Journal Article

Abrams, William R., Madsen, Jens, Gaiha, Gaurav D., Palaniyar, Nades, Dong, Tao, Mitchell, Daniel A. and Clark, Howard W. (2013) Surfactant protein D modulates HIV infection of both T-cells and dendritic cells. PLoS One, Volume 8 (Number 3). Article no. e59047. doi:10.1371/journal.pone.0059047

Achtman, Mark (2011) A broad brush, global overview of bacterial sexuality. PLoS Genetics, Volume 7 (Number 8). Article number e1002255. doi:10.1371/journal.pgen.1002255

Adams, Sally, Manfield, Ian, Stockley, Peter and Carré, Isabelle A. (2015) Revised morning loops of the Arabidopsis circadian clock based on analyses of direct regulatory interactions. PLoS One, 10 (12). e0143943. doi:10.1371/journal.pone.0143943

Al-Izzi, Sami C., Rowlands, George, Sens, Pierre and Turner, Matthew S. (2018) Hydro-osmotic instabilities in active membrane tubes. Physical Review Letters, 120 (13). 138102. doi:10.1103/PhysRevLett.120.138102

Al-Lehyani, Ibrahim H., Grime, John M. A., Bano, Matthew, McKelvey, Kim M. (Kim Martin) and Allen, M. P. (2013) Coarse-grained simulation of transmembrane peptides in the gel phase. Journal of Computational Physics, Volume 238 . pp. 97-105. doi:10.1016/j.jcp.2012.12.014

Amin, Munia, Porter, Steven L. and Soyer, Orkun S. (2013) Split histidine kinases enable ultrasensitivity and bistability in two-component signaling networks. PLoS Computational Biology, Volume 9 (Number 3). Article no. e1002949. doi:10.1371/journal.pcbi.1002949

Amin, Nader T., Wallis, A. Katrine, Wells, Stephen A., Rowe, Michelle L., Williamson, Richard A., Howard, Mark J. and Freedman, R. B. (2013) High-resolution NMR studies of structure and dynamics of human ERp27 indicate extensive interdomain flexibility. Biochemical Journal, Volume 450 (Number 2). pp. 321-332. doi:10.1042/BJ20121635

Armond, Jonathan W., Saha, Krishanu, Rana, Anas A., Oates, Chris J., Jaenisch, Rudolf, Nicodemi, Mario and Mukherjee, Sach (2014) A stochastic model dissects cell states in biological transition processes. Scientific Reports, Volume 4 . Article number 3692. doi:10.1038/srep03692

Armond, Jonathan W., Vladimirou, Elina, Erent, Muriel, McAinsh, Andrew D. and Burroughs, Nigel John (2015) Probing microtubule polymerisation state at single kinetochores during metaphase chromosome motion. Journal of Cell Science, Volume 128 (Number 10). pp. 1991-2001. doi:10.1242/jcs.168682

Arnoldt, Hinrich, Timme, Marc and Grosskinsky, Stefan (2012) Frequency-dependent fitness induces multistability in coevolutionary dynamics. Journal of The Royal Society Interface, Vol.9 (No.77). pp. 3387-3396. doi:10.1098/rsif.2012.0464

Baker, Ysobel R., Chen, Jinfeng, Brown, Jason, El-Sagheer, Afaf H., Wiseman, Philip, Johnson, Errin, Goddard, Paul and Brown, Tom (2018) Preparation and characterization of manganese, cobalt and zinc DNA nanoflowers with tuneable morphology, DNA content and size. Nucleic Acids Research, 46 (15). pp. 7495-7505. doi:10.1093/nar/gky630

Baniukiewicz, Piotr, Collier, Sharon and Bretschneider, Till (2018) QuimP : analyzing transmembrane signalling in highly deformable cells. Bioinformatics, 34 (15). pp. 2695-2697. bty169. doi:10.1093/bioinformatics/bty169

Barnett, James P., Millard, Andrew D., Ksibe, Amira Z., Scanlan, David J., Schmid, Ralf and Blindauer, Claudia A. (2012) Mining genomes of marine cyanobacteria for elements of zinc homeostasis. Frontiers in Microbiology, Volume 3 . Article number 142. doi:10.3389/fmicb.2012.00142

Barnett, James P., Dr., Blindauer, Claudia A., Kassaar, Omar, Khazaipoul, Siavash, Martin, Esther M., Sadler, P. J. and Stewart, Alan J. S. (2013) Allosteric modulation of zinc speciation by fatty acids. Biochimica et Biophysica Acta (BBA) - General Subjects, Volume 830 (Number 12). doi:10.1016/j.bbagen.2013.05.028

Baronchelli, Andrea, Chater, Nick, Christiansen, Morten H. and Pastor-Satorras, R. (2013) Evolution in a changing environment. PLoS ONE, Vol.8 (No.1). e52742. doi:10.1371/journal.pone.0052742

Baronchelli, Andrea, Chater, Nick, Pastor-Satorras, R. and Christiansen, Morten H. (2012) The biological origin of linguistic diversity. PLoS One, Vol.7 (No.10). e48029. doi:10.1371/journal.pone.0048029

Berg, Hugo van den , Ladell, Kristin, Miners, Kelly, Laugel, Bruno, Llewellyn-Lacey, Sian, Clement, Mathew, Cole, David K., Gostick, Emma, Wooldridge, L., Sewell, Andrew K., Bridgeman, John S. and Price, D. A. (2013) Cellular-level versus receptor-level response threshold hierarchies in T-Cell activation. Frontiers in Immunology, Volume 4 . Article number 200. doi:10.3389/fimmu.2013.00250

Bila, J., Mortensen, C. N., Andresen, M., Vicente, Joana G. and Wulff, E. G. (2013) Xanthomonas campestris pv. campestris race 1 is the main causal agent of black rot of Brassicas in Southern Mozambique. African Journal of Biotechnology, Volume 12 (Number 6). pp. 602-610.

Bingle, Lewis E. H., Constantinidou, Chrystala, Shaw, Robert K., Islam, Md. Shahidul, Patel, Mala, Snyder, Lori A. S., Lee, David J., Penn, C. W., Busby, Stephen J. W. and Pallen, Mark J. (2014) Microarray analysis of the ler regulon in enteropathogenic and enterohaemorrhagic escherichia coli strains. PLoS One, Volume 9 (Number 1). e80160. doi:10.1371/journal.pone.0080160

Blanc-Mathieu, Romain, Verhelst, Bram, Derelle, Evelyne, Rombauts, Stephane, Bouget, François-Yves , Carré, Isabelle A., Château, Annie, Eyre-Walker, Adam, Grimsley, Nigel, Moreau, Hervé, Piégu, Benoit, Rivals, Eric , Schackwitz, Wendy, Peer, Yves van de and Piganeau, Gwenaël (2014) An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies. BMC Genomics, Volume 15 . pp. 1-11. Article number 1103. doi:10.1186/1471-2164-15-1103

Bland, C., Hartmann, E. M., Christie-Oleza, Joseph Alexander, Fernandez, Bernard and Armengaud, J. (2014) N-Terminal-oriented proteogenomics of the marine bacterium Roseobacter Denitrificans Och114 using N-Succinimidyloxycarbonylmethyl)tris(2,4,6-trimethoxyphenyl)phosphonium bromide (TMPP) labeling and diagonal chromatography. Molecular & Cellular Proteomics, Volume 13 (Number 5). pp. 1369-1381. doi:10.1074/mcp.O113.032854

Bridges, Rebecca G., Sohn, Sook-Young, Wright, Jordan L., Leppard, Keith and Hearing, Patrick (2016) The adenovirus E4-ORF3 protein stimulates SUMOylation of general transcription factor TFII-I to direct proteasomal degradation. mBio, 7 (1). e02184-15. doi:10.1128/mBio.02184-15

(2014) Uterine selection of human embryos at implantation. Scientific Reports, Volume 4 . Article number 3894. doi:10.1038/srep03894

Brown, Paul E., Baxter, Laura, Hickman, Richard J., Beynon, Jim, Moore, Jonathan D. and Ott, Sascha (2013) MEME-LaB : motif analysis in clusters. Bioinformatics . doi:10.1093/bioinformatics/btt248

Brumley, Douglas R., Polin, Marco, Pedley, T. J. and Goldstein, Raymond E. (2015) Metachronal waves in the flagellar beating of Volvox and their hydrodynamic origin. Interface, Number 12 . pp. 1-12. Article number 20141358. doi:10.1098/rsif.2014.1358

