Journal Article

Abbasi, Wajid Arshad, Asif, Amina, Ben-Hur, Asa and Minhas, Fayyaz ul Amir Afsar (2018) Learning protein binding affinity using privileged information. BMC Bioinformatics, 19 (1). 425. doi:10.1186/s12859-018-2448-z ISSN 1471-2105.

Acford-Palmer, Holly, Phelan, Jody E., Tadesse, Fitsum G., Kristan, Mojca, Collins, Emma, Spadar, Anton, Walker, Thomas, Bousema, Teun, Messenger, Louisa A., Clark, Taane G. and Campino, Susana (2023) Identification of two insecticide resistance markers in Ethiopian Anopheles stephensi mosquitoes using a multiplex amplicon sequencing assay. Scientific Reports, 13 (1). 5612. doi:10.1038/s41598-023-32336-7 ISSN 2045-2322.

ATCC14028s Study Group (Including: Achtman, Mark, Van den Broeck, Frederik, Cooper, Kerry K., Lemey, Philippe, Parker, Craig T. and Zhou, Zhemin). (2021) Genomic population structure associated with repeated escape of Salmonella enterica ATCC14028s from the laboratory into nature. PLoS Genetics, 17 (9). e1009820. doi:10.1371/journal.pgen.1009820 ISSN 1553-7390.

Achtman, Mark, Zhou, Zhemin, Charlesworth, Jane and Baxter, Laura (2022) EnteroBase : Hierarchical clustering of 100,000s of bacterial genomes into species/sub-species and populations. Philosophical Transactions of the Royal Society B: Biological Sciences, 377 (1861). 20210240. doi:10.1098/rstb.2021.0240 ISSN 0962-8436.

Acman, Mislav, Wang, Ruobing, van Dorp, Lucy, Shaw, Liam P., Wang, Qi, Luhmann, Nina, Yin, Yuyao, Sun, Shijun, Chen, Hongbin, Wang, Hui and Balloux, Francois (2022) Role of mobile genetic elements in the global dissemination of the carbapenem resistance gene bla NDM. Nature Communications, 13 (1). 1131. doi:10.1038/s41467-022-28819-2 ISSN 2041-1723.

Adib, Rozita, Montgomery, Jessica, Atherton, Joseph, O'Regan, Laura, Richards, Mark W., Straatman, Kees, Roth, Daniel, Straube, Anne, Bayliss, Richard, Moores, Carolyn and Fry, Andrew M. (2019) Mitotic phosphorylation by NEK6 and NEK7 reduces the microtubule affinity of EML4 to promote chromosome congression. Science Signalling, 12 (594). eaaw2939. doi:10.1126/scisignal.aaw2939 ISSN 1937-9145.

(2023) Reliability and accuracy of single-molecule FRET studies for characterization of structural dynamics and distances in proteins. Nature Methods, 20 . pp. 523-535. doi:10.1038/s41592-023-01807-0 ISSN 1548-7091.

(2022) Transmission networks of SARS-CoV-2 in coastal Kenya during the first two waves : a retrospective genomic study. eLife, 11 . e71703. doi:10.7554/eLife.71703 ISSN 2050-084X.

Ahmad, Asif, Asif, Amina, Rajpoot, Nasir, Arif, Muhammad and Minhas, Fayyaz ul Amir Afsar (2018) Correlation filters for detection of cellular nuclei in histopathology images. Journal of Medical Systems, 42 (7). doi:10.1007/s10916-017-0863-8 ISSN 0148-5598 .

Al-Yazeedi, Talal, Xu, Emily L., Kaur, Jasmin, Shakes, Diane and Pires da Silva, André (2022) Lagging X chromatids specify the orientation of asymmetric organelle partitioning in XX spermatocytes of Auanema rhodensis. Genetics, 222 (4). iyac159. doi:10.1093/genetics/iyac159 ISSN 0016-6731.

Alam, Mohammad Tauqee, Takano, Eriko and Breitling, Rainer (2011) Prioritizing orphan proteins for further study using phylogenomics and gene expression profiles in Streptomyces coelicolor. BMC Research Notes, 4 . p. 325. doi:10.1186/1756-0500-4-325 ISSN 1756-0500.

Alberti, Fabrizio and Corre, Christophe (2019) Editing streptomycete genomes in the CRISPR/Cas9 age. Natural Product Reports, 36 (9). pp. 1237-1248. doi:10.1039/c8np00081f ISSN 0265-0568.

Albornoz, Felipe E., Hayes, Patrick E., Orchard, Suzanne, Clode, Peta L., Nazeri, Nazanin, Standish, Rachel J., Dickie, Ian A., Bending, G. D., Hilton, Sally and Ryan, Megan H. (2020) First cryo-scanning electron microscopy images and X-ray microanalyses of mucoromycotinian fine root endophytes in vascular plants. Frontiers in Microbiology, 11 . 2018. doi:10.3389/fmicb.2020.02018 ISSN 1664-302X.

Alguel, Yilmaz, Amillis, Sotiris, Leung, James, Lambrinidis, George, Capaldi, Stefano, Scull, Nicola J., Craven, Gregory, Iwata, So, Armstrong, Alan, Mikros, Emmanuel, Diallinas, George, Cameron, Alexander and Byrne, Bernadette (2016) Structure of eukaryotic purine/H+ symporter UapA suggests a role for homodimerization in transport activity. Nature Communications, 7 . pp. 1-9. 11336. doi:10.1038/ncomms11336 ISSN 2041-1723.

Alic, Nazif, Andrews, T. Daniel, Giannakou, Maria E., Papatheodorou, Irene, Slack, Cathy, Hoddinott, Matthew P., Cochemé, Helena M., Schuster, Eugene F., Thornton, Janet M. and Partridge, Linda (2011) Genome‐wide dFOXO targets and topology of the transcriptomic response to stress and insulin signalling. Molecular Systems Biology, 7 (1). 502. doi:10.1038/msb.2011.36 ISSN 1744-4292.

Alic, Nazif, Tullet, Jennifer M., Niccoli, Teresa, Broughton, Susan, Hoddinott, Matthew P., Slack, Cathy, Gems, David and Partridge, Linda (2014) Cell-nonautonomous effects of dFOXO/DAF-16 in aging. Cell Reports, 6 (4). pp. 608-616. doi:10.1016/j.celrep.2014.01.015 ISSN 2211-1247.

Allaby, Robin G., Stevens, Chris J. and Fuller, Dorian Q. (2022) A novel cost framework reveals evidence for competitive selection in the evolution of complex traits during plant domestication. Journal of Theoretical Biology, 537 . 111004. doi:10.1016/j.jtbi.2022.111004 ISSN 0022-5193.

Andrianandrasana, Herizo T., Savage, Jessica, Volahy, Anselme Toto, Long, Peter R. and Jones, Nikoleta (2022) Participatory Ecological Monitoring (PEM) : participatory research methods for sustainability ‐ toolkit #4. GAIA - Ecological Perspectives for Science and Society, 31 (4). pp. 231-233. doi:10.14512/gaia.31.4.7 ISSN 0940-5550.

(2020) FKBPL-based peptide, ALM201, targets angiogenesis and cancer stem cells in ovarian cancer. British Journal of Cancer, 122 . pp. 361-371. doi:10.1038/s41416-019-0649-5 ISSN 0007-0920.

Appanah, Rowin, Lones, E. C., Aiello, U., Libri, D. and De Piccoli, Giacomo (2020) Sen1 is recruited to replication forks via Ctf4 and Mrc1 and promotes genome stability. Cell Reports, 30 (7). P2094-2105.E9. doi:10.1016/j.celrep.2020.01.087 ISSN 2211-1247.

Armitage, Andrew D., Cockerton, Helen M., Sreenivasaprasad, Surapareddy, Woodhall, James, Lane, Charles R., Harrison, Richard J. and Clarkson, John P. (2020) Genomics evolutionary history and diagnostics of the Alternaria alternata Species group including apple and Asian pear pathotypes. Frontiers in Microbiology, 10 . 3124. doi:10.3389/fmicb.2019.03124 ISSN 1664-302X.

Armond, Jonathan W., Harry, Edward, McAinsh, Andrew D. and Burroughs, Nigel John (2015) Inferring the forces controlling metaphase kinetochore oscillations by reverse engineering system dynamics. PLoS Computational Biology, 11 (11). e1004607. doi:10.1371/journal.pcbi.1004607 ISSN 1553-7358.

Arrieta, Jorge, Polin, Marco, Saleta-Piersanti, Ramon and Tuval, Idan (2019) Light control of localized photobioconvection. Physical Review Letters, 123 (15). 158101. doi:10.1103/PhysRevLett.123.158101 ISSN 0031-9007.

Arumugam, Prakash (2010) Homolog pairing during meiosis : dyneins on the move. Cell Cycle, Vol.9 (No.11). pp. 2059-2062. doi:10.4161/cc.9.11.11856 ISSN 1538-4101.

