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Journal Article
Smid, Andrei, Garforth, Sam, Obaid, Maryam, Bollons, Hannah and James, John R. (2023) Pre-T cell receptor localization and trafficking are independent of its signaling. Journal of Cell Biology, 222 (10). e202212106. doi:10.1083/jcb.202212106 ISSN 0021-9525.
Foo, Mathias, Kim, Jongrae and Bates, Declan (2019) Modelling and control of gene regulatory networks for perturbation mitigation. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 16 (2). pp. 583-595. doi:10.1109/TCBB.2017.2771775 ISSN 1545-5963.
Frenguelli, Bruno G. (2019) The purine salvage pathway and the restoration of cerebral ATP : implications for brain slice physiology and brain injury. Neurochemical Research, 44 (3). pp. 661-675. doi:10.1007/s11064-017-2386-6 ISSN 0364-3190.
Dangerfield, C. E., Whalley, A. Elizabeth, Hanley, N. and Gilligan, C. A. (2018) What a difference a stochastic process makes : epidemiological-based real options models of optimal treatment of disease. Environmental and Resource Economics, 70 (3). pp. 691-711. doi:10.1007/s10640-017-0168-x ISSN 0924-6460.
Jenner, Matthew, Kosol, Simone, Griffiths, Daniel, Prasongpholchai, Panward, Manzi, Lucio, Barrow, Andrew S., Moses, John E., Oldham, Neil J., Lewandowski, Jรณzef R. and Challis, Gregory L. (2018) Mechanism of intersubunit ketosynthaseโdehydratase interaction in polyketide synthases. Nature Chemical Biology, 14 . pp. 270-275. doi:10.1038/nchembio.2549 ISSN 1552-4450.
Eyice, รzge, Myronova, Natalia, Pol, Arjan, Carrion, Ornella, Todd, Jonathan, Smith, Tom J., Gurman, Stephen J., Cuthbertson, Adam, Mazard, Sophie, Mennink-Kersten, Monique A. S. H. , Bugg, Tim, Andersson, K. Kristoffer, Johnston, Andrew W. B., Op Den Camp, Huub J. M. and Schรคfer, Hendrik (2018) Bacterial SBP56 identified as a Cu-dependent methanethiol oxidase widely distributed in the biosphere. ISME Journal, 12 (1). 145-160 . doi:10.1038/ismej.2017.148 ISSN 1751-7362.
Lin, Ming, Egertovรก, Michaela, Zampronio, Cleidiane, Jones, Alexandra M. and Elphick, Maurice R. (2017) Pedal peptide/orcokinin-type neuropeptide signaling in a deuterostome : the anatomy and pharmacology of starfish myorelaxant peptide in Asterias rubens. Journal of Comparative Neurology, 525 (18). pp. 3890-3917. doi:10.1002/cne.24309 ISSN 0021-9967.
Tusco, Radu, Jacomin, Anne-Claire, Jain, Ashish, Penman, Bridget S., Bowitz Larsen, Kenneth, Johansen, Terje and Nezis, Ioannis P. (2017) Kenny mediates selective autophagic degradation of the IKK complex to control innate immune responses. Nature Communications, 8 . 1264 . doi:10.1038/s41467-017-01287-9 ISSN 2041-1723.
Lazutkaite, Greta, Soldร , Alice, Lossow, Kristina, Meyerhof, Wolfgang and Dale, Nicholas (2017) Amino acid sensing in hypothalamic tanycytes via umami taste receptors. Molecular Metabolism, 6 (11). pp. 1480-1492. doi:10.1016/j.molmet.2017.08.015 ISSN 2212-8778.
Millar, Robert, Rahmanpour, Rahman, Wei Jia Yuan, Eugenie, White, Catharine and Bugg, Tim (2017) Esterase EstK from Pseudomonas putida mt-2 : an enantioselective acetylesterase with activity for deacetylation of xylan and poly(vinylacetate). Biotechnology and Applied Biochemistry, 64 (6). pp. 803-809. ISSN 0885-4513.
Brignall, Ruth, Cauchy, Pierre, Bevington, Sarah L., Gorman, Bethany, Pisco, Angela O., Bagnall, James, Boddington, Christopher, Rowe, William, England, Hazel, Rich, Kevin, Schmidt, Lorraine, Dyer, Nigel P., Travis, Mark A., Ott, Sascha, Jackson, Dean A., Cockerill, Peter N. and Paszek, Pawel (2017) Integration of kinase and calcium signaling at the level of chromatin underlies inducible gene activation in T cells. The Journal of Immunology, 199 (8). pp. 2652-2667. ji1602033. doi:10.4049/jimmunol.1602033 ISSN 0022-1767.
Diez, Rebecca, Richardson, Magnus J. E. and Wall, Mark J. (2017) Reducing extracellular Ca2+ induces adenosine release via equilibrative nucleoside transporters to provide negative feedback control of activity in the hippocampus. Frontiers in Neural Circuits, 11 . 75. doi:10.3389/fncir.2017.00075 ISSN 1662-5110.
Smith, Oliver , Palmer, Sarah A., Clapham, Alan J., Rose, Pamela, Liu, Yuan, Wang, Jun and Allaby, Robin G. (2017) Small RNA activity in archaeological barley shows novel germination inhibition in response to environment. Molecular Biology and Evolution, 34 (10). pp. 2555-2562. doi:10.1093/molbev/msx175 ISSN 0737-4038.
Davies, Laura R. and Neve, Paul (2017) Interpopulation variability and adaptive potential for reduced glyphosate sensitivity in Alopecurus myosuroides. Weed Research, 57 (5). pp. 323-332. doi:10.1111/wre.12264 ISSN 0043-1737.
Ancell, Henry and Pires-da Silva, Andreฬ Francisco (2017) Sex-specific lifespan and its evolution in nematodes. Seminars in Cell & Developmental Biology, 70 . pp. 122-129. doi:10.1016/j.semcdb.2017.05.012 ISSN 1084-9521.
Rodrigo, Guillermo, Prakash, Satya, Shen, Shensi, Majer, Eszter, Darรฒs, Josรฉ-Antonio and Jaramillo, Alfonso (2017) Model-based design of RNA hybridization networks implemented in living cells. Nucleic Acids Research, 45 (16). pp. 9797-9808. doi:10.1093/nar/gkx698 ISSN 0305-1048.
OโReilly, Michael W., Kempegowda, Punith, Walsh, Mark David, Taylor, Angela E., Manolopoulos, Konstantinos N., Allwood, J. William, Semple, Robert K., Hebenstreit, Daniel, Dunn, Warwick B., Tomlinson, Jeremy W. and Arlt, Wiebke (2017) AKR1C3-mediated adipose androgen generation drives lipotoxicity in women with polycystic ovary syndrome. The Journal of Clinical Endocrinology & Metabolism, 102 (9). pp. 3327-3339. doi:10.1210/jc.2017-00947 ISSN 0021-972X.
Jacomin, Anne-Claire, Samavedam, Siva, Charles, Hannah and Nezis, Ioannis P. (2017) iLIR@viral : a web resource for LIR motif-containing proteins in viruses. Autophagy, 13 (10). pp. 1782-1789. doi:10.1080/15548627.2017.1356978 ISSN 1554-8627.
Brodel, Andreas K., Jaramillo, Alfonso and Isalan, Mark (2017) Intracellular directed evolution of proteins from combinatorial libraries based on conditional phage replication. Nature Protocols, 12 (9). pp. 1830-1843. doi:10.1038/nprot.2017.084 ISSN 1750-2799.
Lidbury, Ian, Fraser, Tandra, Murphy, Andrew, Scanlan, David J., Bending, G. D., Jones, Alexandra M., Moore, Jonathan D., Goodall, Andrew, Tibbett, Mark, Hammond, John P. and Wellington, E. M. H. (2017) The โknownโ genetic potential for microbial communities to degrade organic phosphorus is reduced in low-pH soils. MicrobiologyOpen . e00474. doi:10.1002/mbo3.474 ISSN 2045-8827.
Tsapras, Panagiotis and Nezis, Ioannis P. (2017) Caspase involvement in autophagy. Cell Death & Differentiation, 24 (8). pp. 1369-1379. doi:10.1038/cdd.2017.43 ISSN 1350-9047.
Cavaliere, Matteo, Feng, Song, Soyer, Orkun S. and Jimรฉnez, Josรฉ I. (2017) Cooperation in microbial communities and their biotechnological applications. Environmental Microbiology, 19 (8). pp. 2949-2963. doi:10.1111/1462-2920.13767 ISSN 1462-2912.
