Journal Article

Abbasi, Wajid Arshad, Asif, Amina, Ben-Hur, Asa and Minhas, Fayyaz ul Amir Afsar (2018) Learning protein binding affinity using privileged information. BMC Bioinformatics, 19 (1). 425. doi:10.1186/s12859-018-2448-z

Adib, Rozita, Montgomery, Jessica, Atherton, Joseph, O'Regan, Laura, Richards, Mark W., Straatman, Kees, Roth, Daniel, Straube, Anne, Bayliss, Richard, Moores, Carolyn and Fry, Andrew M. (2019) Mitotic phosphorylation by NEK6 and NEK7 reduces the microtubule affinity of EML4 to promote chromosome congression. Science Signalling, 12 (594). eaaw2939. doi:10.1126/scisignal.aaw2939

Ahmad, Asif, Asif, Amina, Rajpoot, Nasir, Arif, Muhammad and Minhas, Fayyaz ul Amir Afsar (2018) Correlation filters for detection of cellular nuclei in histopathology images. Journal of Medical Systems, 42 (7). doi:10.1007/s10916-017-0863-8

Alam, Mohammad Tauqee, Takano, Eriko and Breitling, Rainer (2011) Prioritizing orphan proteins for further study using phylogenomics and gene expression profiles in Streptomyces coelicolor. BMC Research Notes, 4 . p. 325. doi:10.1186/1756-0500-4-325

Alberti, Fabrizio and Corre, Christophe (2019) Editing streptomycete genomes in the CRISPR/Cas9 age. Natural Product Reports, 36 (9). pp. 1237-1248. doi:10.1039/c8np00081f

Albornoz, Felipe E., Hayes, Patrick E., Orchard, Suzanne, Clode, Peta L., Nazeri, Nazanin, Standish, Rachel J., Dickie, Ian A., Bending, G. D., Hilton, Sally and Ryan, Megan H. (2020) First cryo-scanning electron microscopy images and X-ray microanalyses of mucoromycotinian fine root endophytes in vascular plants. Frontiers in Microbiology, 11 . 2018. doi:10.3389/fmicb.2020.02018

Alguel, Yilmaz, Amillis, Sotiris, Leung, James, Lambrinidis, George, Capaldi, Stefano, Scull, Nicola J., Craven, Gregory, Iwata, So, Armstrong, Alan, Mikros, Emmanuel, Diallinas, George, Cameron, Alexander and Byrne, Bernadette (2016) Structure of eukaryotic purine/H+ symporter UapA suggests a role for homodimerization in transport activity. Nature Communications, 7 . pp. 1-9. 11336. doi:10.1038/ncomms11336

(2020) FKBPL-based peptide, ALM201, targets angiogenesis and cancer stem cells in ovarian cancer. British Journal of Cancer, 122 . pp. 361-371. doi:10.1038/s41416-019-0649-5

Appanah, Rowin, Lones, E. C., Aiello, U., Libri, D. and De Piccoli, Giacomo (2020) Sen1 is recruited to replication forks via Ctf4 and Mrc1 and promotes genome stability. Cell Reports, 30 (7). P2094-2105.E9. doi:10.1016/j.celrep.2020.01.087

Armitage, Andrew D., Cockerton, Helen M., Sreenivasaprasad, Surapareddy, Woodhall, James, Lane, Charles R., Harrison, Richard J. and Clarkson, John P. (2020) Genomics evolutionary history and diagnostics of the Alternaria alternata Species group including apple and Asian pear pathotypes. Frontiers in Microbiology, 10 . 3124. doi:10.3389/fmicb.2019.03124

Armond, Jonathan W., Harry, Edward, McAinsh, Andrew D. and Burroughs, Nigel John (2015) Inferring the forces controlling metaphase kinetochore oscillations by reverse engineering system dynamics. PLoS Computational Biology, 11 (11). e1004607. doi:10.1371/journal.pcbi.1004607

Arrieta, Jorge, Polin, Marco, Saleta-Piersanti, Ramon and Tuval, Idan (2019) Light control of localized photobioconvection. Physical Review Letters, 123 (15). 158101. doi:10.1103/PhysRevLett.123.158101

Arumugam, Prakash (2010) Homolog pairing during meiosis : dyneins on the move. Cell Cycle, Vol.9 (No.11). pp. 2059-2062. doi:10.4161/cc.9.11.11856