Ateweberhan, Mebrahtu, McClanahan, T. R., Graham, N. A. J. and Sheppard, Charles (Charles R. C.) (2011) Episodic heterogeneous decline and recovery of coral cover in the Indian Ocean. Coral Reefs, Vol.30 (No.3). pp. 739-752. doi:10.1007/s00338-011-0775-x ISSN 0722-4028.

Atkins, Christophe J., Seow, David, Burns, Gerard, Town, James, Hand, Rachel A., Lester, Daniel, Cameron, Neil R., Haddleton, David M. and Eissa, Ahmed M. (2020) Branched macromonomers from catalytic chain transfer polymerisation (CCTP) as precursors for emulsion-templated porous polymers. Polymer Chemistry, 11 (23). pp. 3841-3848. doi:10.1039/d0py00539h ISSN 1759-9954.

Atkins, Madison, Týč, Jiří, Shafiq, Shahaan, Ahmed, Manu, Bertiaux, Eloïse, De Castro Neto, Artur Leonel, Sunter, Jack, Bastin, Philippe, Dean, Samuel and Vaughan, Sue (2020) CEP164C regulates flagellum length in stable flagella. Journal of Cell Biology, 220 (1). e202001160. doi:10.1083/jcb.202001160 ISSN 0021-9525.

Auckland, Philip, Clarke, Nicholas I., Royle, Stephen J. and McAinsh, Andrew D. (2017) Congressing kinetochores progressively load Ska complexes to prevent force-dependent detachment. The Journal of Cell Biology, 216 (6). pp. 1623-1639. doi:10.1083/jcb.201607096 ISSN 0021-9525.

Auckland, Philip and McAinsh, Andrew D. (2015) Building an integrated model of chromosome congression. Journal of Cell Science, 128 (18). pp. 3363-3374. doi:10.1242/jcs.169367 ISSN 0021-9533.

Auckland, Philip, Roscioli, Emanuele, Coker, H. L. E. and McAinsh, Andrew D. (2020) CENP-F stabilizes kinetochore-microtubule attachments and limits dynein stripping of corona cargoes. Journal of Cell Biology, 219 (5). e201905018. doi:10.1083/jcb.201905018 ISSN 0021-9525.

Avalos-Pacheco, Alejandra, Rossell, David and Savage, Richard S. (2022) Heterogeneous large datasets integration using bayesian factor regression. Bayesian Analysis, 17 (1). pp. 33-66. doi:10.1214/20-BA1240 ISSN 1931-6690.

Awan, Ruqayya, Benes, Ksenija, Azam, Ayesha, Song, Tzu‐Hsi, Shaban, Muhammad, Verrill, Clare, Tsang, Yee Wah, Snead, David, Minhas, Fayyaz ul Amir Afsar and Rajpoot, Nasir M. (2021) Deep learning based digital cell profiles for risk stratification of urine cytology images. Cytometry Part A, 99 (7). pp. 732-742. doi:10.1002/cyto.a.24313 ISSN 1552-4922.

Back, Oliver, Asally, Munehiro, Wang, Zuowei and Hayashi, Yoshikatsu (2023) Electrotaxis behavior of droplets composed of aqueous Belousov-Zhabotinsky solutions suspended in oil phase. Scientific Reports, 13 (1). 1340. doi:10.1038/s41598-023-27639-8 ISSN 2045-2322.

Badham, Stephen P., Poirier, M., Gandhi, N., Hadjivassiliou, A. and Maylor, Elizabeth A. (2016) Aging and memory as discrimination : influences of encoding specificity, cue overload, and prior knowledge. Psychology and Aging, 31 (7). pp. 758-770. doi:10.1037/pag0000126 ISSN 0882-7974.

Bailey, Trisha L., Hernandez-Fernaud, Juan Ramon and Gibson, Matthew I. (2021) Proline pre-conditioning of cell monolayers increases post-thaw recovery and viability by distinct mechanisms to other osmolytes. RSC Medicinal Chemistry, 12 (6). pp. 982-993. doi:10.1039/D1MD00078K ISSN 2632-8682.

Bailey, Trisha L., Stubbs, Christopher D., Murray, Kathryn, Tomás, Ruben M. F., Otten, Lucienne and Gibson, Matthew I. (2019) Synthetically scalable poly(ampholyte) which dramatically enhances cellular cryopreservation. Biomacromolecules, 20 (8). pp. 3104-3114. doi:10.1021/acs.biomac.9b00681 ISSN 1525-7797.

Baklanov, Aleksandr, Küchle, Johannes T., Duncan, David A., Ryan, Paul T. P., Maurer, Reinhard J., Schwarz, Martin, Rascon, Eduardo Corral, Piquero-Zulaica, Ignacio, Ngo, Huynh Thien, Riss, Alexander, Allegretti, Francesco and Auwärter, Willi (2023) Zinc-porphine on coinage metal surfaces : adsorption configuration and ligand-induced central atom displacement. The Journal of Physical Chemistry C, 127 (15). pp. 7501-7512. doi:10.1021/acs.jpcc.3c00232 ISSN 1932-7447.

Bancroft, James M., Auckland, Philip, Samora, C. P. and McAinsh, Andrew D. (2015) Chromosome congression is promoted by CENP-Q- and CENP-E-dependent pathways. Journal of Cell Science, 128 (1). pp. 171-184. doi:10.1242/jcs.163659 ISSN 0021-9533.

Bandi, Bharath, Santillana, Begona, Tiekink, Wouter, Koura, Nadia, Williams, Mark A. and Srirangam, Prakash (2020) 2D automated SEM and 3D X-ray computed tomography study on inclusion analysis of steels. Ironmaking & Steelmaking, 47 (1). pp. 47-50. doi:10.1080/03019233.2019.1652437 ISSN 0301-9233.

Baniukiewicz, Piotr, Lutton, E. Josiah, Collier, Sharon and Bretschneider, Till (2019) Generative adversarial networks for augmenting training data of microscopic cell images. Frontiers in Computer Science, 1 . 10. doi:10.3389/fcomp.2019.00010 ISSN 2624-9898.

Barneda, David, Planas-Iglesias, Joan, Gaspar, Maria L., Mohammadyani, Dariush, Prasannan, Sunil, Dormann, Dirk, Han, Gil-Soo, Jesch, Stephen A., Carman, George M., Kagan, Valerian, Parker, Malcolm G., Ktistakis, Nicholas T., Klein-Seetharaman, Judith, Dixon, Ann M., Henry, Susan A. and Christian, Mark (2015) The brown adipocyte protein CIDEA promotes lipid droplet fusion via a phosphatidic acid-binding amphipathic helix. eLife, 4 . doi:10.7554/eLife.07485 ISSN 2050-084X.

(2023) Properties of non-coding mutation hotspots as urinary biomarkers for bladder cancer detection. Scientific Reports, 13 (1). 1060. doi:10.1038/s41598-023-27675-4 ISSN 2045-2322.

Baxter, Laura, Roy, Proyash, Picot, Emma, Watts, Jess, Jones, Alexandra M., Wilkinson, Helen, Schäfer, Patrick, Gifford, Miriam L. and Lagunas, Beatriz (2021) Comparative genomics across three ensifer species using a new complete genome sequence of the Medicago symbiont Sinorhizobium (Ensifer) meliloti WSM1022. Microorganisms, 9 (12). 2428. doi:10.3390/microorganisms9122428 ISSN 2076-2607.

Beal, Robert, Alonso-Carriazo, Fernandez, Grammatopoulos, Dimitris, Matter, Karl and Balda, Maria S. (2021) ARHGEF18/p114RhoGEF coordinates PKA/CREB signalling and actomyosin remodelling to promote trophoblast cell-cell fusion during placenta morphogenesis. Frontiers in Cell and Developmental Biology, 9 . 658006. doi:10.3389/fcell.2021.658006 ISSN 2296-634X.

Beale, Rachael, Polimene, Luca, Chen, Yin, Mausz, Michaela A., Scanlan, David J. , Widdicombe, Claire, Tarran, Glen, Woodward, Malcolm, Harris, Carolyn, McEvoy, Andrea and Airs, Ruth L. (2023) Seasonal measurements of the nitrogenous osmolyte glycine betaine in marine temperate coastal waters. Biogeochemistry, 162 . pp. 309-323. doi:10.1007/s10533-022-01006-7 ISSN 0168-2563.

Beamer, Edward, O'Dea, Mary Isabel, Garvey, Aisling A., Smith, Jonathon, Menéndez-Méndez, Aida, Kelly, Lynne, Pavel, Andreea, Quinlan, Sean, Alves, Mariana, Jimenez-Mateos, Eva M., Tian, Faming, Dempsey, Eugene, Dale, Nicholas, Murray, Deirdre M., Boylan, Geraldine B., Molloy, Eleanor J. and Engel, Tobias (2021) Novel point-of-care diagnostic method for neonatal encephalopathy using purine nucleosides. Frontiers in Molecular Neuroscience, 14 . 732199. doi:10.3389/fnmol.2021.732199 ISSN 1662-5099.

