Academy of Medical Sciences (Great Britain)

(2013) Multi-site genetic analysis of diffusion images and voxelwise heritability analysis : a pilot project of the ENIGMA–DTI working group. NeuroImage, Volume 81 . pp. 455-469. doi:10.1016/j.neuroimage.2013.04.061 ISSN 1053-8119.

Alzheimer's Association

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Alzheimer's Drug Discovery Foundation

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Arnold Foundation

Nichols, Thomas E., Das, Samir, Eickhoff, Simon B., Evans, Alan C., Glatard, Tristan, Hanke, Michael, Kriegeskorte, Nikolaus, Milham, Michael P., Poldrack, Russell A., Poline, Jean-Baptiste, Proal, Erika, Thirion, Bertrand, Van Essen, David C., White, Tonya and Yeo, B.T. Thomas (2017) Best practices in data analysis and sharing in neuroimaging using MRI. Nature Neuroscience, 20 (3). pp. 299-303. doi:10.1101/054262 ISSN 1097-6256.

Australian Research Council (ARC)

(2013) Multi-site genetic analysis of diffusion images and voxelwise heritability analysis : a pilot project of the ENIGMA–DTI working group. NeuroImage, Volume 81 . pp. 455-469. doi:10.1016/j.neuroimage.2013.04.061 ISSN 1053-8119.

BIRN Coordinating Center

Maumet, Camille, Auer, Tibor, Bowring, Alexander, Chen, Gang, Das, Samir, Flandin, Guillaume, Ghosh, Satrajit, Glatard, Tristan, Gorgolewski, Krzysztof J., Helmer, Karl G., Jenkinson, Mark, Keator, David B., Nichols, B. Nolan, Poline, Jean-Baptiste, Reynolds, Richard, Sochat, Vanessa, Turner, Jessica and Nichols, Thomas E. (2016) Sharing brain mapping statistical results with the neuroimaging data model. Scientific Data, 3 . 160102. doi:10.1038/sdata.2016.102 ISSN 2052-4463.

Barrow Neurological Institute

Winkler, Anderson M., Webster, Matthew A., Brooks, Jonathan C., Tracey, Irene, Smith, Stephen M. and Nichols, Thomas E. (2016) Non-parametric combination and related permutation tests for neuroimaging. Human Brain Mapping, 37 (4). pp. 1486-1511. doi:10.1002/hbm.23115 ISSN 1065-9471.

Bayerische Julius-Maximilians-Universität Würzburg [University of Würzburg]

Zeller, Mario, Müller, Alexander, Gutberlet, Marcel, Nichols, Thomas E., Hahn, Dietbert, Köstler, Herbert and Bartsch, Andreas J. (2013) Boosting BOLD fMRI by K-Space density weighted echo planar imaging. PLoS One, Volume 8 (Number 9). Article number e74501. doi:10.1371/journal.pone.0074501 ISSN 1932-6203.

BioClinica, Inc.

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Biogen Idec, Inc.

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Biotechnology and Biological Sciences Research Council (Great Britain) (BBSRC)

Pauli, Ruth, Bowring, Alexander, Reynolds, Richard, Chen, Gang, Nichols, Thomas E. and Maumet, Camille (2016) Exploring fMRI Results Space : 31 Variants of an fMRI Analysis in AFNI, FSL, and SPM. Frontiers in neuroinformatics, 10 . 24. doi:10.3389/fninf.2016.00024 ISSN 1662-5196.

Pernet, Cyril, Latinus, Marianne, Nichols, Thomas E. and Rousselet, Guillaume Alexis (2015) Cluster-based computational methods for mass univariate analyses of event-related brain potentials/fields : a simulation study. Journal of Neuroscience Methods, 250 . pp. 85-93. doi:10.1016/j.jneumeth.2014.08.003 ISSN 0165-0270.

Brain & Behavior Research Foundation (BBRF)

(2013) Multi-site genetic analysis of diffusion images and voxelwise heritability analysis : a pilot project of the ENIGMA–DTI working group. NeuroImage, Volume 81 . pp. 455-469. doi:10.1016/j.neuroimage.2013.04.061 ISSN 1053-8119.

Brain Network Recovery Group

Carter, Cameron S., Heckers, Stephan, Nichols, Thomas E., Pine, Daniel S. and Strother, Stephen (2008) Optimizing the design and analysis of clinical functional magnetic resonance imaging research studies. Biological Psychiatry, Vol.64 (No.10). pp. 842-849. doi:10.1016/j.biopsych.2008.06.014 ISSN 0006-3223.

BrightFocus Foundation

Ge, Tian, Nichols, Thomas E., Lee, Phil H., Holmes, Avram J., Roffman, Joshua L., Buckner, Randy L., Sabuncu , Mert R. and Smoller, Jordan W. (2015) Massively expedited genome-wide heritability analysis (MEGHA). Proceedings of the National Academy of Sciences of the United States of America, Volume 112 (Number 8). pp. 2479-2484. doi:10.1073/pnas.1415603112 ISSN 0027-8424 .

Bristol-Myers Squibb

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Canadian Institutes of Health Research (CIHR)

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Winkler, Anderson M., Webster, Matthew A., Brooks, Jonathan C., Tracey, Irene, Smith, Stephen M. and Nichols, Thomas E. (2016) Non-parametric combination and related permutation tests for neuroimaging. Human Brain Mapping, 37 (4). pp. 1486-1511. doi:10.1002/hbm.23115 ISSN 1065-9471.

Conte Center on Brain Programming in Adolescent Vulnerabilities

Maumet, Camille, Auer, Tibor, Bowring, Alexander, Chen, Gang, Das, Samir, Flandin, Guillaume, Ghosh, Satrajit, Glatard, Tristan, Gorgolewski, Krzysztof J., Helmer, Karl G., Jenkinson, Mark, Keator, David B., Nichols, B. Nolan, Poline, Jean-Baptiste, Reynolds, Richard, Sochat, Vanessa, Turner, Jessica and Nichols, Thomas E. (2016) Sharing brain mapping statistical results with the neuroimaging data model. Scientific Data, 3 . 160102. doi:10.1038/sdata.2016.102 ISSN 2052-4463.

Dana Foundation

Alzheimers Disease Neuroimaging Initiative (Including: Vounou, Maria, Nichols, Thomas E. and Montana, Giovanni). (2010) Discovering genetic associations with high-dimensional neuroimaging phenotypes: a sparse reduced-rank regression approach. NeuroImage, Vol.53 (No.3). pp. 1147-1159. doi:10.1016/j.neuroimage.2010.07.002 ISSN 1053-8119.

Dana Foundation

Silver, Matt, Montana, Giovanni and Nichols, Thomas E. (2011) False positives in neuroimaging genetics using voxel-based morphometry data. NeuroImage, Vol.54 (No.2). pp. 992-1000. doi:10.1016/j.neuroimage.2010.08.049 ISSN 10538119.

Deutsche Forschungsgemeinschaft (DFG)

Nichols, Thomas E., Das, Samir, Eickhoff, Simon B., Evans, Alan C., Glatard, Tristan, Hanke, Michael, Kriegeskorte, Nikolaus, Milham, Michael P., Poldrack, Russell A., Poline, Jean-Baptiste, Proal, Erika, Thirion, Bertrand, Van Essen, David C., White, Tonya and Yeo, B.T. Thomas (2017) Best practices in data analysis and sharing in neuroimaging using MRI. Nature Neuroscience, 20 (3). pp. 299-303. doi:10.1101/054262 ISSN 1097-6256.

Eickhoff, Simon B., Nichols, Thomas E., Laird, Angela R., Hoffstaedter, Felix, Amunts, Katrin, Fox, Peter T., Bzdok, Danilo and Eickhoff, Claudia R. (2016) Behavior, sensitivity, and power of activation likelihood estimation characterized by massive empirical simulation. NeuroImage, 137 . pp. 70-85. doi:10.1016/j.neuroimage.2016.04.072 ISSN 1053-8119.