Ateweberhan, Mebrahtu, McClanahan, T. R., Graham, N. A. J. and Sheppard, Charles (Charles R. C.) (2011) Episodic heterogeneous decline and recovery of coral cover in the Indian Ocean. Coral Reefs, Vol.30 (No.3). pp. 739-752. doi:10.1007/s00338-011-0775-x

Atkins, Christophe J., Seow, David, Burns, Gerard, Town, James, Hand, Rachel A., Lester, Daniel, Cameron, Neil R., Haddleton, David M. and Eissa, Ahmed M. (2020) Branched macromonomers from catalytic chain transfer polymerisation (CCTP) as precursors for emulsion-templated porous polymers. Polymer Chemistry, 11 (23). pp. 3841-3848. doi:10.1039/d0py00539h

Auckland, Philip, Clarke, Nicholas I., Royle, Stephen J. and McAinsh, Andrew D. (2017) Congressing kinetochores progressively load Ska complexes to prevent force-dependent detachment. The Journal of Cell Biology, 216 (6). pp. 1623-1639. doi:10.1083/jcb.201607096

Auckland, Philip and McAinsh, Andrew D. (2015) Building an integrated model of chromosome congression. Journal of Cell Science, 128 (18). pp. 3363-3374. doi:10.1242/jcs.169367

Auckland, Philip, Roscioli, Emanuele, Coker, H. L. E. and McAinsh, Andrew D. (2020) CENP-F stabilizes kinetochore-microtubule attachments and limits dynein stripping of corona cargoes. Journal of Cell Biology, 219 (5). e201905018. doi:10.1083/jcb.201905018

Badham, Stephen P., Poirier, M., Gandhi, N., Hadjivassiliou, A. and Maylor, Elizabeth A. (2016) Aging and memory as discrimination : influences of encoding specificity, cue overload, and prior knowledge. Psychology and Aging, 31 (7). pp. 758-770. doi:10.1037/pag0000126

Bailey, Trisha L., Hernandez-Fernaud, Juan Ramon and Gibson, Matthew I. (2021) Proline pre-conditioning of cell monolayers increases post-thaw recovery and viability by distinct mechanisms to other osmolytes. RSC Medicinal Chemistry . doi:10.1039/D1MD00078K (In Press)

Bailey, Trisha L., Stubbs, Christopher D., Murray, Kathryn, Tomás, Ruben M. F., Otten, Lucienne and Gibson, Matthew I. (2019) Synthetically scalable poly(ampholyte) which dramatically enhances cellular cryopreservation. Biomacromolecules, 20 (8). pp. 3104-3114. doi:10.1021/acs.biomac.9b00681

Bancroft, James M., Auckland, Philip, Samora, C. P. and McAinsh, Andrew D. (2015) Chromosome congression is promoted by CENP-Q- and CENP-E-dependent pathways. Journal of Cell Science, 128 (1). pp. 171-184. doi:10.1242/jcs.163659

Bandi, Bharath, Santillana, Begona, Tiekink, Wouter, Koura, Nadia, Williams, Mark A. and Srirangam, Prakash (2020) 2D automated SEM and 3D X-ray computed tomography study on inclusion analysis of steels. Ironmaking & Steelmaking, 47 (1). pp. 47-50. doi:10.1080/03019233.2019.1652437

Baniukiewicz, Piotr, Lutton, E. Josiah, Collier, Sharon and Bretschneider, Till (2019) Generative adversarial networks for augmenting training data of microscopic cell images. Frontiers in Computer Science, 1 . 10. doi:10.3389/fcomp.2019.00010

Barneda, David, Planas-Iglesias, Joan, Gaspar, Maria L., Mohammadyani, Dariush, Prasannan, Sunil, Dormann, Dirk, Han, Gil-Soo, Jesch, Stephen A., Carman, George M., Kagan, Valerian, Parker, Malcolm G., Ktistakis, Nicholas T., Klein-Seetharaman, Judith, Dixon, Ann M., Henry, Susan A. and Christian, Mark (2015) The brown adipocyte protein CIDEA promotes lipid droplet fusion via a phosphatidic acid-binding amphipathic helix. eLife, 4 . doi:10.7554/eLife.07485