Hunter, Paul J., Atkinson, Laura D., Vickers, Laura, Lignou, Stella, Oruna-Concha, Maria Jose, Pink, David, Hand, Paul, Barker, Guy C., Wagstaff, Carol and Monaghan, James M. (2017) Oxidative discolouration in whole-head and cut lettuce : biochemical and environmental influences on a complex phenotype and potential breeding strategies to improve shelf-life. Euphytica, 213 (8). 180. doi:10.1007/s10681-017-1964-7 ISSN 0014-2336.
Footitt, Steven, รlcer-Footitt, Hรผlya, Hambidge, Angela J. and Finch-Savage, William E. (2017) A laboratory simulation of Arabidopsis seed dormancy cycling provides new insight into its regulation by clock genes and the dormancy-related genes DOG1 , MFT , CIPK23 and PHYA. Plant, Cell & Environment, 40 (8). pp. 1474-1486. doi:10.1111/pce.12940 ISSN 0140-7791.
Minas, Giorgos and Rand, D. A. (David A.) (2017) Long-time analytic approximation of large stochastic oscillators : simulation, analysis and inference. PLoS Computational Biology, 13 (7). e1005676. doi:10.1371/journal.pcbi.1005676 ISSN 1553-7358.
Good, Daryl B., Pham, Charlie, Jagas, Jacob, Lewandowski, Jรณzef R. and Ladizhansky, Vladimir (2017) Solid-state NMR provides evidence for small-amplitude slow domain motions in a multi-spanning transmembrane ฮฑ-helical protein. Journal of the American Chemical Society, 139 (27). pp. 9246-9258. doi:10.1021/jacs.7b03974 ISSN 0002-7863.
Tock, Andrew J. , Fourie, Deidrรฉ, Walley, Peter G., Holub, E. B., Soler, Alvaro, Cichy, Karen A., Pastor-Corrales, Marcial A., Song, Qijian, Porch, Timothy G., Hart, John P., Vasconcellos, Renato C. C., Vicente, Joana G., Barker, Guy C. and Miklas, Phillip N. (2017) Genome-wide linkage and association mapping of halo blight resistance in common bean to Race 6 of the globally important bacterial pathogen. Frontiers in Plant Science, 8 . doi:10.3389/fpls.2017.01170 ISSN 1664-462X.
Li, Xiao, Wang, Juan, Shi, Mingxin, Wang, Weishan, Corre, Christophe and Yang, Keqian (2017) Evidence for the formation of ScbR/ScbR2 heterodimers and identification of one of the regulatory targets in Streptomyces coelicolor. Applied Microbiology and Biotechnology, 101 (13). pp. 5333-5340. ISSN 0175-7598.
Taylor, Jemma L., Massiah, Andrea J., Kennedy, Sue, Hong, Yiguo and Jackson, Stephen D. (2017) FLC expression is down-regulated by cold treatment in Diplotaxis tenuifolia (wild rocket), but flowering time is unaffected. Journal of Plant Physiology, 214 . pp. 7-15. doi:10.1016/j.jplph.2017.03.015 ISSN 0176-1617.
Ho, Y. T. Candace, Leng, Daniel J., Ghiringhelli, Francesca, Wilkening, Ina, Bushell, Dexter P., Kรถstner, Otto, Riva, Elena, Havemann, Judith, Passarella, Daniele and Tosin, Manuela (2017) Novel chemical probes for the investigation of nonribosomal peptide assembly. Chemical Communications, 53 (52). pp. 7088-7091. doi:10.1039/c7cc02427d ISSN 1359-7345.
Christie-Oleza, Joseph Alexander, Sousoni, Despoina, Lloyd, Matthew, Armengaud, Jean and Scanlan, David J. (2017) Nutrient recycling facilitates long-term stability of marine microbial phototrophโheterotroph interactions. Nature microbiology, 2 . 17100. doi:10.1038/nmicrobiol.2017.100 ISSN 2058-5276.
Song, Lijiang, Jenner, Matthew, Masschelein, Joleen, Jones, Cerith, Bull, Matthew J., Harris, Simon R., Hartkoorn, Ruben C., Vocat, Anthony, Romero-Canelรณn, Isolda, Coupland, Paul, Webster, Gordon, Dunn, Matthew, Weiser, Rebecca, Paisey, Christopher, Cole, Stewart T., Parkhill, Julian, Mahenthiralingam, Eshwar and Challis, Gregory L. (2017) Discovery and biosynthesis of Gladiolin : a Burkholderia gladioli antibiotic with promising activity against Mycobacterium tuberculosis. Journal of the American Chemical Society, 139 (23). pp. 7974-7981. doi:10.1021/jacs.7b03382 ISSN 0002-7863.
Qin, Cheng, Li, Bin, Fan, Yaya, Zhang, Xian, Yu, Zhiming, Ryabov, Eugene, Zhao, Mei, Wang, Hui, Shi, Nongnong, Zhang, Pengcheng, Jackson, Stephen D. , Tรถr, Mahmut, Cheng, Qi, Liu, Yule, Gallusci, Philippe and Hong, Yiguo (2017) Roles of dicer-like proteins 2 and 4 in intra- and intercellular antiviral silencing. Plant Physiology, 174 (2). pp. 1067-1081. doi:10.1104/pp.17.00475 ISSN 0032-0889.
Bowyer, Jack E., Hsiao, Victoria, Wong, Wilson W. and Bates, Declan (2017) Mechanistic modelling of a recombinase-based two-input temporal logic gate. Engineering Biology, 1 (1). pp. 40-50. doi:10.1049/enb.2017.0006 ISSN 2398-6182.
Lidbury, Ian, Murphy, Andrew, Fraser, Tandra D., Bending, G. D., Jones, Alexandra M., Moore, Jonathan D., Goodall, Andrew, Tibbetts, Mark, Hammond, John P., Scanlan, David J. and Wellington, E. M. H. (2017) Identification of extracellular glycerophosphodiesterases in Pseudomonas and their role in soil organic phosphorus remineralisation. Scientific Reports, 7 (1). 2179. doi:10.1038/s41598-017-02327-6 ISSN 2045-2322.
Burgess, Alexandra J., Retkute, Renata, Herman, Tiara and Murchie, Erik H. (2017) Exploring relationships between canopy architecture, light distribution, and photosynthesis in contrasting rice genotypes using 3D canopy reconstruction. Frontiers in Plant Science, 8 . 734. doi:10.3389/fpls.2017.00734 ISSN 1664-462X.
Dacheux, Estelle, Malys, Naglis, Meng, Xiang, Ramachandran, Vinoy, Mendes, Pedro and McCarthy, John E. G. (2017) Translation initiation events on structured eukaryotic mRNAs generate gene expression noise. Nucleic Acids Research, 45 (11). pp. 6981-6992. doi:10.1093/nar/gkx430 ISSN 0305-1048.
Hunter, Chris J., Remenyi, Judit, Correa, Sonia A., Privitera, Lucia, Reyskens, Kathleen M. S. E., Martin, Kirsty J., Toth, Rachel, Frenguelli, Bruno G. and Arthur, J. Simon C. (2017) MSK1 regulates transcriptional induction of Arc/Arg3.1 in response to neurotrophins. FEBS Open Bio, 7 (6). pp. 821-834. doi:10.1002/2211-5463.12232 ISSN 2211-5463.
Lavilla, Cristina, Yilmaz, Gokhan, Uzunova, Veselina, Napier, Richard, Becer, C. Remzi and Heise, Andreas (2017) Block sequence-specific glycopolypeptides with selective lectin binding properties. Biomacromolecules . doi:10.1021/acs.biomac.7b00356 ISSN 1525-7797.
Lin, Ming, Mita, Masatoshi, Egertovรก, Michaela , Zampronio, Cleidiane, Jones, Alexandra M. and Elphick, Maurice R. (2017) Cellular localization of relaxin-like gonad-stimulating peptide expression in Asterias rubens : new insights into neurohormonal control of spawning in starfish. Journal of Comparative Neurology, 525 (7). pp. 1599-1617. doi:10.1002/cne.24141 ISSN 0021-9967.
Smith, Edward M., Gilbert, Andrew, Russell, Claire L., Purdy, Kevin J., Medley, Graham, Muzafar, Mohd, Grogono-Thomas, Rosemary and Green, Laura E. (2017) Within-flock population dynamics of Dichelobacter nodosus. Frontiers In Veterinary Science, 4 (58). ISSN 2297-1769.