Zeller, Mario, Müller, Alexander, Gutberlet, Marcel, Nichols, Thomas E., Hahn, Dietbert, Köstler, Herbert and Bartsch, Andreas J. (2013) Boosting BOLD fMRI by K-Space density weighted echo planar imaging. PLoS One, Volume 8 (Number 9). Article number e74501. doi:10.1371/journal.pone.0074501 ISSN 1932-6203.

Dr Hadwen Trust

Winkler, Anderson M., Webster, Matthew A., Brooks, Jonathan C., Tracey, Irene, Smith, Stephen M. and Nichols, Thomas E. (2016) Non-parametric combination and related permutation tests for neuroimaging. Human Brain Mapping, 37 (4). pp. 1486-1511. doi:10.1002/hbm.23115 ISSN 1065-9471.

Eisai, Inc.

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Elan Pharmaceuticals, Inc.

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Eli Lilly and Company

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Engineering and Physical Sciences Research Council (EPSRC)

Brettschneider, Julia, Thornby, John Albert, Nichols, Thomas E. and Kendall, W. S. (2014) Spatial analysis of dead pixels. Working Paper. Coventry, UK: University of Warwick. Centre for Research in Statistical Methodology. CRiSM Working Paper Series (Number 14-24). (Unpublished)

Sorrentino, Alberto, Johansen, Adam M., Aston, John A. D., Nichols, Thomas E. and Kendall, W. S. (2013) Dynamic filtering of static dipoles in magnetoencephalography. Annals of Applied Statistics, Volume 7 (Number 2). pp. 955-988. doi:10.1214/12-AOAS611 ISSN 1932-6157.

Alzheimers Disease Neuroimaging Initiative (Including: Vounou, Maria, Nichols, Thomas E. and Montana, Giovanni). (2010) Discovering genetic associations with high-dimensional neuroimaging phenotypes: a sparse reduced-rank regression approach. NeuroImage, Vol.53 (No.3). pp. 1147-1159. doi:10.1016/j.neuroimage.2010.07.002 ISSN 1053-8119.

Smith, Stephen M. and Nichols, Thomas E. (2009) Threshold-free cluster enhancement: addressing problems of smoothing, threshold dependence and localisation in cluster inference. NeuroImage, Vol.44 (No.1). pp. 83-98. doi:10.1016/j.neuroimage.2008.03.061 ISSN 1053-8119.

European Regional Development Fund (ERDF)

Nichols, Thomas E., Das, Samir, Eickhoff, Simon B., Evans, Alan C., Glatard, Tristan, Hanke, Michael, Kriegeskorte, Nikolaus, Milham, Michael P., Poldrack, Russell A., Poline, Jean-Baptiste, Proal, Erika, Thirion, Bertrand, Van Essen, David C., White, Tonya and Yeo, B.T. Thomas (2017) Best practices in data analysis and sharing in neuroimaging using MRI. Nature Neuroscience, 20 (3). pp. 299-303. doi:10.1101/054262 ISSN 1097-6256.

(2016) The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments. Scientific Data, 3 . 160044. doi:10.1038/sdata.2016.44 ISSN 2052-4463.

European Research Council (ERC)

Nichols, Thomas E., Das, Samir, Eickhoff, Simon B., Evans, Alan C., Glatard, Tristan, Hanke, Michael, Kriegeskorte, Nikolaus, Milham, Michael P., Poldrack, Russell A., Poline, Jean-Baptiste, Proal, Erika, Thirion, Bertrand, Van Essen, David C., White, Tonya and Yeo, B.T. Thomas (2017) Best practices in data analysis and sharing in neuroimaging using MRI. Nature Neuroscience, 20 (3). pp. 299-303. doi:10.1101/054262 ISSN 1097-6256.

F. Hoffmann-La Roche & Co. (FHLRCo.)

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Function Biomedical Informatics Re-search Network

Maumet, Camille, Auer, Tibor, Bowring, Alexander, Chen, Gang, Das, Samir, Flandin, Guillaume, Ghosh, Satrajit, Glatard, Tristan, Gorgolewski, Krzysztof J., Helmer, Karl G., Jenkinson, Mark, Keator, David B., Nichols, B. Nolan, Poline, Jean-Baptiste, Reynolds, Richard, Sochat, Vanessa, Turner, Jessica and Nichols, Thomas E. (2016) Sharing brain mapping statistical results with the neuroimaging data model. Scientific Data, 3 . 160102. doi:10.1038/sdata.2016.102 ISSN 2052-4463.

GE Healthcare

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Genentech, Inc.

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Germany. Bundesstaat. Saxony-Anhalt

Nichols, Thomas E., Das, Samir, Eickhoff, Simon B., Evans, Alan C., Glatard, Tristan, Hanke, Michael, Kriegeskorte, Nikolaus, Milham, Michael P., Poldrack, Russell A., Poline, Jean-Baptiste, Proal, Erika, Thirion, Bertrand, Van Essen, David C., White, Tonya and Yeo, B.T. Thomas (2017) Best practices in data analysis and sharing in neuroimaging using MRI. Nature Neuroscience, 20 (3). pp. 299-303. doi:10.1101/054262 ISSN 1097-6256.

GlaxoSmithKline

Winkler, Anderson M., Webster, Matthew A., Brooks, Jonathan C., Tracey, Irene, Smith, Stephen M. and Nichols, Thomas E. (2016) Non-parametric combination and related permutation tests for neuroimaging. Human Brain Mapping, 37 (4). pp. 1486-1511. doi:10.1002/hbm.23115 ISSN 1065-9471.

Pavlovic, Dragana M., Vértes, Petra E., Bullmore, Edward T., Schafer, William R. and Nichols, Thomas E. (2014) Stochastic blockmodeling of the modules and core of the caenorhabditis elegans connectome. PLoS One, Volume 9 (Number 7). Article number e97584. doi:10.1371/journal.pone.0097584 ISSN 1932-6203.

(2012) Genetic variation in GOLM1 and prefrontal cortical volume in Alzheimer's disease. Neurobiology of Aging, Vol.33 (No.3). pp. 457-465. doi:10.1016/j.neurobiolaging.2010.04.018 ISSN 0197-4580.

Comley, Robert A., Cervenka, Simon, Palhagen, Sven E., Panagiotidis, Georgios, Matthews, Julian C., Lai, Robert Y., Halldin, Christer, Farde, Lars, Nichols, Thomas E. and Whitcher, Brandon J. (2012) A comparison of gray matter density in restless legs syndrome patients and matched controls using voxel-based morphometry. Journal of Neuroimaging, Vol.22 (No.1). pp. 28-32. doi:10.1111/j.1552-6569.2010.00536.x ISSN 1051-2284.

Dixson, Luanna, Ridler, Khanum, Nichols, Thomas E., Saemann, Philipp G., Auer, Dorothee P., Holsboer, Florian, Muglia, Pierandrea, Matthews, Paul M. and Inkster, Becky (2011) Thyroid hormone transporter genes and grey matter changes in patients with major depressive disorder and healthy controls. Psychoneuroendocrinology, Vol.36 (No.6). pp. 929-934. doi:10.1016/j.psyneuen.2010.12.002 ISSN 0306-4530.

GlaxoSmithKline (GSK)

Salimi-Khorshidi, Gholamreza, Nichols, Thomas E., Smith, Stephen M. and Woolrich, Mark W. (2011) Using gaussian-process regression for meta-analytic neuroimaging inference based on sparse observations. IEEE Transactions on Medical Imaging, Vol.30 (No.7). pp. 1401-1416. doi:10.1109/TMI.2011.2122341 ISSN 0278-0062.