Beal, Robert, Alonso-Carriazo, Fernandez, Grammatopoulos, Dimitris, Matter, Karl and Balda, Maria S. (2021) ARHGEF18/p114RhoGEF coordinates PKA/CREB signalling and actomyosin remodelling to promote trophoblast cell-cell fusion during placenta morphogenesis. Frontiers in Cell and Developmental Biology, 9 . 658006. doi:10.3389/fcell.2021.658006

Benarroch, Jonatan M. and Asally, Munehiro (2020) The microbiologist’s guide to membrane potential dynamics. Trends in Microbiology . doi:10.1016/j.tim.2019.12.008 (In Press)

Bentley, Cameron Luke, Kang, Minkyung and Unwin, Patrick R. (2017) Scanning electrochemical cell microscopy : new perspectives on electrode processes in action. Current Opinion in Electrochemistry, 6 (1). pp. 23-30. doi:10.1016/j.coelec.2017.06.011

Bentley, Cameron Luke and Unwin, Patrick R. (2018) Nanoscale electrochemical movies and synchronous topographical mapping of electrocatalytic materials. Faraday Discussions, 210 . 365-379 . doi:10.1039/c8fd00028j

Benton, Matthew Alan, Frey, Nadine, Nunes da Fonseca, Rodrigo , von Levetzow, Cornelia, Stappert, Dominik, Hakeemi, Muhammad Salim, Conrads, Kai H., Pechmann, Matthias, Panfilio, Kristen A., Lynch, Jeremy A. and Roth, Siegfried (2019) Fog signaling has diverse roles in epithelial morphogenesis in insects. eLife, 8 . e47346. doi:10.7554/elife.47346

Berg, Hugo van den (2018) Darwin endures, despite disparagement. Science Progress, 101 (1). pp. 32-51. doi:10.3184/003685018X15166188312386

Berg, Hugo van den (2017) Inceptions of biomathematics from Lotka to Thom. Science Progress, 10 (1). pp. 45-62.

Bi, Dadi, Almpanis, Apostolos, Noel, Adam, Deng, Yansha and Schober, Robert (2021) A survey of molecular communication in cell biology : establishing a new hierarchy for interdisciplinary applications. IEEE Communications Surveys & Tutorials . doi:10.1109/COMST.2021.3066117 (In Press)

Biggs, Caroline I., Bailey, Trisha L., Graham, Ben, Stubbs, Christopher D., Fayter, Alice and Gibson, Matthew I. (2017) Polymer mimics of biomacromolecular antifreezes. Nature Communications, 8 . 1546. doi:10.1038/s41467-017-01421-7

Bisketzi, Evangelia, Branford, Dominic and Datta, Animesh (2019) Quantum limits of localisation microscopy. New Journal of Physics, 21 (12). 123032. doi:10.1088/1367-2630/ab58a0

Blowey, Phil J., Haags, A., Rochford, L. A., Felter, J., Warr, Daniel, Duncan, D. A., Lee, T. -L., Costantini, G., Kumpf, C. and Woodruff, D. P. (2019) Characterisation of growth & structure of TCNQ phases on Ag(111). Physical Review Materials, 3 . 116001. doi:10.1103/PhysRevMaterials.3.116001

Boardman, Felicity K. and Hale, Rachel (2018) Responsibility and identity and genomic sequencing : a comparison of published recommendations and patient perspectives on accepting or declining incidental findings. Molecular Genetics and Genomic Medicine, 6 (6). pp. 1079-1096. doi:10.1002/mgg3.485

Bolton, Louise, Reiman, Anne, Lucas, Katie, Timms, Judith and Cree, Ian A. (2015) KRAS mutation analysis by PCR : a comparison of two methods. PLoS One, Volume 10 (Number 1). Article number e0115672. doi:10.1371/journal.pone.0115672

Boltze, Johannes, Abe, Koji, Clarkson, Andrew N., Detante, Olivier, Pimentel-Coelho, Pedro M., Rosado-de-Castro, Paulo H. and Janowski, Miroslaw (2020) Cell-based therapies for stroke : promising solution or dead end? Frontiers in Neurology . doi:10.3389/fneur.2020.00171 (In Press)

Boltze, Johannes, Didwischus, Nadine, Li, Shengcai, Jolkkonen, Jukka and Taguchi, Akihiko (2020) Increased migratory and homing abilities of neural and mesenchymal stem cell populations by transient cell modifications : preclinical progress and clinical relevanc. EBioMedicine, 60 . 103022. doi:10.1016/j.ebiom.2020.103022

