2023

Meng, Xiang, Reed, Alan Pledger, Lai, Sandie, Szavits-Nossan, Juraj and McCarthy, John E. G. (2023) Stochastic scanning events on the GCN4 mRNA 5’ untranslated region generate cell-to-cell heterogeneity in the yeast nutritional stress response. Nucleic Acids Research . doi:10.1093/nar/gkad433 ISSN 0305-1048. (In Press)

2021

McCarthy, John E. G. (2021) Engineering and standardization of posttranscriptional biocircuitry in Saccharomyces cerevisiae. Integrative Biology, 13 (8). pp. 210-220. doi:10.1093/intbio/zyab013 ISSN 1757-9694.

de Souza‐Guerreiro, Tailise Carolina , Meng, Xiang, Dacheux, Estelle, Firczuk, Helena and McCarthy, John E. G. (2021) Translational control of gene expression noise and its relationship to ageing in yeast. The FEBS Journal, 288 (7). pp. 2278-2293. doi:10.1111/febs.15594 ISSN 1742-4658.

2020

Firczuk, Helena, Teahan, James, Mendes, Pedro and McCarthy, John E. G. (2020) Multi-site rate control analysis identifies ribosomal scanning as the sole high-capacity/low-flux-control step in mRNA translation. FEBS Journal, 287 (5). pp. 925-940. doi:10.1111/febs.15059 ISSN 1742-4658.

2019

Santos Rodrigues, Fabio Henrique dos, Firczuk, Helena , Breeze, Alexander L., Cameron, Alexander, Walko, Martin, Wilson, Andrew J, Zanchin , Nilson I.T. and McCarthy, John E. G. (2019) The Leishmania PABP1–eIF4E4 interface : a novel 5′–3′ interaction architecture for trans-spliced mRNAs. Nucleic Acids Research, 47 (3). pp. 1493-1504. doi:10.1093/nar/gky1187 ISSN 0305-1048.

2017

Dacheux, Estelle, Malys, Naglis, Meng, Xiang, Ramachandran, Vinoy, Mendes, Pedro and McCarthy, John E. G. (2017) Translation initiation events on structured eukaryotic mRNAs generate gene expression noise. Nucleic Acids Research, 45 (11). pp. 6981-6992. doi:10.1093/nar/gkx430 ISSN 0305-1048.

2016

Meng, Xiang, Firczuk, Helena, Pietroni, Paola, Westbrook, Richard, Dacheux, Estelle, Mendes, Pedro and McCarthy, John E. G. (2016) Minimum-noise production of translation factor eIF4G maps to a mechanistically determined optimal rate control window for protein synthesis. Nucleic Acids Research, 45 (2). pp. 1015-1025. doi:10.1093/nar/gkw1194 ISSN 0305-1048.

McCarthy, John E. G. (2016) WISB : Warwick Integrative Synthetic Biology Centre. Biochemical Society Transactions, 44 (3). pp. 678-680. doi:10.1042/BST20160011 ISSN 0300-5127.

Garcia-Ojalvo, Jordi, Khalil, Ahmad S. and McCarthy, John E. G. (2016) Editorial : Biological insights from synthetic biology. Integrative Biology, 8 (4). pp. 380-382. doi:10.1039/c6ib90013e ISSN 1757-9694.

2013

Firczuk, Helena, Kannambath, Shichina, Pahle, Jürgen, Claydon, Amy J., Beynon, R. J. (Robert J.), Duncan, John, Westerhoff, Hans V., Mendes, Pedro and McCarthy, John E. G. (2013) An in vivo control map for the eukaryotic mRNA translation machinery. Molecular Systems Biology, Vol.9 . p. 635. doi:10.1038/msb.2012.73 ISSN 1744-4292.

(2013) A model of yeast glycolysis based on a consistent kinetic characterisation of all its enzymes. FEBS Letters, Volume 587 (Number 17). pp. 2832-2841. doi:10.1016/j.febslet.2013.06.043 ISSN 0014-5793.

2011

Drummond, Sheona P., Hildyard, John, Firczuk, Helena, Reamtong, Onrapak, Li, Ning, Kannambath, Shichina, Claydon, Amy J., Beynon, R. J. (Robert J.), Eyers, Claire E. and McCarthy, John E. G. (2011) Diauxic shift-dependent relocalization of decapping activators Dhh1 and Pat1 to polysomal complexes. Nucleic Acids Research, Vol.39 (No.17). pp. 7764-7774. doi:10.1371/journal.pone.0023630 ISSN 1362-4962.

Malys, Naglis, Wishart, Jill A., Oliver, Stephen G. and McCarthy, John E. G. (2011) Protein production in Saccharomyces cerevisiae for systems biology studies. In: Jameson, Daniel and Verma , Malkhey and Westerhoff, Hans V. , (eds.) Methods in Systems Biology. Methods in Enzymology, Vol.500 . Academic Press, pp. 197-212. ISBN 9780123851185

McCarthy, John E. G. (2011) Synthetic biology themed issue. Integrative Biology, Volume 3 (Number 2). p. 85. doi:10.1039/c1ib90001c

2010

Stevenson, Abigail L., Juanes, Pedro P. and McCarthy, John E. G. (2010) Elucidating mechanistic principles underpinning eukaryotic translation initiation using quantitative fluorescence methods. Biochemical Society Transactions, Volume 38 (Number 6). pp. 1587-1592. doi:10.1042/BST0381587 ISSN 0300-5127.

Cridge, A. G., Castelli, L. M., Smirnova, J. B., Selley, J. N., Rowe, W., Hubbard, S. J., McCarthy, John E. G., Ashe, M. P., Grant, C. M. and Pavitt, G. D. (2010) Identifying eIF4E-binding protein translationally-controlled transcripts reveals links to mRNAs bound by specific PUF proteins. Nucleic Acids Research, Vol.38 (No.22). pp. 8039-8050. doi:10.1093/nar/gkq686 ISSN 0305-1048.

Tait, S., Dutta, K., Cowburn, D., Warwicker, J., Doig, A. J. and McCarthy, John E. G. (2010) Local control of a disorder-order transition in 4E-BP1 underpins regulation of translation via eIF4E. Proceedings of the National Academy of Sciences, Vol.107 (No.41). pp. 17627-17632. doi:10.1073/pnas.1008242107 ISSN 0027-8424.

Dixon, N., Duncan, J. N., Geerlings, T., Dunstan, M. S., McCarthy, John E. G., Leys, D. and Micklefield, J. (2010) Reengineering orthogonally selective riboswitches. Proceedings of the National Academy of Sciences, Vol.107 (No.7). pp. 2830-2835. doi:10.1073/pnas.0911209107 ISSN 0027-8424.