2019

Zhang, Lihong, Calvo-Bado, Leo A., Murray, A. K., Amos, Gregory C. A., Hawkey, P. M., Wellington, E. M. H. and Gaze, William H. (2019) Novel clinically relevant antibiotic resistance genes associated with sewage sludge and industrial waste streams revealed by functional metagenomic screening. Environment International, 132 . p. 105120. doi:10.1016/j.envint.2019.105120

2018

Amos, Gregory C. A., Ploumakis, Semina, Zhang, Lihong, Hawkey, Peter M., Gaze, William H. and Wellington, E. M. H. (2018) The widespread dissemination of integrons throughout bacterial communities in a riverine system. The ISME Journal, 12 (3). pp. 681-691. doi:10.1038/s41396-017-0030-8

2016

Lehmann, Katja, Bell, Thomas, Bowes, Michael J., Amos, Gregory C. A., Gaze, William H., Wellington, E. M. H. and Singer, Andrew C. (2016) Trace levels of sewage effluent are sufficient to increase class 1 integron prevalence in freshwater biofilms without changing the core community. Water Research, 106 . pp. 163-170. doi:10.1016/j.watres.2016.09.035

Cleary, David W., Bishop, Alistair H., Zhang, Lihong, Topp, Edward, Wellington, E. M. H., Gaze, William H. and Smalla, Kornelia (2016) Long-term antibiotic exposure in soil is associated with changes in microbial community structure and prevalence of class 1 integrons. FEMS Microbiology Ecology, 92 (10). fiw159. doi:10.1093/femsec/fiw159

Salimraj, Ramya, Zhang, Lihong, Hinchliffe, Philip, Wellington, E. M. H., Brem, Jürgen, Schofield, Christopher J., Gaze, William H. and Spencer, James (2016) Structural and biochemical characterization of Rm3, a subclass B3 Metallo-β-Lactamase identified from a functional metagenomic study. Antimicrobial Agents and Chemotherapy, 60 (10). pp. 5828-5840. doi:10.1128/AAC.00750-16

2015

King, Hayley C., Murphy, Andrew, James, Phillip, Travis, Emma Rachel, Porter, David, Hung, Yu-Jiun, Sawyer, Jason, Cork, Jennifer, Delahay, Richard J., Gaze, William H., Courtenay, Orin and Wellington, E. M. H. (2015) The variability and seasonality of the environmental reservoir of Mycobacterium bovis shed by wild European badgers. Scientific Reports, 5 . pp. 1-7. 12318. doi:10.1038/srep12318

Amos, Gregory C. A., Carter, Abigail, Hawkey, Peter M., Gaze, William H. and Wellington, E. M. H. (2015) The hidden resistome of retail chicken meat. Journal of Global Antimicrobial Resistance, 3 (1). pp. 44-46. doi:10.1016/j.jgar.2014.11.003

Amos, Gregory C. A., Gozzard, Emma , Carter, Charlotte E., Mead, A. (Andrew), Bowes, Mike J., Hawkey, P. M., Zhang, Lihong, Singer, Andrew C., Gaze, William H. and Wellington, E. M. H. (2015) Validated predictive modelling of the environmental resistome. The ISME Journal, 9 . p. 1467. doi:10.1038/ismej.2014.237

2014

Amos, Gregory C. A., Zhang, Lihong, Hawkey, P. M., Gaze, William H. and Wellington, E. M. H. (2014) Functional metagenomic analysis reveals rivers are a reservoir for diverse antibiotic resistance genes. Veterinary Microbiology, Volume 171 (Number 3-4). pp. 441-447. doi:10.1016/j.vetmic.2014.02.017

Amos, Gregory C. A., Hawkey, P. M., Gaze, William H. and Wellington, E. M. H. (2014) Waste water effluent contributes to the dissemination of CTX-M-15 in the natural environment. Journal of Antimicrobial Chemotherapy, Volume 69 (Number 7). pp. 1785-1791. doi:10.1093/jac/dku079

Dealtry, Simone, Ding, Guo-Chun, Weichelt, Viola, Dunon, Vincent, Schlüter, Andreas, Martini, María Carla, Papa, María Florencia Del, Lagares, Antonio, Amos, Gregory C. A., Wellington, E. M. H., Gaze, William H., Sipkema, Detmer, Sjöling, Sara, Springael, Dirk, Heuer, Holger, Elsas, J. D. van, Thomas, Christopher M. and Smalla, Kornelia (2014) Cultivation-independent screening revealed hot spots of IncP-1, IncP-7 and IncP-9 plasmid occurrence in different environmental habitats. PLoS One, Volume 9 (Number 2). Article number e89922. doi:10.1371/journal.pone.0089922

2013

Gaze, William H., Krone, Stephen M., Larsson, D.G. Joakim, Li, Xian-Zhi, Robinson, Joseph A., Simonet, Pascal, Smalla, Kornelia, Timinouni, Mohammed, Topp, Ed, Wellington, E. M. H., Wright, Gerard D. and Zhu, Yong-Guan (2013) Influence of humans on evolution and mobilization of environmental antibiotic resistome. Emerging Infectious Diseases , Volume 19 (Number 7). doi:10.3201/eid1907.120871

Wellington, E. M. H., Boxall, Alistair B. A., Cross, Paul, Feil, Edward J., Gaze, William H., Hawkey, P. M., Johnson-Rollings, Ashley S., Jones, Davey L., Lee, Nick, Otten, Wilfred, Thomas, Christopher M. and Williams, A. Prysor (2013) The role of the natural environment in the emergence of antibiotic resistance in Gram-negative bacteria. The Lancet Infectious Diseases, Vol.13 (No.2). pp. 155-165. doi:10.1016/S1473-3099(12)70317-1