(2019) Stem cells as an emerging paradigm in stroke 4 : advancing and accelerating preclinical research. Stroke, 50 (11). pp. 3299-3306. doi:10.1161/STROKEAHA.119.025436

Boltze, Johannes, Nitzsche, Franziska, Jolkkonen, Jukka, Weise, Gesa, Pösel, Claudia, Nitzsche, Björn and Wagner, Daniel-Christoph (2017) Concise review : increasing the validity of cerebrovascular disease models and experimental methods for translational stem cell research. Stem Cells, 35 (5). pp. 1141-1153. doi:10.1002/stem.2595

Bortz, Gaby, Vasen, Federico and Rosemann, Achim (2017) Entre oportunidad y riesgo : regulación, expectativas y políticas CTI para células madre en Argentina. Ciencia, Docencia y Tecnología, 28 (54). pp. 38-74.

Breeze, Emily, Dzimitrowicz, Natasha, Kriechbaumer, Verena, Brooks, Rhiannon, Botchway, Stanley W., Brady, Jacob P., Hawes, Chris, Dixon, Ann M., Schnell, Jason R., Fricker, Mark D. and Frigerio, Lorenzo (2016) A C-terminal amphipathic helix is necessary for the in-vivo tubule-shaping function of plant reticulon. Proceedings of the National Academy of Sciences of the United States of America, 113 (39). pp. 10902-10907. doi:10.1073/pnas.1605434113

Brooks, Rhiannon L., Mistry, Chandni S. and Dixon, Ann M. (2021) Curvature sensing amphipathic helix in the C-terminus of RTNLB13 is conserved in all endoplasmic reticulum shaping reticulons in Arabidopsis thaliana. Scientific Reports, 11 (1). 6326. doi:10.1038/s41598-021-85866-3

Brumley, Douglas R., Bruot, Nicolas, Kotar, Jurij, Goldstein, Raymond E., Cicuta, Pietro and Polin, Marco (2016) Long-range interactions, wobbles, and phase defects in chains of model cilia. Physical Review Fluids, 1 (8). 081201(R). doi:10.1103/PhysRevFluids.1.081201

Brödel, Andreas K., Isalan, Mark and Jaramillo, Alfonso (2018) Engineering of biomolecules by bacteriophage directed evolution. Current Opinion in Biotechnology, 51 . pp. 32-38. doi:10.1016/j.copbio.2017.11.004

Buchsteiner, P., Harmsen, L., Ciomaga Hatnean, Monica, Balakrishnan, Geetha and Wenderoth, M. (2020) Surface analysis of the PrB6 (001) cleavage plane by scanning tunneling microscopy and spectroscopy. Physical Review B, 102 (20). 205403. doi:10.1103/PhysRevB.102.205403

Buchsteiner, P., Sohn, F., Horstmann, J. G., Voigt, J., Ciomaga Hatnean, Monica, Balakrishnan, Geetha, Ropers, C., Blöchl, P. E. and Wenderoth, M. (2019) Surface resonance of the (2×1) reconstructed lanthanum hexaboride (001)-cleavage plane : a combined STM and DFT study. Physical Review B, 100 (20). 205407. doi:10.1103/PhysRevB.100.205407

Buhagiar, Kurt, Templeton, Georgia, Blyth, Henrietta, Dey, Mrinalini and Giacco, Domenico (2020) Mortality risk from long-term treatment with antipsychotic polypharmacy vs monotherapy among adults with serious mental illness : a systematic review and meta-analysis of observational studies. Schizophrenia Research . doi:10.1016/j.schres.2020.08.026 (In Press)

Burroughs, Nigel John, Harry, Edward and McAinsh, Andrew D. (2015) Super-resolution kinetochore tracking reveals the mechanisms of human sister kinetochore directional switching. eLife, 4 . e09500. doi:10.7554/eLife.09500

Burt, Alister, Cassidy, C. Keith, Stansfeld, Phillip J. and Gutsche, Irina (2021) Alternative architecture of the E. coli chemosensory array. Biomolecules, 11 (4). e495. doi:10.3390/biom11040495

(2019) The structural basis of lipid scrambling and inactivation in the endoplasmic reticulum scramblase TMEM16K. Nature Communications, 10 (1). 3956 . doi:10.1038/s41467-019-11753-1