Salimi-Khorshidi, Gholamreza, Smith, Stephen M. and Nichols, Thomas E. (2011) Adjusting the effect of nonstationarity in cluster-based and TFCE inference. NeuroImage, Vol.54 (No.3). pp. 2006-2019. doi:10.1016/j.neuroimage.2010.09.088 ISSN 1053-8119.

(2010) A multi-center randomized proof-of-concept clinical trial applying [18F]FDG-PET for evaluation of metabolic therapy with rosiglitazone XR in mild to moderate Alzheimer's disease. Journal of Alzheimer's Disease, Vol.22 (No.4). pp. 1241-1256. doi:10.3233/JAD-2010-100939 ISSN 1875-8908.

Salimi-Khorshidi, Gholamreza, Smith, Stephen M., Keltner, John R., Wager, Tor D. and Nichols, Thomas E. (2009) Meta-analysis of neuroimaging data: a comparison of image-based and coordinate-based pooling of studies. NeuroImage, Vol.45 (No.3). pp. 810-823. doi:10.1016/j.neuroimage.2008.12.039 ISSN 1053-8119.

GlaxoSmithKline Clinical Imaging Centre

Alzheimers Disease Neuroimaging Initiative (Including: Vounou, Maria, Nichols, Thomas E. and Montana, Giovanni). (2010) Discovering genetic associations with high-dimensional neuroimaging phenotypes: a sparse reduced-rank regression approach. NeuroImage, Vol.53 (No.3). pp. 1147-1159. doi:10.1016/j.neuroimage.2010.07.002 ISSN 1053-8119.

Guy's & St. Thomas' Hospital Trust. Charitable Foundation

Ginestet, Cedric E., Nichols, Thomas E., Bullmore, Edward T. and Simmons, Andrew (2011) Brain network analysis : separating cost from topology using cost-integration. PLoS ONE, Vol.6 (No.7). Article: e21570. doi:10.1371/journal.pone.0021570 ISSN 1932-6203.

Hermann von Helmholtz-Gemeinschaft Deutscher Forschungszentren (HGF)

Eickhoff, Simon B., Nichols, Thomas E., Laird, Angela R., Hoffstaedter, Felix, Amunts, Katrin, Fox, Peter T., Bzdok, Danilo and Eickhoff, Claudia R. (2016) Behavior, sensitivity, and power of activation likelihood estimation characterized by massive empirical simulation. NeuroImage, 137 . pp. 70-85. doi:10.1016/j.neuroimage.2016.04.072 ISSN 1053-8119.

Higher Education Funding Council for England (HEFCE)

Sorrentino, Alberto, Johansen, Adam M., Aston, John A. D., Nichols, Thomas E. and Kendall, W. S. (2013) Dynamic filtering of static dipoles in magnetoencephalography. Annals of Applied Statistics, Volume 7 (Number 2). pp. 955-988. doi:10.1214/12-AOAS611 ISSN 1932-6157.

IXICO Ltd.

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Information Technology for European Advancement (ITEA3)

Eklund, Anders, Nichols, Thomas E. and Knutsson, Hans (2017) Reply to Brown and Behrmann, Cox, et al., and Kessler et al. : Data and code sharing is the way forward for fMRI. Proceedings of the National Academy of Sciences of the United States of America, 114 (7). E3374-E3375. doi:10.1073/pnas.1620285114

Innogenetics, N.V.

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

International Neuroinformatics Coordinating Facility (INCF)

Pauli, Ruth, Bowring, Alexander, Reynolds, Richard, Chen, Gang, Nichols, Thomas E. and Maumet, Camille (2016) Exploring fMRI Results Space : 31 Variants of an fMRI Analysis in AFNI, FSL, and SPM. Frontiers in neuroinformatics, 10 . 24. doi:10.3389/fninf.2016.00024 ISSN 1662-5196.

Gorgolewski, Krzysztof J., Varoquaux, Gael, Rivera, Gabriel, Schwarz, Yannick, Ghosh, Satrajit S., Maumet, Camille, Sochat, Vanessa V., Nichols, Thomas E., Poldrack, Russell A., Poline, Jean-Baptiste, Yarkoni, Tal and Margulies, Daniel (2015) NeuroVault.org : a web-based repository for collecting and sharing unthresholded statistical maps of the human brain. Frontiers in neuroinformatics, 9 . pp. 1-9. 8. doi:10.3389/fninf.2015.00008 ISSN 1662-5196.

International Neuroinformatics Coordinating Facility (INCF)

(2016) The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments. Scientific Data, 3 . 160044. doi:10.1038/sdata.2016.44 ISSN 2052-4463.

James S. McDonnell Foundation

Carter, Cameron S., Heckers, Stephan, Nichols, Thomas E., Pine, Daniel S. and Strother, Stephen (2008) Optimizing the design and analysis of clinical functional magnetic resonance imaging research studies. Biological Psychiatry, Vol.64 (No.10). pp. 842-849. doi:10.1016/j.biopsych.2008.06.014 ISSN 0006-3223.

Janssen Alzheimer Immunotherapy Research & Development, LLC.

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Johnson & Johnson. Pharmaceutical Research & Development

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Laura and John Arnold Foundation

Maumet, Camille, Auer, Tibor, Bowring, Alexander, Chen, Gang, Das, Samir, Flandin, Guillaume, Ghosh, Satrajit, Glatard, Tristan, Gorgolewski, Krzysztof J., Helmer, Karl G., Jenkinson, Mark, Keator, David B., Nichols, B. Nolan, Poline, Jean-Baptiste, Reynolds, Richard, Sochat, Vanessa, Turner, Jessica and Nichols, Thomas E. (2016) Sharing brain mapping statistical results with the neuroimaging data model. Scientific Data, 3 . 160102. doi:10.1038/sdata.2016.102 ISSN 2052-4463.

(2016) The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments. Scientific Data, 3 . 160044. doi:10.1038/sdata.2016.44 ISSN 2052-4463.

Ludmer Centre for Neuroinformatics and Mental Health

Nichols, Thomas E., Das, Samir, Eickhoff, Simon B., Evans, Alan C., Glatard, Tristan, Hanke, Michael, Kriegeskorte, Nikolaus, Milham, Michael P., Poldrack, Russell A., Poline, Jean-Baptiste, Proal, Erika, Thirion, Bertrand, Van Essen, David C., White, Tonya and Yeo, B.T. Thomas (2017) Best practices in data analysis and sharing in neuroimaging using MRI. Nature Neuroscience, 20 (3). pp. 299-303. doi:10.1101/054262 ISSN 1097-6256.

Maumet, Camille, Auer, Tibor, Bowring, Alexander, Chen, Gang, Das, Samir, Flandin, Guillaume, Ghosh, Satrajit, Glatard, Tristan, Gorgolewski, Krzysztof J., Helmer, Karl G., Jenkinson, Mark, Keator, David B., Nichols, B. Nolan, Poline, Jean-Baptiste, Reynolds, Richard, Sochat, Vanessa, Turner, Jessica and Nichols, Thomas E. (2016) Sharing brain mapping statistical results with the neuroimaging data model. Scientific Data, 3 . 160102. doi:10.1038/sdata.2016.102 ISSN 2052-4463.

Marie Curie Initial Training Networks (ITN)

Winkler, Anderson M., Webster, Matthew A., Brooks, Jonathan C., Tracey, Irene, Smith, Stephen M. and Nichols, Thomas E. (2016) Non-parametric combination and related permutation tests for neuroimaging. Human Brain Mapping, 37 (4). pp. 1486-1511. doi:10.1002/hbm.23115 ISSN 1065-9471.

