Journal Article

Domijan, Mirela, Brown, Paul E., Shulgin, Boris V. and Rand, D. A. (David A.) (2016) PeTTSy : a computational tool for perturbation analysis of complex systems biology models. BMC Bioinformatics, 17 (124). doi:10.1186/s12859-016-0972-2 ISSN 1471-2105.

Domijan, Mirela and Rand, D. A. (David A.) (2015) Using constraints and their value for optimization of large ODE systems. Journal of The Royal Society Interface, Volume 12 (Number 104). Article number 20141303. doi:10.1098/rsif.2014.1303 ISSN 1742-5689.

Gould, Peter D., Ugarte, Nicolas, Domijan, Mirela, Costa, Maria J. (Maria João), Foreman, Julia, MacGregor, Dana, Rose, Ken, Griffiths, Jayne, Millar, A. J. (Andrew J.), Finkenstädt, Bärbel, Penfield, Steven, Rand, D. A. (David A.), Halliday, Karen J. and Hall, Anthony J. W. (2013) Network balance via CRY signalling controls the Arabidopsis circadian clock over ambient temperatures. Molecular Systems Biology, Volume 9 . Article no. 650. doi:10.1038/msb.2013.7 ISSN 1744-4292.

Domijan, Mirela and Pécou, Élisabeth (2012) The interaction graph structure of mass-action reaction networks. Journal of Mathematical Biology, 65 . pp. 375-402. doi:10.1007/s00285-011-0462-0 ISSN 0303-6812.

Domijan, Mirela and Rand, D. A. (David A.) (2011) Balance equations can buffer noisy and sustained environmental perturbations of circadian clocks. Interface Focus, Vol.1 (No.1). pp. 177-186. doi:10.1098/rsfs.2010.0007 ISSN 2042-8898.

Domijan, Mirela and Kirkilionis, Markus (2009) Bistability and oscillations in chemical reaction networks. Journal of Mathematical Biology, Vol.59 (No.4). pp. 467-501. doi:10.1007/s00285-008-0234-7 ISSN 0303-6812.

Conference Item

Kirkilionis, Markus, Domijan, Mirela, Eigel, M., George, E., Li, Mike and Sbano, L. (2009) A definition of cellular interface problems. In: 9th International Workshop on Membrane Computing, Edinburgh, Scotland, July 28-31, 2008. Published in: Lecture Notes in Computer Science, Vol.5391 pp. 36-62. ISBN 978-3-540-95884-0. doi:10.1007/978-3-540-95885-7_4 ISSN 0302-9743.

Domijan, Mirela and Kirkilionis, Markus (2008) Graph theory and qualitative analysis of reaction networks. In: Annual European Conference on Complex Systems, Dresden, Germany, Oct 01-06, 2007. Published in: Networks and Heterogeneous Media , Vol.3 (No.2). pp. 295-322. ISSN 1556-1801.