Bräutigam, Katharina, Vining, Kelly J., Lafon-Placette, Clément, Fossdal, Carl G., Mirouze, Marie, Jose, Gutiérrez-Marcos, Fluch, Silvia, Fraga, Mario Fernández, Guevara, M. Ángeles, Abarca, Dolores, Johnsen, Øystein, Maury, Stéphane, Strauss, Steven H., Campbell, Malcolm M., Rohde, Antje, Díaz-Sala, Carmen and Cervera, María-Teresa (2013) Epigenetic regulation of adaptive responses of forest tree species to the environment. Ecology and Evolution, Volume 3 (Number 2). pp. 399-415. doi:10.1002/ece3.461

Bugg, Tim (2012) Biosynthesis : imaging cell-wall biosynthesis live. Nature Chemistry, Vol.5 (No.1). pp. 10-12. doi:10.1038/nchem.1538

Burgess, Selena G., Mukherjee, Manjeet, Sabir, Sarah, Joseph, Nimesh, Gutiérrez-Caballero, Christina, Richards, Mark W., Huguenin‐Dezot, Nicolas, Chin, Jason W., Kennedy, Eileen J., Pfuhl, Mark, Royle, Stephen J., Gergely, Fanni and Bayliss, Richard (2018) Mitotic spindle association of TACC3 requires Aurora‐A‐dependent stabilization of a cryptic α‐helix. The EMBO Journal, 37 (8). e97902. doi:10.15252/embj.201797902

Busi, R. (Roberto), Neve, Paul and Powles, Stephen B. (2013) Evolved polygenic herbicide resistance in Lolium rigidum by low-dose herbicide selection within standing genetic variation. Evolutionary Applications, Volume 6 (Number 2). pp. 231-242. doi:10.1111/j.1752-4571.2012.00282.x

Busi, Roberto, Vila-Aiub, Martin M., Beckie, Hugh John, Gaines, Todd A., Goggin, Danica E., Kaundun, Shiv S., Lacoste, Myrtille, Neve, Paul, Nissen, Scott Jay, Norsworthy, Jason K., Renton, M., Shaner, Dale L., Tranel, Patrick J., Wright, Terry R., Yu, Qin and Powles, Stephen B. (2013) Herbicide-resistant weeds : from research and knowledge to future needs. Evolutionary Applications, Volume 6 (Number 8). pp. 1218-1221. doi:10.1111/eva.12098

Carbonero, Franck, Oakley, Brian B. and Purdy, Kevin J. (2014) Metabolic flexibility as a major predictor of spatial distribution in microbial communities. PLoS One, Volume 9 (Number 1). Article number e85105. doi:10.1371/journal.pone.0085105

Carpenter, Byron and Tate, Christopher G. (2017) Active state structures of G protein-coupled receptors highlight the similarities and differences in the G protein and arrestin coupling interfaces. Current Opinion in Structural Biology, 45 . pp. 124-132. doi:10.1016/j.sbi.2017.04.010

Carrera, Javier and Jaramillo, Alfonso (2013) Automated design of bacterial genome sequences. BMC Systems Biology, Volume 7 (Number 1). Article number 108. doi:10.1186/1752-0509-7-108

Carslake, David, Grant, Wyn, Green, Laura E., Cave, Jonathan A. K., Greaves, Justin, Keeling, Matthew James, McEldowney, John F., Weldegebriel, Habtu Tadesse and Medley, Graham (2011) Endemic cattle diseases : comparative epidemiology and governance. Royal Society of London. Philosophical Transactions B. Biological Sciences, Vol.366 (No.1573). pp. 1975-1986. doi:10.1098/rstb.2010.0396

Carslake, David, Townley, Stuart and Hodgson, David J. (2009) Patterns and rules for sensitivity and elasticity in population projection matrices. Ecology, Vol.90 (No.11). pp. 3258-3267. doi:10.1890/08-1188.1

Carter, Anthony D., Bonyadi, Roxanna and Gifford, Miriam L. (2013) The use of fluorescence-activated cell sorting in studying plant development and environmental responses. The International Journal of Developmental Biology, Volume 57 . pp. 545-552. doi:10.1387/ijdb.130195mg

Castro, Thiago L. P., Seyffert, Nubia, Ramos, Rommel T. J., Barbosa, Silvanira, Carvalho, Rodrigo D. O., Pinto, Anne Cybelle, Carneiro, Adriana Ribeiro, Silva, Wanderson Marques, Pacheco, Luis G. C., Downson, Christopher G., Schneider, Maria P. C., Miyoshi, Anderson, Azevedo, V. (Vasco) and Silva, Artur (2013) Ion torrent-based transcriptional assessment of a Corynebacterium pseudotuberculosis equi strain reveals denaturing high-performance liquid chromatography a promising rRNA depletion method. Microbial Biotechnology, Volume 6 (Number 2). pp. 168-177. doi:10.1111/1751-7915.12020

Caudron, Quentin, Donnelly, Simon R., Brand, Samuel and Timofeeva, Yulia (2012) Computational convergence of the path integral for real dendritic morphologies. The Journal of Mathematical Neuroscience, Volume 2 (Number 1). doi:10.1186/2190-8567-2-11

Chan, Jacqueline, Halachev, Mihail R., Loman, Nicholas J., Constantinidou, Chrystala and Pallen, Mark J. (2012) Defining bacterial species in the genomic era : insights from the genus Acinetobacter. BMC Microbiology, 12 (1). 302. doi:10.1186/1471-2180-12-302

Chen, Li I., Sooranna, Suren R., Lei, Kaiyu, Kandola, Mandeep, Bennett, Phillip, Liang, Zhiqing, Grammatopoulos, Dimitris and Johnson, Mark R. (2012) Cyclic AMP increases COX-2 expression via mitogen-activated kinase in human myometrial cells. Journal of Cellular and Molecular Medicine, Volume 16 (Number 7). pp. 1447-1460. doi:10.1111/j.1582-4934.2011.01413.x

Chen, Yixiang, Wright, Jordan L., Meng, Xueqiong and Leppard, Keith (2015) Promyelocytic leukemia protein isoform II promotes transcription factor recruitment to activate interferon β and interferon-responsive gene expression. Molecular and Cellular Biology, Volume 35 (Number 10). pp. 1660-1672. doi:10.1128/MCB.01478-14

Chew, Ting Gang, Huang, Junqi, Palani, Saravanan, Sommese, Ruth, Kamnev, Anton, Hatano, Tomoyuki, Gu, Ying, Oliferenko, Snezhana, Sivaramakrishnan, Sivaraj and Balasubramanian, Mohan K. (2017) Actin turnover maintains actin filament homeostasis during cytokinetic ring contraction. The Journal of Cell Biology, 216 (9). 2657. doi:10.1083/jcb.201701104

Christie-Oleza, Joseph Alexander and Armengaud, Jean (2010) In-depth analysis of exoproteomes from marine bacteria by shotgun liquid chromatography-tandem mass spectrometry : the Ruegeria pomeroyi DSS-3 case-study. Marine Drugs, Volume 8 (Number 8). pp. 2223-2239. doi:10.3390/md8082223

The Genographic Consortium (Including: Clarke, Andrew C., Prost, Stefan, Stanton, Jo-Ann L., White, W Timothy J., Kaplan, Matthew E. and Matisoo-Smith, Lisa). (2014) From cheek swabs to consensus sequences : an A to Z protocol for high-throughput DNA sequencing of complete human mitochondrial genomes. BMC Genomics, Volume 15 (Number 1). Article number 68. doi:10.1186/1471-2164-15-68

Clarke, Nicholas I. and Royle, Stephen J. (2018) FerriTag is a new genetically-encoded inducible tag for correlative light-electron microscopy. Nature Communications, 9 (1). 2604. doi:10.1038/s41467-018-04993-0

Click, Arielle, Savaliya, Chandni H, Kienle, Simone, Herrmann, Matthias and Pires-da Silva, André Francisco (2009) Natural variation of outcrossing in the hermaphroditic nematode Pristionchus pacificus. BMC Evolutionary Biology, Volume 9 (Number 1). Article no.75. doi:10.1186/1471-2148-9-75

Collier, Sharon, Paschke, Peggy, Kay, Robert R. and Bretschneider, Till (2017) Image based modeling of bleb site selection. Scientific Reports, 7 . 6692. doi:10.1038/s41598-017-06875-9

Constantinidou, Chrystala, Sergeant, Martin J., Cogan, Tristan, Penn, Charles W. and Pallen, Mark J. (2012) High-throughput sequencing of 16S rRNA gene amplicons : effects of extraction procedure, primer length and annealing temperature. PLoS One, Volume 7 (Number 5). Article number e38094. doi:10.1371/journal.pone.0038094