Cappuccio, Francesco, Ji, Chen, Donfrancesco, Chiara, Palmieri, Luigi, Ippolito, Renato, Vanuzzo, Diego, Giampaoli, Simona and Strazzullo, Pasquale (2015) Geographic and socioeconomic variation of sodium and potassium intake in Italy : results from the MINISAL-GIRCSI programme. BMJ Open, 5 (9). pp. 1-11. e007467. doi:10.1136/bmjopen-2014-007467

Casillo, Angela, Parrilli, Ermenegilda, Sannino, Filomena, Mitchell, Daniel E., Gibson, Matthew I., Marino, Gennaro, Lanzetta, Rosa, Parilli, Michelangelo, Cosconati, Sandro, Novellino, Ettore, Randazzo, Antonio, Tutino, Maria and Corsaro, Michela (2017) Structure-activity relationship of the exopolysaccharide from a psychrophilic bacterium : a strategy for cryoprotection. Carbohydrate Polymers, 156 . pp. 364-371. doi:10.1016/j.carbpol.2016.09.037

Cassidy, Keith, Himes, Benjamin A., Sun, Dapeng, Ma, Jun, Zhao, Gongpu, Parkinson, John S., Stansfeld, Phillip J., Luthey-Schulten, Z. and Zhang, Peijun (2020) Structure and dynamics of the E. coli chemotaxis core signaling complex by cryo-electron tomography and molecular simulations. Communications Biology, 3 (24). doi:10.1038/s42003-019-0748-0

Cavallaro, Massimo, Walsh, Mark D., Jones, Matt, Teahan, James, Tiberi, Simone, Finkenstädt, Bärbel and Hebenstreit, Daniel (2021) 3’-5’ crosstalk contributes to transcriptional bursting. Genome Biology, 22 . 56. doi:10.1186/s13059-020-02227-5

Cecchetti, Cristina, Scull, Nicola J., Mohan, Thotegowdanapalya C., Alguel, Yilmaz, Jones, Alexandra M. C., Cameron, Alexander D. and Byrne, Bernadette (2021) Transfer of stabilising mutations between different secondary active transporter families. FEBS Open Bio, 11 (6). pp. 1685-1694. doi:10.1002/2211-5463.13168

Chapman, Lloyd A. C., Whiteley, Jonathan P., Byrne, Helen M., Waters, Sarah L. and Shipley, Rebecca J. (2017) Mathematical modelling of cell layer growth in a hollow fibre bioreactor. Journal of Theoretical Biologyy, 418 . pp. 36-56. doi:10.1016/j.jtbi.2017.01.016

Chellan , Prinessa and Sadler, P. J. (2015) The elements of life and medicines. Philosophical Transactions of the Royal Society A : Mathematical, Physical and Engineering Sciences, Volume 373 (Number 2037). Article number 20140182. doi:10.1098/rsta.2014.0182

Chen, Hu, Wadsworth, Andrew, Ma, Chun, Nanni, Alice, Zhang, Weimin, Nikolka, Mark, Luci, Alexander M. T., Perdigao, Luis M. A., Thorley, Karl J., Cendra, Camila, Larson, Bryon, Rumbles, Garry, Anthopoulos, Thomas D., Salleo, Alberto, Costantini, Giovanni, Sirringhaus, Henning and McCulloch, Iain (2019) The effect of ring expansion in thienobenzo[b]indacenodithiophene polymers for organic field-effect transistors. Journal of the American Chemical Society, 141 (47). pp. 18806-18813. doi:10.1021/jacs.9b09367

Chen, Jing, Dick, Richard, Lin, Jih-Gaw and Gu, Ji-Dong (2016) Current advances in molecular methods for detection of nitrite-dependent anaerobic methane oxidizing bacteria in natural environments. Applied Microbiology and Biotechnology, 100 (23). pp. 9845-9860. doi:10.1007/s00253-016-7853-5

Chhun, Audam, Sousoni, Despoina, Aguilo-Ferretjans, Maria del Mar, Song, Lijiang, Corre, Christophe and Christie-Oleza, Joseph A. (2021) Phytoplankton trigger the production of cryptic metabolites in the marine actinobacterium Salinispora tropica. Microbial Biotechnology, 14 (1). pp. 291-306. doi:10.1111/1751-7915.13722

Chong, Jeronica, Amourda, Christopher and Saunders, Timothy E. (2018) Temporal development of Drosophila embryos is highly robust across a wide temperature range. Journal of The Royal Society Interface, 15 (144). 20180304. doi:10.1098/rsif.2018.0304

