Journal Article

Feng, Song, Ollivier, Julien F., Swain, Peter S. and Soyer, Orkun S. (2015) BioJazz : In silico evolution of cellular networks with unbounded complexity using rule-based modeling. Nucleic Acids Research, 43 (19). e123. doi:10.1093/nar/gkv595

Valero-Rello, Ana, Hapeshi, Alexia , Anastasi, Elisa, Alvarez, S., Scortti, Mariela M., Meijer, Wim G., MacArthur, Iain and Vázquez-Boland, José A. (2015) An invertron-like linear plasmid mediates intracellular survival and virulence in bovine isolates of Rhodococcus equi. Infection and Immunity, Volume 83 (Number 3). pp. 2725-2737. doi:10.1128/IAI.00376-15

Amin, Munia, Kothamachu, Varun B., Feliu, Elisenda, Scharf, Birgit E., Porter, Steven L. and Soyer, Orkun S. (2014) Phosphate sink containing two-component signaling systems as tunable threshold devices. PLoS Computational Biology, Volume 10 (Number 10). Article number e1003890. doi:10.1371/journal.pcbi.1003890

Soyer, Orkun S. and Goldstein, Richard A. (2011) Evolution of response dynamics underlying bacterial chemotaxis. BMC Evolutionary Biology, 11 (1). 240. doi:10.1186/1471-2148-11-240

Csikasz-Nagy, A., Cardelli, L. and Soyer, Orkun S. (2010) Response dynamics of phosphorelays suggest their potential utility in cell signalling. Journal of The Royal Society Interface, 8 (57). pp. 480-488. doi:10.1098/rsif.2010.0336