Conti, Lucio, Nelis, Stuart, Zhang, Cunjin, Woodcock, Ailidh, Swarup, Ranjan, Galbiati, Massimo, Tonelli, Chiara, Napier, R., Hedden, Peter, Bennett, Malcolm J. and Sadanandom, Ari (2014) Small ubiquitin-like modifier protein, SUMO enables plants to control growth independently of the phytohormone gibberellin. Developmental Cell, Volume 28 (Number 1). pp. 102-110. doi:10.1016/j.devcel.2013.12.004

Contino, Matteo, Lushi, Enkeleida, Tuval, Idan, Kantsler, Vasily and Polin, Marco (2015) Microalgae scatter off solid surfaces by hydrodynamic and contact forces. Physical Review Letters, 115 (25). pp. 1-5. 258102. doi:10.1103/PhysRevLett.115.258102

Cook, Jonathan P., de Wolf, Elizabeth and Dale, Nicholas (2019) Cx26 keratitis ichthyosis deafness syndrome mutations trigger alternative splicing of Cx26 to prevent expression and cause toxicity in vitro. Royal Society Open Science , 6 (8). 191128. doi:10.1098/rsos.191128

Costa, Maria J. (Maria João), Finkenstädt, Bärbel, Gould, Peter D., Foreman, Julia, Halliday, Karen J., Hall, Anthony, Roche, Véronique, Lévi, Francis A. and Rand, D. A. (David A.) (2013) Inference on periodicity of circadian time series. Biostatistics, Volume 14 (Number 4). pp. 792-806. doi:10.1093/biostatistics/kxt020

Daniels, D. Robert and Turner, Matthew S. (2013) Islands of conformational stability for Filopodia. PLoS One, Volume 8 (Number 3). Article no. e59010. doi:10.1371/journal.pone.0059010

Datta, Samik, Bull, James C., Budge, Giles E. and Keeling, Matthew James (2013) Modelling the spread of American foulbrood in honeybees. Journal of The Royal Society Interface, Volume 10 (Number 88). Article number 20130650. doi:10.1098/rsif.2013.0650

Davies, Lawrence O., Schäfer, Hendrik, Marshall, Samantha, Bramke, Irene, Oliver, Robin G. and Bending, G. D. (2013) Light structures phototroph, bacterial and fungal communities at the soil surface. PLoS One, Volume 8 (Number 7). Article number e69048. doi:10.1371/journal.pone.0069048

Dawson, Peter Michael, Werkman, Marleen, Brooks-Pollock, Ellen and Tildesley, Michael J. (2015) Epidemic predictions in an imperfect world : modelling disease spread with partial data. Proceedings of the Royal Society B: Biological Sciences, Volume 282 (Number 1808). Article number 20150205. doi:10.1098/rspb.2015.0205

Deller, Robert C., Pessin, Jeffrey E., Vatish, Manu, Mitchell, Daniel A. and Gibson, Matthew I. (2016) Enhanced non-vitreous cryopreservation of immortalized and primary cells by ice-growth inhibiting polymers. Biomaterials Science, 4 (7). pp. 1079-1084. doi:10.1039/c6bm00129g

Didelot, Xavier, Bowden, Rory, Street, Teresa, Golubchik, Tanya, Spencer, Chris, McVean, Gil, Sangal, Vartul, Anjum, Muna F., Achtman, Mark, Falush, Daniel and Donnelly, Peter (2011) Recombination and population structure in salmonella enterica. PLoS Genetics, Volume 7 (Number 7). Article number e1002191. doi:10.1371/journal.pgen.1002191

Dilly, Suzanne J., Beecham, Matthew P., Brown, Steven P., Griffin, John M., Clark, Andrew J., Griffin, Craig D., Marshall, Jacqueline, Napier, R. (Richard), Taylor, Paul C. and Marsh, Andrew (2006) Novel tertiary amine oxide surfaces that resist non-specific protein adsorption. Langmuir, Vol.22 (No.19). pp. 8144-8150. doi:10.1021/la060743j

Dow, Claire E., Rodger, Alison, Roper, David I. and Berg, Hugo van den (2013) A model of membrane contraction predicting initiation and completion of bacterial cell division. Integrative Biology (Number 5). pp. 778-795. doi:10.1039/c3ib20273a

Dowler, Elizabeth (2012) Philip Reid Payne, Professor of Nutrition, London School of Hygiene and Tropical Medicine (30 July 1928–9 January 2012). Proceedings of the Nutrition Society, Volume 71 (Number 4). pp. 639-640. doi:10.1017/S0029665112000286

Dowling, Andrea J., Wilkinson, Paul A., Holden, Matthew T. G., Quail, Michael A., Bentley, Stephen D., Reger, Julia, Waterfield, Nicholas R., Titball, Richard W. and ffrench-Constant, Richard H. (2010) Genome-wide analysis reveals loci encoding anti-macrophage factors in the human pathogen burkholderia pseudomallei K96243. PLoS One, Volume 5 (Number 12). Article number e15693. doi:10.1371/journal.pone.0015693

Drechsler, Hauke and McAinsh, Andrew D. (2012) Exotic mitotic mechanisms. Open Biology, Vol.2 . Article number 120140. doi:10.1098/rsob.120140

Du, Cheng-Jin, Hawkins, Phillip T., Stephens, Len R. and Bretschneider, Till (2013) 3D time series analysis of cell shape using Laplacian approaches. BMC Bioinformatics, Volume 14 (Number 1). Article number 296. doi:10.1186/1471-2105-14-296

Dudka, Damian, Noatynska, Anna, Smith, Christopher, A., Liaudet, Nicolas, McAinsh, Andrew D. and Meraldi, Patrick (2018) Complete microtubule–kinetochore occupancy favours the segregation of merotelic attachments. Nature Communications, 9 (1). doi:10.1038/s41467-018-04427-x

Dyson, Louise, Holmes, Alexander, Li, Ang and Kulesa, Paul M. (2018) A chemotactic model of trunk neural crest cell migration. Genesis: The Journal of Genetics and Development . e23239. doi:10.1002/dvg.23239 (In Press)

(2013) Esperanto for histones : CENP-A, not CenH3, is the centromeric histone H3 variant. Chromosome Research, Volume 21 (Number 2). pp. 101-106. doi:10.1007/s10577-013-9347-y

Eichmann, Ruth and Schäfer, P. (Patrick) (2012) The endoplasmic reticulum in plant immunity and cell death. Frontiers in Plant Science, Volume 3 . Article number 200. doi:10.3389/fpls.2012.00200

Elashry, Abdelnaser, Okumoto, Sakiko, Siddique, Shahid, Koch, Wolfgang, Kreil, David and Bohlmann, Holger (2013) The AAP gene family for amino acid permeases contributes to development of the cyst nematode Heterodera schachtii in roots of Arabidopsis. Plant Physiology and Biochemistry, Volume 70 . pp. 379-386. doi:10.1016/j.plaphy.2013.05.016

Elias, Dafydd M. O., Rowe, Rebecca L., Pereira, M. Glória, Stott, Andrew W., Barnes, Christopher J., Bending, G. D. and McNamara, Niall P. (2017) Functional differences in the microbial processing of recent assimilates under two contrasting perennial bioenergy plantations. Soil Biology and Biochemistry, 114 . pp. 248-262. doi:10.1016/j.soilbio.2017.07.026

Elliott, Charles M., Graser, Carsten, Hobbs, Graham, Kornhuber, R. and Wolf, Maren-Wanda (2016) A variational approach to particles in lipid membranes. Archive for Rational Mechanics and Analysis, 222 (2). pp. 1011-1075. doi:10.1007/s00205-016-1016-9

Elliott, Charles M., Stinner, Björn and Venkataraman, Chandrasekhar (2012) Modelling cell motility and chemotaxis with evolving surface finite elements. Journal of The Royal Society Interface, Volume 9 (Number 76). pp. 3027-3044. doi:10.1098/rsif.2012.0276

(2013) Meeting report : 1st international functional metagenomics workshop May 7–8, 2012, St. Jacobs, Ontario, Canada. Standards in Genomic Sciences, Volume 8 (Number 1). pp. 106-111. doi:10.4056/sigs.3406845

Eskat, Anja, Deng, Wen, Hofmeister, Antje, Rudolphi, Sven, Emmerth, Stephan, Hellwig, Daniela, Ulbricht, Tobias, Döring, Volker, Bancroft, James M., McAinsh, Andrew D., Cardoso, M. Cristina, Meraldi, Patrick, Hoischen, Christian, Leonhardt, Heinrich and Diekmann, Stephan (2012) Step-wise assembly, maturation and dynamic behavior of the human CENP-P/O/R/Q/U kinetochore sub-complex. PLoS One, Vol.7 (No.9). e44717. doi:10.1371/journal.pone.0044717

