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Number of items: 44.
2022
McLellan, Hazel, Harvey, Sarah E., Steinbrenner, Jens, Armstrong, Miles R., He, Qin, Clewes, Rachel, Pritchard, Leighton, Wang, Wei, Wang, Shumei, Nussbaumer, Thomas et al.
(2022)
Exploiting breakdown in nonhost effectorβtarget interactions to boost host disease resistance.
Proceedings of the National Academy of Sciences, 119
(35).
e2114064119.
doi:10.1073/pnas.2114064119
ISSN 0027-8424.
2016
Bechtold, Ulrike, Penfold, Christopher A., Jenkins, Dafyd J., Legaie, Roxane, Moore, Jonathan D., Lawson, Tracy, Matthews, Jack S.A., Vialet-Chabrand, Silvere R. M., Baxter, Laura, Subramaniam, Sunitha et al.
(2016)
Time-series transcriptomics reveals that AGAMOUS-LIKE22 affects primary metabolism and developmental processes in drought-stressed Arabidopsis.
The Plant Cell, 28
(2).
pp. 345-366.
doi:10.1105/tpc.15.00910
ISSN 1040-4651.
2015
Lewis, Laura, Polanskia, Krzysztof, de Torres-Zabala, Marta, Jayaraman, Siddharth, Bowden, Laura, Moore, Jonathan D., Penfold, Christopher A., Jenkins, Dafyd J., Hills, Claire E., Baxter, Laura et al.
(2015)
Transcriptional dynamics driving MAMP-triggered immunity and pathogen effector-mediated immunosuppression in Arabidopsis leaves following infection with pseudomonas syringae pv tomato DC3000.
The Plant Cell, 27
(11).
pp. 3038-3064.
doi:10.1105/tpc.15.00471
ISSN 1040-4651.
Coker, Timothy L. R., Cevik, Volkan, Beynon, Jim and Gifford, Miriam L. (2015) Spatial dissection of the Arabidopsis thaliana transcriptional response to downy mildew using fluorescence activated cell sorting. Frontiers in plant science, Volume 6 . pp. 1-13. Article number 527. doi:10.3389/fpls.2015.00527 ISSN 1664-462X.
2014
Piquerez, Sophie J. M., Harvey, Sarah E., Beynon, Jim and Ntoukakis, Vardis (2014) Improving crop disease resistance : lessons from research on Arabidopsis and tomato. Frontiers in Plant Science, Volume 5 . pp. 1-13. Article number 671 . doi:10.3389/fpls.2014.00671 ISSN 1664-462X.
PolaΕski, Krzysztof , Rhodes, Johanna, Hills, Claire E., Zhang, Peijun, Jenkins, Dafyd J., Kiddle, Steven J., Jironkin, Aleksey, Beynon, Jim, Buchanan-Wollaston, Vicky, Ott, Sascha and Denby, Katherine J. (2014) Wigwams : identifying gene modules co-regulated across multiple biological conditions. Bioinformatics, Volume 30 (Number 7). pp. 962-970. doi:10.1093/bioinformatics/btt728 ISSN 1367-4803.
Gibbs, Daniel J., Md Isa, Nurulhikma, Movahedi, Mahsa, Lozano-Juste, Jorge, Mendiondo, Guillermina M., Berckhan, Sophie, MarΓn-de la Rosa, Nora, Conde, Jorge Vicente , Correia, Cristina Sousa , Pearce, Simon P. et al.
(2014)
Nitric oxide sensing in plants is mediated by proteolytic control of group VII ERF transcription factors.
Molecular Cell, Volume 53
(Number 3).
pp. 369-379.
doi:10.1016/j.molcel.2013.12.020
ISSN 1097-2765.
Block, Anna, ToruΓ±o, Tania Y., Elowsky, Christian G., Zhang, Chi, Steinbrenner, Jens, Beynon, Jim and Alfano, James R. (2014) The Pseudomonas syringaetype III effector HopD1 suppresses effector-triggered immunity, localizes to the endoplasmic reticulum, and targets the Arabidopsis transcription factor NTL9. New Phytologist, Volume 201 (Number 4). pp. 1358-1370. doi:10.1111/nph.12626 ISSN 0028-646X.