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Marie Curie Intra-European Fellowship (IEF)

Sorrentino, Alberto, Johansen, Adam M., Aston, John A. D., Nichols, Thomas E. and Kendall, W. S. (2013) Dynamic filtering of static dipoles in magnetoencephalography. Annals of Applied Statistics, Volume 7 (Number 2). pp. 955-988. doi:10.1214/12-AOAS611 ISSN 1932-6157.

Massachusetts General Hospital. Center for Functional Neuroimaging Technologies

Ge, Tian, Nichols, Thomas E., Lee, Phil H., Holmes, Avram J., Roffman, Joshua L., Buckner, Randy L., Sabuncu , Mert R. and Smoller, Jordan W. (2015) Massively expedited genome-wide heritability analysis (MEGHA). Proceedings of the National Academy of Sciences of the United States of America, Volume 112 (Number 8). pp. 2479-2484. doi:10.1073/pnas.1415603112 ISSN 0027-8424 .

Max-Planck-Gesellschaft zur Förderung der Wissenschaften [Max Planck Society for the Advancement of Science]

Gorgolewski, Krzysztof J., Varoquaux, Gael, Rivera, Gabriel, Schwarz, Yannick, Ghosh, Satrajit S., Maumet, Camille, Sochat, Vanessa V., Nichols, Thomas E., Poldrack, Russell A., Poline, Jean-Baptiste, Yarkoni, Tal and Margulies, Daniel (2015) NeuroVault.org : a web-based repository for collecting and sharing unthresholded statistical maps of the human brain. Frontiers in neuroinformatics, 9 . pp. 1-9. 8. doi:10.3389/fninf.2015.00008 ISSN 1662-5196.

Medical Research Council (Great Britain) (MRC)

Nichols, Thomas E., Das, Samir, Eickhoff, Simon B., Evans, Alan C., Glatard, Tristan, Hanke, Michael, Kriegeskorte, Nikolaus, Milham, Michael P., Poldrack, Russell A., Poline, Jean-Baptiste, Proal, Erika, Thirion, Bertrand, Van Essen, David C., White, Tonya and Yeo, B.T. Thomas (2017) Best practices in data analysis and sharing in neuroimaging using MRI. Nature Neuroscience, 20 (3). pp. 299-303. doi:10.1101/054262 ISSN 1097-6256.

Maumet, Camille, Auer, Tibor, Bowring, Alexander, Chen, Gang, Das, Samir, Flandin, Guillaume, Ghosh, Satrajit, Glatard, Tristan, Gorgolewski, Krzysztof J., Helmer, Karl G., Jenkinson, Mark, Keator, David B., Nichols, B. Nolan, Poline, Jean-Baptiste, Reynolds, Richard, Sochat, Vanessa, Turner, Jessica and Nichols, Thomas E. (2016) Sharing brain mapping statistical results with the neuroimaging data model. Scientific Data, 3 . 160102. doi:10.1038/sdata.2016.102 ISSN 2052-4463.

(2016) The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments. Scientific Data, 3 . 160044. doi:10.1038/sdata.2016.44 ISSN 2052-4463.

Winkler, Anderson M., Webster, Matthew A., Brooks, Jonathan C., Tracey, Irene, Smith, Stephen M. and Nichols, Thomas E. (2016) Non-parametric combination and related permutation tests for neuroimaging. Human Brain Mapping, 37 (4). pp. 1486-1511. doi:10.1002/hbm.23115 ISSN 1065-9471.

The IMAGEN consortium (Including:

). (2014) Correction: Global genetic variations predict brain response to faces. PLoS Genetics, Volume 10 (Number 10). Article number e1004802. doi:10.1371/journal.pgen.1004802 ISSN 1553-7390.

Pavlovic, Dragana M., Vértes, Petra E., Bullmore, Edward T., Schafer, William R. and Nichols, Thomas E. (2014) Stochastic blockmodeling of the modules and core of the caenorhabditis elegans connectome. PLoS One, Volume 9 (Number 7). Article number e97584. doi:10.1371/journal.pone.0097584 ISSN 1932-6203.

Sorrentino, Alberto, Johansen, Adam M., Aston, John A. D., Nichols, Thomas E. and Kendall, W. S. (2013) Dynamic filtering of static dipoles in magnetoencephalography. Annals of Applied Statistics, Volume 7 (Number 2). pp. 955-988. doi:10.1214/12-AOAS611 ISSN 1932-6157.

Medical Research Council (Singapore) (MRC)

Nichols, Thomas E., Das, Samir, Eickhoff, Simon B., Evans, Alan C., Glatard, Tristan, Hanke, Michael, Kriegeskorte, Nikolaus, Milham, Michael P., Poldrack, Russell A., Poline, Jean-Baptiste, Proal, Erika, Thirion, Bertrand, Van Essen, David C., White, Tonya and Yeo, B.T. Thomas (2017) Best practices in data analysis and sharing in neuroimaging using MRI. Nature Neuroscience, 20 (3). pp. 299-303. doi:10.1101/054262 ISSN 1097-6256.

Medpace, Inc.

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Merck & Co.

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Meso Scale Diagnostics, LLC.

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Morphometry Biomedical Informatics Research Network

Maumet, Camille, Auer, Tibor, Bowring, Alexander, Chen, Gang, Das, Samir, Flandin, Guillaume, Ghosh, Satrajit, Glatard, Tristan, Gorgolewski, Krzysztof J., Helmer, Karl G., Jenkinson, Mark, Keator, David B., Nichols, B. Nolan, Poline, Jean-Baptiste, Reynolds, Richard, Sochat, Vanessa, Turner, Jessica and Nichols, Thomas E. (2016) Sharing brain mapping statistical results with the neuroimaging data model. Scientific Data, 3 . 160102. doi:10.1038/sdata.2016.102 ISSN 2052-4463.

National Alliance for Research into Schizophrenia and Affective Disorders (NIRSAD) (U.S.)

Carter, Cameron S., Heckers, Stephan, Nichols, Thomas E., Pine, Daniel S. and Strother, Stephen (2008) Optimizing the design and analysis of clinical functional magnetic resonance imaging research studies. Biological Psychiatry, Vol.64 (No.10). pp. 842-849. doi:10.1016/j.biopsych.2008.06.014 ISSN 0006-3223.

National Centre for Research Resources (NCRR) (US)

Pantazis, Dimitrios, Simpson, Gregory V., Weber, Darren L., Dale, Corby Leslie, Nichols, Thomas E. and Leahy, Richard M. (2009) A novel ANCOVA design for analysis of MEG data with application to a visual attention study. NeuroImage, Vol.44 (No.1). pp. 164-174. doi:10.1016/j.neuroimage.2008.07.012 ISSN 1053-8119.

National Health and Medical Research Council (Australia) (NHMRC)

(2013) Multi-site genetic analysis of diffusion images and voxelwise heritability analysis : a pilot project of the ENIGMA–DTI working group. NeuroImage, Volume 81 . pp. 455-469. doi:10.1016/j.neuroimage.2013.04.061 ISSN 1053-8119.

National Institute for Biomedical Engineering and Bioimaging (NIBIB) (US)

Pantazis, Dimitrios, Simpson, Gregory V., Weber, Darren L., Dale, Corby Leslie, Nichols, Thomas E. and Leahy, Richard M. (2009) A novel ANCOVA design for analysis of MEG data with application to a visual attention study. NeuroImage, Vol.44 (No.1). pp. 164-174. doi:10.1016/j.neuroimage.2008.07.012 ISSN 1053-8119.

National Institute for Health Research (Great Britain) (NIHR)

The IMAGEN consortium (Including:

). (2014) Correction: Global genetic variations predict brain response to faces. PLoS Genetics, Volume 10 (Number 10). Article number e1004802. doi:10.1371/journal.pgen.1004802 ISSN 1553-7390.