2011

Tsibidis, George D., Burroughs, Nigel John, Gaze, William H. and Wellington, E. M. H. (2011) Semi-automated Acanthamoeba polyphaga detection and computation of Salmonella typhimurium concentration in spatio-temporal images. Micron, Vol.42 (No.8). pp. 911-920. doi:10.1016/j.micron.2011.06.010

Calvo-Bado, Leo A., Oakley, Brian B., Dowd, Scot E., Green, Laura E., Medley, Graham, Ul-Hassan, Atiya, Bateman, Vicky, Gaze, William H., Witcomb, Luci, Grogono-Thomas, Rosemary, Kaler, Jasmeet, Russell, Claire L. and Wellington, E. M. H. (2011) Ovine pedomics : the first study of the ovine foot 16S rRNA-based microbiome. ISME Journal, Vol.5 (No.9). pp. 1426-1437. doi:10.1038/ismej.2011.25

Pontiroli, Alessandra, Travis, Emma Rachel, Sweeney, F. P., Porter, David, Gaze, William H., Mason, Sam, Hibberd, V., Holden, Jennifer, Courtenay, Orin and Wellington, E. M. H. (2011) Pathogen quantitation in complex matrices : a multi-operator comparison of DNA extraction methods with a novel assessment of PCR inhibition. PLoS One, Vol.6 (No.3). Article number e17916. doi:10.1371/journal.pone.0017916

Byrne-Bailey, K. G., Gaze, William H., Zhang, Lihong, Kay, Paul, Boxall, Alistair B.A. , Hawkey, P. M. and Wellington, E. M. H. (2011) Integron prevalence and diversity in manured soil. Applied and Environmental Microbiology, Vol.77 (No.2). pp. 684-687. doi:10.1128/AEM.01425-10

Gaze, William H., Zhang, Lihong, Abdouslam, Nouradin A., Hawkey, P. M., Calvo-Bado, Leo A., Royle, Jeremy, Brown, Helen, Davis, Susan, Kay, Paul, Boxall, Alistair B. A. and Wellington, E. M. H. (2011) Impacts of anthropogenic activity on the ecology of class 1 integrons and integron-associated genes in the environment. ISME Journal, Vol.5 (No.8). pp. 1253-1261. doi:10.1038/ismej.2011.15

Anukool, Usanee, O’Neill, Colette E., Butr-Indr, Bordin, Hawkey, P. M., Gaze, William H. and Wellington, E. M. H. (2011) Meticillin-resistant Staphylococcus aureus in pigs from Thailand. International Journal of Antimicrobial Agents, Volume 38 (Number 1). pp. 86-87. doi:10.1016/j.ijantimicag.2011.02.018

Gaze, William H., Morgan, Gina, Zhang, Lihong and Wellington, E. M. H. (2011) Mimivirus-like particles in Acanthamoebae from sewage sludge. Emerging Infectious Diseases , Volume 17 (Number 6). pp. 1127-1129. doi:10.3201/eid1706.101282

Travis, Emma Rachel, Gaze, William H., Pontiroli, Alessandra, Sweeney, Francis P., Porter, David, Mason, Sam, Keeling, Matthew James, Jones, Rebecca M., Sawyer, Jason, Aranaz, Alicia, Castellanos Rizaldos, Elena, Cork, Jennifer, Delahay, Richard J., Wilson, Gavin J., Hewinson, R. Glyn, Courtenay, Orin and Wellington, E. M. H. (2011) An inter-laboratory validation of a real time PCR assay to measure host excretion of bacterial pathogens, particularly of mycobacterium bovis. PLoS One, Vol.6 (No.11). e27369. doi:10.1371/journal.pone.0027369

2010

(2010) The dynamic architecture of the metabolic switch in Streptomyces coelicolor. BMC Genomics, Vol.11 (Article 10). doi:10.1186/1471-2164-11-10

(2010) The dynamic architecture of the metabolic switch in Streptomyces coelicolor. BMC Genomics, 11 . p. 10. doi:DOI: 10.1186/1471-2164-11-10

2009

Rossello, M. R., Griffiths, Nathan, Kalvala, Sara, Wellington, E. M. H. and Gaze, William H. (2009) Networking strategies in streptomyces coelicolor. In: 2nd International Conference on Bioinformatics and Systems Biology (BSB 2009), Leipzig, Germany, 23-25 March 2009 (Unpublished)

Byrne-Bailey, K. G., Gaze, William H., Kay, Paul, Boxall, Alistair B.A. , Hawkey, P. M. and Wellington, E. M. H. (2009) Prevalence of sulfonamide resistance genes in bacterial isolates from manured agricultural soils and pig slurry in the United Kingdom. Antimicrobial Agents and Chemotherapy, Vol.53 (No.2). pp. 696-702. doi:10.1128/AAC.00652-07

2008

Gaze, William H., O'Neill, Colette, Wellington, E. M. H. and Hawkey, P. M. (2008) Antibiotic resistance in the environment, with particular reference to MRSA. Advances in Applied Microbiology, Vol.63 . pp. 249-280. doi:10.1016/S0065-2164(07)00007-X

2007

Sweeney, F. P., Courtenay, Orin, Hibberd, V., Hewinson, R. G., Reilly, L. A., Gaze, William H. and Wellington, E. M. H. (2007) Environmental monitoring of Mycobacterium bovis in badger feces and badger sett soil by real-time PCR, as confirmed by immunofluorescence, immunocapture, and cultivation. Applied and Environmental Microbiology, Vol.73 (No.22). pp. 7471-7473. doi:10.1128/AEM.00978-07