Christie-Oleza, Joseph Alexander, Sousoni, Despoina, Lloyd, Matthew, Armengaud, Jean and Scanlan, David J. (2017) Nutrient recycling facilitates long-term stability of marine microbial phototroph–heterotroph interactions. Nature microbiology, 2 . 17100. doi:10.1038/nmicrobiol.2017.100

Clokie, Martha R. J., Millard, Andrew D. and Mann, Nicholas H. (2010) T4 genes in the marine ecosystem: studies of the T4-like cyanophages and their role in marine ecology. Virology Journal, Volume 7 . Article number 291. doi:10.1186/1743-422X-7-291

Colley, Emily, Devall, Adam J., Williams, Helen, Hamilton, Susan, Smith, Paul, Morgan, Neil V., Quenby, Siobhan, Coomarasamy, Arri and Allen, Stephanie (2020) Cell-free DNA in the investigation of miscarriage. Journal of Clinical Medicine, 9 (11). 3428. doi:10.3390/jcm9113428

Connahs, Heidi, Tlili, Sham, van Creij, Jelle, Loo, Tricia Y. J., Banerjee, Tirtha Das, Saunders, Timothy E. and Monteiro, Antónia (2019) Activation of butterfly eyespots by Distal-less is consistent with a reaction-diffusion process. Development, 146 (9). dev169367. doi:10.1242/dev.169367

Cook, Sarah, Price, Oliver, King, Andrew, Finnegan, Chris, van Egmond, Roger, Schäfer, Hendrik, Pearson, Jonathan M., Abolfathi, Soroush and Bending, G. D. (2020) Bedform characteristics and biofilm community development interact to modify hyporheic exchange. Science of The Total Environment . doi:10.1016/j.scitotenv.2020.141397 (In Press)

Cooke, Emma J., Savage, Richard S., Kirk, Paul, Darkins, Robert and Wild, David L. (2011) Bayesian hierarchical clustering for microarray time series data with replicates and outlier measurements. BMC Bioinformatics, Vol.12 (No.1). p. 399. doi:10.1186/1471-2105-12-399

Cooper, Daniel D. and Frenguelli, Bruno G. (2021) The influence of sensory experience on the glutamatergic synapse. Neuropharmacology, 193 . 108620. doi:10.1016/j.neuropharm.2021.108620

Corlett, Emily K., Blade, Helen, Hughes, Leslie P., Sidebottom, Philip J., Walker, David, Walton, Richard I. and Brown, Steven P. (2020) 5-amino-2-methylpyridinium hydrogen fumarate : an XRD and NMR crystallography analysis. Magnetic Resonance in Chemistry . doi:10.1002/mrc.5021 (In Press)

Coverdale, James P. C., Barnett, James P., Dr., Adamu, Adamu H., Griffiths, Ellie, Stewart, Alan J. S. and Blindauer, Claudia A. (2019) A metalloproteomic analysis of interactions between plasma proteins and zinc : elevated fatty acid levels affect zinc distribution. Metallomics, 11 (11). pp. 1805-1819. doi:10.1039/c9mt00177h

Cremin, Kelsey , Jones, Bryn, Teahan, James, Meloni, Gabriel N., Perry, David, Zerfass, Christian, Asally, Munehiro, Soyer, Orkun S. and Unwin, Patrick R. (2020) Scanning ion conductance microscopy reveals differences in the ionic environments of gram-positive and negative bacteria. Analytical Chemistry, 92 (24). pp. 16024-16032. doi:10.1021/acs.analchem.0c03653

Cribdon, Becky, Ware, Roselyn, Smith, Oliver, Gaffney, Vincent and Allaby, Robin G. (2020) PIA : more accurate taxonomic assignment of metagenomic data demonstrated on sedaDNA from the North sea. Frontiers in Ecology and Evolution, 8 . 84. doi:10.3389/fevo.2020.00084

Curran, Fraser M., Bhalraam, U., Mohan, Mohapradeep, Singh, Jagdeep S., Anker, Stefan D., Dickstein, Kenneth, Doney, Alexander S., Filippatos, Gerasimos, George, Jacob, Metra, Marco, Ng, Leong L., Palmer, Colin N., Samani, Nilesh J., Veldhuisen, Dirk J., Voors, Adriaan A., Lang, Chim C. and Mordi, Ify R. (2021) Neutrophil‐to‐lymphocyte ratio and outcomes in patients with new‐onset or worsening heart failure with reduced and preserved ejection fraction. ESC Heart Failure . doi:10.1002/ehf2.13424 (In Press)