Pavlovic, Dragana M., Vértes, Petra E., Bullmore, Edward T., Schafer, William R. and Nichols, Thomas E. (2014) Stochastic blockmodeling of the modules and core of the caenorhabditis elegans connectome. PLoS One, Volume 9 (Number 7). Article number e97584. doi:10.1371/journal.pone.0097584 ISSN 1932-6203.

Ginestet, Cedric E., Nichols, Thomas E., Bullmore, Edward T. and Simmons, Andrew (2011) Brain network analysis : separating cost from topology using cost-integration. PLoS ONE, Vol.6 (No.7). Article: e21570. doi:10.1371/journal.pone.0021570 ISSN 1932-6203.

National Institute of Biomedical Imaging and Bioengineering

Silver, Matt, Montana, Giovanni and Nichols, Thomas E. (2011) False positives in neuroimaging genetics using voxel-based morphometry data. NeuroImage, Vol.54 (No.2). pp. 992-1000. doi:10.1016/j.neuroimage.2010.08.049 ISSN 10538119.

National Institute of Biomedical Imaging and Bioengineering (U.S.)

Alzheimers Disease Neuroimaging Initiative (Including: Vounou, Maria, Nichols, Thomas E. and Montana, Giovanni). (2010) Discovering genetic associations with high-dimensional neuroimaging phenotypes: a sparse reduced-rank regression approach. NeuroImage, Vol.53 (No.3). pp. 1147-1159. doi:10.1016/j.neuroimage.2010.07.002 ISSN 1053-8119.

National Institute of Biomedical Imaging and Bioengineering (U.S.) (NIBIB)

Ge, Tian, Nichols, Thomas E., Lee, Phil H., Holmes, Avram J., Roffman, Joshua L., Buckner, Randy L., Sabuncu , Mert R. and Smoller, Jordan W. (2015) Massively expedited genome-wide heritability analysis (MEGHA). Proceedings of the National Academy of Sciences of the United States of America, Volume 112 (Number 8). pp. 2479-2484. doi:10.1073/pnas.1415603112 ISSN 0027-8424 .

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Kochunov, Peter, Glahn, David C., Nichols, Thomas E., Winkler, Anderson M., Hong, Elliot L., Holcomb, Henry H., Stein, Jason L., Thompson, Paul M., Curran, Joanne E., Carless, Melanie A., Olvera, Rene L., Johnson, Matthew P., Cole, Shelley A., Kochunov, Valeria, Kent, Jack and Blangero, John (2011) Genetic analysis of cortical thickness and fractional anisotropy of water diffusion in the brain. Frontiers in Neuroscience, Vol.5 . p. 120. doi:10.3389/fnins.2011.00120 ISSN 1662-4548.

Pantazis, Dimitrios, Nichols, Thomas E., Baillet, Sylvain and Leahy, Richard M. (2003) Spatiotemporal localization of significant activation in MEG using permutation tests. Lecture Notes in Computer Science, Vol.2732 . pp. 512-523. doi:10.1007/978-3-540-45087-0_43 ISSN 0302-9743.

National Institute of Mental Health (U.S.) (NIMH)

Nichols, Thomas E., Das, Samir, Eickhoff, Simon B., Evans, Alan C., Glatard, Tristan, Hanke, Michael, Kriegeskorte, Nikolaus, Milham, Michael P., Poldrack, Russell A., Poline, Jean-Baptiste, Proal, Erika, Thirion, Bertrand, Van Essen, David C., White, Tonya and Yeo, B.T. Thomas (2017) Best practices in data analysis and sharing in neuroimaging using MRI. Nature Neuroscience, 20 (3). pp. 299-303. doi:10.1101/054262 ISSN 1097-6256.

Maumet, Camille, Auer, Tibor, Bowring, Alexander, Chen, Gang, Das, Samir, Flandin, Guillaume, Ghosh, Satrajit, Glatard, Tristan, Gorgolewski, Krzysztof J., Helmer, Karl G., Jenkinson, Mark, Keator, David B., Nichols, B. Nolan, Poline, Jean-Baptiste, Reynolds, Richard, Sochat, Vanessa, Turner, Jessica and Nichols, Thomas E. (2016) Sharing brain mapping statistical results with the neuroimaging data model. Scientific Data, 3 . 160102. doi:10.1038/sdata.2016.102 ISSN 2052-4463.

Eickhoff, Simon B., Nichols, Thomas E., Laird, Angela R., Hoffstaedter, Felix, Amunts, Katrin, Fox, Peter T., Bzdok, Danilo and Eickhoff, Claudia R. (2016) Behavior, sensitivity, and power of activation likelihood estimation characterized by massive empirical simulation. NeuroImage, 137 . pp. 70-85. doi:10.1016/j.neuroimage.2016.04.072 ISSN 1053-8119.

(2016) The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments. Scientific Data, 3 . 160044. doi:10.1038/sdata.2016.44 ISSN 2052-4463.

Kochunov, Peter, Glahn, David C., Nichols, Thomas E., Winkler, Anderson M., Hong, Elliot L., Holcomb, Henry H., Stein, Jason L., Thompson, Paul M., Curran, Joanne E., Carless, Melanie A., Olvera, Rene L., Johnson, Matthew P., Cole, Shelley A., Kochunov, Valeria, Kent, Jack and Blangero, John (2011) Genetic analysis of cortical thickness and fractional anisotropy of water diffusion in the brain. Frontiers in Neuroscience, Vol.5 . p. 120. doi:10.3389/fnins.2011.00120 ISSN 1662-4548.

Carter, Cameron S., Heckers, Stephan, Nichols, Thomas E., Pine, Daniel S. and Strother, Stephen (2008) Optimizing the design and analysis of clinical functional magnetic resonance imaging research studies. Biological Psychiatry, Vol.64 (No.10). pp. 842-849. doi:10.1016/j.biopsych.2008.06.014 ISSN 0006-3223.

Wager, Tor D., Lindquist, Martin A., Nichols, Thomas E., Kober, Hedy and Van Snellenberg, Jared X. (2008) Evaluating the consistency and specificity of neuroimaging data using meta-analysis. NeuroImage, Vol.45 (No.1). S210-S221. doi:10.1016/j.neuroimage.2008.10.061 ISSN 1053-8119.

National Institute of Neurological Disorders and Stroke (NINDS) (US)

Pantazis, Dimitrios, Simpson, Gregory V., Weber, Darren L., Dale, Corby Leslie, Nichols, Thomas E. and Leahy, Richard M. (2009) A novel ANCOVA design for analysis of MEG data with application to a visual attention study. NeuroImage, Vol.44 (No.1). pp. 164-174. doi:10.1016/j.neuroimage.2008.07.012 ISSN 1053-8119.

National Institute of Neurological Disorders and Stroke (U.S.) (NINDS)

Maumet, Camille, Auer, Tibor, Bowring, Alexander, Chen, Gang, Das, Samir, Flandin, Guillaume, Ghosh, Satrajit, Glatard, Tristan, Gorgolewski, Krzysztof J., Helmer, Karl G., Jenkinson, Mark, Keator, David B., Nichols, B. Nolan, Poline, Jean-Baptiste, Reynolds, Richard, Sochat, Vanessa, Turner, Jessica and Nichols, Thomas E. (2016) Sharing brain mapping statistical results with the neuroimaging data model. Scientific Data, 3 . 160102. doi:10.1038/sdata.2016.102 ISSN 2052-4463.

Gonzalez-Castillo, Javier, Chen, Gang, Nichols, Thomas E. and Bandettini, Peter A. (2016) Variance decomposition for single-subject task-based fMRI activity estimates across many sessions. NeuroImage . doi:10.1016/j.neuroimage.2016.10.024 ISSN 1053-8119.

