Oakley, Brian B., Carbonero, Franck, Dowd, Scot E, Hawkins, Robert J and Purdy, Kevin J.. (2012) Contrasting patterns of niche partitioning between two anaerobic terminal oxidizers of organic matter. ISME Journal, Vol.6 (No.5). pp. 905-914. ISSN 1751-7362

Carbonero, Franck, Oakley, Brian B., Hawkins, Robert J. and Purdy, Kevin J.. (2012) Genotypic distribution of a specialist model microorganism, methanosaeta, along an estuarine gradient : does metabolic restriction limit niche differentiation potential? Microbial Ecology, 63 (4). pp. 856-864. ISSN 0095-3628

Oakley, Brian B., Dowd, Scot E. and Purdy, Kevin J.. (2011) ThermoPhyl : a software tool for selecting phylogenetically optimized conventional and quantitative-PCR taxon-targeted assays for use with complex samples. FEMS Microbiology Ecology, Vol.77 (No.1). pp. 17-27. ISSN 1574-6941

Mori, Yumi, Purdy, Kevin J., Oakley, Brian B. and Kondo, Ryuji. (2010) Comprehensive detection of phototrophic sulfur bacteria using PCR primers that target reverse dissimilatory sulfite reductase gene. Microbes and Environments, Vol.25 (No.3). pp. 190-196. ISSN 1342-6311

Carbonero, Franck, Oakley, Brian B. and Purdy, Kevin J. (2010) Corrigendum to "Improving the isolation of anaerobes on solid media: the example of the fastidious Methanosaeta" (vol 80, pg 203, 2010). Journal of Microbiological Methods, Vol.82 (No.1). p. 112. ISSN 0167-7012

Morris, C. E., Sands, D. C., Vanneste, J. L., Montarry, J., Oakley, Brian B., Guilbaud, C. and Glaux, C.. (2010) Inferring the evolutionary history of the plant pathogen pseudomonas syringae from its biogeography in headwaters of rivers in North America, Europe, and New Zealand. mBio, Vol.1 (No.3). Article no. e00107-10. ISSN 2150-7511

Oakley, Brian B., Carbonero, Franck, van der Gast, Christopher J., Hawkins, Robert J. and Purdy, Kevin J.. (2010) Evolutionary divergence and biogeography of sympatric niche-differentiated bacterial populations. ISME Journal, Vol.4 (No.4). pp. 488-497. ISSN 1751-7362

Ma, Siyan, Concilio, Amy, Oakley, Brian B., North, Malcolm and Chen, Jiquan. (2010) Spatial variability in microclimate in a mixed-conifer forest before and after thinning and burning treatments. Forest Ecology and Management, Vol.259 (No.5). pp. 904-915. ISSN 0378-1127

Carbonero, Franck, Oakley, Brian B. and Purdy, Kevin J.. (2010) Improving the isolation of anaerobes on solid media: the example of the fastidious Methanosaeta. Journal of Microbiological Methods, Vol.80 (No.2). pp. 203-205. ISSN 0167-7012

Purdy, Kevin J., Hurd, Paul J., Moya-Laraño, Jordi, Trimmer, Mark, Oakley, Brian B. and Woodward, Guy. (2010) Systems biology for ecology : from molecules to ecosystems. Advances in Ecological Research, Vol.43 . pp. 87-149. ISSN 0065-2504

Schloss, Patrick D., Westcott, Sarah L., Ryabin, Thomas, Hall, Justine R., Hartmann, Martin, Hollister, Emily B., Lesniewski, Ryan A., Oakley, Brian B., Parks, Donovan H., Robinson, Courtney J., Sahl, Jason W., Stres, Blaz, Thallinger, Gerhard G., Van Horn, David J. and Weber, Carolyn F.. (2009) Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Applied and Environmental Microbiology, Vol.75 (No.23). pp. 7537-7541. ISSN 0099-2240