TomΓ©, Daniel F. A., Steinbrenner, Jens and Beynon, Jim (2014) A growth quantification assay for hyaloperonospora arabidopsidis isolates in Arabidopsis thaliana. In: Plant-Pathogen Interactions. Methods in Molecular Biology, Volume 1127 . Humana Press, pp. 145-158. ISBN 9781627039857
Steinbrenner, Jens, Eldridge, Matthew, TomΓ©, Daniel F. A. and Beynon, Jim (2014) A simple and fast protocol for the protein complex immunoprecipitation (Co-IP) of effector : host protein complexes. In: Plant-Pathogen Interactions : Methods and Protocols. Methods in Molecular Biology, Volume 1127 . Berlin Heidelberg: Springer, pp. 195-211. ISBN 9781627039857
2013
Bechtold, Ulrike, Albihlal, Waleed S., Lawson, Tracy, Fryer, Michael J., Sparrow, Penelope A. C., Richard, François, Persad, Ramona, Bowden, Laura, Hickman, Richard D. G., Martin, Cathie, Beynon, Jim, Buchanan-Wollaston, Vicky, Baker, N. R., Morison, James I. L., Schoffl, Friedrich, Ott, Sascha and Mullineaux, Philip M. (2013) Arabidopsis HEAT SHOCK TRANSCRIPTION FACTORA1b overexpression enhances water productivity, resistance to drought, and infection. Journal of Experimental Botany, Volume 64 (Number 11). pp. 3467-3481. doi:10.1093/jxb/ert185 ISSN 0022-0957.
Hickman, Richard J., Hill, C., Penfold, Christopher A., Breeze, Emily, Bowden, Laura, Moore, Jonathan D., Zhang, Peijun, Jackson, Alison C., Cooke, Emma J., Bewicke-Copley, Findlay, Mead, A. (Andrew), Beynon, Jim, Wild, David L., Denby, Katherine J., Ott, Sascha and Buchanan-Wollaston, Vicky (2013) A local regulatory network around three NAC transcription factors in stress responses and senescence in Arabidopsis leaves. The Plant Journal, Volume 75 (Number 1). pp. 26-39. doi:10.1111/tpj.12194 ISSN 0960-7412.
Brown, Paul E., Baxter, Laura, Hickman, Richard J., Beynon, Jim, Moore, Jonathan D. and Ott, Sascha (2013) MEME-LaB : motif analysis in clusters. Bioinformatics . doi:10.1093/bioinformatics/btt248 ISSN 1367-4803.
McLellan, Hazel, Boevink, Petra C., Armstrong, Miles R., Pritchard, Leighton, GΓ³mez-Galera, Sonia, Morales, Juan, Whisson, Stephen C., Beynon, Jim and Birch, Paul R. J. (2013) An RxLR effector from phytophthora infestans prevents re-localisation of two plant NAC transcription factors from the endoplasmic reticulum to the nucleus. PLoS Pathogens, Volume 9 (Number 10). Article number e1003670. doi:10.1371/journal.ppat.1003670 ISSN 1553-7374.
2012
Baxter, Laura, Jironkin, Aleksey, Hickman, R. D. G., Moore, Jonathan D., Barrington, Christopher, Krusche, Peter, Dyer, Nigel, Buchanan-Wollaston, Vicky, Tiskin, Alexander, Beynon, Jim, Denby, Katherine J. and Ott, Sascha (2012) Conserved noncoding sequences highlight shared components of regulatory networks in dicotyledonous plants. The Plant Cell, Vol.24 (No.10). pp. 3949-3965. doi:10.1105/tpc.112.103010 ISSN 1040-4651.
Windram, Oliver P., Madhou, Priyadharshini, McHattie, Stuart, Hill, Claire, Hickman, Richard J., Cooke, Emma J., Jenkins, Dafyd J., Penfold, Christopher A., Baxter, Laura, Breeze, Emily et al.
(2012)
Arabidopsis defense against Botrytis cinerea : chronology and regulation deciphered by high-resolution temporal transcriptomic analysis.
The Plant Cell, Vol.24
(No.9).
pp. 3530-3557.
doi:10.1105/tpc.112.102046
ISSN 1040-4651.
Cevik, Volkan, Kidd, B. N., Zhang, Peijun, Hills, Claire E., Kiddle, Steven J., Denby, Katherine J., Holub, E. B., Cahill, D. M., Manners, J. M., Schenk, P. M., Beynon, Jim and Kazan, K. (2012) MEDIATOR25 acts as an integrative Hub for the regulation of jasmonate-responsive gene expression in arabidopsis. Plant Physiology, Volume 160 (Number 1). pp. 541-555. doi:10.1104/pp.112.202697 ISSN 0032-0889.