National Institute on Aging

Silver, Matt, Montana, Giovanni and Nichols, Thomas E. (2011) False positives in neuroimaging genetics using voxel-based morphometry data. NeuroImage, Vol.54 (No.2). pp. 992-1000. doi:10.1016/j.neuroimage.2010.08.049 ISSN 10538119.

National Institute on Aging (NIA)

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Alzheimers Disease Neuroimaging Initiative (Including: Vounou, Maria, Nichols, Thomas E. and Montana, Giovanni). (2010) Discovering genetic associations with high-dimensional neuroimaging phenotypes: a sparse reduced-rank regression approach. NeuroImage, Vol.53 (No.3). pp. 1147-1159. doi:10.1016/j.neuroimage.2010.07.002 ISSN 1053-8119.

National Institute on Alcohol Abuse and Alcoholism (U.S.)

(2016) The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments. Scientific Data, 3 . 160044. doi:10.1038/sdata.2016.44 ISSN 2052-4463.

National Institute on Drug Abuse (NIDA)

Yarkoni, Tal, Poldrack, Russell A., Nichols, Thomas E., Van Essen, David and Wager, Tor D. (2011) Large-scale automated synthesis of human functional neuroimaging data. Nature Methods, Vol.8 (No.8). pp. 665-670. doi:10.1038/nmeth.1635 ISSN 1548-7091.

National Institutes of Health

Silver, Matt, Montana, Giovanni and Nichols, Thomas E. (2011) False positives in neuroimaging genetics using voxel-based morphometry data. NeuroImage, Vol.54 (No.2). pp. 992-1000. doi:10.1016/j.neuroimage.2010.08.049 ISSN 10538119.

National Institutes of Health (U.S.) (NIH)

Gutierrez-Barragan, Felipe, Ithapu, Vamsi K., Hinrichs, Chris, Maumet, Camille, Johnson, Sterling C., Nichols, Thomas E. and Singh, Vikas (2017) Accelerating permutation testing in voxel-wise analysis through subspace tracking : a new plugin for SnPM. NeuroImage, 159 . pp. 79-98. doi:10.1016/j.neuroimage.2017.07.025 ISSN 1053-8119.

Nichols, Thomas E., Das, Samir, Eickhoff, Simon B., Evans, Alan C., Glatard, Tristan, Hanke, Michael, Kriegeskorte, Nikolaus, Milham, Michael P., Poldrack, Russell A., Poline, Jean-Baptiste, Proal, Erika, Thirion, Bertrand, Van Essen, David C., White, Tonya and Yeo, B.T. Thomas (2017) Best practices in data analysis and sharing in neuroimaging using MRI. Nature Neuroscience, 20 (3). pp. 299-303. doi:10.1101/054262 ISSN 1097-6256.

Maumet, Camille, Auer, Tibor, Bowring, Alexander, Chen, Gang, Das, Samir, Flandin, Guillaume, Ghosh, Satrajit, Glatard, Tristan, Gorgolewski, Krzysztof J., Helmer, Karl G., Jenkinson, Mark, Keator, David B., Nichols, B. Nolan, Poline, Jean-Baptiste, Reynolds, Richard, Sochat, Vanessa, Turner, Jessica and Nichols, Thomas E. (2016) Sharing brain mapping statistical results with the neuroimaging data model. Scientific Data, 3 . 160102. doi:10.1038/sdata.2016.102 ISSN 2052-4463.

Gonzalez-Castillo, Javier, Chen, Gang, Nichols, Thomas E. and Bandettini, Peter A. (2016) Variance decomposition for single-subject task-based fMRI activity estimates across many sessions. NeuroImage . doi:10.1016/j.neuroimage.2016.10.024 ISSN 1053-8119.

Pauli, Ruth, Bowring, Alexander, Reynolds, Richard, Chen, Gang, Nichols, Thomas E. and Maumet, Camille (2016) Exploring fMRI Results Space : 31 Variants of an fMRI Analysis in AFNI, FSL, and SPM. Frontiers in neuroinformatics, 10 . 24. doi:10.3389/fninf.2016.00024 ISSN 1662-5196.

(2016) The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments. Scientific Data, 3 . 160044. doi:10.1038/sdata.2016.44 ISSN 2052-4463.

Winkler, Anderson M., Webster, Matthew A., Brooks, Jonathan C., Tracey, Irene, Smith, Stephen M. and Nichols, Thomas E. (2016) Non-parametric combination and related permutation tests for neuroimaging. Human Brain Mapping, 37 (4). pp. 1486-1511. doi:10.1002/hbm.23115 ISSN 1065-9471.

Gorgolewski, Krzysztof J., Varoquaux, Gael, Rivera, Gabriel, Schwarz, Yannick, Ghosh, Satrajit S., Maumet, Camille, Sochat, Vanessa V., Nichols, Thomas E., Poldrack, Russell A., Poline, Jean-Baptiste, Yarkoni, Tal and Margulies, Daniel (2015) NeuroVault.org : a web-based repository for collecting and sharing unthresholded statistical maps of the human brain. Frontiers in neuroinformatics, 9 . pp. 1-9. 8. doi:10.3389/fninf.2015.00008 ISSN 1662-5196.

Ge, Tian, Nichols, Thomas E., Lee, Phil H., Holmes, Avram J., Roffman, Joshua L., Buckner, Randy L., Sabuncu , Mert R. and Smoller, Jordan W. (2015) Massively expedited genome-wide heritability analysis (MEGHA). Proceedings of the National Academy of Sciences of the United States of America, Volume 112 (Number 8). pp. 2479-2484. doi:10.1073/pnas.1415603112 ISSN 0027-8424 .

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

(2013) Multi-site genetic analysis of diffusion images and voxelwise heritability analysis : a pilot project of the ENIGMA–DTI working group. NeuroImage, Volume 81 . pp. 455-469. doi:10.1016/j.neuroimage.2013.04.061 ISSN 1053-8119.

Kang, Jian, Nichols, Thomas E., Johnson, Timothy D. and Wager, Tor D. (2011) Meta analysis of functional neuroimaging data via Bayesian spatial point processes. Journal of the American Statistical Association, Vol.106 (No.493). pp. 124-134. doi:10.1198/jasa.2011.ap09735 ISSN 0162-1459.

Alzheimers Disease Neuroimaging Initiative (Including: Vounou, Maria, Nichols, Thomas E. and Montana, Giovanni). (2010) Discovering genetic associations with high-dimensional neuroimaging phenotypes: a sparse reduced-rank regression approach. NeuroImage, Vol.53 (No.3). pp. 1147-1159. doi:10.1016/j.neuroimage.2010.07.002 ISSN 1053-8119.

Xu, L., Johnson, Timothy D., Nichols, Thomas E. and Nee, Derek E. (2009) Modeling inter-subject variability in fMRI activation location: a Bayesian hierarchical spatial model. Biometrics, Vol.65 (No.4). pp. 1041-1051. doi:10.1111/j.1541-0420.2008.01190.x ISSN 0006-341X.

National Library of Medicine (U.S.) (NLM)

Gutierrez-Barragan, Felipe, Ithapu, Vamsi K., Hinrichs, Chris, Maumet, Camille, Johnson, Sterling C., Nichols, Thomas E. and Singh, Vikas (2017) Accelerating permutation testing in voxel-wise analysis through subspace tracking : a new plugin for SnPM. NeuroImage, 159 . pp. 79-98. doi:10.1016/j.neuroimage.2017.07.025 ISSN 1053-8119.

National Science Foundation (U.S.) (NSF)

Gutierrez-Barragan, Felipe, Ithapu, Vamsi K., Hinrichs, Chris, Maumet, Camille, Johnson, Sterling C., Nichols, Thomas E. and Singh, Vikas (2017) Accelerating permutation testing in voxel-wise analysis through subspace tracking : a new plugin for SnPM. NeuroImage, 159 . pp. 79-98. doi:10.1016/j.neuroimage.2017.07.025 ISSN 1053-8119.