Evans, Neil D. (2013) Controlling nonlinear infinite-dimensional systems via the initial state. SIAM Journal on Control and Optimization, 51 (5). pp. 3757-3780. doi:10.1137/110823080

Eyice, Özge, Namura, Motonobu, Chen, Yin, Mead, A. (Andrew), Samavedam, Siva and Schäfer, Hendrik (2015) SIP metagenomics identifies uncultivated Methylophilaceae as dimethylsulphide degrading bacteria in soil and lake sediment. The ISME Journal . pp. 1-13. doi:10.1038/ismej.2015.37

Fabre, Laëtitia, Zhang, Jian, Guigon, Ghislaine, Le Hello, Simon, Guibert, Véronique, Accou-Demartin, Marie, de Romans, Saïana, Lim, Catherine, Roux, Chrystelle, Passet, Virginie, Diancourt, Laure, Guibourdenche, Martine, Issenhuth-Jeanjean, Sylvie, Achtman, Mark, Brisse, Sylvain, Sola, Christophe and Weill, François-Xavier (2012) CRISPR typing and subtyping for improved laboratory surveillance of salmonella infections. PLoS One, Volume 7 (Number 5). Article number e36995. doi:10.1371/journal.pone.0036995

Feeney, Mistianne, Frigerio, Lorenzo, Kohalmi, Susanne E., Cui, Yuhai and Menassa, Rima (2013) Reprogramming cells to study vacuolar development. Frontiers in Plant Science, Volume 4 . Article number 493. doi:10.3389/fpls.2013.00493

Feillet, Céline‏, Horst, Gijsbertus Theodorus Johannes van der‏, Lévi, Francis A., Rand, D. A. and Delaunay, Franck (2015) Coupling between the circadian clock and cell cycle oscillators : implication for healthy cells and malignant growth. Frontiers in Neurology, Volume 6 . Article number 96. doi:10.3389/fneur.2015.00096

Firczuk, Helena, Kannambath, Shichina, Pahle, Jürgen, Claydon, Amy J., Beynon, R. J. (Robert J.), Duncan, John, Westerhoff, Hans V., Mendes, Pedro and McCarthy, John E. G. (2013) An in vivo control map for the eukaryotic mRNA translation machinery. Molecular Systems Biology, Vol.9 . p. 635. doi:10.1038/msb.2012.73

Font-Burgada, Joan, Reina, Oscar, Rossell, David and Azorin, Fernando (2013) chroGPS, a global chromatin positioning system for the functional analysis and visualization of the epigenome. Nucleic Acids Research, Volume 42 (Number 4). pp. 2126-2137. doi:10.1093/nar/gkt1186

Footitt, Steven, Huang, Ziyue, Clay, Heather A., Mead, A. (Andrew) and Finch-Savage, William E. (2013) Temperature, light and nitrate sensing coordinate Arabidopsis seed dormancy cycling resulting in winter and summer annual phenotypes. Plant Journal, Volume 74 (Number 6). pp. 1003-1015. doi:10.1111/tpj.12186

Forrest, Michael D. (2013) Mathematical model of bursting in dissociated Purkinje neurons. PLoS One, Volume 8 (Number 8). e68765. doi:10.1371/journal.pone.0068765

Forrest, Michael D., Wall, Mark J., Press, Daniel A. and Feng, Jianfeng (2012) The sodium-potassium pump controls the intrinsic firing of the cerebellar Purkinje neuron. PLoS ONE, Vol.7 (No.12). e51169. doi:10.1371/journal.pone.0051169

Freedman, R. B. (2009) A non-catalytic disulphide bond regulating redox flux in the ER oxidative folding pathway. EMBO Journal, Vol.28 . pp. 169-170. doi:10.1038/emboj.2008.293

Fuchs, Evelyn, Hass, Alexander K., Spooner, Robert A. , Yoshimura, Shin-ichiro , Lord, Mike and Barr, Francis A. (2007) Specific Rab GTPase-activating proteins define the Shiga toxin and epidermal growth factor uptake pathways. Journal of Cell Biology, Vol.177 (No.6). pp. 1133-1143. doi:10.1083/jcb.200612068

García-Nafría, Javier, Lee, Yang, Bai, Xiaochen, Carpenter, Byron and Tate, Christopher G. (2018) Cryo-EM structure of the adenosine A2A receptor coupled to an engineered heterotrimeric G protein. eLife, 2018 (7). e35946. doi:10.7554/eLife.35946

Ge, Tian, Kendrick, Keith M. and Feng, Jianfeng (2009) A novel extended Granger Causal model approach demonstrates brain hemispheric differences during face recognition learning. PL o S Computational Biology, Vol.5 (No.11). doi:10.1371/journal.pcbi.1000570

Ge, Tian, Tian, Xiaoying, Kurths, Jürgen, Feng, Jianfeng and Lin, Wei (2014) Achieving modulated oscillations by feedback control. Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Volume 90 (Number 2). Article number 022909. doi:10.1103/PhysRevE.90.022909

Gerc, Amy J., Song, Lijiang, Challis, Gregory L., Stanley-Wall, Nicola R. and Coulthurst, Sarah J. (2012) The insect pathogen Serratia marcescens Db10 uses a hybrid non-ribosomal peptide synthetase-polyketide synthase to produce the antibiotic althiomycin. PLoS One, Vol.7 (No.9). e44673. doi:10.1371/journal.pone.0044673

Ghafari , Fataneh, Gutierrez , Carlos G. and Hartshorne, Geraldine M. (2007) Apoptosis in mouse fetal and neonatal oocytes during meiotic prophase one. BMC Development Biology, Vol.7 . p. 87. doi:10.1186/1471-213X-7-87

(2014) Nitric oxide sensing in plants is mediated by proteolytic control of group VII ERF transcription factors. Molecular Cell, Volume 53 (Number 3). pp. 369-379. doi:10.1016/j.molcel.2013.12.020

Gifford, Miriam L., Banta, Joshua A., Katari, Manpreet S., Hulsmans, Jo, Chen, Lisa, Ristova, Daniela, Tranchina, Daniel, Purugganan, Michael D., Coruzzi, Gloria, Birnbaum, Kenneth D., Rosas, Ulises and Cibrian-Jaramillo, Angelica (2013) Plasticity regulators modulate specific root traits in discrete nitrogen environments. PLoS Genetics, Volume 9 (Number 9). Article number e1003760. doi:10.1371/journal.pgen.1003760

Gomes, M. Gabriela M., Lipsitch, Marc, Wargo, Andrew R., Kurath, Gael, Rebelo, Carlota, Medley, Graham and Coutinho, Antonio (2014) A missing dimension in measures of vaccination impacts. PLoS Pathogens, Volume 10 (Number 3). Article number e1003849. doi:10.1371/journal.ppat.1003849

Gosling, Paul, Mead, A. (Andrew), Proctor, Maude, Hammond, John P. and Bending, G. D. (2013) Contrasting arbuscular mycorrhizal communities colonizing different host plants show a similar response to a soil phosphorus concentration gradient. New Phytologist, Volume 198 (Number 2). pp. 546-556. doi:10.1111/nph.12169

Gould, Peter D., Ugarte, Nicolas, Domijan, Mirela, Costa, Maria J. (Maria João), Foreman, Julia, MacGregor, Dana, Rose, Ken, Griffiths, Jayne, Millar, A. J. (Andrew J.), Finkenstädt, Bärbel, Penfield, Steven, Rand, D. A. (David A.), Halliday, Karen J. and Hall, Anthony J. W. (2013) Network balance via CRY signalling controls the Arabidopsis circadian clock over ambient temperatures. Molecular Systems Biology, Volume 9 . Article no. 650. doi:10.1038/msb.2013.7

Gould, Phillip S., Dyer, Nigel P., Croft, Wayne D., Ott, Sascha and Easton, A. J. (Andrew J.) (2014) Cellular mRNAs access second ORFs using a novel amino acid sequence-dependent coupled translation termination-reinitiation mechanism. RNA, 20 . pp. 373-381. doi:10.1261/rna.041574.113

Grandjean, Thomas R. B., Chappell, M. J. (Michael J.), Yates, James W. T. and Evans, Neil D. (2014) Structural identifiability analyses of candidate models for in vitro Pitavastatin hepatic uptake. Computer Methods and Programs in Biomedicine, Volume 114 (Number 3). e60-e69. doi:10.1016/j.cmpb.2013.06.013