Benarroch, Jonatan M. and Asally, Munehiro (2020) The microbiologist’s guide to membrane potential dynamics. Trends in Microbiology, 28 (4). pp. 304-314. doi:10.1016/j.tim.2019.12.008 ISSN 0966-842X.

Bentley, Cameron Luke, Kang, Minkyung, Bukola, Saheed, Creager, Stephen E. and Unwin, Patrick R. (2022) High-resolution ion-flux imaging of proton transport through graphene|nafion membranes. ACS Nano, 16 (4). pp. 5233-5245. doi:10.1021/acsnano.1c05872 ISSN 1936-086X.

Bentley, Cameron Luke, Kang, Minkyung and Unwin, Patrick R. (2017) Scanning electrochemical cell microscopy : new perspectives on electrode processes in action. Current Opinion in Electrochemistry, 6 (1). pp. 23-30. doi:10.1016/j.coelec.2017.06.011 ISSN 2451-9103.

Bentley, Cameron Luke and Unwin, Patrick R. (2018) Nanoscale electrochemical movies and synchronous topographical mapping of electrocatalytic materials. Faraday Discussions, 210 . 365-379 . doi:10.1039/c8fd00028j ISSN 0301-7249.

Benton, Matthew Alan, Frey, Nadine, Nunes da Fonseca, Rodrigo , von Levetzow, Cornelia, Stappert, Dominik, Hakeemi, Muhammad Salim, Conrads, Kai H., Pechmann, Matthias, Panfilio, Kristen A., Lynch, Jeremy A. and Roth, Siegfried (2019) Fog signaling has diverse roles in epithelial morphogenesis in insects. eLife, 8 . e47346. doi:10.7554/elife.47346 ISSN 2050-084X.

Berg, Hugo van den (2018) Darwin endures, despite disparagement. Science Progress, 101 (1). pp. 32-51. doi:10.3184/003685018X15166188312386 ISSN 0036-8504.

Berg, Hugo van den (2017) Inceptions of biomathematics from Lotka to Thom. Science Progress, 10 (1). pp. 45-62. ISSN 0036-8504.

Bi, Dadi, Almpanis, Apostolos, Noel, Adam, Deng, Yansha and Schober, Robert (2021) A survey of molecular communication in cell biology : establishing a new hierarchy for interdisciplinary applications. IEEE Communications Surveys & Tutorials, 23 (3). pp. 1494-1545. doi:10.1109/COMST.2021.3066117 ISSN 1553-877X.

Biggs, Caroline I., Bailey, Trisha L., Graham, Ben, Stubbs, Christopher D., Fayter, Alice and Gibson, Matthew I. (2017) Polymer mimics of biomacromolecular antifreezes. Nature Communications, 8 . 1546. doi:10.1038/s41467-017-01421-7 ISSN 2041-1723.

Bisketzi, Evangelia, Branford, Dominic and Datta, Animesh (2019) Quantum limits of localisation microscopy. New Journal of Physics, 21 (12). 123032. doi:10.1088/1367-2630/ab58a0 ISSN 1367-2630.

Bissoyi, Akalabya, Tomás, Ruben M. F., Gao, Yanan, Guo, Qiongyu and Gibson, Matthew I. (2023) Cryopreservation of liver-cell spheroids with macromolecular cryoprotectants. ACS Applied Materials & Interfaces, 15 (2). pp. 2630-2638. doi:10.1021/acsami.2c18288 ISSN 1944-8244.

Blowey, Phil J., Haags, A., Rochford, L. A., Felter, J., Warr, Daniel, Duncan, D. A., Lee, T. -L., Costantini, G., Kumpf, C. and Woodruff, D. P. (2019) Characterisation of growth & structure of TCNQ phases on Ag(111). Physical Review Materials, 3 . 116001. doi:10.1103/PhysRevMaterials.3.116001 ISSN 2475-9953.

Boachie, Joseph, Adaikalakoteswari, Antonysunil, Goljan, Ilona, Samavat, Jinous, Cagampang, Felino R. and Saravanan, Ponnusamy (2021) Intracellular and tissue levels of vitamin B12 in hepatocytes are modulated by CD320 receptor and TCN2 transporter. International Journal of Molecular Sciences, 22 (6). 3089. doi:10.3390/ijms22063089 ISSN 1422-0067.

Boardman, Felicity K. and Hale, Rachel (2018) Responsibility and identity and genomic sequencing : a comparison of published recommendations and patient perspectives on accepting or declining incidental findings. Molecular Genetics and Genomic Medicine, 6 (6). pp. 1079-1096. doi:10.1002/mgg3.485 ISSN 2324-9269.

(2023) Inflammasome-independent NLRP3 function enforces ATM activity in response to genotoxic stress. Life Science Alliance, 6 (4). e202201494. doi:10.26508/lsa.202201494 ISSN 2575-1077.

Bolitho, Elizabeth, Sanchez-Cano, Carlos, Shi, Huayun, Quinn, Paul D., Harkiolaki, Maria, Imberti, Cinzia and Sadler, Peter J. (2021) Single-cell chemistry of photoactivatable platinum anticancer complexes. Journal of the American Chemical Society, 143 (48). pp. 20224-20240. doi:10.1021/jacs.1c08630 ISSN 1520-5126.

Bolton, Louise, Reiman, Anne, Lucas, Katie, Timms, Judith and Cree, Ian A. (2015) KRAS mutation analysis by PCR : a comparison of two methods. PLoS One, Volume 10 (Number 1). Article number e0115672. doi:10.1371/journal.pone.0115672 ISSN 1932-6203.

Boltze, Johannes, Abe, Koji, Clarkson, Andrew N., Detante, Olivier, Pimentel-Coelho, Pedro M., Rosado-de-Castro, Paulo H. and Janowski, Miroslaw (2020) Cell-based therapies for stroke : promising solution or dead end? Frontiers in Neurology, 11 . 171. doi:10.3389/fneur.2020.00171 ISSN 1664-2295.

Boltze, Johannes, Didwischus, Nadine, Li, Shengcai, Jolkkonen, Jukka and Taguchi, Akihiko (2020) Increased migratory and homing abilities of neural and mesenchymal stem cell populations by transient cell modifications : preclinical progress and clinical relevanc. EBioMedicine, 60 . 103022. doi:10.1016/j.ebiom.2020.103022 ISSN 2352-3964.

(2019) Stem cells as an emerging paradigm in stroke 4 : advancing and accelerating preclinical research. Stroke, 50 (11). pp. 3299-3306. doi:10.1161/STROKEAHA.119.025436 ISSN 0039-2499.

Boltze, Johannes, Nitzsche, Franziska, Jolkkonen, Jukka, Weise, Gesa, Pösel, Claudia, Nitzsche, Björn and Wagner, Daniel-Christoph (2017) Concise review : increasing the validity of cerebrovascular disease models and experimental methods for translational stem cell research. Stem Cells, 35 (5). pp. 1141-1153. doi:10.1002/stem.2595 ISSN 1066-5099.

Borsetto, Chiara, Raguideau, Sébastien, Travis, Emma Rachel, Kim, Dae-Wi, Lee, Do-Hoon, Bottrill, Andrew R., Stark, Richard Jan, Song, Lijiang, Cha, Chang-Jun, Pearson, Jonathan M., Quince, Christopher, Singer, Andrew C. and Wellington, Elizabeth M. H. (2021) Impact of sulfamethoxazole on a riverine microbiome. Water Research, 201 . 117382. doi:10.1016/j.watres.2021.117382 ISSN 0043-1354.

Bortz, Gaby, Vasen, Federico and Rosemann, Achim (2017) Entre oportunidad y riesgo : regulación, expectativas y políticas CTI para células madre en Argentina. Ciencia, Docencia y Tecnología, 28 (54). pp. 38-74. ISSN 0327-5566.

Bramham, Lawrence E., Wang, Tongtong, Higgins, Erin E., Parkin, Isobel A. P., Barker, Guy C. and Walsh, John A. (2022) Characterization and mapping of retr04, retr05 and retr06 broad-spectrum resistances to Turnip mosaic virus in Brassica juncea, and the development of robust methods for utilizing recalcitrant genotyping data. Frontiers in Plant Science, 12 . doi:10.3389/fpls.2021.787354 ISSN 1664-462X.

Breeze, Emily, Dzimitrowicz, Natasha, Kriechbaumer, Verena, Brooks, Rhiannon, Botchway, Stanley W., Brady, Jacob P., Hawes, Chris, Dixon, Ann M., Schnell, Jason R., Fricker, Mark D. and Frigerio, Lorenzo (2016) A C-terminal amphipathic helix is necessary for the in-vivo tubule-shaping function of plant reticulon. Proceedings of the National Academy of Sciences of the United States of America, 113 (39). pp. 10902-10907. doi:10.1073/pnas.1605434113 ISSN 0027-8424.