Bennett, Emma, Brignell, Christopher, Carion, Pierre, Cook, Samantha, Eastmond, Peter, Teakle, Graham R., Hammond, John, Love, Clare, King, Graham, Roberts, Jeremy and Wagstaff, Carol (2017) Development of a statistical crop model to explain the relationship between seed yield and phenotypic diversity within the Brassica napus genepool. Agronomy, 7 (2). 31. doi:10.3390/agronomy7020031 ISSN 2073-4395.
Popat, Roman, Harrison, Freya, da Silva, Ana C., Easton, Scott A. S., McNally, Luke, Williams, Paul and Diggle, Stephen P. (2017) Environmental modification via a quorum sensing molecule influences the social landscape of siderophore production. Proceedings of the Royal Society B: Biological Sciences, 284 (1852). 20170200. doi:10.1098/rspb.2017.0200 ISSN 0962-8452.
Foo, Mathias, Kim, Jongrae, Sawlekar, Rucha and Bates, Declan (2017) Design of an embedded inverse-feedforward biomolecular tracking controller for enzymatic reaction processes. Computers & Chemical Engineering, 99 . pp. 145-157. doi:10.1016/j.compchemeng.2017.01.027 ISSN 0098-1354.
Phillips, Daniel J., Harrison, James, Richards, Sarah-Jane, Mitchell, Daniel E., Tichauer, Esther, Hubbard, Alasdair T. M., Guy, Collette S., Hands-Portman, Ian, Fullam, Elizabeth and Gibson, Matthew I. (2017) Evaluation of the antimicrobial activity of cationic polymers against mycobacteria : toward antitubercular macromolecules. Biomacromolecules, 18 (5). pp. 1592-1599. doi:10.1021/acs.biomac.7b00210 ISSN 1525-7797.
OโKane, Holly, Ferguson, Eamonn, Kaler, Jasmeet and Green, Laura E. (2017) Associations between sheep farmer attitudes, beliefs, emotions and personality, and their barriers to uptake of best practice : the example of footrot. Preventive Veterinary Medicine, 139 (Part B). pp. 123-133. doi:10.1016/j.prevetmed.2016.05.009 ISSN 0167-5877.
Ieong , Nga Sze, Biggs, Caroline I., Walker , Mark and Gibson, Matthew I. (2017) Comparison of RAFT derived poly(vinylpyrolidone) verses Poly(oligoethyleneglycol methacrylate) for the stabilization of glycosylated gold nanoparticles. Journal of Polymer Science Part A : Polymer Chemistry, 55 (7). pp. 1200-1280. doi:10.1002/pola.28481 ISSN 1099-0518.
Prince, David C., Rallapalli, Ghanasyam, Xu, Deyang, Schoonbeek, Henk-jan, Cevik, Volkan, Asai, Shuta, Kemen, Eric, Cruz-Mireles, Neftaly, Kemen, Ariane C., Belhaj, Khaoula, Schornack, Sebastian, Kamoun, Sophien, Holub, E. B., Halkier, Barbara A. and Jones, Jonathan D. G. (2017) Albugo-imposed changes to tryptophan-derived antimicrobial metabolite biosynthesis may contribute to suppression of non-host resistance to Phytophthora infestans in Arabidopsis thaliana. BMC Biology, 15 (20). 360. doi:10.1186/s12915-017-0360-z ISSN 1741-7007.
Smith, Sarah Marie, Yarwood, Andrew, Fleck, Roland A., Robinson, Colin and Smith, Corinne J. (2017) TatA complexes exhibit a marked change in organisation in response to expression of the TatBC complex. Biochemical Journal, 474 (9). pp. 1495-1508. doi:10.1042/BCJ20160952 ISSN 0264-6021.
Kendrick, Felicity, Evans, Neil D., Arnulf, Bertrand, Avet-Loiseau, Hervรฉ, Decaux, Olivier, Dejoie, Thomas, Fouquet, Guillemette, Guidez, Stรฉphanie, Harel, Stรฉphanie, Hebraud, Benjamin, Javaugue, Vincent, Richez, Valentine, Schraen, Susanna, Touzeau, Cyrille, Moreau, Philippe, Leleu, Xavier, Harding, Stephen and Chappell, Michael J. (2017) Analysis of a compartmental model of endogenous immunoglobulin G metabolism with application to multiple myeloma. Frontiers in Physiology, 8 . 149. doi:10.3389/fphys.2017.00149 ISSN 1664-042X.
Newton, Adam J. H., Wall, Mark J. and Richardson, Magnus J. E. (2017) Modelling microelectrode biosensors : free-flow calibration can substantially underestimate tissue concentrations. Journal of Neurophysiology, 117 (3). pp. 937-949. doi:10.1152/jn.00788.2016 ISSN 0022-3077.
Vajs, Jure, Proud, Conor, Brozovic, Anamaria, Gazvoda, Martin, Lloyd, Adrian J., Roper, David I., Osmak, Maja, Koลกmrlj, Janez and Dowson, Christopher G. (2017) Diaryltriazenes as antibacterial agents against methicillin resistant Staphylococcus aureus (MRSA) and Mycobacterium smegmatis. European Journal of Medicinal Chemistry, 127 . pp. 223-234. doi:10.1016/j.ejmech.2016.12.060 ISSN 0223-5234.
Daumas, Stephanie, Hunter, Christopher J., Mistry, Rajen B., More, Lorenzo, Privitera, Lucia, Cooper, Daniel D., Reyskens, Kathleen M., Flynn, Harry T., Morris, Richard G. M., Simon, J., Arthur, C. and Frenguelli, Bruno G. (2017) The kinase function of MSK1 regulates BDNF signaling to CREB and basal synaptic transmission, but is not required for hippocampal long-term potentiation or spatial memory. eNeuro, 4 (1). 0212-0216. doi:10.1523/ENEURO.0212-16.2017 ISSN 2373-2822.
Cole, David K., Berg, Hugo van den, Lloyd, Angharad, Crowther, Michael D., Beck, Konrad, Ekeruche-Makinde, Julia, Miles, John J., Bulek, Anna M., Dolton, Garry, Schauenburg, Andrea J., Wall, Aaron, Fuller, Anna, Clement, Mathew, Laugel, Bruno, Rizkallah, Pierre J., Wooldridge, Linda and Sewell, Andrew K. (2017) Structural mechanism underpinning cross-reactivity of a CD8+ T-cell clone that recognises a peptide derived from human telomerase reverse transcriptase. Journal of Biological Chemistry, 292 . pp. 802-813. doi:10.1074/jbc.M116.741603 ISSN 0021-9258.
Inahashi, Yuki, Zhou, Shanshan, Bibb, Maureen J., Song, Lijiang, Al-Bassam, Mahmoud M., Bibb, Mervyn J. and Challis, Gregory L. (2017) Watasemycin biosynthesis in Streptomyces venezuelae : thiazoline C-methylation by a type B radical-SAM methylase homologue. Chemical Science, 8 (4). pp. 2823-2831. doi:10.1039/c6sc03533g ISSN 2041-6520.
(2017) Genome sequence and genetic diversity of European ash trees. Nature, 541 . pp. 212-216. doi:10.1038/nature20786 ISSN 0028-0836.
Koito, Yusuke, Rees, Gregory J., Hanna, John V., Li, Molly M. J., Peng, Yung-Kang, Puchtler, Tim, Taylor, Robert, Wang, Tong, Kobayashi, Hisayoshi, Teixeira, Ivo F., Khan, M. Abdullah, Kreissl, Hannah T. and Tsang, S. C. Edman (2017) Structure-activity correlations for Brรธnsted acid, Lewis Acid, and photocatalyzed reactions of exfoliated crystalline niobium oxides. ChemCatChem, 9 (1). pp. 144-154. doi:10.1002/cctc.201601131 ISSN 1867-3880.
Rock, Kat S., Torr, Steven J., Lumbala, Crispin and Keeling, Matthew James (2017) Predicting the impact of intervention strategies for sleeping sickness in two high-endemicity health zones of the Democratic Republic of Congo. PLoS Neglected Tropical Diseases, 11 (1). e0005162. doi:10.1371/journal.pntd.0005162 ISSN 1935-2727.
de Laune, Benjamin P., Rees, Gregory J., Whitaker, Mariana J., Hah, Hien-Yoong, Johnson, Charles E., Johnson, Jacqueline A., Brown, Dennis E., Tucker, Matthew G., Hansen, Thomas C., Berry, Frank J., Hanna, John V. and Greaves, Colin (2017) Oxygen insertion reactions within the one-dimensional channels of phases related to FeSb2O4. Inorganic Chemistry, 56 (1). pp. 594-607. doi:10.1021/acs.inorgchem.6b02466 ISSN 0020-1669.