Greaves, Justin and Grant, Wyn (2010) Crossing the interdisciplinary divide : political science and biological science. Political Studies, Vol.58 (No.2). pp. 320-339. doi:10.1111/j.1467-9248.2009.00828.x

Guo, Shuixia, Wu, Jianhua, Ding, Mingzhou and Feng, Jianfeng (2008) Uncovering interactions in the frequency domain. P L o S Computational Biology , Vol.4 (No.5). doi:10.1371/journal.pcbi.1000087

Gómez-Pereira, Paola R., Hartmann, Manuela, Grob, Carolina, Tarran, Glen A., Martin, Adrian P., Fuchs, Bernhard M., Scanlan, David J. and Zubkov, Mikhail V. (2013) Comparable light stimulation of organic nutrient uptake by SAR11 and Prochlorococcus in the North Atlantic subtropical gyre. The ISME Journal, Vol.7 (No.3). pp. 603-614. doi:10.1038/ismej.2012.126

Hadjipantelis, Pantelis-Zenon, Jones, Nick S., Moriarty, John M., Springate, David A. and Knight, C. G. (Christopher G.) (2013) Function-valued traits in evolution. Journal of The Royal Society Interface, Volume 10 (Number 82). Article: 20121032. doi:10.1098/rsif.2012.1032

Halachev, Mihail R., Loman, Nicholas J. and Pallen, Mark J. (2011) Calculating orthologs in bacteria and archaea : a divide and conquer approach. PLoS One, Volume 6 (Number 12). Article number e28388. doi:10.1371/journal.pone.0028388

Hasan, Muhammad, Fayter, Alice E. R. and Gibson, Matthew I. (2018) Ice recrystallization inhibiting polymers enable glycerol-free cryopreservation of microorganisms. Biomacromolecules, 19 (8). pp. 3371-3376. doi:10.1021/acs.biomac.8b00660 (In Press)

Hattersley, John G., Pérez-Velázquez, J., Chappell, M. J. (Michael J.), Bearup, Daniel James, Roper, David I., Dowson, Christopher G., Bugg, Tim and Evans, Neil D. (2011) Indistinguishability and identifiability of kinetic models for the MurC reaction in peptidoglycan biosynthesis. Computer Methods and Programs in Biomedicine, Vol.104 (No.2). pp. 70-80. doi:10.1016/j.cmpb.2010.07.009

Hearn, Jessica M., Romero-Canelón, Isolda, Qamar, Bushra, Liu, Zhe , Hands-Portman, Ian and Sadler, P. J. (2013) Organometallic iridium(III) anticancer complexes with new mechanisms of action: NCI-60 screening, mitochondrial targeting, and apoptosis. ACS Chemical Biology, Volume 8 (Number 6). pp. 1335-1343. doi:10.1021/cb400070a

Henze, Richard, Mu, Chunyan, Puljiz, Mate, Kamaleson, Nishanthan, Huwald, Jan, Haslegrave, John, Speroni di Fenizio, Pietro, Parker, David, Good, Chris, Rowe, Jonathan E., Ibrahim, Bashar and Dittrich, Peter (2019) Multi-scale stochastic organization-oriented coarse-graining exemplified on the human mitotic checkpoint. Scientific Reports, 9 . 3902 . doi:10.1038/s41598-019-40648-w

Hickman, Richard J., Hill, C., Penfold, Christopher A., Breeze, Emily, Bowden, Laura, Moore, Jonathan D., Zhang, Peijun, Jackson, Alison C., Cooke, Emma J., Bewicke-Copley, Findlay, Mead, A. (Andrew), Beynon, Jim, Wild, David L., Denby, Katherine J., Ott, Sascha and Buchanan-Wollaston, Vicky (2013) A local regulatory network around three NAC transcription factors in stress responses and senescence in Arabidopsis leaves. The Plant Journal, Volume 75 (Number 1). pp. 26-39. doi:10.1111/tpj.12194

Higgins, Helen, Green, Laura E., Green, Martin (Martin J.) and Kaler, Jasmeet (2013) How does reviewing the evidence change veterinary surgeons' beliefs regarding the treatment of ovine footrot? A quantitative and qualitative study. PLoS One, Volume 8 (Number 5). Article number e64175. doi:10.1371/journal.pone.0064175

Hills, Claire E., Kerr, Michael I., Wall, Mark J. and Squires, Paul E. (2013) Visfatin reduces gap junction mediated cell-to-cell communication in proximal tubule-derived epithelial cells. Cellular Physiology & Biochemistry, Volume 32 (Number 5). pp. 1200-1212. doi:10.1159/000354519

Hilton, Sally, Bennett, Amanda J., Keane, Gary, Bending, G. D., Chandler, David, Stobart, Ron and Mills, P. R. (2013) Impact of shortened crop rotation of oilseed rape on soil and rhizosphere microbial diversity in relation to yield decline. PLoS One, Volume 8 (Number 4). e59859. doi:10.1371/journal.pone.0059859

Hinterberger, Amy (2016) Regulating estrangement : human–animal chimeras in postgenomic biology. Science, Technology, & Human Values . doi:10.1177/0162243916685160 (In Press)

Hodgkin, M. N., Hills, Claire E. and Squires, Paul E. (2008) The calcium-sensing receptor and insulin secretion : a role outside systemic control 15 years on. Journal of Endocrinology, Vol.199 (No.1-4). doi:10.1677/JOE-08-0261

Hollingsworth, T. Déirdre, Laeyendecker, Oliver, Shirreff, George, Donnelly, Christl A., Serwadda, David, Wawer, Maria, Kiwanuka, Noah, Nalugoda, Fred, Collinson-Streng, Aleisha, Ssempijja, Victor, Hanage, William P., Quinn, Thomas C., Gray, Ronald H. and Fraser, Christophe (2010) HIV-1 transmitting couples have similar viral load set-points in Rakai, Uganda. PLoS Pathogens, Volume 6 (Number 5). Article no. e1000876. doi:10.1371/journal.ppat.1000876

House, Thomas A. (2014) Epidemiological dynamics of Ebola outbreaks. eLife, Volume 3 . doi:10.7554/eLife.03908

Hsiao, Victoria, Emmanuel de los Santos, L. C., Whitaker, Weston R., Dueber, John E. and Murray, Richard M. (2015) Design and implementation of a biomolecular concentration tracker. ACS Synthetic Biology, 4 (2). pp. 150-161. doi:10.1021/sb500024b

(2017) Guidelines for genome-scale analysis of biological rhythms. Journal of Biological Rhythms, 32 (5). pp. 380-393. doi:10.1177/0748730417728663

Humphreys, Ian R., Clement, Mathew, Marsden, Morgan, Ladell, Kristin, McLaren, James E., Smart, Kathryn, Hindley, James P., Bridgeman, Hayley M., Berg, Hugo van den , Price, D. A., Ager, Ann, Wooldridge, Linda, Godkin, Andrew and Gallimore, Awen M. (2012) Avidity of influenza-specific memory CD8+ T-cell populations decays over time compromising antiviral immunity. European Journal of Immunology, Volume 42 (Number 12). pp. 3235-3242. doi:10.1002/eji.201242575

Hussmann, Frauke, Drummond, Douglas R., Peet, Daniel R., Martin, Douglas S. and Cross, R. A. (2015) Alp7/TACC-Alp14/TOG generates long-lived, fast-growing MTs by an unconventional mechanism. Scientific Reports, 6 . 20653. doi:10.1038/srep20653

Iglesias, Caroline, Meunier, C. (Claude), Manuel, Marin, Timofeeva, Yulia, Delestrée, Nicholas and Zytnicki, D. (2011) Mixed mode oscillations in mouse spinal motoneurons arise from a low excitability state. Journal of Neuroscience, Volume 31 (Number 15). pp. 5829-5840. doi:10.1523/JNEUROSCI.6363-10.2011

Irshad, Zehra, Dimitri, Federica, Christian, Mark and Zammit, Victor A. (2017) Diacylglycerol acyltransferase 2 links glucose utilization to fatty acid oxidation in the brown adipocytes. Journal of Lipid Research, 58 (1). pp. 15-30. doi:10.1194/jlr.M068197

Irvine, Michael Alastair, Bull, James C. (James Christopher) and Keeling, Matthew James (2016) Disease transmission promotes evolution of host spatial patterns. Journal of The Royal Society Interface, 13 (122). 20160463. doi:10.1098/rsif.2016.0463

Jacomin, Anne-Claire, Bescond, Amandine, Soleilhac, Emmanuelle, Gallet, Benoît, Schoehn, Guy, Fauvarque, Marie-Odile and Taillebourg, Emmanuel (2015) The deubiquitinating enzyme UBPY is required for Lysosomal Biogenesis and productive autophagy in drosophila. PLoS One, 10 (11). e0143078. doi:10.1371/journal.pone.0143078