(2016) The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments. Scientific Data, 3 . 160044. doi:10.1038/sdata.2016.44 ISSN 2052-4463.

Gorgolewski, Krzysztof J., Varoquaux, Gael, Rivera, Gabriel, Schwarz, Yannick, Ghosh, Satrajit S., Maumet, Camille, Sochat, Vanessa V., Nichols, Thomas E., Poldrack, Russell A., Poline, Jean-Baptiste, Yarkoni, Tal and Margulies, Daniel (2015) NeuroVault.org : a web-based repository for collecting and sharing unthresholded statistical maps of the human brain. Frontiers in neuroinformatics, 9 . pp. 1-9. 8. doi:10.3389/fninf.2015.00008 ISSN 1662-5196.

Wager, Tor D., Lindquist, Martin A., Nichols, Thomas E., Kober, Hedy and Van Snellenberg, Jared X. (2008) Evaluating the consistency and specificity of neuroimaging data using meta-analysis. NeuroImage, Vol.45 (No.1). S210-S221. doi:10.1016/j.neuroimage.2008.10.061 ISSN 1053-8119.

National university of Singapore

Nichols, Thomas E., Das, Samir, Eickhoff, Simon B., Evans, Alan C., Glatard, Tristan, Hanke, Michael, Kriegeskorte, Nikolaus, Milham, Michael P., Poldrack, Russell A., Poline, Jean-Baptiste, Proal, Erika, Thirion, Bertrand, Van Essen, David C., White, Tonya and Yeo, B.T. Thomas (2017) Best practices in data analysis and sharing in neuroimaging using MRI. Nature Neuroscience, 20 (3). pp. 299-303. doi:10.1101/054262 ISSN 1097-6256.

Nederlandse Organisatie voor Wetenschappelijk Onderzoek.‏ Medische Wetenschappen (ZonMw)

Nichols, Thomas E., Das, Samir, Eickhoff, Simon B., Evans, Alan C., Glatard, Tristan, Hanke, Michael, Kriegeskorte, Nikolaus, Milham, Michael P., Poldrack, Russell A., Poline, Jean-Baptiste, Proal, Erika, Thirion, Bertrand, Van Essen, David C., White, Tonya and Yeo, B.T. Thomas (2017) Best practices in data analysis and sharing in neuroimaging using MRI. Nature Neuroscience, 20 (3). pp. 299-303. doi:10.1101/054262 ISSN 1097-6256.

NeuroRx Research

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Novartis Pharmaceuticals Corporation

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Pfizer Inc.

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Piramal Imaging

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Predictek, Inc.

Carter, Cameron S., Heckers, Stephan, Nichols, Thomas E., Pine, Daniel S. and Strother, Stephen (2008) Optimizing the design and analysis of clinical functional magnetic resonance imaging research studies. Biological Psychiatry, Vol.64 (No.10). pp. 842-849. doi:10.1016/j.biopsych.2008.06.014 ISSN 0006-3223.

Research Councils UK (RCUK)

Salimi-Khorshidi, Gholamreza, Nichols, Thomas E., Smith, Stephen M. and Woolrich, Mark W. (2011) Using gaussian-process regression for meta-analytic neuroimaging inference based on sparse observations. IEEE Transactions on Medical Imaging, Vol.30 (No.7). pp. 1401-1416. doi:10.1109/TMI.2011.2122341 ISSN 0278-0062.

Salimi-Khorshidi, Gholamreza, Smith, Stephen M. and Nichols, Thomas E. (2011) Adjusting the effect of nonstationarity in cluster-based and TFCE inference. NeuroImage, Vol.54 (No.3). pp. 2006-2019. doi:10.1016/j.neuroimage.2010.09.088 ISSN 1053-8119.

Salimi-Khorshidi, Gholamreza, Smith, Stephen M., Keltner, John R., Wager, Tor D. and Nichols, Thomas E. (2009) Meta-analysis of neuroimaging data: a comparison of image-based and coordinate-based pooling of studies. NeuroImage, Vol.45 (No.3). pp. 810-823. doi:10.1016/j.neuroimage.2008.12.039 ISSN 1053-8119.

Rotman Institute

Carter, Cameron S., Heckers, Stephan, Nichols, Thomas E., Pine, Daniel S. and Strother, Stephen (2008) Optimizing the design and analysis of clinical functional magnetic resonance imaging research studies. Biological Psychiatry, Vol.64 (No.10). pp. 842-849. doi:10.1016/j.biopsych.2008.06.014 ISSN 0006-3223.

Saxony-Anhalt (Germany)

(2016) The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments. Scientific Data, 3 . 160044. doi:10.1038/sdata.2016.44 ISSN 2052-4463.

Scottish Funding Council (SFC)

(2013) Multi-site genetic analysis of diffusion images and voxelwise heritability analysis : a pilot project of the ENIGMA–DTI working group. NeuroImage, Volume 81 . pp. 455-469. doi:10.1016/j.neuroimage.2013.04.061 ISSN 1053-8119.

Servier

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Seventh Framework Programme (European Commission) (FP7)

Nichols, Thomas E., Das, Samir, Eickhoff, Simon B., Evans, Alan C., Glatard, Tristan, Hanke, Michael, Kriegeskorte, Nikolaus, Milham, Michael P., Poldrack, Russell A., Poline, Jean-Baptiste, Proal, Erika, Thirion, Bertrand, Van Essen, David C., White, Tonya and Yeo, B.T. Thomas (2017) Best practices in data analysis and sharing in neuroimaging using MRI. Nature Neuroscience, 20 (3). pp. 299-303. doi:10.1101/054262 ISSN 1097-6256.

Eickhoff, Simon B., Nichols, Thomas E., Laird, Angela R., Hoffstaedter, Felix, Amunts, Katrin, Fox, Peter T., Bzdok, Danilo and Eickhoff, Claudia R. (2016) Behavior, sensitivity, and power of activation likelihood estimation characterized by massive empirical simulation. NeuroImage, 137 . pp. 70-85. doi:10.1016/j.neuroimage.2016.04.072 ISSN 1053-8119.

Sorrentino, Alberto, Johansen, Adam M., Aston, John A. D., Nichols, Thomas E. and Kendall, W. S. (2013) Dynamic filtering of static dipoles in magnetoencephalography. Annals of Applied Statistics, Volume 7 (Number 2). pp. 955-988. doi:10.1214/12-AOAS611 ISSN 1932-6157.

Singapore. Ministry of Education

Nichols, Thomas E., Das, Samir, Eickhoff, Simon B., Evans, Alan C., Glatard, Tristan, Hanke, Michael, Kriegeskorte, Nikolaus, Milham, Michael P., Poldrack, Russell A., Poline, Jean-Baptiste, Proal, Erika, Thirion, Bertrand, Van Essen, David C., White, Tonya and Yeo, B.T. Thomas (2017) Best practices in data analysis and sharing in neuroimaging using MRI. Nature Neuroscience, 20 (3). pp. 299-303. doi:10.1101/054262 ISSN 1097-6256.

Sixth Framework Programme (European Commission) (FP6)

The IMAGEN consortium (Including:

). (2014) Correction: Global genetic variations predict brain response to faces. PLoS Genetics, Volume 10 (Number 10). Article number e1004802. doi:10.1371/journal.pgen.1004802 ISSN 1553-7390.

South London and Maudsley NHS Trust

Ginestet, Cedric E., Nichols, Thomas E., Bullmore, Edward T. and Simmons, Andrew (2011) Brain network analysis : separating cost from topology using cost-integration. PLoS ONE, Vol.6 (No.7). Article: e21570. doi:10.1371/journal.pone.0021570 ISSN 1932-6203.