Rahmanpour, Rahman, King, Lloyd D. W and Bugg, Tim (2017) Identification of an extracellular bacterial flavoenzyme that can prevent re-polymerisation of lignin fragments. Biochemical and Biophysical Research Communications, 482 (1). pp. 57-61. doi:10.1016/j.bbrc.2016.10.144 ISSN 0006-291X.
Juriฤ, Ivan, Gonzรกlez-Pรฉrez, Vinicio, Hibberd, Julian, Edwards, Gerald and Burroughs, Nigel John (2017) Size matters for single-cell C4 photosynthesis in Bienertia. Journal of Experimental Botany, 68 (2). pp. 255-267. doi:10.1093/jxb/erw374 ISSN 0022-0957.
Havemann, Judith, Yurkovich, Marie E., Jenkins, Robert, Harringer, Sophia, Tao, Weixin, Wen, Shishi, Sun, Yuhui, Leadlay, P. F. and Tosin, Manuela (2017) Chemical probing of thiotetronate bio-assembly. Chemical Communications, 53 (11). pp. 1912-1915. doi:10.1039/C6CC09933E ISSN 1359-7345.
Awan, Sajjad Zahoor, Chandler, Jake Owen, Harrison, Peter J., Sergeant, Martin J., Bugg, Tim and Thompson, Andrew David (2017) Promotion of germination using hydroxamic acid inhibitors of 9-cis-epoxycarotenoid dioxygenase. Frontiers in Plant Science, 8 . 357. doi:10.3389/fpls.2017.00357 ISSN 1664-462X.
Awodi, U. R., Ronan, Jade L., Masschelein, Joleen, Emmanuel de los Santos, L. C. and Challis, Gregory L. (2017) Thioester reduction and aldehyde transamination are universal steps in actinobacterial polyketide alkaloid biosynthesis. Chemical Science, 8 (1). pp. 411-415. doi:10.1039/C6SC02803A ISSN 2041-6520.
Yurkovich, Marie E., Jenkins, Robert, Sun, Yuhui, Tosin, Manuela and Leadlay, P. F. (2017) The polyketide backbone of thiolactomycin is assembled by an unusual iterative polyketide synthase. Chemical Communications, 53 (13). pp. 2182-2185. doi:10.1039/C6CC09934C ISSN 1359-7345.
Simmons, Thomas J., Mortimer, Jenny C., Bernardinelli, Oigres D., Pรถppler, Ann Christin, Brown, Steven P., de Azevedo, Eduardo R, Dupree, Ray and Dupree, Paul (2016) Folding of xylan onto cellulose fibrils in plant cell walls revealed by solid-state NMR. Nature Communications, 7 . 13902 . doi:10.1038/ncomms13902 ISSN 2041-1723.
Meng, Xiang, Firczuk, Helena, Pietroni, Paola, Westbrook, Richard, Dacheux, Estelle, Mendes, Pedro and McCarthy, John E. G. (2016) Minimum-noise production of translation factor eIF4G maps to a mechanistically determined optimal rate control window for protein synthesis. Nucleic Acids Research, 45 (2). pp. 1015-1025. doi:10.1093/nar/gkw1194 ISSN 0305-1048.
Alguel, Y., Cameron, Alexander, Diallinas, G. and Byrne, B. (2016) Transporter oligomerization : form and function. Biochemical Society Transactions, 44 (6). pp. 1737-1744. doi:10.1042/BST20160217 ISSN 0300-5127.
Werkman, Marleen, Tildesley, Michael J., Brooks-Pollock, Ellen and Keeling, Matthew James (2016) Preserving privacy whilst maintaining robust epidemiological predictions. Epidemics, 17 . pp. 35-41. doi:10.1016/j.epidem.2016.10.004 ISSN 1755-4365.
Morris, Karl, Barker, Guy C., Walley, Peter Glen, Lynn, James R. and Finch-Savage, William E. (2016) Trait to gene analysis reveals that allelic variation in three genes determines seed vigour. New Phytologist, 212 (4). pp. 964-976. doi:10.1111/nph.14102 ISSN 0028-646X.
Shaw, Sophie, Le Cocq, Kate, Paszkiewicz, Konrad, Moore, Karen, Winsbury, Rebecca, de Torres Zabala, Marta, Studholme, David, Salmon, Deborah, Thornton, Christopher R. and Grant, Murray R. (2016) Transcriptional reprogramming underpins enhanced plant growth promotion by the biocontrol fungus Trichoderma hamatum GD12 during antagonistic interactions with Sclerotinia sclerotiorumin soil. Molecular Plant Pathology, 17 (9). pp. 1425-1441. doi:10.1111/mpp.12429 ISSN 1464-6722.
Groรkopf, Tobias, Zenobi, Simone, Alston, Mark, Folkes, Leighton, Swarbreck, David and Soyer, Orkun S. (2016) A stable genetic polymorphism underpinning microbial syntrophy. The ISME Journal, 10 . pp. 2844-2853. doi:10.1038/ismej.2016.80 ISSN 1751-7362.
Bird, Alex D., Wall, Mark J. and Richardson, Magnus J. E. (2016) Bayesian inference of synaptic quantal parameters from correlated vesicle release. Frontiers in Computational Neuroscience, 10 . 116. doi:10.3389/fncom.2016.00116 ISSN 1662-5188.
Archer, Nathan, Walsh, Mark, Shahrezaie, Vahid and Hebenstreit, Daniel (2016) Modeling enzyme processivity reveals that RNA-Seq libraries are biased in characteristic and correctable ways. Cell Systems, 3 (5). pp. 467-479. doi:10.1016/j.cels.2016.10.012 ISSN 2405-4712.
Ray, Lauren, Valentic, Timothy R., Miyazawa, Takeshi, Withall, David M., Song, Lijiang, Milligan, Jacob C., Osada, Hiroyuki, Takahashi, Shunji, Tsai, Shiou-Chuan and Challis, Gregory L. (2016) A crotonyl-CoA reductase-carboxylase independent pathway for assembly of unusual alkylmalonyl-CoA polyketide synthase extender units. Nature Communications, 7 . 13609. doi:10.1038/ncomms13609 ISSN 2041-1723.
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Kadi, Nadia, Song, Lijiang and Challis, Gregory L. (2008) Bisucaberin biosynthesis : an adenylating domain of the BibC multi-enzyme catalyzes cyclodimerization of N-hydroxy-N-succinylcadaverine. Chemical Communications (No.41). pp. 5119-5121. doi:10.1039/b813029a ISSN 1359-7345.
Spooner, Robert A., Harte, Philip J. , Cook, Jonathan P., Pietroni, Paola, Rogon, Christian, Hรถhfeld, Jรถrg, Roberts, L. M. (Lynne M.) and Lord, Mike (2008) Cytosolic chaperones influence the fate of a toxin dislocated from the endoplasmic reticulum. Proceedings of the National Academy of Sciences of the United States of America, Vol.105 (No.45). pp. 17408-17413. doi:10.1073/pnas.0809013105 ISSN 0027-8424.
Pouteau, Sylvie, Carrรฉ, Isabelle A., Gaudin, Valerie, Ferret, Valerie, Lefebvre, Delphine and Wilson, Melanie (2008) Diversification of photoperiodic response patterns in a collection of early-flowering mutants of arabidopsis. Plant Physiology, Volume 148 (Number 3). pp. 1465-1473. doi:10.1104/pp.108.127639 ISSN 0032-0889.
McMahon, Stephen A., Oke, Muse, Liu, Huanting, Johnson, K. A. (Kenneth A.), Carter, Lester, Kadi, Nadia, White, Malcolm F., Challis, Gregory L. and Naismith, James H. (2008) Purification, crystallization and data collection of Pectobacterium chrysanthemi AcsD, a type A siderophore synthetase. Acta Crystallographica. Section F: Structural Biology and Crystallization Communications, Vol.64 (Pt.11). pp. 1052-1055. doi:10.1107/S1744309108032132 ISSN 1744-3091.
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Wong, A. (Alan), Laurencin, Danielle, Wu, Gang, Dupree, Ray and Smith, Mark E. (2008) An ab initio quantum chemical investigation of Ca-43 NMR interaction parameters for the Ca2+ sites in organic complexes and in metalloproteins. Journal of Physical Chemistry A, Volume 112 (Number 40). pp. 9807-9813. doi:10.1021/jp801015y ISSN 1089-5639.