Jacomin, Anne-Claire, Fauvarque, Marie-Odile and Taillebourg, Emmanuel (2016) A functional endosomal pathway is necessary for lysosome biogenesis in Drosophila. BMC Cell Biology, 17 (1). doi:10.1186/s12860-016-0115-7

Jacomin, Anne-Claire, Samavedam, Siva, Charles, Hannah and Nezis, Ioannis P. (2017) iLIR@viral : a web resource for LIR motif-containing proteins in viruses. Autophagy, 13 (10). pp. 1782-1789. doi:10.1080/15548627.2017.1356978

Jadhav, Vaibhav, Hackl, Matthias, Druz, Aliaksandr, Shridhar, Smriti, Chung, Cheng-Yu, Heffner, Kelley M., Kreil, David, Betenbaugh, Mike, Shiloach, Joseph, Barron, Niall, Grillari, Johannes and Borth, Nicole (2013) CHO microRNA engineering is growing up : recent successes and future challenges. Biotechnology Advances, Volume 31 (Number 8). pp. 1501-1513. doi:10.1016/j.biotechadv.2013.07.007

Jenkins, Dafyd J., Finkenstädt, Bärbel and Rand, D. A. (David A.) (2013) A temporal switch model for estimating transcriptional activity in gene expression. Bioinformatics, Volume 29 (Number 9). pp. 1158-1165. doi:10.1093/bioinformatics/btt111

Jin, Tianrong, Li, L., Siow, R. C. M. and Liu, Kuo-Kang (2015) A novel collagen gel-based measurement technique for quantitation of cell contraction force. Journal of The Royal Society Interface, Volume 12 (Number 106). Article number 20141365. doi:10.1098/rsif.2014.1365

Johnson, Samuel, Domínguez-García, Virginia, Donetti, Luca and Muñoz, Miguel A. (Miguel Angel Muñoz Martínez) (2014) Trophic coherence determines food-web stability. Proceedings of the National Academy of Sciences of the United States of America, 111 (50). pp. 17923-17928. doi:10.1073/pnas.1409077111

Kaseda, Kuniyoshi, McAinsh, Andrew D. and Cross, R. A. (2012) Dual pathway spindle assembly increases both the speed and the fidelity of mitosis. Biology Open, Vol.1 (No.1). pp. 12-18. doi:10.1242/bio.2011012

Kaverina, Irina and Straube, Anne (2011) Regulation of cell migration by dynamic microtubules. Seminars in Cell & Developmental Biology, Volume 22 (Number 9). pp. 968-974. doi:10.1016/j.semcdb.2011.09.017

Kerr, Gary W., Sarkar, Sourav and Arumugam, Prakash (2012) How to halve ploidy : lessons from budding yeast meiosis. Cellular and Molecular Life Sciences, Volume 69 (Number 18). pp. 3037-3051. doi:10.1007/s00018-012-0974-9

Kerr, Michael I., Wall, Mark J. and Richardson, Magnus J. E. (2013) Adenosine A1 receptor activation mediates the developmental shift at layer 5 pyramidal cell synapses and is a determinant of mature synaptic strength. The Journal of Physiology, Volume 591 . pp. 3371-3380. doi:10.1113/jphysiol.2012.244392

(2013) DNA barcoding reveals the coral “laboratory-rat”, Stylophora pistillata encompasses multiple identities. Scientific Reports, Volume 3 (Number 1520). Article no. 1520. doi:10.1038/srep01520

Kirk, Paul, Griffin, Jim E., Savage, Richard S., Ghahramani, Zoubin and Wild, David L. (2012) Bayesian correlated clustering to integrate multiple datasets. Bioinformatics, Volume 28 (Number 4). pp. 3290-3297. doi:10.1093/bioinformatics/bts595

Kirkham, Amy R., Lepère, Cécile, Jardillier, Ludwig, Not, Fabrice, Bouman, Heather, Mead, A. (Andrew) and Scanlan, David J. (2013) A global perspective on marine photosynthetic picoeukaryote community structure. The ISME Journal, Volume 7 (Number 5). pp. 922-936. doi:10.1038/ismej.2012.166

Kitchen, James, Moore, Jonathan D., Palmer, Sarah A. and Allaby, Robin G. (2012) MCMC-ODPR : primer design optimization using Markov Chain Monte Carlo sampling. BMC Bioinformatics, Vol.13 (No.1). p. 287. doi:10.1186/1471-2105-13-287

Kitsou-Mylona, Isidora, Burns, Christopher J., Squires, Paul E., Persaud, Shanta J. and Jones, Peter M. (2008) A role for the extracellular calcium-sensing receptor in cell-cell communication in pancreatic islets of Langerhans. Cellular Physiology and Biochemistry, Vol.22 (No.5-6). pp. 557-566. doi:10.1159/000185540

Kothamachu, Varun B., Feliu, Elisenda, Wiuf, Carsten, Cardelli, Luca and Soyer, Orkun S. (2013) Phosphorelays provide tunable signal processing capabilities for the cell. PLoS Computational Biology, Volume 9 (Number 11). Article number e1003322. doi:10.1371/journal.pcbi.1003322

Kuse, Manohar, Wang, Yi-Fang, Kalasannavar, V, Khan, Michael and Rajpoot, Nasir M. (Nasir Mahmood) (2012) Local isotropic phase symmetry measure for detection of beta cells and lymphocytes. Journal of Pathology Informatics, Vol.2 (No.2). doi:10.4103/2153-3539.92028

Kushwaha, Manish, Rostain, William, Prakash, Satya, Duncan, John and Jaramillo, Alfonso (2016) Using RNA as molecular code for programming cellular function. ACS Synthetic Biology, 5 (8). pp. 795-809. doi:10.1021/acssynbio.5b00297

Kuwahara, Hiroyuki and Soyer, Orkun S. (2012) Bistability in feedback circuits as a byproduct of evolution of evolvability. Molecular Systems Biology, Volume 8 (Number 564). Article no. 564. doi:10.1038/msb.2011.98

Ladroue, Christophe, Guo, Shuixia, Kendrick, Keith M. and Feng, Jianfeng (2009) Beyond element-wise interactions: identifying complex interactions in biological processes. PLoS One, Vol.4 (No.9). e6899. doi:10.1371/journal.pone.0006899

Lee, Nick and Motzkau, J. (2012) The biosocial event : responding to innovation in the life sciences. Sociology, Vol.46 (No.3). pp. 426-441. doi:10.1177/0038038511422554

Legrand, Catherine, Ahmed, Usman, Anwar, Attia, Rajpoot, Kashif, Pasha, Sabah, Lambert, Cécile, Davidson, Rose K., Clark , Ian M., Thornalley, Paul J., Henrotin, Yves and Rabbani, Naila (2018) Glycation marker glucosepane increases with the progression of osteoarthritis and correlates with morphological and functional changes of cartilage in vivo. Arthritis Research & Therapy, 20 . 131. doi:10.1186/s13075-018-1636-6

Lenartowski, Robert, Suwińska, Anna, Prusińska, Justyna, Gumowski, Krzysztof and Lenartowska, Marta (2014) Molecular cloning and transcriptional activity of a new Petunia calreticulin gene involved in pistil transmitting tract maturation, progamic phase, and double fertilization. Planta, Volume 239 (Number 2). pp. 437-454. doi:10.1007/s00425-013-1971-4

Leonelli, Sabina, Smirnoff, N., Moore, Jonathan D., Cook, Charis and Bastow, Ruth (2013) Making open data work for plant scientists. Journal of Experimental Botany, Volume 64 (Number 14). pp. 4109-4117. doi:10.1093/jxb/ert273

(2010) The genome of a pathogenic rhodococcus : cooptive virulence underpinned by key gene acquisitions. PLoS Genetics, Volume 6 (Number 9). Article number e1001145. doi:10.1371/journal.pgen.1001145

Li, Huilin, Wells, Stephen A., Jimenez-Roldan, J. Emilio, Römer, Rudolf A., Zhao, Yao, (Researcher in chemistry), Sadler, P. J. and O'Connor, Peter B. (2012) Protein flexibility is key to cisplatin crosslinking in calmodulin. Protein Science, Volume 21 (Number 9). pp. 1269-1279. doi:10.1002/pro.2111

(2010) Systematic integration of experimental data and models in systems biology. BMC Bioinformatics, 11 . 582. doi:10.1186/1471-2105-11-582