Lavagi, Irene, Estelle, Mark, Weckwerth, Wolfram, Beynon, Jim and Bastow, Ruth (2012) From bench to bountiful harvests : a road map for the next decade of Arabidopsis research. The Plant Cell, Vol.24 (No.6). pp. 2240-2247. doi:10.1105/tpc.112.096982 ISSN 1040-4651.
Cevik, Volkan, Kidd, B. N., Zhang, P., Hills, Claire E., Kiddle, Steven J., Denby, Katherine J., Holub, E. B., Cahill, D. M., Manners, J. M., Schenk, P. M., Beynon, Jim and Kazan, K. (2012) MEDIATOR25 acts as an integrative hub for the regulation of jasmonate-responsive gene expression in Arabidopsis. Plant Physiology, Vol.160 (No.1). pp. 541-555. doi:10.1104/pp.112.202697 ISSN 0032-0889.
2011
European Union Effectoromics Consortium (Including:
Mukhtar, M. S., Carvunis, A.-R., Dreze, M., Epple, P., Steinbrenner, Jens, Moore, Jonathan D., Tasan, M., Galli, M., Hao, Tong, Nishimura, M. T. et al.
).
(2011)
Independently evolved virulence effectors converge onto hubs in a plant immune system network.
Science, Vol.333
(No.6042).
pp. 596-601.
doi:10.1126/science.1203659
ISSN 0036-8075.
Breeze, Emily, Harrison, Elizabeth, McHattie, Stuart, Hughes, Linda Karen, Hickman, Richard J., Hill, Claire, Kiddle, Steven J., Kim, Youn-sung, Penfold, Christopher A., Jenkins, Dafyd J. et al.
(2011)
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell, The, Vol.23
(No.3).
pp. 873-894.
doi:10.1105/tpc.111.083345
ISSN 1040-4651.
Bailey, Kate, Cevik, Volkan, Holton, Nicholas, Byrne-Richardson, Jane, Sohn, Kee-Hoon, Coates, Mary, Woods-TΓΆr, Alison, Aksoy, H. Murat, Hughes, L., Baxter, Laura, Jones, Jonathan D. G., Beynon, Jim, Holub, E. B. and TΓΆr, Mahmut (2011) Molecular cloning of ATR5Emoy2 from hyaloperonospora arabidopsidis, an avirulence determinant that triggers RPP5-mediated defense in Arabidopsis. Molecular Plant-Microbe Interactions, Vol.24 (No.7). pp. 827-838. doi:10.1094/MPMI-12-10-0278 ISSN 0894-0282.
Fabro, Georgina, Steinbrenner, Jens, Coates, Mary, Ishaque, Naveed, Baxter, Laura, Studholme, David J., KΓΆrner, Evelyn, Allen, Rebecca L., Piquerez, Sophie J M, Rougon-Cardoso, Alejandra, Greenshields, David, Lei, Rita, Badel, Jorge L, Caillaud, Marie-Cecile, Sohn, Kee-Hoon, Van den Ackerveken, Guido, Parker, Jane E, Beynon, Jim and Jones, Jonathan D. G. (2011) Multiple candidate effectors from the oomycete pathogen Hyaloperonospora arabidopsidis suppress host plant immunity. PLoS pathogens, Vol.7 (No.11). Article No. e1002348. doi:10.1371/journal.ppat.1002348 ISSN 1553-7374.
Caillaud, Marie-CΓ©cile, Piquerez, Sophie J. M., Fabro, Georgina, Steinbrenner, Jens, Ishaque, Naveed, Beynon, Jim and Jones, Jonathan D. G. (2011) Subcellular localization of the Hpa RxLR effector repertoire identifies a tonoplast-associated protein HaRxL17 that confers enhanced plant susceptibility. Plant Journal, Vol.69 (No.2). pp. 252-265. doi:10.1111/j.1365-313X.2011.04787.x ISSN 0960-7412.
2010
Baxter, Laura, Tripathy, Sucheta, Ishaque, Naveed, Boot, Nico, Cabral, Adriana, Kemen, Eric, Thines, Marco, Ah-Fong, Audrey, Anderson, Ryan, Badejoko, Wole et al.
(2010)
Signatures of adaptation to obligate biotrophy in the hyaloperonospora arabidopsidis genome.
Science, Vol.330
(No.6010).
pp. 1549-1551.
doi:10.1126/science.1195203
ISSN 0036-8075.