Statens råd för byggnadsforskning (Sweden) [Swedish Research Council]

Eklund, Anders, Nichols, Thomas E. and Knutsson, Hans (2017) Reply to Brown and Behrmann, Cox, et al., and Kessler et al. : Data and code sharing is the way forward for fMRI. Proceedings of the National Academy of Sciences of the United States of America, 114 (7). E3374-E3375. doi:10.1073/pnas.1620285114

Synarc Inc.

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

Takeda Yakuhin Kōgyō Kabushiki Kaisha

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

US National Institute of Mental Health (NIMH)

Yarkoni, Tal, Poldrack, Russell A., Nichols, Thomas E., Van Essen, David and Wager, Tor D. (2011) Large-scale automated synthesis of human functional neuroimaging data. Nature Methods, Vol.8 (No.8). pp. 665-670. doi:10.1038/nmeth.1635 ISSN 1548-7091.

US National Institute of Nursing Research (NINR)

Yarkoni, Tal, Poldrack, Russell A., Nichols, Thomas E., Van Essen, David and Wager, Tor D. (2011) Large-scale automated synthesis of human functional neuroimaging data. Nature Methods, Vol.8 (No.8). pp. 665-670. doi:10.1038/nmeth.1635 ISSN 1548-7091.

US National Institutes of Health (NIH)

Yarkoni, Tal, Poldrack, Russell A., Nichols, Thomas E., Van Essen, David and Wager, Tor D. (2011) Large-scale automated synthesis of human functional neuroimaging data. Nature Methods, Vol.8 (No.8). pp. 665-670. doi:10.1038/nmeth.1635 ISSN 1548-7091.

United States. Department of Defense (DoD)

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

University of Warwick. Centre for Analytical Science

Minas, Giorgos, Rigat, Fabio, Nichols, Thomas E., Aston, John A. D. and Stallard, Nigel (2012) A hybrid procedure for detecting global treatment effects in multivariate clinical trials : theory and applications to fMRI studies. Statistics in Medicine, Vol.31 (No.3). pp. 253-268. doi:10.1002/sim.4395 ISSN 0277-6715.

University of Wisconsin--Madison

Gutierrez-Barragan, Felipe, Ithapu, Vamsi K., Hinrichs, Chris, Maumet, Camille, Johnson, Sterling C., Nichols, Thomas E. and Singh, Vikas (2017) Accelerating permutation testing in voxel-wise analysis through subspace tracking : a new plugin for SnPM. NeuroImage, 159 . pp. 79-98. doi:10.1016/j.neuroimage.2017.07.025 ISSN 1053-8119.

VA Merit Review

Albin, R. L., Koeppe, Robert Allen, Wernette, K., Zhuang, W., Nichols, Thomas E., Kilbourn, M. R. and Frey, K. A. (2009) Striatal [11C]dihydrotetrabenazine and [11C]methylphenidate binding in Tourette syndrome. Neurology, Vol.72 (No.16). pp. 1390-1396. doi:10.1212/WNL.0b013e3181a187dd ISSN 0028-3878.

Wellcome Trust

Silver, Matt, Montana, Giovanni and Nichols, Thomas E. (2011) False positives in neuroimaging genetics using voxel-based morphometry data. NeuroImage, Vol.54 (No.2). pp. 992-1000. doi:10.1016/j.neuroimage.2010.08.049 ISSN 10538119.

Wellcome Trust (London, England)

Gutierrez-Barragan, Felipe, Ithapu, Vamsi K., Hinrichs, Chris, Maumet, Camille, Johnson, Sterling C., Nichols, Thomas E. and Singh, Vikas (2017) Accelerating permutation testing in voxel-wise analysis through subspace tracking : a new plugin for SnPM. NeuroImage, 159 . pp. 79-98. doi:10.1016/j.neuroimage.2017.07.025 ISSN 1053-8119.

Eklund, Anders, Nichols, Thomas E. and Knutsson, Hans (2017) Reply to Brown and Behrmann, Cox, et al., and Kessler et al. : Data and code sharing is the way forward for fMRI. Proceedings of the National Academy of Sciences of the United States of America, 114 (7). E3374-E3375. doi:10.1073/pnas.1620285114

Nichols, Thomas E., Das, Samir, Eickhoff, Simon B., Evans, Alan C., Glatard, Tristan, Hanke, Michael, Kriegeskorte, Nikolaus, Milham, Michael P., Poldrack, Russell A., Poline, Jean-Baptiste, Proal, Erika, Thirion, Bertrand, Van Essen, David C., White, Tonya and Yeo, B.T. Thomas (2017) Best practices in data analysis and sharing in neuroimaging using MRI. Nature Neuroscience, 20 (3). pp. 299-303. doi:10.1101/054262 ISSN 1097-6256.

Maumet, Camille, Auer, Tibor, Bowring, Alexander, Chen, Gang, Das, Samir, Flandin, Guillaume, Ghosh, Satrajit, Glatard, Tristan, Gorgolewski, Krzysztof J., Helmer, Karl G., Jenkinson, Mark, Keator, David B., Nichols, B. Nolan, Poline, Jean-Baptiste, Reynolds, Richard, Sochat, Vanessa, Turner, Jessica and Nichols, Thomas E. (2016) Sharing brain mapping statistical results with the neuroimaging data model. Scientific Data, 3 . 160102. doi:10.1038/sdata.2016.102 ISSN 2052-4463.

Pauli, Ruth, Bowring, Alexander, Reynolds, Richard, Chen, Gang, Nichols, Thomas E. and Maumet, Camille (2016) Exploring fMRI Results Space : 31 Variants of an fMRI Analysis in AFNI, FSL, and SPM. Frontiers in neuroinformatics, 10 . 24. doi:10.3389/fninf.2016.00024 ISSN 1662-5196.

(2016) The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments. Scientific Data, 3 . 160044. doi:10.1038/sdata.2016.44 ISSN 2052-4463.

Winkler, Anderson M., Webster, Matthew A., Brooks, Jonathan C., Tracey, Irene, Smith, Stephen M. and Nichols, Thomas E. (2016) Non-parametric combination and related permutation tests for neuroimaging. Human Brain Mapping, 37 (4). pp. 1486-1511. doi:10.1002/hbm.23115 ISSN 1065-9471.

Ge, Tian, Nichols, Thomas E., Lee, Phil H., Holmes, Avram J., Roffman, Joshua L., Buckner, Randy L., Sabuncu , Mert R. and Smoller, Jordan W. (2015) Massively expedited genome-wide heritability analysis (MEGHA). Proceedings of the National Academy of Sciences of the United States of America, Volume 112 (Number 8). pp. 2479-2484. doi:10.1073/pnas.1415603112 ISSN 0027-8424 .

Pavlovic, Dragana M., Vértes, Petra E., Bullmore, Edward T., Schafer, William R. and Nichols, Thomas E. (2014) Stochastic blockmodeling of the modules and core of the caenorhabditis elegans connectome. PLoS One, Volume 9 (Number 7). Article number e97584. doi:10.1371/journal.pone.0097584 ISSN 1932-6203.

Guillaume, Bryan, Hua, Xue, Thompson, Paul M., Waldorp, Lourens and Nichols, Thomas E. (2014) Fast and accurate modelling of longitudinal and repeated measures neuroimaging data. NeuroImage, Volume 94 . pp. 287-302. doi:10.1016/j.neuroimage.2014.03.029 ISSN 1053-8119.

(2013) Multi-site genetic analysis of diffusion images and voxelwise heritability analysis : a pilot project of the ENIGMA–DTI working group. NeuroImage, Volume 81 . pp. 455-469. doi:10.1016/j.neuroimage.2013.04.061 ISSN 1053-8119.