Liu, Zhe , Romero-Canelón, Isolda, Qamar, Bushra, Hearn, Jessica M., Habtemariam, Abraha, Barry, Nicolas P. E., Pizarro, Ana M., Clarkson, Guy J. and Sadler, P. J. (2014) The potent oxidant anticancer activity of organoiridium catalysts. Angewandte Chemie International Edition, Volume 53 (Number 15). pp. 3941-3946. doi:10.1002/anie.201311161

Lobelle, Delphine, Kenyon, Emma J., Cook, Kevan J. and Bull, James C. (2013) Local competition and metapopulation processes drive long-term seagrass-epiphyte population dynamics. PLoS One, Volume 8 (Number 2 ). Article no. e57072. doi:10.1371/journal.pone.0057072

Locke, James C. W., Westermark, Pål O., Kramer, Achim and Herzel, Hanspeter (2008) Global parameter search reveals design principles of the mammalian circadian clock. BMC Systems Biology, Vol.2 (No.22). doi:10.1186/1752-0509-2-22

Lord, Mike and Spooner, Robert A. (2011) Ricin trafficking in plant and mammalian cells. Toxins, Volume 3 (Number 7). pp. 787-801. doi:10.3390/toxins3070787

(2014) Oxytocin receptor genotype modulates ventral striatal activity to social cues and response to stressful life events. Biological Psychiatry, 76 (5). pp. 367-376. doi:10.1016/j.biopsych.2013.07.043

López-Ráez, Juan A., Kohlen, Wouter, Charnikhova, Tatsiana, Mulder, Patrick, Undas, Anna K., Sergeant, Martin J., Verstappen, Francel, Bugg, Tim, Thompson, Andrew J., Ruyter-Spira, Carolien and Bouwmeester, Harro (2010) Does abscisic acid affect strigolactone biosynthesis? New Phytologist, Vol.87 (No.2). pp. 343-354. doi:10.1111/j.1469-8137.2010.03291.x

Marín-López, Manuel Alejandro, Planas-Iglesias, Joan, Aguirre-Plans, Joaquim, Bonet, Jaume, Garcia-Garcia, Javier, Fernandez-Fuentes, Narcis and Oliva, Baldo (2018) On the mechanisms of protein interactions : predicting their affinity from unbound tertiary structures. Bioinformatics, 34 (4). pp. 592-598. doi:10.1093/bioinformatics/btx616

McDonald, Sarah M., Sarno, Diana, Scanlan, David J. and Zingone, Adriana (2007) Genetic diversity of eukaryotic ultraphytoplankton in the Gulf of Naples during an annual cycle. Aquatic Microbial Ecology, Volume 50 (Number 1). pp. 75-89. doi:10.3354/ame01148

McFadden, Nora, Arias, Armando, Dry, Inga, Bailey, Dalan, Witteveldt, Jeroen, Evans, David J., Goodfellow, Ian and Simmonds, Peter (2013) Influence of genome-scale RNA structure disruption on the replication of murine norovirus--similar replication kinetics in cell culture but attenuation of viral fitness in vivo. Nucleic Acids Research, Volume 41 (Number 12). pp. 6316-6331. doi:10.1093/nar/gkt334

McLellan, Hazel, Boevink, Petra C., Armstrong, Miles R., Pritchard, Leighton, Gómez-Galera, Sonia, Morales, Juan, Whisson, Stephen C., Beynon, Jim and Birch, Paul R. J. (2013) An RxLR effector from phytophthora infestans prevents re-localisation of two plant NAC transcription factors from the endoplasmic reticulum to the nucleus. PLoS Pathogens, Volume 9 (Number 10). Article number e1003670. doi:10.1371/journal.ppat.1003670

Meigh, Louise, Cook, Daniel Sean, Zhang, Jie and Dale, Nicholas (2015) Rational design of new NO and redox sensitivity into connexin26 hemichannels. Open Biology, Volume 5 (Number 2). pp. 1-9. Article number 140208. doi:10.1098/rsob.140208

Meigh, Louise, Greenhalgh, Sophie A., Rodgers, Thomas L., Cann, Martin J., Roper, David I. and Dale, Nicholas (2013) CO2 directly modulates connexin 26 by formation of carbamate bridges between subunits. eLife, Volume 2 . Article number e01213. doi:10.7554/eLife.01213

Meik, Jesse M. and Pires-da Silva, André Francisco (2009) Evolutionary morphology of the rattlesnake style. BMC Evolutionary Biology, Volume 9 (Number 1). Article no.35. doi:10.1186/1471-2148-9-35

Minas, Giorgos and Rand, D. A. (David A.) (2017) Long-time analytic approximation of large stochastic oscillators : simulation, analysis and inference. PLoS Computational Biology, 13 (7). e1005676. doi:10.1371/journal.pcbi.1005676

Momiji, Hiroshi, Hassall, Kirsty, Featherstone, Karen, McNamara, Anne, Patist, Amanda, Spiller, David G., Christian, Helen, White, Michael R. H., Davis, Julian R. E., Finkenstädt, Bärbel and Rand, D. A. (David A.) (2019) Disentangling juxtacrine from paracrine signalling in dynamic tissue. PLoS Computational Biology . doi:10.1371/journal.pcbi.1007030 (In Press)

Moodley, Yoshan, Linz, Bodo, Bond, Robert P., Nieuwoudt, Martin, Soodyall, Himla, Schlebusch, Carina M., Bernhöft, Steffi, Hale, J. (James), Suerbaum, Sebastian, Mugisha, Lawrence, Van der Merwe, Schalk W. and Achtman, Mark (2012) Age of the association between Helicobacter pylori and man. PLoS Pathogens, Volume 8 (Number 5). Article number e1002693. doi:10.1371/journal.ppat.1002693

Mora-Santos, Maria and Millar, Jonathan B. A. (2013) Checkpoint proteins come under scrutiny. eLife, Volume 2 . Article number e01494. doi:10.7554/eLife.01494

Mos, Magdalena, Godfrey, Emma L., Esparza Franco, Manuel A., Richardson, Kathryn, Davey, John and Ladds, Graham (2013) The role of the RACK1 ortholog Cpc2p in modulating pheromone-induced cell cycle arrest in fission yeast. PLoS One, Volume 8 (Number 7). Article number e65927. doi:10.1371/journal.pone.0065927

Murphy, Ashley R., Laslett, Andrew, O'Brien, Carmel M. and Cameron, Neil R. (2017) Scaffolds for 3D in vitro culture of neural lineage cells. Acta Biomaterialia, 54 . pp. 1-20. doi:10.1016/j.actbio.2017.02.046

Nell, Sandra, Eibach, Daniel, Montano, Valeria, Maady, Ayas, Nkwescheu, Armand, Siri, Jose, Elamin, Wael F., Falush, Daniel, Linz, Bodo, Achtman, Mark, Moodley, Yoshan and Suerbaum, Sebastian (2013) Recent acquisition of Helicobacter pylori by Baka Pygmies. PLoS Genetics, 9 (9). e1003775. doi:10.1371/journal.pgen.1003775

Nguyen, Huy D., Tomitaka, Yasuhiro, Ho, Simon Y. W., Duchêne, Sebastián, Vetten, Heinrich-Josef, Lesemann, D.-E., Walsh, John A., Gibbs, Adrian J. and Ohshima, Kazusato (2013) Turnip mosaic potyvirus probably first spread to Eurasian brassica crops from wild orchids about 1000 years ago. PLoS One, Volume 8 (Number 2). Article no.e55336. doi:10.1371/journal.pone.0055336

Nijjar, Sarbjit and Woodland, Hugh R. (2013) Localisation of RNAs into the germ plasm of vitellogenic xenopus oocytes. PLoS One, Volume 8 (Number 4). Article number e61847. doi:10.1371/journal.pone.0061847

Nijjar, Sarbjit and Woodland, Hugh R. (2013) Protein interactions in Xenopus germ plasm RNP particles. PLoS ONE , Volume 8 (Number 11). Article number e80077. doi:10.1371/journal.pone.0080077

Nixon, Faye M., Honnor, Thomas R., Clarke, Nicholas I., Starling, Georgina, Beckett, Alison J., Johansen, Adam M., Brettschneider, Julia, Prior, Ian A. and Royle, Stephen J. (2017) Microtubule organization within mitotic spindles revealed by serial block face scanning electron microscopy and image analysis. Journal of Cell Science, 130 (10). pp. 1845-1855. doi:10.1242/jcs.203877

Oates, Chris J. and Mukherjee, Sach (2012) Network inference and biological dynamics. Annals of Applied Statistics, Vol.6 (No.3). pp. 1209-1235. doi:10.1214/11-AOAS532

