M., Kreil, David, Betenbaugh, Mike, Shiloach, Joseph, Barron, Niall, Grillari, Johannes and Borth, Nicole (2013) CHO microRNA engineering is growing up : recent successes and future challenges. Biotechnology Advances, Volume 31 (Number 8). pp. 1501-1513. doi:10.1016/j.biotechadv.2013.07.007 ISSN 0734-9750.
Elashry, Abdelnaser, Okumoto, Sakiko, Siddique, Shahid, Koch, Wolfgang, Kreil, David and Bohlmann, Holger (2013) The AAP gene family for amino acid permeases contributes to development of the cyst nematode Heterodera schachtii in roots of Arabidopsis. Plant Physiology and Biochemistry, Volume 70 . pp. 379-386. doi:10.1016/j.plaphy.2013.05.016 ISSN 0981-9428.
Harrison, Andrew B., Binder, Hans, Buhot, Arnaud , Burden, Conrad John, Carlon, Enrico, Gibas, Cynthia, Gamble, Lara J., Halperin, Avraham, Hooyberghs, Jef, Kreil, David, Levicky, Rastislav, Noble, Peter A., Ott, Albrecht, Pettitt, B. Montgomery, Tautz, Diethard and Pozhitkov, Alexander E. (2013) Physico-chemical foundations underpinning microarray and next-generation sequencing experiments. Nucleic Acids Research, Volume 41 (Number 5). pp. 2779-2796. doi:10.1093/nar/gks1358 ISSN 0305-1048.
ลabaj, Paweล P., Linggi, Bryan E., Wiley, H. Steven and Kreil, David (2012) Improving RNA-Seq precision with MapAl. Frontiers in Genetics, Vol.3 . doi:10.3389/fgene.2012.00028 ISSN 1664-8021.
Siddique, Shahid, Wieczorek, Krzysztof, Szakasits, Dagmar, Kreil, David and Bohlmann, Holger (2011) The promoter of a plant defensin gene directs specific expression in nematode-induced syncytia in Arabidopsis roots. Plant Physiology and Biochemistry, Vol.49 (No.10). pp. 1100-1107. doi:10.1016/j.plaphy.2011.07.005 ISSN 0981-9428.
Sayegh, Ramzi G., Simader, Christian, Scheschy, Ulrike, Montuoro, Alessio, Kiss, Christopher, Sacu, Stefan, Kreil, David, Prรผnte, Christian and Schmidt-Erfurth, Ursula (2011) A systematic comparison of spectral-domain optical coherence tomography and Fundus Autofluorescence in patients with geographic atrophy. Ophthalmology, Vol.118 (No.9). pp. 1844-1851. doi:10.1016/j.ophtha.2011.01.043 ISSN 0161-6420.
Bรถhmdorfer, Gudrun, Schleiffer, Alexander, Brunmeir, Reinhard, Ferscha, Stefan, Nizhynska, Viktoria, Kozรกk, Jaroslav, Angelis, Karel J., Kreil, David and Schweizer, Dieter (2011) GMI1, a structural-maintenance-of-chromosomes-hinge domain-containing protein, is involved in somatic homologous recombination in Arabidopsis. Plant Journal, Vol.67 (No.3). pp. 420-433. doi:10.1111/j.1365-313X.2011.04604.x ISSN 0960-7412.
Labaj, P. P., Leparc, G. G., Linggi, B. E., Markillie, L. M., Wiley, H. S. and Kreil, David (2011) Characterization and improvement of RNA-Seq precision in quantitative transcript expression profiling. Bioinformatics, Vol.27 (No.13). i383-i391. doi:10.1093/bioinformatics/btr247 ISSN 1367-4803.
ลabaj, Paweล P, Sykacek, Peter and Kreil, David (2011) An analysis of single amino acid repeats as use case for application specific background models. BMC Bioinformatics, Vol.12 (No.1). p. 173. doi:10.1186/1471-2105-12-173 ISSN 1471-2105.
Sykacek, Peter, Kreil, David, Meadows, Lisa A, Auburn, Richard P, Fischer, Bettina, Russell, Steven and Micklem, Gos (2011) The impact of quantitative optimization of hybridization conditions on gene expression analysis. BMC Bioinformatics, Vol.12 (No.1). p. 73. doi:10.1186/1471-2105-12-73 ISSN 1471-2105.
Minois, Nadรจge, Sykacek, Peter, Godsey, Brian and Kreil, David (2010) RNA interference in ageing research โ a mini-review. Gerontology, Vol.56 (No.5). pp. 496-506. doi:10.1159/000277626 ISSN 0304-324X.
ลabaj, Paweล P., Leparc, Germรกn G., Bardet, Anaรฏs F., Kreil, Gรผnther and Kreil, David (2010) Single amino acid repeats in signal peptides. FEBS Journal, Vol.277 (No.15). pp. 3147-3157. doi:10.1111/j.1742-4658.2010.07720.x ISSN 1742-464x.