Dacheux, Estelle, Malys, Naglis, Meng, Xiang, Ramachandran, Vinoy, Mendes, Pedro and McCarthy, John E. G. (2017) Translation initiation events on structured eukaryotic mRNAs generate gene expression noise. Nucleic Acids Research, 45 (11). pp. 6981-6992. doi:10.1093/nar/gkx430

Dale, Nicholas (2021) CO2 sensing by Connexin26 and its role in the control of breathing. Interface Focus . doi:10.1098/rsfs.2020.0029 (In Press)

Dangerfield, C. E., Whalley, A. Elizabeth, Hanley, N. and Gilligan, C. A. (2018) What a difference a stochastic process makes : epidemiological-based real options models of optimal treatment of disease. Environmental and Resource Economics, 70 (3). pp. 691-711. doi:10.1007/s10640-017-0168-x

Dannhauser, Philip N., Camus, Stéphane M., Sakamoto, Kazuho, Sadacca, L. Amanda, Torres, Jorge A., Camus, Marine D., Briant, Kit, Vassilopoulos, Stéphane, Rothnie, Alice, Smith, Corinne J. and Brodsky, Frances M. (2017) CHC22 and CHC17 clathrins have distinct biochemical properties and display differential regulation and function. Journal of Biological Chemistry, 292 . pp. 20834-20844. doi:10.1074/jbc.M117.816256

Dashti, Yousef, Nakou, Ioanna, Mullins, Alex, Webster, Gordon, Jian, Xinyun, Mahenthiralingam, Eshwar and Challis, Gregory L. (2020) Discovery and biosynthesis of bolagladins : unusual lipodepsipeptides from Burkholderia gladioli clinical isolates. Angewandte Chemie International Edition, 59 (48). pp. 21553-21561. doi:10.1002/anie.202009110

Datta, Samik and Blanchard, J. L. (Julia L.) (2016) The effects of seasonal processes on size spectrum dynamics. Canadian Journal of Fisheries and Aquatic Sciences, 73 (4). pp. 598-610. doi:10.1139/cjfas-2015-0468

Daviddi, Enrico, Chen, Zhiting, Massani, Brooke Beam, Lee, Jaemin, Bentley, Cameron Luke, Unwin, Patrick R. and Ratcliff, Erin L. (2019) Nanoscale visualization and multiscale electrochemical analysis of conductive polymer electrodes. ACS Nano, 13 (11). pp. 13271-13284. doi:10.1021/acsnano.9b06302

Davies, Philip, Jones, Matt, Liu, Juntai and Hebenstreit, Daniel (2021) Anti-bias training for (sc)RNA-seq : experimental and computational approaches to improve precision. Briefings in Bioinformatics . bbab148. doi:10.1093/bib/bbab148 (In Press)

Davies, Tim, Kodera, Noriyuki, Kaminski Schierle, Gabriele S., Rees, Eric, Erdelyi, Miklos, Kaminski, Clemens F., Ando, Toshio and Mishima, Masanori (2015) CYK4 promotes antiparallel microtubule bundling by optimizing MKLP1 neck conformation. PLoS Biology, Volume 13 (Number 4). Article number e1002121. doi:10.1371/journal.pbio.1002121

De la Bellacasa, María Puig‏ (2014) Encountering bioinfrastructure : ecological struggles and the sciences of soil. Social Epistemology, 28 (1). pp. 26-40. doi:10.1080/02691728.2013.862879

Del Genio, Charo I., Romance, Miguel, Criado, Regino and Boccaletti, Stefano (2015) Synchronization in dynamical networks with unconstrained structure switching. Physical Review E, 92 (6). doi:10.1103/PhysRevE.92.062819

Delattre, Hadrien, Sasidharan, Kalesh and Soyer, Orkun S. (2021) Inhibiting the reproduction of SARS-CoV-2 through perturbations in human lung cell metabolic network. Life Science Alliance, 4 (1). e202000869. doi:10.26508/lsa.202000869

Didelot, Xavier, Kendall, Michelle, Xu, Yuanwei, White, Peter J. and McCarthy, Noel D. (2021) Genomic epidemiology analysis of infectious disease outbreaks using transPhylo. Current Protocols, 1 (2). e60. doi:10.1002/cpz1.60