Breeze, Emily, Vale, Victoria, McLellan, Hazel, Pecrix, Yann, Godiard, Laurence, Grant, Murray and Frigerio, Lorenzo (2023) A tell tail sign : a conserved C-terminal tail-anchor domain targets a subset of pathogen effectors to the plant endoplasmic reticulum. Journal of Experimental Botany, 74 (10). pp. 3188-3202. doi:10.1093/jxb/erad075 ISSN 1460-2431.

Brooks, Rhiannon L., Mistry, Chandni S. and Dixon, Ann M. (2021) Curvature sensing amphipathic helix in the C-terminus of RTNLB13 is conserved in all endoplasmic reticulum shaping reticulons in Arabidopsis thaliana. Scientific Reports, 11 (1). 6326. doi:10.1038/s41598-021-85866-3 ISSN 2045-2322.

Broomfield, Jonathan, Abrams, Keith R., Freeman, Suzanne, Latimer, Nicholas, Rutherford, Mark J. and Crowther, Michael J. (2023) Modeling the multi‐state natural history of rare diseases with heterogeneous individual patient data : a simulation study. Statistics in Medicine . doi:10.1002/sim.9949 ISSN 1097-0258. (In Press)

Brown, Chelsea M., Corey, Robin A., Grélard, Axelle , Gao, Ya, Kyo Choi, Yeol, Luna, Emanuel, Gilleron, Martine, Destainville, Nicolas, Nigou, Jérôme, Loquet, Antoine, Fullam, Elizabeth, Im, Wonpil, Stansfeld, Phillip J. and Chavent, Matthieu (2023) Supramolecular organisation and dynamics of mannosylated phosphatidylinositol lipids in the mycobacterial plasma membrane. Proceedings of the National Academy of Sciences of the United States of America, 120 (5). e2212755120. doi:10.1073/pnas.2212755120 ISSN 0027-8424.

Brumley, Douglas R., Bruot, Nicolas, Kotar, Jurij, Goldstein, Raymond E., Cicuta, Pietro and Polin, Marco (2016) Long-range interactions, wobbles, and phase defects in chains of model cilia. Physical Review Fluids, 1 (8). 081201(R). doi:10.1103/PhysRevFluids.1.081201 ISSN 2469-990X.

Brödel, Andreas K., Isalan, Mark and Jaramillo, Alfonso (2018) Engineering of biomolecules by bacteriophage directed evolution. Current Opinion in Biotechnology, 51 . pp. 32-38. doi:10.1016/j.copbio.2017.11.004 ISSN 0958-1669.

Buchsteiner, P., Harmsen, L., Ciomaga Hatnean, Monica, Balakrishnan, Geetha and Wenderoth, M. (2020) Surface analysis of the PrB6 (001) cleavage plane by scanning tunneling microscopy and spectroscopy. Physical Review B, 102 (20). 205403. doi:10.1103/PhysRevB.102.205403 ISSN 2469-9950.

Buchsteiner, P., Sohn, F., Horstmann, J. G., Voigt, J., Ciomaga Hatnean, Monica, Balakrishnan, Geetha, Ropers, C., Blöchl, P. E. and Wenderoth, M. (2019) Surface resonance of the (2×1) reconstructed lanthanum hexaboride (001)-cleavage plane : a combined STM and DFT study. Physical Review B, 100 (20). 205407. doi:10.1103/PhysRevB.100.205407 ISSN 2469-9950.

Buhagiar, Kurt, Templeton, Georgia, Blyth, Henrietta, Dey, Mrinalini and Giacco, Domenico (2020) Mortality risk from long-term treatment with antipsychotic polypharmacy vs monotherapy among adults with serious mental illness : a systematic review and meta-analysis of observational studies. Schizophrenia Research, 223 . pp. 18-28. doi:10.1016/j.schres.2020.08.026 ISSN 0920-9964.

Burroughs, Nigel John, Harry, Edward and McAinsh, Andrew D. (2015) Super-resolution kinetochore tracking reveals the mechanisms of human sister kinetochore directional switching. eLife, 4 . e09500. doi:10.7554/eLife.09500 ISSN 2050-084X.

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Wu, Jianhua, Sinfield, James Lister, Buchanan-Wollaston, Vicky and Feng, Jianfeng (2009) Impact of environmental inputs on reverse-engineering approach to network structures. BMC Systems Biology, Vol.3 . Article 113. doi:10.1186/1752-0509-3-113 ISSN 1752-0509.

Xie, Bin-Bin, Rong, Jin-Cheng, Tang, Bai-Lu, Wang, Sishuo, Liu, Guiming, Qin, Qi-Long, Zhang, Xi-Ying, Zhang, Weipeng, She, Qunxin, Chen, Yin, Li, Fuchuan, Li, Shengying, Chen, Xiu-Lan, Luo, Haiwei, Zhang, Yu-zhong and Cooper, Vaughn S. (2021) Evolutionary trajectory of the replication mode of bacterial replicons. mBio, 12 (1). e02745-20. doi:10.1128/mBio.02745-20 ISSN 2150-7511.

Xu, Dandan, Kong, Tingting, Zhang, Shengnan, Cheng, Baohua, Chen, Jing and Wang, Chunmei (2021) Orexin-A protects against cerebral ischemia-reperfusion injury by inhibiting excessive autophagy through OX1R-mediated MAPK/ERK/mTOR pathway. Cellular Signalling, 79 . 109839. doi:10.1016/j.cellsig.2020.109839 ISSN 0898-6568.

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Xu, Hao, Lantzouni, Ourania, Bruggink, Tonko, Benjamins, Rene, Lanfermeijer, Frank, Denby, Katherine J., Schwechheimer, Claus and Bassel, George (2020) A molecular signal integration network underpinning Arabidopsis seed germination. Current Biology, 30 (19). pp. 3703-3712. doi:10.1016/j.cub.2020.07.012 ISSN 0960-9822.

Yamamoto, Eiji, Domański,, Jan, Naughton, Fiona B., Best , Robert B., Kalli, Antreas C., Stansfeld, Phillip J. and Sansom, Mark S. P. (2020) Multiple lipid binding sites determine the affinity of PH domains for phosphoinositide-containing membranes. Science Advances, 6 (8). eaay5736. doi:10.1126/sciadv.aay5736 ISSN 2375-2548.

(2021) The relative and attributable risks of cardia and non-cardia gastric cancer associated with Helicobacter pylori infection in China : a case-cohort study. The Lancet Public Health, 6 (12). e888-e896. doi:10.1016/S2468-2667(21)00164-X ISSN 2468-2667.

Yang, Yiying, Chen, Haoxiang, Corey, Robin A., Morales, Violette, Quentin, Yves, Froment, Carine, Caumont-Sarcos, Anne, Albenne, Cécile, Burlet-Schiltz, Odile, Ranava, David, Stansfeld, Phillip J., Marcoux, Julien and Ieva, Raffaele (2023) LptM promotes oxidative maturation of the lipopolysaccharide translocon by substrate binding mimicry. Nature Communications, 14 (1). 6368. doi:10.1038/s41467-023-42007-w ISSN 2041-1723.

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Yihe, Lu and Timofeeva, Yulia (2016) Response functions for electrically coupled neuronal network : a method of local point matching and its applications. Biological Cybernetics, 110 (2-3). pp. 117-133. doi:10.1007/s00422-016-0681-y ISSN 0340-1200.

Yin, Haiyan, Zhang, Hui, Kong, Youhua, Wang, Chunmei, Guo, Yan, Gao, Yang, Yuan, Lili, Yang, Xinxin and Chen, Jing (2020) Apelin protects auditory cells from cisplatin-induced toxicity in vitro by inhibiting ROS and apoptosis. Neuroscience Letters, 728 . 134948. doi:10.1016/j.neulet.2020.134948 ISSN 0304-3940.

York, Anna, Lloyd, Adrian J., del Genio, Charo I., Shearer, Jonathan, Hinxman, Karen, Fritz, Konstantin, Fülöp, Vilmos, Dowson, Christopher G., Khalid, Syma and Roper, David I. (2021) Structure-based modeling and dynamics of MurM, a Streptococcus pneumoniae penicillin resistance determinant present at the cytoplasmic membrane. Structure, 29 (7). pp. 731-742. doi:10.1016/j.str.2021.03.001 ISSN 0969-2126.

Yu, Li, Yoshimi, Yoshihisa, Cresswell, Rosalie, Wightman, Raymond, Lyczakowski, Jan J., Wilson, Louis F. L., Ishida, Konan, Stott, Katherine, Yu, Xiaolan, Charalambous, Stephan, Wurman-Rodrich, Joel, Terrett, Oliver M., Brown, Steven P., Dupree, Ray, Temple, Henry, Krogh, Kristian B. R. M. and Dupree, Paul (2022) Eudicot primary cell wall glucomannan is related in synthesis, structure and function to xyloglucan. The Plant Cell, 34 (11). pp. 4600-4622. doi:10.1093/plcell/koac238 ISSN 1532-298X.