Xue, Mingzhan, Qian, Qingwen, Antonysunil, Adaikalakoteswari, Rabbani, Naila, Babaei-Jadidi, Roya and Thornalley, Paul J. (2008) Activation of NF-E2-related factor-2 reverses biochemical dysfunction of endothelial cells induced by hyperglycemia linked to vascular disease. Diabetes, Volume 57 (Number 10). pp. 2809-2817. doi:10.2337/db06-1003 ISSN 0012-1797.
Qian, Min, Zhang, Xuejuan, Wilson, Roland and Feng, Jianfeng (2008) Efficiency of Brownian motors in terms of entropy production rate. Europhysics Letters (EPL), Vol.84 (No.1). doi:10.1209/0295-5075/84/10014 ISSN 0295-5075.
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Aldridge, Cassie, Spence, Edward M., Kirkilionis, Markus, Frigerio, Lorenzo and Robinson, Colin (2008) Tat-dependent targeting of Rieske iron-sulphur proteins to both the plasma and thylakoid membranes in the cyanobacterium Synechocystis PCC6803. Molecular Microbiology, Volume 70 (Number 1). pp. 140-150. doi:10.1111/j.1365-2958.2008.06401.x ISSN 0950-382X.
Rea, Dean, Hovington, Rebecca, Rakus, John F., Gerlt, John A., Fรผlรถp, Vilmos, Bugg, Tim and Roper, David I. (2008) Crystal structure and functional assignment of YfaU, a metal ion dependent class II aldolase from Escherichia coli K12. Biochemistry, Vol.47 (No.38). pp. 9955-9965. doi:10.1021/bi800943g ISSN 0006-2960.
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Oves-Costales, Daniel, Kadi, Nadia, Fogg, Mark J., Song, Lijiang, Wilson, Keith S. and Challis, Gregory L. (2008) Petrobactin biosynthesis: AsbB catalyzes condensation of spermidine with N-8-citryl-spermidine and its N-1-(3,4-dihydroxybenzoyl) derivative. Chemical Communications (No.34). pp. 4034-4036. doi:10.1039/b809353a ISSN 1359-7345.
Dat Nguyen, Van, Wallis, A. Katrine, Howard, Mark J., Haapalainen, Antti M., Salo, Kirsi E. H., Saaranen, Mirva J. , Sidhu, Ateesh, Wierenga, Rik K., Freedman, R. B., Ruddock, Lloyd W. and Williamson, Richard A. (2008) Alternative conformations of the x region of human protein disulphide-isomerase modulate exposure of the substrate binding bโ domain. Journal of Molecular Biology, Vol.383 (No.5). pp. 1144-1155. doi:10.1016/j.jmb.2008.08.085 ISSN 0022-2836.
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Nikitin, Eugeny S., Vavoulis, Dimitris V., Kemenes, Ildiko, Marra, Vincenzo, Pirger, Zsolt, Michel, Maximilian, Feng, Jianfeng, O'Shea, Michael, Benjamin, Paul R. and Kemenes, Gyoergy (2008) Persistent sodium current is a nonsynaptic substrate for long-term associative memory. Current Biology, Vol.18 (No.16). pp. 1221-1226. doi:10.1016/j.cub.2008.07.030 ISSN 0960-9822.
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Kadi, Nadia, Arbache, Simon, Song, Lijiang, Oves-Costales, Daniel and Challis, Gregory L. (2008) Identification of a gene cluster that directs putrebactin biosynthesis in Shewanella species : PubC catalyzes cyclodimerization of N-hydroxy-N-succinyiputrescine. Journal of the American Chemical Society, Vol.130 (No.32). pp. 10458-10459. doi:10.1021/ja8027263 ISSN 0002-7863.
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Hilton, Sally and Winstanley, Doreen (2008) The origins of replication of granuloviruses. Archives of Virology, Volume 153 (Number 8). pp. 1527-1535. doi:10.1007/s00705-008-0148-0 ISSN 0304-8608.
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Allen, Rebecca L., Meitz, Julia C., Baumber, Rachel E., Hall, Sharon A., Lee, Sarah C., Rose, Laura E. and Beynon, Jim (2008) Natural variation reveals key amino acids in a downy mildew effector that alters recognition specificity by an Arabidopsis resistance gene. Molecular Plant Pathology, Volume 9 (Number 4). pp. 511-523. doi:10.1111/j.1364-3703.2008.00481.x ISSN 1464-6722.
Lin, Zhefeng, Hong, Yiguo , Yin, Mingan, Li, Chunyang, Zhang, Kefeng and Grierson, Donald (2008) A tomato HD-Zip homeobox protein, LeHB-1, plays an important role in floral organogenesis and ripening. Plant Journal, Volume 55 (Number 2). pp. 301-310. doi:10.1111/j.1365-313X.2008.03505.x ISSN 0960-7412.
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Cooper, A. J., Latunde-Dada, A. O., Woods-Tor, A., Lynn, James R. , Lucas, J. A., Crute, I. R. and Holub, E. B. (2008) Basic compatibility of Albugo candida in Arabidopsis thaliana and Brassica juncea causes broad-spectrum suppression of innate immunity. Molecular Plant - Microbe Interactions, Vol.21 (No.6). pp. 745-756. doi:10.1094/MPMI-21-6-0745 ISSN 0894-0282.
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Sanghera, Narinder, Wall, Mark J., Venien-Bryan, Catherine and Pinheiro, Teresa J. T. (2008) Globular and pre-fibrillar prion aggregates are toxic to neuronal cells and perturb their electrophysiology. Biochimica et Biophysica Acta - Proteins and Proteomics, Vol.1784 (No.6). pp. 873-881. doi:10.1016/j.bbapap.2008.02.017 ISSN 1570-9639.
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Borhan, M. Hossein, Gunn, Nick, Cooper, Abigail, Gulden, Sigrun, Tรถr, Mahmut, Rimmer, Samuel Roger and Holub, E. B. (2008) WRR4 encodes a TIR-NB-LRR protein that confers broad-spectrum white rust resistance in Arabidopsis thaliana to four physiological races of Albugo candida. Molecular Plant-Microbe Interactions, Vol.21 (No.6). pp. 757-768. doi:10.1094/MPMI-21-6-0757 ISSN 0894-0282.
Gattolin, Stefano, Newbury, H. J., Bale, J. S. (Jeffrey S.), Tseng, Hua-Ming, Barrett, D. A. (David A.) and Pritchard, Jeremy (2008) A diurnal component to the variation in sieve tube amino acid content in wheat. Plant Physiology, Vol.147 (No.2). pp. 912-921. doi:10.1104/pp.108.116079 ISSN 0032-0889.
Wang, Guodong, Ellendorff, Ursula, Kemp, Ben, Mansfield, John W., Forsyth, Alec, Mitchell, K., Bastas, Kubilay, Liu, Chun-Ming, Woods-Toer, Alison, Zipfel, Cyril, Wit, P. J. G. M., Jones, Jonathan D. G., Toer, Mahmut and Thomma, Bart P. H. J. (2008) A genome-wide functional investigation into the roles of receptor-like proteins in Arabidopsis. Plant Physiology, Vol.147 (No.2). pp. 503-517. doi:10.1104/pp.108.119487 ISSN 0032-0889.
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McSharry, Brian P., Burgert, Hans-Gerhard , Owen, Douglas P., Stanton, Richard J., Prod'homme, Virginie, Sester, Martina, Koebernick, Katja, Groh, Veronika, Spies, Thomas, Cox, S. (Steven), Little, Ann-Margaret, Wang, Eddie C. Y., Tomasec, Peter and Wilkinson, Gavin W. G. (2008) Adenovirus E3/19K promotes evasion of NK cell recognition by intracellular sequestration of the NKG2D ligands, major histocompatibility complex class I chain-related proteins A and B. Journal of Virology, Vol.82 (No.9). pp. 4585-4594. doi:10.1128/JVI.02251-07 ISSN 0022-538X.
Talhinhas, Pedro, Muthumeenakshi, S., Martins, J. M. Neves (Joรฃo M. Neves), Oliveira, Helena and Sreenivasaprasad, S. (2008) Agrobacterium-mediated transformation and insertional mutagenesis in Colletotrichum acutatum for investigating varied pathogenicity lifestyles. Molecular Biotechnology, Vol.39 (No.1). pp. 57-67. doi:10.1007/s12033-007-9028-1 ISSN 1073-6085.
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Li, C. (Chuan), Liu, Yong-Ping, Liu, Kuo-Kang and Lai, A. C. K. (2008) Correlations between the experimental and numerical investigations on the mechanical properties of erythrocyte by laser stretching. IEEE Transactions on NanoBioscience, Vol.7 (No.1). pp. 80-90. doi:10.1109/TNB.2008.2000152 ISSN 1536-1241.