Dimude, Juachi U., Stein, Monja, Andrzejewska, Ewa E., Khalifa, Mohammad S., Gajdosova, Alexandra, Retkute, Renata, Skovgaard, Ole and Rudolph, Christian J. (2018) Origins left, right, and centre : increasing the number of initiation sites in the escherichia coli chromosome. Genes, 9 (8). 376. doi:10.3390/genes9080376

Dixon, Joanna L., Hopkins, Frances E., Stephens, John A. and Schäfer, Hendrik (2020) Seasonal changes in microbial dissolved organic sulfur transformations in coastal waters. Microorganisms, 8 (3). e337. doi:10.3390/microorganisms8030337

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Working or Discussion Paper

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Journal Item

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Dataset

Bailey, Trisha L., Stubbs, Christopher, Murray, Kathryn, Tomás, Ruben M. F., Otten, Lucienne and Gibson, Matthew I. (2019) Data for Synthetically scalable poly(ampholyte) which dramatically enhances cellular cryopreservation. [Dataset]

Brown, Steven P., Walton, Richard I., Walker, David, Sidebottom, Philip J., Hughes, Leslie P., Blade, Helen and Corlett, Emily K. (2020) Data for 5-amino-2-methylpyridinium hydrogen fumarate : an XRD and NMR crystallography analysis. [Dataset]

Chapman, Lloyd A. C. (2017) Data for reproducing figures in Mathematical modelling of cell layer growth in a hollow fibre bioreactor. [Dataset] (Unpublished)

Cobb, Samuel J., Laidlaw, Fraser H.J., West, Geoff, Wood, Georgia, Newton, Mark E., Beanland, Richard and Macpherson, Julie V. (2020) Data for Assessment of acid and thermal oxidation treatments for removing sp2 bonded carbon from the surface of boron diped diamond. [Dataset]

Edmondson, James, Meloni, Gabriel N., Costantini, Giovanni and Unwin, Patrick R. (2020) Data for Synchronous Electrical Conductance and Electron Tunnelling-Scanning Electrochemical Microscopy Measurements. [Dataset]

Freedman, R. B., Desmond, Jasmine L., Heal, Jack W., Sanghera, Narinder, Walker, Kelly L., Wallis, A. Katrine, Wells, Stephen A. and Römer, Rudolf A. (2017) Data for 'Something in the way she moves': the functional significance of flexibility in the multiple roles of protein disulfide isomerase (PDI). [Dataset]

Gibson, Matthew I. and Tomás, Ruben M. F. (2019) Data for Optimization and stability of cell–polymer hybrids obtained by “clicking” synthetic polymers to metabolically labeled cell surface glycans. [Dataset]

Guardiani, Carlo, Fedorenko, Olena A., Roberts, Stephen K. and Khovanov, I. A. (2017) Data for the selectivity of the NaChBac channel: an integrated computational and experimental analysis of sodium and calcium permeation. [Dataset]

Murray, Kathryn and Gibson, Matthew I. (2020) Data for Post-thaw culture and measurement of total cell recovery is crucial in the evaluation of new macromolecular cryoprotectants. [Dataset]

Murray, Kathryn, Tomás, Ruben M. F. and Gibson, Matthew I. (2020) Data for Low DMSO cryopreservation of stem cells enabled by macromolecular cryoprotectants. [Dataset]

Peters, Jonathan J. P., Brunier, Alan, Iqbal, Affan, Alexe, Marin and Sánchez, Ana M. (2020) Data for Structural and photoelectric properties of tensile strained BiFeO3. [Dataset]

Shi, Huayun, Imberti, Cinzia, Huang, Huaiyi, Hands-Portman, Ian and Sadler, Peter J. (2020) Data for Biotinylated photoactive Pt(IV) anticancer complexes. [Dataset]

Tomás, Ruben M. F., Martyn, Benjamin T., Bailey, Trisha L. and Gibson, Matthew I. (2018) Data for Engineering cell surfaces by covalent grafting of synthetic polymers to metabolically-labeled glycans. [Dataset]

Yule, Lewis C., Daviddi, Enrico, West, Geoffrey D., Bentley, Cameron L. and Unwin, Patrick R. (2020) Data for Surface microstructural controls on electrochemical hydrogen absorption at polycrystalline palladium. [Dataset]