Yu, Zhuonan, Smith, Matthew J., Siow, Richard C. M. and Liu, Kuo-Kang (2021) Ageing modulates human dermal fibroblast contractility : quantification using nano-biomechanical testing. Biochimica et Biophysica Acta (BBA) - Molecular Cell Research, 1868 (5). 118972. doi:10.1016/j.bbamcr.2021.118972 ISSN 0167-4889.

Yule, Lewis C., Daviddi, Enrico, West, Geoffrey D., Bentley, Cameron Luke and Unwin, Patrick R. (2020) Surface microstructural controls on electrochemical hydrogen absorption at polycrystalline palladium. Journal of Electroanalytical Chemistry, 872 . 114047. doi:10.1016/j.jelechem.2020.114047 ISSN 1572-6657.

Yule, Lewis C., Shkirskiy, Viacheslav, Aarons, Jolyon, West, Geoffrey D., Bentley, Cameron Luke, Shollock, Barbara A. and Unwin, Patrick R. (2019) Nanoscale active sites for the hydrogen evolution reaction on low carbon steel. The Journal of Physical Chemistry C, 123 (9). pp. 24146-24155. doi:10.1021/acs.jpcc.9b07216 ISSN 1932-7447.

Yule, Lewis C., Shkirskiy, Viacheslav, Aarons, Jolyon, West, Geoffrey D., Shollock, Barbara A., Bentley, Cameron Luke and Unwin, Patrick R. (2020) Nanoscale electrochemical visualization of grain-dependent anodic iron dissolution from low carbon steel. Electrochimica Acta, 332 . 135267. doi:10.1016/j.electacta.2019.135267 ISSN 0013-4686.

Zadjelovic, Vinko, Wright, Robyn J., Borsetto, Chiara, Quartey, Jeannelle, Cairns, Tyler N., Langille, Morgan G. I., Wellington, Elizabeth M. H. and Christie-Oleza, Joseph Alexander (2023) Microbial hitchhikers harbouring antimicrobial-resistance genes in the riverine plastisphere. Microbiome, 11 (1). 225. doi:10.1186/s40168-023-01662-3 ISSN 2049-2618.

Zambon, Paola, Palani, S., Kamnev, Anton and Balasubramanian, Mohan K. (2017) Myo2p is the major motor involved in actomyosin ring contraction in fission yeast. Current Biology, 27 (3). R99-R100. doi:10.1016/j.cub.2016.12.024 ISSN 0960-9822.

Zan, Ke, Wang, Jinwei, Ren, Fei, Yu, Jinglin, Wang, Shuo, Xie, Fengwei and Wang, Shujun (2021) Structural disorganization of cereal, tuber and bean starches in aqueous ionic liquid at room temperature : role of starch granule surface structure. Carbohydrate Polymers, 258 . 117677. doi:10.1016/j.carbpol.2021.117677 ISSN 0144-8617.

Zerfaß, Christian, Asally, Munehiro and Soyer, Orkun S. (2019) Interrogating metabolism as an electron flow system. Current Opinion in Systems Biology, 13 . pp. 59-67. doi:10.1016/j.coisb.2018.10.001 ISSN 2452-3100.

Zhang, Guohui, Guell, Aleix G., Kirkman, Paul M., Lazenby, Robert A., Miller, Thomas S. and Unwin, Patrick R. (2016) Versatile polymer-free graphene transfer method and applications. ACS Applied Materials & Interfaces, 8 (12). pp. 8008-8016. doi:10.1021/acsami.6b00681 ISSN 1944-8244.

Zhang, Qiang, Collins, Jennifer, Anastasaki, Athina, Wallis, Russell, Mitchell, Daniel A., Becer, C. Remzi and Haddleton, David M. (2013) Sequence-controlled multi-block glycopolymers to inhibit DC-SIGN-gp120 binding. Angewandte Chemie International Edition, 52 (16). pp. 4435-4439. doi:10.1002/anie.201300068 ISSN 1433-7851.

Zhang, Xian, Kang, Lihua, Zhang, Qi, Meng, Qiqi, Pan, Yafei, Yu, Zhiming, Shi, Nongnong, Jackson, Stephen D. , Zhang, Xinlian, Wang, Huizhong, Tör, Mahmut and Hong, Yiguo (2020) An RNAi suppressor activates in planta virus-mediated gene editing. Functional & Integrative Genomics, 20 . pp. 471-477. doi:10.1007/s10142-019-00730-y ISSN 1438-793X.

Zhang, Xiwen, Mao, Feng, Gong, Zhaoya, Hannah, David M., Cai, Yunnan and Wu, Jiansheng (2023) A disaster-damage-based framework for assessing urban resilience to intense rainfall-induced flooding. Urban Climate, 48 . 101402. doi:10.1016/j.uclim.2022.101402 ISSN 22120955.

Zhao, Shuo, Li, Zushu, Xu, Renze, Khasraw, Darbaz, Song, Gaoyang and Xu, Dong (2021) Dissolution behavior of different inclusions in high Al steel reacted with refining slags. Metals, 11 (11). 1801. doi:10.3390/met11111801 ISSN 2075-4701.

Zhou, Zhemin, Alikhan, Nabil-Fareed, Sergeant, Martin J., Luhmann, Nina, Vaz, Cátia, Francisco, Alexandre P. , Carriço, João André and Achtman, Mark (2018) GrapeTree : visualization of core genomic relationships among 100,000 bacterial pathogens. Genome Research, 28 (10). pp. 1395-1404. doi:10.1101/gr.232397.117 ISSN 1088-9051.

Zhu, Yizhu, Purdy, Kevin J., Martínez Rodríguez, Ana and Trimmer, Mark (2023) A rationale for higher ratios of CH4 to CO2 production in warmer anoxic freshwater sediments and soils. Limnology and Oceanography Letters, 8 (3). pp. 398-405. doi:10.1002/lol2.10327 ISSN 2378-2242.

Zimmermann, Nils E. R., Vorselaars, Bart, Quigley, David and Peters, Baron (2015) Nucleation of NaCl from aqueous solution : critical sizes, ion-attachment kinetics, and rates. Journal of the American Chemical Society, 137 (41). pp. 13352-13361. doi:10.1021/jacs.5b08098 ISSN 0002-7863.

Zubkov, Mikhail V. , Martin, Adrian P., Hartmann, Manuela, Grob, Carolina and Scanlan, David J. (2015) Dominant oceanic bacteria secure phosphate using a large extracellular buffer. Nature Communications, 6 . 7878. doi:10.1038/ncomms8878 ISSN 2041-1723.

Zwanenburg, E. A., Williams, M. A. and Warnett, Jason M. (2021) Review of high-speed imaging with lab-based x-ray computed tomography. Measurement Science and Technology, 33 (1). 012003. doi:10.1088/1361-6501/ac354a ISSN 0957-0233.

Zwetsloot, Alexander, Tut, Gokhan and Straube, Anne (2018) Measuring microtubule dynamics. Essays in Biochemistry . EBC20180035. doi:10.1042/EBC20180035 ISSN 0071-1365.

de Souza‐Guerreiro, Tailise Carolina , Meng, Xiang, Dacheux, Estelle, Firczuk, Helena and McCarthy, John E. G. (2021) Translational control of gene expression noise and its relationship to ageing in yeast. The FEBS Journal, 288 (7). pp. 2278-2293. doi:10.1111/febs.15594 ISSN 1742-4658.

de Wolf, Elizabeth, van de Wiel, Joseph, Cook, Jonathan and Dale, Nicholas (2016) Altered CO2 sensitivity of connexin26 mutant hemichannels in vitro. Physiological Reports, 4 (22). e13038. ISSN 2051-817X.

el Manouni el Hassani, Sofia, Bosch, Sofie, Lemmen, Jesse P. M., Brizzio Brentar, Marina, Ayada, Ibrahim, Wicaksono, Alfian, Covington, James A., Benninga, Marc A., de Boer, Nanne K. H. and de Meij, Tim G. J. (2019) Simultaneous assessment of urinary and fecal volatile organic compound analysis in De Novo Pediatric IBD. Sensors, 19 (20). 4496. doi:10.3390/s19204496 ISSN 1424-8220.

von Loeffelholz, Ottilie, Peña, Alejandro, Drummond, Douglas R., Cross, R. A. and Moores, Carolyn Ann (2019) Cryo-EM structure (4.5-Å) of yeast Kinesin-5–microtubule complex reveals a distinct binding footprint and mechanism of drug resistance. Journal of Molecular Biology, 431 (4). pp. 864-872. doi:10.1016/j.jmb.2019.01.011 ISSN 0022-2836.

von Loeffelholz, Ottilie, Venables, Neil A., Drummond, Douglas R., Katsuki, Miho, Cross, R. A. and Moores, Carolyn A. (2017) Nucleotide– and Mal3-dependent changes in fission yeast microtubules suggest a structural plasticity view of dynamics. Nature Communications, 8 (1). 2110. doi:10.1038/s41467-017-02241-5 ISSN 2041-1723.