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Haworth, Claire M. A., Butcher, Lee M., Docherty, Sophia J., Wardle, Jane and Plomin, Robert (2008) No evidence for association between BMI and 10 candidate genes at ages 4, 7 and 10 in a large UK sample of twins. BMC Medical Genetics, Volume 9 . Article number 12. doi:10.1186/1471-2350-9-12 ISSN 1471-2350.
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Koentges, Georgy (2008) Evolution of anatomy and gene control. Nature, Volume 451 (Number 7179). pp. 658-663. doi:10.1038/451658a ISSN 0028-0836.
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Kunar, Melina A., Humphreys, Glyn W., Smith, Kelly J. and Watson, Derrick G. (2003) When a reappearance is old news : visual marking survives occlusion. Journal of Experimental Psychology: Human Perception and Performance, Vol.29 (No.1). pp. 185-198. doi:10.1037//0096-1523.29.1.185 ISSN 0096-1523.
Miles, Andrew J., Wien, Frank, Lees, Jonathan G., Rodger, Alison and Wallace, Bonnie Ann (2003) Calibration and standardisation of synchrotron radiation circular dichroism and conventional circular dichroism spectrophotometers. Spectroscopy, Vol.17 (No.4). pp. 653-661. ISSN 1875-922X .
Kunar, Melina A., Humphreys, Glyn W. and Smith, Kelly J. (2003) History matters: the preview benefit in search is not onset capture. Psychological Science, Vol.14 (No.2). pp. 181-185. doi:10.1111/1467-9280.t01-1-01439 ISSN 0956-7976.
Kunar, Melina A., Humphreys, Glyn W., Smith, Kelly J. and Hulleman, Johan (2003) What is โmarkedโ in visual marking? Evidence for effects of configuration in preview search. Perception & Psychophysics, Vol.65 (No.6). pp. 982-996. doi:10.3758/BF03194828 ISSN 0031-5117.
Lamberts, Koen, Brockdorff, Noellie and Heit, Evan (2002) Perceptual processes in matching and recognition of complex pictures. Journal of Experimental Psychology: Human Perception and Performance, Vol.28 (No.5). pp. 1176-1191. doi:10.1037//0096-1523.28.5.1176 ISSN 0096-1523.
McCormack, Teresa, Brown, G. D. A. (Gordon D. A.), Maylor, Elizabeth A., Richardson, Lucy B. N. and Darby , Richard J. (2002) Effects of aging on absolute identification of duration. Psychology and Aging, Vol.17 (No.3). pp. 363-378. doi:10.1037//0882-7974.17.3.363 ISSN 0882-7974.
Stewart, Neil and Chater, Nick (2002) The effect of category variability in perceptual categorization. Journal of Experimental Psychology: Learning, Memory, and Cognition, Vol.28 (No.5). pp. 893-907. doi:10.1037/0278-7393.28.5.893 ISSN 0278-7393.
Liang, Xiangyang, Parkinson, J. A. (John A.), Weishรคupl, Michael, Gould, Robert O., Paisey, Stephen J., Park, Hye-seo, Hunter, Tina M., Blindauer, Claudia A., Parsons, S. (Simon) and Sadler, P. J. (2002) Structure and dynamics of metallomacrocycles : recognition of zinc xylyl-bicyclam by an HIV coreceptor. Journal of the American Chemical Society, Vol.124 (No.31). pp. 9105-9112. doi:10.1021/ja0260723 ISSN 0002-7863.
Stewart, Neil, Brown, G. D. A. and Chater, Nick (2002) Sequence effects in categorization of simple perceptual stimuli. Journal of Experimental Psychology: Learning, Memory, and Cognition, 28 (1). pp. 3-11. doi:10.1037//0278-7393.28.1.3 ISSN 0278-7393.
Clarkson, John P. and Whipps, J. M. (2002) Control of sclerotial pathogens in horticulture. Pesticide Outlook, 13 (3). pp. 97-101. doi:10.1039/b205179f ISSN 0956-1250.
Moore, Alec B. M. (2001) Metazoan parasites of the lesser-spotted dogfish Scyliorhinus canicula and their potential as stock discrimination tools. Journal of the Marine Biological Association of the United Kingdom, Vol.81 (No.6). pp. 1009-1013. doi:10.1017/S0025315401004982 ISSN 0025-3154.
White, L. J., Schukken, Y. H., Lam, T. J. G. M., Medley, Graham and Chappell, M. J. (Michael J.) (2001) A multispecies model for the transmission and control of mastitis in dairy cows. Epidemiology and Infection, Vol.127 (No.3). pp. 567-576. doi:10.1017/S0950268801006100 ISSN 0950-2688.
Woolhead, Cheryl A., Thompson, Simon J., Moore, Misty, Tissier, Christophe, Mant, Alexandra, Rodger, Alison, Henry, Ralph and Robinson, Colin (2001) Distinct albino3-dependent and -independent pathways for thylakoid membrane protein insertion. Journal of Biological Chemistry, Vol.276 (No.44). pp. 40841-40846. doi:10.1074/jbc.M106523200 ISSN 00219258.
Muthumeenakshi, S., Goldstein, Alan L., Stewart, Alison and Whipps, J. M. (2001) Molecular studies on intraspecific diversity and phylogenetic position of Coniothyrium minitans. Mycological Research, Vol.10 (No.9). pp. 1065-1074. doi:10.1017/S0953756201004440 ISSN 0953-7562.
Watkinson, Sarah C., Burton, Kerry S. and Wood, David A. (2001) Characteristics of intracellular peptidase and proteinase activities from the mycelium of a cord-forming wood decay fungus Serpula lacrymans. Mycological Research, Vol.10 (No.6). pp. 698-704. doi:10.1017/S0953756201003938 ISSN 0953-7562.
Bryson, K., Luck, Michael (Michael M.), Joy, Mike and Jones, D. T. (2001) Agent interaction for bioinformatics data management. Applied Artificial Intelligence, Volume 15 (Number 10). pp. 917-947. doi:10.1080/088395101753242688 ISSN 0883-9514.
Wills, A.J., Reimers, Stian, Stewart, Neil, Suret, Mark and McLaren, I.P.L (2000) Tests of the ratio rule in categorization. Quarterly Journal of Experimental Psychology. Section A: Human Experimental Psychology, Vol.53 (No.4). pp. 983-1011. doi:10.1080/02724980050156263 ISSN 0272-4987.
Sanghera, Narinder and Pinheiro, Teresa J. T. (2000) Unfolding and refolding of cytochrome c driven by the interaction with lipid micelles. Protein Science, Vol.9 (No.6). pp. 1194-1202. doi:10.1110/ps.9.6.1194 ISSN 1194-1202.
Gays, Frances, Unnikrishnan, Meera, Shrestha, Sunil, Fraser, Karen P., Brown, Adam R., Tristram, Colin M. G., Chrzanowska-Lightowlers, Z. M. and Brooks, Colin G. (2000) The mouse tumor cell lines EL4 and RMA display mosaic expression of NK-related and certain other surface molecules and appear to have a common origin. Journal of Immunology, Volume 164 (Number 10). pp. 5094-5102. ISSN 0022-1767.
Brockdorff, Noellie and Lamberts, Koen (2000) A feature-sampling account of the time course of old-new recognition judgments. Journal of Experimental Psychology: Learning, Memory, and Cognition, Volume 26 (Number 1). pp. 77-102. doi:10.1037/0278-7393.26.1.77 ISSN 0278-7393.
Phelan, Pauline, Nakagawa, Madoka, Wilkin, Marian B., Moffat, Kevin G., O'Kane, Cahir J. and Bacon, J. P. (Jonathan P.) (1996) Mutations in shaking-B prevent electrical synapse formation in the Drosophila giant fiber system. Journal of Neuroscience, Vol.16 (No.3). pp. 1101-1113. ISSN 0270-6474.
Book Item
Palara, Anthimi, Sagona, Antonia P. and Nezis, Ioannis P. (2016) Preparation of Drosophila follicles for transmission electron microscopy. In: Oogenesis : Methods and Protocols. Methods in Molecular Biology, 1457 . Springer, pp. 105-110. ISBN 9781493937936
Jacomin, Anne-Claire and Nezis, Ioannis P. (2016) Using fluorescent reporters to monitor autophagy in the female germline cells in Drosophila melanogaster. In: Oogenesis : Methods and Protocols. Springer, pp. 69-78. ISBN 9781493937936
Tsapras, Panagiotis , Sagona, Antonia P. and Nezis, Ioannis P. (2016) Immuno-gold labeling of Drosophila follicles for transmission electron microscopy. In: Oogenesis : Methods and Protocols. Methods in Molecular Biology, 1457 . Springer, pp. 97-103. ISBN 9781493937936
Rock, Kat S., Stone, Chris M., Hastings, Ian M., Keeling, Matthew James, Torr, Stephen J. and Chitnis, Nakul (2015) Mathematical models of human African trypanosomiasis epidemiology. In: Mathematical Models for Neglected Tropical Diseases: Essential Tools for Control and Elimination, Part A. Academic Press, pp. 53-133.