Bechstedt, S., Albert, J.T., Kreil, David, Mรผller-Reichert, T., Gรถpfert, M.C. and Howard, J. (2010) A doublecortin containing microtubule-associated protein is implicated in mechanotransduction in Drosophila sensory cilia. Nature Communications, Vol.1 (No.1). pp. 1-11. doi:10.1038/ncomms1007 ISSN 2041-1723.
Dragosits, Martin, Stadlmann, Johannes, Graf, Alexandra, Gasser, Brigitte, Maurer, Michael, Sauer, Michael, Kreil, David, Altmann, Friedrich and Mattanovich, Diethard (2010) The response to unfolded protein is involved in osmotolerance of Pichia pastoris. BMC Genomics, Vol.11 (No.1). p. 207. doi:10.1186/1471-2164-11-207 ISSN 1471-2164.
Mueckstein, Ulrike, Leparc, Germรกn G, Posekany, Alexandra, Hofacker, Ivo and Kreil, David (2010) Hybridization thermodynamics of NimbleGen Microarrays. BMC Bioinformatics, Vol.11 (No.1). p. 35. doi:10.1186/1471-2105-11-35 ISSN 1471-2105.
Kanno, Tatsuo, Bucher, Etienne, Daxinger, Lucia, Huettel, Bruno, Kreil, David, Breinig, Frank, Lind, Marc, Schmitt, Manfred J, Simon, Stacey A, Gurazada, Sai Guna Ranjan, Meyers, Blake C, Lorkovic, Zdravko J, Matzke, Antonius J M and Matzke, Marjori (2010) RNA-directed DNA methylation and plant development require an IWR1-type transcription factor. EMBO reports, Vol.11 (No.1). pp. 65-71. doi:10.1038/embor.2009.246 ISSN 1469-221X.
Siddique, Shahid, Endres, Stefanie, Atkins, Jamie M., Szakasits, Dagmar, Wieczorek, Krzysztof, Hofmann, Julia, Blaukopf, Claudia, Urwin, Peter E., Tenhaken, Raimund, Grundler, Florian M. W., Kreil, David and Bohlmann, Holger (2009) Myo-inositol oxygenase genes are involved in the development of syncytia induced byHeterodera schachtiiin Arabidopsis roots. New Phytologist, Vol.184 (No.2). pp. 457-472. doi:10.1111/j.1469-8137.2009.02981.x ISSN 0028-646X.
Leitner, Judith, Klauser, Christoph, Pickl, Winfried F., Stรถckl, Johannes, Majdic, Otto, Bardet, Anaรฏs F., Kreil, David, Dong, Chen, Yamazaki, Tomohide, Zlabinger, Gerhard, Pfistershammer, Katharina and Steinberger, Peter (2009) B7-H3 is a potent inhibitor of human T-cell activation: No evidence for B7-H3 and TREML2 interaction. European Journal of Immunology, Vol.39 (No.7). pp. 1754-1764. doi:10.1002/eji.200839028 ISSN 0014-2980.
Leparc, G. G., Tuchler, T., Striedner, G., Bayer, K., Sykacek, P., Hofacker, I. L. and Kreil, David (2009) Model-based probe set optimization for high-performance microarrays. Nucleic Acids Research, Vol.37 (No.3). e18-e18. doi:10.1093/nar/gkn1001 ISSN 0305-1048.
Chaix, R., Somel, M., Kreil, David, Khaitovich, P. and Lunter, G. A. (2008) Evolution of primate gene expression : drift and corrective sweeps? Genetics, Vol.180 (No.3). pp. 1379-1389. doi:10.1534/genetics.108.089623 ISSN 0016-6731.
Ecker, Joseph R., Huettel, Bruno, Kreil, David, Matzke, Marjori and Matzke, Antonius J. M. (2008) Effects of aneuploidy on genome structure, expression, and interphase organization in Arabidopsis thaliana. PLoS Genetics, Vol.4 (No.10). e1000226. doi:10.1371/journal.pgen.1000226 ISSN 1553-7390.
Tรผchler, Thomas, Velez, Golda, Graf, Alexandra and Kreil, David (2008) BibGlimpse : the case for a light-weight reprint manager in distributed literature research. BMC Bioinformatics, Vol.9 (No.1). p. 406. doi:10.1186/1471-2105-9-406 ISSN 1471-2105.
Graf, Alexandra, Gasser, Brigitte, Dragosits, Martin, Sauer, Michael, Leparc, Germรกn G, Tรผchler, Thomas, Kreil, David and Mattanovich, Diethard (2008) Novel insights into the unfolded protein response using Pichia pastoris specific DNA microarrays. BMC Genomics, Vol.9 (No.1). p. 390. doi:10.1186/1471-2164-9-390 ISSN 1471-2164.
Kanno, Tatsuo, Bucher, Etienne, Daxinger, Lucia, Huettel, Bruno, Bรถhmdorfer, Gudrun, Gregor, Wolfgang, Kreil, David, Matzke, Marjori and Matzke, Antonius J M (2008) A structural-maintenance-of-chromosomes hinge domainโcontaining protein is required for RNA-directed DNA methylation. Nature Genetics, Vol.40 (No.5). pp. 670-675. doi:10.1038/ng.119 ISSN 1061-4036.
This list was generated on Fri Mar 29 10:18:45 2024 GMT.