Leene, Jelle van, Hollunder, Jens, Eeckhout, Dominique, Persiau, Geert, Slijke, Eveline van de, Stals, Hilde, Isterdael, Gert van, Verkest, Aurine, Neirynck, Sandy, Buffel, Yelle et al.
(2010)
Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana.
Molecular Systems Biology, Vol.6
(No.397).
doi:10.1038/msb.2010.53
ISSN 1744-4292.
Bastow, Ruth, Beynon, Jim, Estelle, Mark, Friesner, Joanna, Grotewold, Erich, Lavagi, Irene, Lindsey, Keith, Meyers, Blake, Provart, Nicholas, Benfey, Philip et al.
(2010)
An international bioinformatics infrastructure to underpin the Arabidopsis community.
Plant Cell, Vol.22
(No.8).
pp. 2530-2536.
ISSN 1040-4651
doi:10.1105/tpc.110.078519
Coates, Mary E. and Beynon, Jim (2010) Hyaloperonospora arabidopsidis as a pathogen model. Annual Review of Phytopathology, Vol.48 . pp. 329-345. ISSN 0066-4286 doi:10.1146/annurev-phyto-080508-094422
2009
Kiddle, Steven J., Windram, Oliver P., McHattie, Stuart, Mead, A. (Andrew), Beynon, Jim, Buchanan-Wollaston, Vicky, Denby, Katherine J. and Mukherjee, Sach (2009) Temporal clustering by affinity propagation reveals transcriptional modules in Arabidopsis thaliana. Bioinformatics, Vol.26 (No.3). pp. 355-362. doi:10.1093/bioinformatics/btp673 ISSN 1367-4811.
Haas, Brian J., Kamoun, Sophien, Zody, Michael C., Jiang, Rays H. Y., Handsaker, Robert E., Cano, Liliana M., Grabherr, Manfred, Kodira, Chinnappa D., Raffaele, Sylvain, Torto-Alalibo, Trudy et al.
(2009)
Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans.
Nature, Volume 461
(Number 7262).
pp. 393-398.
ISSN 0028-0836
doi:10.1038/nature08358
Hall, Sharon A., Allen, Rebecca L., Baumber, Rachel E., Baxter, Laura, Fisher, Kate, Bittner-Eddy , Peter D., Rose, Laura E., Holub, E. B. and Beynon, Jim (2009) Maintenance of genetic variation in plants and pathogens involves complex networks of gene-for-gene interactions. Molecular Plant Pathology, Vol.10 (No.4). pp. 449-457. doi:10.1111/j.1364-3703.2009.00544.x ISSN 1464-6722.
2008
Benhamed, Moussa, Martin-Magniette, Marie-Laure, Taconnat, Ludivine, Bitton, Frederique, Servet, Caroline, De Clercq, Rebecca, De Meyer, Bjorn, Buysschaert, Caroline, Rombauts, Stephane, Villarroel, Raimundo et al.
(2008)
Genome-scale Arabidopsis promoter array identifies targets of the histone acetyltransferase GCN5.
Plant Journal, Volume 56
(Number 3).
pp. 493-504.
doi:10.1111/j.1365-313X.2008.03606.x
ISSN 0960-7412.
Allen, Rebecca L., Meitz, Julia C., Baumber, Rachel E., Hall, Sharon A., Lee, Sarah C., Rose, Laura E. and Beynon, Jim (2008) Natural variation reveals key amino acids in a downy mildew effector that alters recognition specificity by an Arabidopsis resistance gene. Molecular Plant Pathology, Volume 9 (Number 4). pp. 511-523. doi:10.1111/j.1364-3703.2008.00481.x ISSN 1464-6722.
2007
Lim, Pyung Ok, Kim, Yumi, Breeze, Emily, Koo, Ja Choon, Woo, Hye Ryun, Ryu, Jong Sang, Park, Don Ha, Beynon, Jim, Tabrett, Alex, Buchanan-Wollaston, Vicky and Nam, Hong Gil (2007) Overexpression of a chromatin architecture-controlling AT-hook protein extends leaf longevity and increases the post-harvest storage life of plants. PLANT JOURNAL, 52 (6). pp. 1140-1153. doi:10.1111/j.1365-313X.2007.03317.x ISSN 0960-7412.
Sclep, Gert, Allemeersch, Joke, Liechti, Robin, De Meyer, BjΓΆrn, Beynon, Jim, Bhalerao, Rishikesh P., Moreau, Yves, Nietfeld, Wilfried, Renou, Jean-Pierre, Reymond, Philippe, Kuiper, Martin T.R. and Hilson, Pierre (2007) CATMA, a comprehensive genome-scale resource for silencing and transcript profiling of Arabidopsis genes. BMC Bioinformatics, Vol.8 (No.400). doi:10.1186/1471-2105-8-400 ISSN 1471-2105.