Stegle, Oliver, Denby, Katherine J., Cooke, Emma J., Wild, David L., Ghahramani, Zoubin and Borgwardt, Karsten M. (2010) A robust Bayesian two-sample test for detecting intervals of differential gene expression in microarray time series. In: Research in Computational Molecular Biology : Proceedings of the 13th Annual International Conference, RECOMB 2009, Tucson, AZ, USA, May 18-21, 2009. Lecture Notes in Computer Science, Volume 5541 . Berlin Heidelberg: Springer, pp. 201-216. ISBN 9783642020087
Bryson, K., Luck, Michael (Michael M.), Joy, Mike and Jones, David T. (2000) Applying agents to bioinformatics in GeneWeaver. In: Klusch, Matthias, 1965- and Kerschberg, Larry, (eds.) Cooperative information agents IV : The future of information agents in cyberspace. Lecture Notes in Computer Science (Volume 1860). Berlin ; London: Springer, pp. 60-71. ISBN 9783540677031
Conference Item
Foo, Mathias, Sawlekar, Rucha, Kim, J., Bates, Declan, Stan, Guy-Bart and Kulkarni, Vishwesh V. (2017) Biomolecular implementation of nonlinear system theoretic operators. In: European Control Conference 2016, Aalborg, Denmark, 29 Jun-1 Jul 2016. Published in: 2016 European Control Conference (ECC) ISBN 9781509025923. doi:10.1109/ECC.2016.7810556
Kulkarni, Vishwesh V. and Raman, Karthik (2016) Fast identification of synthetic lethals using quadratic programming. In: Synthetic Biology UK 2016, Edinburgh, 14-16 Nov 2016. Published in: Synthetic Biology UK 2016
Foo, Mathias, Sawlekar, Rucha, Kulkarni, Vishwesh V. and Bates, Declan (2016) Biologically inspired design of feedback control systems implemented using DNA strand displacement reactions. In: 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), Orlando, Florida, 16-20 Aug 2016. Published in: 2016 IEEE 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) ISSN 1558-4615.
Kulkarni, Vishwesh V., El Menjra, Lina, Carbonell, Pablo and Faulon, Jean-Loup (2016) Integrated predictive genome-scale models to improve the metabolic re-engineering efficiency. In: 8th International Workshop on Bio-Design Automation, Newcastle-upon-Tyne, UK, 16-18 Aug 2016
Sawlekar, Rucha, Montefusco, Francesco, Kulkarni, Vishwesh V. and Bates, Declan (2015) Biomolecular implementation of a quasi sliding mode feedback controller based on DNA strand displacement reactions. In: 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), Milan, Italy, August 25-29, 2015. Published in: Proceedings of the 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society pp. 949-952. ISSN DOI: 10.1109/EMBC.2015.7318520.
Gullam, J. E. , Blanks, Andrew M., Thornton, Steven and Shmygol, Anatoly (2009) Phase-plot analysis of the oxytocin effect on human myometrial contractility. In: 1st Meeting on Reproductive Bioengineering, Pitztal, Austria, April, 2008. Published in: European Journal of Obstetrics, Gynecology and Reproductive Biology, Vol.144 (Sp. Iss. SI Suppl. 1). S20-S24. doi:10.1016/j.ejogrb.2009.02.020 ISSN 0301-2115.
Rabbani, Naila and Thornalley, Paul J. (2008) Dicarbonyls linked to damage in the powerhouse : glycation of mitochondrial proteins and oxidative stress. In: 3rd Intracellular Proteolysis Meeting, Canary Isl, Spain, Mar 05-07, 2008. Published in: Biochemical Society Transactions, Vol.36 (Pt.5). pp. 1045-1050. doi:10.1042/BST0361045 ISSN 0300-5127.
Tรถr, Mahmut (2008) Tapping into molecular conversation between oomycete plant pathogens and their hosts. In: 2nd International Downy Mildews Symposium, Olomouc, Czech Republic, Jul, 2007. Published in: European Journal of Plant Pathology, Vol.122 (No.1). pp. 57-69. doi:10.1007/s10658-008-9288-z ISSN 0929-1873.
Blindauer, Claudia A. (2008) Metallothioneins with unusual residues : histidines as modulators of zinc affinity and reactivity. In: 1st Georgian Bay International Conference on Bioinorganic Chemistry, Parry Sound, Canada, 22-25 May 2007. Published in: Journal of Inorganic Biochemistry, Vol.102 (No.3). pp. 507-521. doi:10.1016/j.jinorgbio.2007.10.032 ISSN 0162-0134.
James, C. J., Andrianakis, Ioannis, Dillon, James, Mitchell, Philippa, Mould, Richard, Glautier, Steve, O'Connor, Vincent and Holden-Dye, Lindy (2008) Body shape analysis and 2-dimensional cluster representation of C. elegans behaviour: a route to defining complexity in ethanol's modes of action. In: Synaptic Function and Behaviour of C. Elegans Topic Meeting #2, University of Wisconsin, Madison, WI, U.S.A., July, 2008. Published in: Synaptic Function and Behaviour of C. Elegans Topic Meeting #2, Poster Abstracts p. 77.
Dillon, James, Mitchell, Philippa, Bull, Kate, Andrianakis, Ioannis, James, C. J., Glautier, Steve, O'Connor, Vincent and Holden-Dye, Lindy (2008) Concentration-dependent effects of acute and chronic ethanol on C. elegans micro-circuits and behaviour. In: Synaptic Function and Behaviour of C. Elegans Topic Meeting #2, University of Wisconsin, Madison, WI, U.S.A., July, 2008. Published in: Synaptic Function and Behaviour of C. Elegans Topic Meeting #2, Poster Abstracts p. 81.
Andrianakis, Ioannis, Dillon, James, Mitchell, Philippa, Mould, Richard, Glautier, Steve, O'Connor, Vincent, Holden-Dye, Lindy and James, C. J. (2008) A software tool for the analysis of C. elegans electropharyngeograms (EPG). In: Synaptic Function and Behaviour of C. Elegans Topic Meeting #2, University of Wisconsin, Madison, WI, U.S.A., July, 2008. Published in: Synaptic Function and Behaviour of C. Elegans Topic Meeting #2, Poster Abstracts p. 80.
Pinheiro, Teresa J. T. (2006) The role of rafts in the fibrillization and aggregation of prions. In: COST Meeting on Protein - Lipid Interactions, Dubrovnik, Croatia, Oct 06-08, 2005. Published in: Chemistry and Physics of Lipids, Vol.141 (No.1-2). pp. 66-71. doi:10.1016/j.chemphyslip.2006.02.022 ISSN 0009-3084.
White, L. J., Lam, T. J. G. M., Schukken, Y. H., Green, Laura E., Medley, Graham and Chappell, M. J. (Michael J.) (2006) The transmission and control of mastitis in dairy cows: A theoretical approach. In: Meeting of the Society for Veterinary Epidemiology and Preventive Medicine, Warwick, England, 2003. Published in: Preventive Veterinary Medicine, Vol.74 (No.1). pp. 67-83. doi:10.1016/j.prevetmed.2006.01.008 ISSN 0167-5877.