Čapek, Daniel, Smutny, Michael, Tichy, Alexandra-Madelaine, Morri, Maurizio, Janovjak, Harald and Heisenberg, Carl-Philipp (2019) Light-activated Frizzled7 reveals a permissive role of non-canonical wnt signaling in mesendoderm cell migration. eLife, 8 . e42093. doi:10.7554/elife.42093 ISSN 2050-084X.

Book Item

Cai, Kunhai, He, Xianbin, Tian, Yanling, Liu, Xianping and Cui, Liangyu (2018) Development and testing of a XYZ scanner for atomic force microscope. In: Eskola, Hannu and Väisänen, Outi and Viik, Jari and Hyttinen, Jari, (eds.) EMBEC & NBC 2017. IFMBE Proceedings, 65 . Singapore: Springer, pp. 326-329. ISBN 9789811051210

Hultén, Maj A., Smith, Edward M. and Delhanty, Joy D. A. (2010) Errors in chromosome segregation during oogenesis and early embryogenesis. In: Reproductive Endocrinology and Infertility. Springer: Springer Science and Business Media, pp. 325-342. ISBN 9781441914354

Jacomin, Anne-Claire and Nezis, Ioannis P. (2017) Assays to monitor aggrephagy in Drosophila brain. In: Turksen, K., (ed.) Autophagy in Differentiation and Tissue Maintenance. Methods in Molecular Biology, 1854 . New York, NY: Humana Press, pp. 147-157. ISBN 9781493987474

Köster, Darius Vasco (2020) Pulling of tethers from the cell plasma membrane using optical tweezers. In: Blouin, C., (ed.) Caveolae. Methods in Molecular Biology, 2169 . Humana, New York, NY: Springer, pp. 167-174. ISBN 9781071607312

Lassalle, Florent and Didelot, Xavier (2020) Bacterial microevolution and the Pangenome. In: Tettelin, H. and Medini, D., (eds.) The Pangenome. Cham: Springer, pp. 129-149. ISBN 9783030382803

Muratori, Cecilia (2019) Science or “sad trash”? Aristotelian lineages in the historiography of animal magnetism. In: König-Pralong, C. and Meliadò, M. and Radeva, Z., (eds.) The Territories of Philosophy in Modern Historiography. Ad argumenta Ebook (Quaestio Special Issue) (1). Turnhout: Brepols, pp. 203-222. ISBN 9782503584683

Sudarshan, Anant (2022) Monitoring industrial pollution in India. In: Madon, T. and Gadgil, A. J. and Anderson, R. and Casaburi, L. and Lee, K. and Rezaee, A., (eds.) Introduction to Development Engineering. Cham, Switzerland: Springer, pp. 161-182. ISBN 9783030860646 (In Press)

Conference Item

Gonzalez, Ricardo Aguilar and Yeboah, Godwin (2022) Foodscapes of bread in sixteenth-century New Spain using a historical gazetteer. In: Spatial Humanities 2022, Ghent, Belgium, 07-09 Sep 2022

Klemmer, Konstantin, Yeboah, Godwin, Porto de Albuquerque, João and Jarvis, Stephen A. (2020) Population mapping in informal settlements with high-resolution satellite imagery and equitable ground-truth. In: ML-IRL Workshop, International Conference on Learning Representations 2020, Addis Ababa, Ethiopia, 26 Apr 2020

Offord, Edward, Lutton, E. Josiah and Bretschneider, Till (2023) Cell membrane feature detection using graph neural networks. In: 20th IEEE International Symposium on Biomedical Imaging, Cartagena de Indias, Colombia, 18-21 Apr 2023. Published in: 2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI) ISBN 9781665473583. doi:10.1109/ISBI53787.2023.10230695 ISSN 1945-8452.

Parashar, D., Bowden, Jack, Starr, Colin, Wernisch, Lorenz and Mander, Adrian (2015) Type I error control in biomarker-stratified clinical trials. In: 3rd International Clinical Trials Methodology Conference, Glasgow SECC, UK, 16-17 Nov 2015. Published in: Trials, 16 (Suppl 2). O84. doi:10.1186/1745-6215-16-S2-O84 ISSN 1745-6215.

Sondag, Max, Turkay, Cagatay, Mohr, Sibylle, Matthews, Louise, Xu, Kai-Wen and Archambault, Daniel (2022) What is R? A graph drawer’s perspective? In: 29th International Symposium on Graph Drawing and Network Visualization, Tübingen, Germany, 14-17 Sep 2021, 12868 (In Press)

Steadman, Liam, Griffiths, Nathan, Jarvis, Stephen A., Bell, M., Helman, S. and Wallbank, C. (2020) Reducing and linking spatio-temporal datasets with kD-STR. In: 3rd ACM SIGSPATIAL International Workshop on Advances in Resilient and Intelligent Cities (ARIC 2020), Seattle, Washington, USA, 3-6 Nov 2020. Published in: ARIC '20: Proceedings of the 3rd ACM SIGSPATIAL International Workshop on Advances in Resilient and Intelligent Cities pp. 10-19. ISBN 9781450381659. doi:10.1145/3423455.3430317

Tiskin, Alexander (2019) Bounded-length Smith-Waterman alignment. In: 19th International Workshop on Algorithms in Bioinformatics (WABI 2019), Niagara Falls, NY, USA, 8-10 Sep 2019, 143 16:1-16:12. ISBN 9783959771238. doi:10.4230/LIPIcs.WABI.2019.16 ISSN 1868-8969.

Yaseen, A., Abbasi, W. and Minhas, Fayyaz ul Amir Afsar (2018) Protein binding affinity prediction using support vector regression and interfecial features. In: 2018 15th International Bhurban Conference on Applied Sciences and Technology (IBCAST), Islamabad, Pakistan, 9-13 Jan 2018. Published in: Proceedings of 2018 15th International Bhurban Conference on Applied Sciences & Technology (IBCAST) : 9th-13th January, 2018 pp. 194-198. ISBN 9781538635643. doi:10.1109/IBCAST.2018.8312222

Working or Discussion Paper

Breeze, Emily, Vale, Victoria, McLellan, Hazel, Godiard, Laurence, Grant, Murray and Frigerio, Lorenzo (2020) The plant endoplasmic reticulum is both receptive and responsive to pathogen effectors. Working Paper. New York: Cold Spring Harbor Laboratory.

Dale, Matthew W. and Morley, Gavin (2017) Medical applications of diamond magnetometry : commercial viability. Discussion Paper. arXiv. (Unpublished)

Ede, Jeffrey M. (2020) Adaptive partial scanning transmission electron microscopy with reinforcement learning. Working Paper. Cornell University: arXiv. (Submitted)

Frank, Eyal G. and Sudarshan, Anant (2022) The social costs of keystone species collapse : evidence from the decline of vultures in India. Working Paper. Coventry, UK: University of Warwick. Department of Economics. Warwick economics research papers series (WERPS) (1433). (Unpublished)

Prangnell, Lee (2016) Visible light-based human visual system conceptual model. Discussion Paper. University of Warwick. Mathematics Institute: Coventry. (Unpublished)

Tandonnet, Sophie, Farrell, Maureen C., Koutsovoulos, Georgios, Blaxter, Mark, Parihar, Manish, Sadler, Penny L., Shakes, Diane and Pires-da Silva, André Francisco (2017) Gender- and gamete-specific patterns of X chromosome segregation in a three-gendered nematode. Working Paper. BioRxiv: Cold Spring Harbour Laboratory. (Unpublished)

Taylor-Joyce, Grace, Manoharan, Shathviga, Brooker, Thomas, Hernandez-Rodrıguez, Carmen Sara, Baillie, Les, Oyston, Petra C. F., Hapeshi, Alexia and Waterfield, Nicholas R. (2022) The influence of extrachromosomal elements in the anthrax “cross-over” strain Bacillus cereus G9241. Working Paper. BioRxiv. (Submitted)

Journal Item

Amer, Mohamed, Hayat, Qamar, Janik, Vit, Jennett , Nigel, Nottingham, Jon and Bai, Mingwen (2022) A review on in situ mechanical testing of coatings. Coatings, 12 (3). 299. doi:10.3390/coatings12030299

Bavaharan, Abhirame and Skilbeck, Christopher (2022) Electrical signalling in prokaryotes and its convergence with quorum sensing in Bacillus. BioEssays, 44 (4). 2100193. doi:10.1002/bies.202100193

Boardman, Felicity K. (2020) Letter to the editor. Gene editing and disabled people : a response to Iñigo de Miguel Beriain. Journal of Community Genetics . doi:10.1007/s12687-020-00465-5