Allen, R., Baxter, Laura, Baumber, R., Bittner-Eddy, P., Coates, M., Fisher, K., Hall, S., Hughes, Linda Karen, Lee, S., Meitz, J., Rehmany, A., Rose, L. and Beynon, Jim (2007) The pathogenicity effectors of Hyaloperonospora parasitica. In: 2007 APS Annual Meeting, San Diego, CA, July 28 - August 1, 2007. Published in: Phytopathology, Vol.97 (No.7 Supplement). S146-S146. ISSN 0031-949X.
2004
Borhan, Mohammad H., Holub, E. B., Beynon, Jim, Rozwadowski, Kevin and Rimmer, Samuel Roger (2004) The Arabidopsis TIR-NB-LRR GeneRAC1 confers resistance to Albugo candida (white rust) and is dependent on EDS1 but not PAD4. Molecular Plant-Microbe Interactions, Volume 17 (Number 7). pp. 711-719. doi:10.1094/MPMI.2004.17.7.711 ISSN 0894-0282.
Rose, L. E., Bittner-Eddy , Peter D., Langley, Charles H, Michelmore, Richard W, Holub, E. B. and Beynon, Jim (2004) The maintenance of extreme amino acid diversity at the disease resistance gene, RPP13, in Arabidopsis thaliana. Genetics, Volume 166 (Number 3). pp. 1517-1527. doi:10.1534/genetics.166.3.1517 ISSN 0016-6731.
2000
Bittner-Eddy, Peter D., Crute, Ian R., Holub, E. B. and Beynon, Jim (2000) RPP13 is a simple locus in Arabidopsis thaliana for alleles that specify downy mildew resistance to different avirulence determinants in Peronospora parasitica. The Plant Journal, Volume 21 (Number 2). pp. 177-188. doi:10.1046/j.1365-313X.2000.00664.x ISSN 0960-7412.
McDowell, John M., Cuzick, Alayne, Can, Canan, Beynon, Jim, Dangl, Jeffery L. and Holub, E. B. (2000) Downy mildew (Peronospora parasitica) resistance genes in Arabidopsis vary in functional requirements for NDR1, EDS1, NPR1 and salicylic acid accumulation. The Plant Journal, Volume 22 (Number 6). pp. 523-529. doi:10.1046/j.1365-313X.2000.00771.x ISSN 0960-7412.
1999
Bittner-Eddy, Peter, Can, Canan, Gunn, Nick, Pinel, Matthieu, TΓΆr, Mahmut, Crute, Ian, Holub, E. B. and Beynon, Jim (1999) Genetic and physical mapping of the RPP13 Locus, in Arabidopsis, responsible for specific recognition of several peronospora parasitica (downy mildew) isolates. Molecular Plant-Microbe Interactions, Volume 12 (Number 9). pp. 792-802. doi:10.1094/MPMI.1999.12.9.792 ISSN 0894-0282.
1998
Botella, M. A., Parker, Jane E., Frost, L. N., Bittner-Eddy , Peter D., Beynon, Jim, Daniels, M. J., Holub, E. B. and Jones, J. G. S. (1998) Three genes of the Arabidopsis RPP1 complex resistance locus recognize distinct Peronospora parasitica avirulence determinants. The Plant Cell, Volume 10 (Number 11). pp. 1847-60. doi:10.1105/tpc.10.11.1847 ISSN 1040-4651.
Aarts, Mark G. M., Lintel Hekkert, Bas te, Holub, E. B., Beynon, Jim, Stiekema, Willem J. and Pereira, Andy (1998) Identification of R-Gene homologous DNA fragments genetically linked to disease resistance loci in Arabidopsis thaliana. Molecular Plant-Microbe Interactions, Volume 11 (Number 4). pp. 251-258. doi:10.1094/MPMI.1998.11.4.251 ISSN 0894-0282.
Speulman, Elly, Bouchez, David, Holub, E. B. and Beynon, Jim (1998) Disease resistance gene homologs correlate with disease resistance loci of Arabidopsis thaliana. The Plant Journal, Volume 14 (Number 4). pp. 467-474. doi:10.1046/j.1365-313X.1998.00138.x ISSN 0960-7412.
This list was generated on Fri Mar 29 15:03:55 2024 GMT.