Matsoukas, Ioannis G., Thomas, Brian and Massiah, Andrea J. (2005) ฮฮฟฯฮนฮฑฮบฮฎ ฮบฮฑฮน ฯฯ ฯฮนฮฟฮปฮฟฮณฮนฮบฮฎ ฮฑฮฝฮฌฮปฯ ฯฮท ฯฮทฯ ฮฌฮฝฮธฮนฯฮทฯ. In: 22ฮฟ ฮ ฮฑฮฝฮตฮปฮปฮฎฮฝฮนฮฟ ฮฃฯ ฮฝฮญฮดฯฮนฮฟ ฮฮปฮปฮทฮฝฮนฮบฮฎฯ ฮฯฮฑฮนฯฮตฮฏฮฑฯ ฮฯฮนฯฯฮฎยตฮทฯ ฮฯฯฯฮฟฮบฮทฯฮตฯ ฯฮนฮบฯฮฝ, ฮ ฮฌฯฯฮฑ, แผฮปฮปฮฌฯ-Greece, 19-21 October 2005 doi:10.1029/2004JC002566
Bryson, K., Luck, Michael (Michael M.), Joy, Mike, Jones, D. T., Nicolas, P., Bessieres, P. and Gibrat, J.-F. (2002) From GeneWeaver to Agmial. In: Network Tools and Applications in Biology Workshop on Agents in Bioinformatics (NETTAB 2002), Bologna, Italy, 12-14 Jul 2002
Working or Discussion Paper
Tandonnet, Sophie, Farrell, Maureen C., Koutsovoulos, Georgios, Blaxter, Mark, Parihar, Manish, Sadler, Penny L., Shakes, Diane and Pires-da Silva, Andreฬ Francisco (2017) Gender- and gamete-specific patterns of X chromosome segregation in a three-gendered nematode. Working Paper. BioRxiv: Cold Spring Harbour Laboratory. (Unpublished)
Anderson, Paul E. and Smith, J. Q. (2006) Bayesian representations using chain event graphs. Working Paper. Coventry: University of Warwick. Centre for Research in Statistical Methodology. Working papers, Vol.2006 (No.8).
Anderson, Paul E., Smith, J. Q., Edwards, Kieron D. and Millar, A. J. (2006) Guided conjugate Bayesian clustering for uncovering rhythmically expressed genes. Working Paper. Coventry: University of Warwick. Centre for Research in Statistical Methodology. Working papers, Vol.2006 (No.7).
Anderson, Paul E. and Smith, J. Q. (2005) A graphical framework for representing the semantics of asymmetric models. Working Paper. Coventry: University of Warwick. Centre for Research in Statistical Methodology. Working papers, Vol.2005 (No.12).
Journal Item
Yuan, Ke, Girolami, Mark and Niranjan, Mahesan (2012) Markov chain Monte Carlo methods for state-space models with point process observations. Neural Computation, Volume 24 (Number 6). pp. 1462-1486. ISSN 0899-7667 doi:10.1162/NECO_a_00281
Bruce, Gareth, Gu, Mei, Shi, Nongnong, Liu, Yule and Hong, Yiguo (2011) Influence of retinoblastoma-related gene silencing on the initiation of DNA replication by African cassava mosaic virus Rep in cells of mature leaves in Nicotiana benthamiana plants. Virology Journal, Vol.8 (No.1). p. 561. ISSN 1743-422X doi:10.1186/1743-422X-8-561
Bastow, Ruth and Leonelli, Sabina (2010) Sustainable digital infrastructure. EMBO reports, Vol.11 (No.10). pp. 730-734. ISSN 1469-221X doi:10.1038/embor.2010.145
Berger, Cedric N., Sodha, Samir V., Shaw, Robert K., Griffin, Patricia M., Pink, David, Hand, Paul and Frankel, Gad (2010) Fresh fruit and vegetables as vehicles for the transmission of human pathogens. Environmental Microbiology, Vol.12 (No.9). pp. 2385-2397. ISSN 1462-2912 doi:10.1111/j.1462-2920.2010.02297.x
Spiller, David G., Wood, Christopher D., Rand, D. A. (David A.) and White, Michael R. H. (2010) Measurement of single-cell dynamics. Nature, Vol.465 (No.7299). pp. 736-745. ISSN 0028-0836 doi:10.1038/nature09232
Laurencin, Danielle, Wong, Alan, Chrzanowski, Wojciech, Knowles, Jonathan C., Qiu, Dong, Pickup, David M., Newport, Robert J., Gan, Zhehong, Duer, Melinda J. and Smith, Mark E. (2010) Probing the calcium and sodium local environment in bones and teeth using multinuclear solid state NMR and X-ray absorption spectroscopy. Physical Chemistry Chemical Physics, Vol.12 (No.5). pp. 1081-1091. ISSN 1463-9076 doi:10.1039/b915708e
Hultรฉn, Maj A., Patel, Suketu, Jonasson, Jon and Iwarsson, Erik (2010) On the origin of the maternal age effect in trisomy 21 Down syndrome : the Oocyte Mosaicism Selection model. Reproduction, Vol.139 (No.1). pp. 1-9. ISSN 1470-1626 doi:10.1530/REP-09-0088
Blindauer, Claudia A. and Leszczyszyn, Oksana I. (2010) Metallothioneins : unparalleled diversity in structures and functions for metal ion homeostasis and more. Natural Product Reports, Vol.27 (No.5). pp. 720-741. ISSN 0265-0568 doi:10.1039/b906685n
Sparkes, Imogen A., Frigerio, Lorenzo, Tolley, Nicholas and Hawes, C. R. (2009) The plant endoplasmic reticulum: a cell-wide web. Biochemical Journal, Vol.423 (No.2). pp. 145-155. ISSN 0264-6021 doi:10.1042/BJ20091113
Corre, Christophe and Challis, Gregory L. (2009) New natural product biosynthetic chemistry discovered by genome mining. Natural Product Reports, Vol.26 (No.8). pp. 977-986. ISSN 0265-0568 doi:10.1039/b713024b
Hung, Ivan, Uldry, Anne-Christine, Becker-Baldus, Johanna, Webber, Amy L., Wong, Alan, Smith, Mark E., Joyce, Sin A., Yates, Jonathan R., Pickard, Chris J., Dupree, Ray and Brown, Steven P. (2009) Probing heteronuclear N-15-O-17 and C-13-O-17 connectivities and proximities by solid-state NMR spectroscopy. Journal of the American Chemical Society, Vol.131 (No.5). pp. 1820-1834. ISSN 0002-7863 doi:10.1021/ja805898d
Oves-Costales, Daniel, Kadi, Nadia and Challis, Gregory L. (2009) The long-overlooked enzymology of a nonribosomal peptide synthetase-independent pathway for virulence-conferring siderophore biosynthesis. Chemical Communications (No.43). pp. 6530-6541. ISSN 1359-7345 doi:10.1039/b913092f
Kyuno, Jun-ichi, Masse, Karine and Jones, E. A. (Elizabeth A.) (2008) A functional screen for genes involved in Xenopus pronephros development. Mechanisms of Development, Volume 125 (Number 7). pp. 571-586. ISSN 0925-4773 doi:10.1016/j.mod.2008.03.001
Pethybridge, Sarah J., Hay, Frank S., Barbara, Dez J., Eastwell, Kenneth C. and Wilson, Calum R. (2008) Viruses and viroids infecting hop : significance, epidemiology, and management. Plant Disease, Vol.92 (No.3). pp. 324-338. ISSN 0191-2917 doi:10.1094/PDIS-92-3-0324
Kent, Christopher and Lamberts, Koen (2008) The encoding-retrieval relationship : retrieval as mental simulation. Trends in Cognitive Sciences, Vol.12 (No.3). pp. 92-98. ISSN 1364-6613 doi:10.1016/j.tics.2007.12.004
Seymour, G. B. (Graham B.), Poole, Mervin, Manning, Kenneth and King, Graham J. (2008) Genetics and epigenetics of fruit development and ripening. Current Opinion in Plant Biology, Vol.11 (No.1). pp. 58-63. ISSN 1369-5266 doi:10.1016/j.pbi.2007.09.003
Holdsworth, Michael J., Finch-Savage, William E., Grappin, Phillipe and Job, Dominique (2008) Post-genomics dissection of seed dormancy and germination. Trends in Plant Science, Vol.13 (No.1). pp. 7-13. ISSN 1360-1385 doi:10.1016/j.tplants.2007.11.002
Brown, G. D. A., Neath, Ian and Chater, Nick (2007) A temporal ratio model of memory. Psychological Review, Vol.114 (No.3). pp. 539-576. ISSN 0033-295X doi:10.1037/0033-295X.114.3.539
Brown, G. D. A. (Gordon D. A.) and Lamberts, Koen (2003) Double dissociations, models and serial position curves. Cortex, Vol.39 (No.1). pp. 148-152. ISSN 0010-9452 doi:10.1016/S0010-9452(08)70088-1
Submitted Journal Article
Dobrzanska, Dorota A., Cooper, Amy L., Dowson, Christopher G., Evans, Stephen D., Haynes, Tommy, Johnson, Benjamin R. G., Stec, Helena M., Taylor, Paul C. and Marsh, Andrew (2012) Protein-adhesive and protein-resistant functionalized silicon surfaces. Langmuir . (Submitted)
(2010) The Scottish Structural Proteomics Facility : targets, methods and outputs. Journal of Structural and Functional Genomics, Vol.11 (No.2). pp. 167-180. doi:10.1007/s10969-010-9090-y