Boltze, Johannes and Jolkkonen, Jukka (2019) Safety evaluation of intra-arterial cell delivery in stroke patients—a framework for future trials. Annals of Translational Medicine, 7 (S8). S271. doi:10.21037/atm.2019.12.07

Breeze, Emily (2019) State of (in)flux : action of a CNGC Ca2+ channel in defense against herbivory. The Plant Cell, 31 (7). pp. 1423-1424. doi:10.1105/tpc.19.00372

Breeze, Emily (2019) To Golgi and beyond! The Plant Cell, 31 (9). pp. 1936-1937. doi:10.1105/tpc.19.00477

Dale, Nicholas (2021) And they're out of the gate…. The Journal of Physiology, 599 (13). pp. 3259-3260. doi:10.1113/JP281784

Hohlbein, Johannes, Diederich, Benedict, Marsikova, Barbora, Reynaud, Emmanuel G., Holden, Séamus, Jahr, Wiebke, Haase, Robert and Prakash, Kirti (2022) Open microscopy in the life sciences : quo vadis? Nature Methods, 19 . pp. 1020-1025. doi:10.1038/s41592-022-01602-3

(2022) Multiomics in the central Arctic Ocean for benchmarking biodiversity change. PLoS Biology, 20 (10). e3001835. doi:10.1371/journal.pbio.3001835

Mendonça, Liliana, Webster, Christopher, Boltze, Johannes and Nóbrega, Clévio (2023) Editorial: Advanced (gene and cell) therapies for central nervous system applications. Frontiers in Molecular Neuroscience, 16 . 1140949. doi:10.3389/fnmol.2023.1140949

Murray, Kathryn A., Gao, Yanan, Griffiths, Christopher A., Kinney, Nina L. H., Guo, Qiongyu, Gibson, Matthew I. and Whale, Thomas F. (2023) Chemically induced extracellular ice nucleation reduces intracellular ice formation enabling 2D and 3D cellular cryopreservation. JACS Au . doi:10.1021/jacsau.3c00056 (In Press)

Pompa, Andrea, De Marchis, Francesca, Pallotta, Maria Teresa, Benitez-Alfonso, Yoselin, Jones, Alexandra M., Schipper, Kerstin, Moreau, Kevin, Žárský, Viktor, Di Sansebastiano, Gian Pietro and Bellucci, Michele (2017) Unconventional transport routes of soluble and membrane proteins and their role in developmental biology. International Journal of Molecular Sciences, 18 (4). 703. doi:10.3390/ijms18040703

Sheppard, Charles (Charles R. C.) (2014) Famines, food insecurity and coral reef 'Ponzi' fisheries. Marine Pollution Bulletin, Volume 84 (Number 1-2). doi:10.1016/j.marpolbul.2014.04.048

Souzy, Mathieu, Allard, Antoine, Louf, Jean-François, Contino, Matteo, Tuval, Idan and Polin, Marco (2022) Microbial narrow-escape is facilitated by wall interactions. Physical Review Research, 4 (2). L022029. doi:10.1103/PhysRevResearch.4.L022029

Thesis

Al Yazeedi, Talal Ali Mohammed (2020) X chromosome as a polarising signal in asymmetric cell division. PhD thesis, University of Warwick.

Al-Lami, Aziz Hamoud Hasan (1977) Studies of mitochondrial transport systems. PhD thesis, University of Warwick.

Armond, Jonathan W. (2010) Forces in a biological context. PhD thesis, University of Warwick.

Aziz, Shakila (1979) A study of RNA synthesis and its control in isolated macronuclei from Tetrahymena. PhD thesis, University of Warwick.

Bailey, Trisha L. (2020) Towards next generation cryopreservation utilising macromolecules and osmolytes. PhD thesis, University of Warwick.

Baker, Michael (2016) The assembly and disassembly of clathrin cages. PhD thesis, University of Warwick.

Baker, Simon Charles (1992) The biogeochemical cycling of sulphur compounds. PhD thesis, University of Warwick.

Bancroft, James M. (2013) Chromosome congression by CENP-E and CENP-Q dependent pathways. PhD thesis, University of Warwick.

Bannaga, Ayman Sharafeldin (2021) Exploration of urine and plasma biomarkers in liver fibrosis and hepatocellular carcinoma. PhD thesis, University of Warwick.

Bano, Anthony M. (2012) Polymorphism in biomineral nanoparticles. PhD thesis, University of Warwick.

Bar, Cantug (2020) Exploring cell-type and single cell specific responses in plants to environmental stimuli. PhD thesis, University of Warwick.

Bauch, Christopher Thomas (2000) Moment closure approximations in epidemiology. PhD thesis, University of Warwick.

Baverstock, Tyler C. (2023) Investigation of the structural regulation of periplasmic amidases during cell division in Escherichia coli. PhD thesis, University of Warwick.

Bertoli, E. (1975) Membrane fluidity and functional organization of the mitochondrial membranes. PhD thesis, University of Warwick.

Bhagat, Shrina (2020) Electrochemical and scanning probe studies of active pharmaceutical ingredient release from polymer-coated multiparticulate oral dosage forms. PhD thesis, University of Warwick.

Bibi, Shakila (2010) Fabrication and use of D-serine biosensors for characterising D-serine signalling in rat brain. PhD thesis, University of Warwick.

Brandt, Jonathan (2020) Investigating the interaction between Marek’s Disease Virus US3 kinase and the host cytoskeleton. PhD thesis, University of Warwick.

Brooks, Jake (2020) Advancing synchrotron spectromicroscopy to investigate metal dysregulation in neurodegenerative disorders. PhD thesis, University of Warwick.

Brooks, Rhiannon (2021) Biophysical investigation of membrane curvature sensing amphipathic helices. PhD thesis, University of Warwick.

Brown, Richard Francis (2016) Investigating the evolutionary origins and cell biology of Negativicutes. PhD thesis, University of Warwick.

Bubb, Gillian (1993) Identification and the characterisation of a novel gene required for the development of the larval head of Drosophila melanogaster. PhD thesis, University of Warwick.

Calderazzo, Silvia (2016) Stochastic modelling of transcriptional regulation with applications to circadian genes. PhD thesis, University of Warwick.

Campbell-Galland, Adam T. (2022) Functional reorganisation of dorsal horn neurones in chronic neuropathic pain : new opportunities for new therapies. PhD thesis, University of Warwick.

Capel, Patrick (2022) Cell-free expression for natural product research. PhD thesis, University of Warwick.

Carter, Charlotte Emily (2014) Assessing the interaction between landscape characteristics and biodiversity. PhD thesis, University of Warwick.

Carver, Mark A. (1979) Studies on lipid involvement in the mechanism of energy coupling. PhD thesis, University of Warwick.

Chen, Baoping (2020) Nanopipette delivery-based multifunctional scanning ion conductance microscopy. PhD thesis, University of Warwick.

Clarke, Scott T. (2022) A study of oscillatory cortical behaviours and traveling waves during cytokinesis in the zebrafish embryo. PhD thesis, University of Warwick.

Clewes, Rachel (2021) Trafficking and intracellular localisation of Arabidopsis thaliana aquaporins. PhD thesis, University of Warwick.

Cowie, Helen Louise (2007) Colonizing science: nature and nations in the Spanish world, c.1750-1850. PhD thesis, University of Warwick.

Cremin, Kelsey Lauren (2022) Analysis of single cell physiology using nano-scale electrochemical methods. PhD thesis, University of Warwick.

Darlison, Mark Geoffrey (1979) Cytoplasmic mutants of yeast : the isolation and genetic characterization of cytoplasmic mutants of Saccharomyces cerevisiae defective in oxidative phosphorylation. PhD thesis, University of Warwick.

Daviddi, Enrico (2020) Developments in scanning electrochemical cell microscopy for applications to multiphase systems. PhD thesis, University of Warwick.

Delise, Marco A. (2020) Development of synthetic biology tools driven by membrane potential. PhD thesis, University of Warwick.

Dickinson, J. Richard (1977) Studies on cyclic nucleotide metabolism in relation to cell cycle control in Tetrahymena pyriformis. PhD thesis, University of Warwick.

Dobrzanska, Dorota A. (2014) Using bio-adhesive and bio-inert surfaces to maximize biogas production and influence microbial growth in anaerobic digesters. PhD thesis, University of Warwick.

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Everett, Rosie (2021) Investigating the preservation of ancient sedimentary DNA (sedaDNA) from three case study wetland environments : towards better understanding of sedaDNA as a tool for palaeoecological reconstruction. PhD thesis, University of Warwick.

Eyriay, Iuliia (2022) Synthesis and analysis of biomolecular circuits using DNA strand displacement. PhD thesis, University of Warwick.

Faulkner, Katy Jane (2023) Climate change impacts on soil microbial community structure and function in temperate forests. PhD thesis, University of Warwick.

Fernandes Duarte, Filipe Alexandre (2021) Investigating chromatin domain structures in living cells using histone pulse-labelling approaches. PhD thesis, University of Warwick.

Foisor, Mihaela Veronica (2022) Development of nanoparticle approaches for correlative imaging and tracking of biological sample. PhD thesis, University of Warwick.

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Georgiou, Panagiotis (2022) New nanomaterial design principles of macromolecular biomimetics. PhD thesis, University of Warwick.

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González, Luis Steven Servín (2021) An interaction between mTOR and Myc in cell size control. PhD thesis, University of Warwick.

Grob, Aurélien Anthony (2021) Structural and functional features of the SLC10 membrane protein transporters. PhD thesis, University of Warwick.

Gruender, Charlotte Rose (2022) Exploring DMSO reduction in model, environmental, and pathogenic microorganisms. PhD thesis, University of Warwick.

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Guerreiro, Tailise Carolina de Souza (2019) Gene expression stochasticity, protein synthesis and the ageing process in the budding yeast Saccharomyces cerevisiae. PhD thesis, University of Warwick.

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Hood, Derek W. (1985) The application of molecular biology techniques to the taxonomy of the pink pigmented facultative methylotrophs. PhD thesis, University of Warwick.

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Kuey, Cansu (2021) Reconstitution of intracellular clathrin-coated vesicle formation. PhD thesis, University of Warwick.

Lakey, Christopher Charles (2020) Inclusions in smectics. PhD thesis, University of Warwick.

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MacDonald, Paul Richard (2018) Directed evolution of bacteriophage T7 receptor tropism. PhD thesis, University of Warwick.

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Sinfield, Oliver Paul (2019) Processing bodies are dynamically localised and associate with multiple organelles throughout the replicative lifespan of the yeast cell. PhD thesis, University of Warwick.

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Zhu, Jiajing (2022) Investigation of mechanical properties of cancerous cells based on atomic force microscope. PhD thesis, University of Warwick.

Zwanenburg, E. A. (2022) Optimising XCT acquisition speed for image quality and dimensional measurements. PhD thesis, University of Warwick.

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Dataset

Achtman, M., Zhou, Zhemin, Charlesworth, Jane and Baxter, Laura (2022) Data for EnteroBase: Hierarchical clustering of 100,000 s of bacterial genomes into species/sub-species and populations. [Dataset]

Bailey, Trisha L., Hernandez-Fernaud, Juan Ramon and Gibson, Matthew I. (2021) Data for Proline pre-conditioning of cell monolayers increases post-thaw recovery and viability by distinct mechanisms to other osmolytes. [Dataset]

Bailey, Trisha L., Stubbs, Christopher, Murray, Kathryn, Tomás, Ruben M. F., Otten, Lucienne and Gibson, Matthew I. (2019) Data for Synthetically scalable poly(ampholyte) which dramatically enhances cellular cryopreservation. [Dataset]

Bissoyi, Akalabya, Tomás, Ruben M. F., Gao, Yanan, Guo, Qiongyu and Gibson, Matthew I. (2023) Dataset to support "Cryopreservation of liver-cell spheroids with macromolecular cryoprotectants". [Dataset]

Chapman, Lloyd A. C. (2017) Data for reproducing figures in Mathematical modelling of cell layer growth in a hollow fibre bioreactor. [Dataset] (Unpublished)

Cobb, Samuel J., Laidlaw, Fraser, West, Geoffrey D., Wood, Georgia F., Newton, Mark E., Beanland, Richard and Macpherson, Julie V. (2020) Data for Assessment of acid and thermal oxidation treatments for removing sp2 bonded carbon from the surface of boron doped diamond. [Dataset]

Corlett, Emily K., Blade, Helen, Hughes, Leslie P., Sidebottom, Philip J., Walker, David, Walton, Richard I. and Brown, Steven P. (2020) Data for 5-amino-2-methylpyridinium hydrogen fumarate : an XRD and NMR crystallography analysis. [Dataset]

Cosseddu, Salvatore M., Choe, Eunju Julia and Khovanov, Igor A. (2021) Data for Unraveling of a strongly correlated dynamical network of residues controlling the permeation of potassium in KcsA Ion Channel. [Dataset]

Edmondson, James, Meloni, Gabriel N., Costantini, Giovanni and Unwin, Patrick R. (2020) Data for Synchronous electrical conductance- and electron tunnelling-scanning electrochemical microscopy measurements. [Dataset]

Fedorenko, Olena A., Khovanov, Igor A., Roberts, Stephen K. and Guardiani, Carlo (2020) Data for Changes in ion selectivity following the asymmetrical addition of charge to the selectivity filter of bacterial sodium channels. [Dataset]

Freedman, R. B., Desmond, Jasmine L., Heal, Jack W., Sanghera, Narinder, Walker, Kelly L., Wallis, A. Katrine, Wells, Stephen A. and Römer, Rudolf A. (2017) Data for 'Something in the way she moves': the functional significance of flexibility in the multiple roles of protein disulfide isomerase (PDI). [Dataset]

Gibson, Matthew I. and Tomás, Ruben M. F. (2019) Data for Optimization and stability of cell–polymer hybrids obtained by “clicking” synthetic polymers to metabolically labeled cell surface glycans. [Dataset]

Gonçalves, Raquel, de Souza, C. F., Rotani, R., Pereira, A., Farnes, K., Gorsich, Erin E., Silva, R., Brazil, R. P., Hamilton, J. G. C. and Courtenay, Orin (2021) Data for Community deployment of a synthetic pheromone of the sand fly Lutzomyia longipalpis co-located with insecticide reduces vector abundance in treated and neighbouring untreated houses : implications for control of Leishmania infantum. [Dataset]

Guardiani, Carlo, Fedorenko, Olena A., Roberts, Stephen K. and Khovanov, I. A. (2017) Data for the selectivity of the NaChBac channel: an integrated computational and experimental analysis of sodium and calcium permeation. [Dataset]

Hassan, Sammy S., Mushinski, Ryan M., Amede, Tilahun, Covington, James and Bending, Gary D. (2023) Data for : Integrated probe system for measuring soil carbon dioxide concentrations. [Dataset]

Laidlaw, Fraser, Diggle, Phil L., Breeze, Ben, Dale, Matthew W., Fisher, D. and Beanland, Richard (2021) Data for Spatial distribution of defects in a plastically deformed natural brown diamond. [Dataset]

Loh, Siow Mean, Xia, Xue, Wilson, Neil R. and Hine, Nicholas (2021) Data for Strong in-plane anisotropy in the electronic properties of doped transition metal dichalcogenides exhibited in W1-xNbxS2. [Dataset]

Mostaed, Ali, Balakrishnan, Geetha, Lees, Martin R., Yasui, Yukio, Chang, Lieh-Jeng and Beanland, R. (2017) Data for Atomic structure study of the pyrochlore Yb2Ti2O7 and its relationship with low-temperature magnetic order. [Dataset]

Murray, Kathryn and Gibson, Matthew I. (2020) Data for Post-thaw culture and measurement of total cell recovery is crucial in the evaluation of new macromolecular cryoprotectants. [Dataset]

Murray, Kathryn, Tomás, Ruben M. F. and Gibson, Matthew I. (2020) Data for Low DMSO cryopreservation of stem cells enabled by macromolecular cryoprotectants. [Dataset]

Peters, Jonathan J. P., Brunier, Alan, Iqbal, Affan, Alexe, Marin and Sánchez, Ana M. (2020) Data for Structural and photoelectric properties of tensile strained BiFeO3. [Dataset]

Rajan, Teena S., Read, Tania L., Abdalla, Aya, Patel, Bhavik A. and Macpherson, Julie V. (2020) Data for Ex vivo electrochemical pH mapping of the gastrointestinal tract in the absence and presence of pharmacological agents. [Dataset]

Shi, Huayun, Imberti, Cinzia, Huang, Huaiyi, Hands-Portman, Ian and Sadler, Peter J. (2020) Data for Biotinylated photoactive Pt(IV) anticancer complexes. [Dataset]

Tomás, Ruben M. F. and Gibson, Matthew I. (2021) Data for Covalent cell surface recruitment of chemotherapeutic polymers enhances selectivity and activity. [Dataset]

Tomás, Ruben M. F., Martyn, Benjamin T., Bailey, Trisha L. and Gibson, Matthew I. (2018) Data for Engineering cell surfaces by covalent grafting of synthetic polymers to metabolically-labeled glycans. [Dataset]

Yule, Lewis C., Daviddi, Enrico, West, Geoffrey D., Bentley, Cameron L. and Unwin, Patrick R. (2020) Data for Surface microstructural controls on electrochemical hydrogen absorption at polycrystalline palladium. [Dataset]

Zhou, Zhemin, Alikhan, Nabil-Fareed, Mohamed, Khaled, Fan, Yulei and Achtman, Mark (2019) Data for The user’s guide to comparative genomics with EnteroBase. [Dataset]