Pahle, Jürgen, Green, Anne K., Dixon, C. Jane and Kummer, U. (Ursula) (2008) Information transfer in signaling pathways : a study using coupled simulated and experimental data. BMC Bioinformatics, Vol.9 (No.13). doi:10.1186/1471-2105-9-139

Palani, Saravanan, Srinivasan, Rajagopalan, Zambon, Paola, Kamnev, Anton, Gayathri, Pananghat and Balasubramanian, Mohan K. (2018) Steric hindrance in the upper 50 kDa domain of the motor Myo2p leads to cytokinesis defects in fission yeast. Journal of Cell Science, 131 (1). jcs205625. doi:10.1242/jcs.205625

Panousopoulou, Eleni, Tyson, Richard A. (Richard Anthony), Bretschneider, Till and Green, Jeremy B.A. (2013) The distribution of Dishevelled in convergently extending mesoderm. Developmental Biology, Volume 382 (Number 2). pp. 496-503. doi:10.1016/j.ydbio.2013.07.012

Paradis-Bleau , Catherine, Lloyd, Adrian, Sanschagrin, François, Clark, Tom, Blewett, Ann, Bugg, Tim and Levesque, Roger C. (2008) Phage display-derived inhibitor of the essential cell wall biosynthesis enzyme MurF. BMC Biochemistry, Vol.9 (No.33). doi:10.1186/1471-2091-9-33

(2013) Carbohydrate utilization and metabolism is highly differentiated in Agaricus bisporus. BMC Genomics, Volume 14 (Number 1). Article number 663. doi:10.1186/1471-2164-14-663

Pearce, Daniel J. G. and Turner, Matthew S. (2015) Emergent behavioural phenotypes of swarming models revealed by mimicking a frustrated anti-ferromagnet. Journal of The Royal Society Interface, 12 (111). 20150520. doi:10.1098/rsif.2015.0520

Pearce, David A., Newsham, Kevin K., Thorne, Michael A. S., Calvo-Bado, Leo A., Krsek, Martin, Laskaris, Paris, Hodson, Andrew J. and Wellington, E. M. H. (2012) Metagenomic analysis of a southern maritime Antarctic soil. Frontiers in Microbiology, Volume 3 . Article number 403. doi:10.3389/fmicb.2012.00403

Peet, Daniel R., Burroughs, Nigel John and Cross, R. A. (2018) Kinesin expands and stabilizes the GDP-microtubule lattice. Nature Nanotechnology, 13 (5). pp. 386-391. doi:10.1038/s41565-018-0084-4

Penfold, Christopher A., Buchanan-Wollaston, Vicky, Denby, Katherine J. and Wild, David L. (2012) Nonparametric Bayesian inference for perturbed and orthologous gene regulatory networks. Bioinformatics, Vol.28 (No.12). i233-i241. doi:10.1093/bioinformatics/bts222

Penfold, Christopher A., Sybirna, Anastasiya, Reid, John E., Huang, Yun, Wernisch, Lorenz, Ghahramani, Zoubin, Grant, Murray R. and Surani, M. Azim (2018) Branch-recombinant Gaussian processes for analysis of perturbations in biological time series. Bioinformatics, 34 (17). i1005-i1013. doi:10.1093/bioinformatics/bty603

Piersma, Sjouke, Denham, Emma, Drulhe, Samuel, Tonk, Rudi H. J., Schwikowski, Benno and Dijl, Jan Maarten van (2013) TLM-Quant : an open-source pipeline for visualization and quantification of gene expression heterogeneity in growing microbial cells. PLoS One, Volume 8 (Number 7). Article number e68696. doi:10.1371/journal.pone.0068696

Piper, Jason, Elze, Markus C., Cauchy, Pierre, Cockerill, Peter N., Bonifer, Constanze and Ott, Sascha (2013) Wellington : a novel method for the accurate identification of digital genomic footprints from DNase-seq data. Nucleic Acids Research, Volume 41 (Number 21). Article number e201. doi:10.1093/nar/gkt850

Pontiroli, Alessandra, Khera, Tanya T., Oakley, Brian B., Mason, Sam, Dowd, Scot E., Travis, Emma Rachel, Erenso, Girum, Aseffa, Abraham, Courtenay, Orin and Wellington, E. M. H. (2013) Prospecting environmental mycobacteria: combined molecular approaches reveal unprecedented diversity. PLoS One, Volume 8 (Number 7). Article number e68648. doi:10.1371/journal.pone.0068648

Quan, Wen-Dong, Pitto-Barry, Anaïs, Baker, Lewis A., Stulz, Eugen, Napier, R. (Richard), O'Reilly, Rachel K. and Stavros, Vasilios G. (2015) Retaining individualities : the photodynamics of self-ordering porphyrin assemblies. Chemical Communications, 52 (9). pp. 1938-1941. doi:10.1039/c5cc09095d

Racys, Daurgidas Tomas, Rea, Dean, Fülöp, Vilmos and Wills, Martin (2010) Inhibition of prolyl oligopeptidase with a synthetic unnatural dipeptide. Bioorganic & Medicinal Chemistry, Vol.18 (No.13). pp. 4775-4782. doi:10.1016/j.bmc.2010.05.012

Rahmanpour, Rahman , Rea, Dean, Jamshidi, Shirin, Fülöp, Vilmos and Bugg, Tim (2016) Structure of thermobifida fusca DyP-type peroxidase and activity towards kraft lignin and lignin model compounds. Archives of Biochemistry and Biophysics, 594 . pp. 54-60. doi:10.1016/j.abb.2016.02.019

Remenyi, Judit, van den Bosch, Mirjam W. M., Palygin, Oleg, Mistry, Rajen B., McKenzie, Colin, Macdonald, Andrew, Hutvagner, Gyorgy, Arthur, J. Simon C., Frenguelli, Bruno G. and Pankratov, Yuriy (2013) miR-132/212 knockout mice reveal roles for these miRNAs in regulating cortical synaptic transmission and plasticity. PLoS One, Volume 8 (Number 4). Article number e62509. doi:10.1371/journal.pone.0062509

(2013) Tetrahydropyrazolo[1,5-a]Pyrimidine-3-Carboxamide and N-Benzyl-6′,7′-Dihydrospiro[Piperidine-4,4′-Thieno[3,2-c]Pyran] analogues with bactericidal efficacy against Mycobacterium tuberculosis targeting MmpL3. PLoS One, Volume 8 (Number 4). Article number e60933. doi:10.1371/journal.pone.0060933

Ruane, Karen M., Lloyd, Adrian J., Fülöp, Vilmos, Dowson, Christopher G., Barreteau, Hélène, Boniface, Audrey, Dementin, Sébastien, Blanot, Didier, Mengin-Lecreulx, Dominique, Gobec, Stanislav, Dessen, Andréa and Roper, David I. (2013) Specificity determinants for lysine incorporation in staphylococcus aureus peptidoglycan as revealed by the structure of a MurE enzyme ternary complex. Journal of Biological Chemistry, Volume 288 (Number 46). Article number 33439. doi:10.1074/jbc.M113.508135

Russell, Claire L., Smith, Edward M., Calvo-Bado, Leo A., Green, Laura E., Wellington, E. M. H., Medley, Graham, Moore, Lynda J. and Grogono-Thomas, Rosemary (2014) Multiple locus VNTR analysis highlights that geographical clustering and distribution of Dichelobacter nodosus, the causal agent of footrot in sheep, correlates with inter-country movements. Infection, Genetics and Evolution , Volume 22 (Number 1). pp. 273-279. doi:10.1016/j.meegid.2013.05.026

Sampath, Karuna and Robertson, Elizabeth J. (2016) Keeping a lid on nodal : transcriptional and translational repression of nodal signalling. Open Biology, 6 (1). 150200. doi:10.1098/rsob.150200

Sarkar, Sourav, Shenoy, Rajesh T., Dalgaard, Jacob Z., Newnham, Louise, Hoffmann, Eva, Millar, Jonathan B. A. and Arumugam, Prakash (2013) Monopolin subunit Csm1 associates with MIND complex to establish monopolar attachment of sister kinetochores at meiosis I. PLoS Genetics, Volume 9 (Number 7). Article number e1003610. doi:10.1371/journal.pgen.1003610

Saslis-Lagoudakis, C. Haris and Clarke, Andrew C. (2013) Ethnobiology : the missing link in ecology and evolution. Trends in Ecology & Evolution, Volume 28 (Number 2). pp. 67-68. doi:10.1016/j.tree.2012.10.017

Sayrac, Suha, Vengrova, Sonya, Godfrey, Emma L. and Dalgaard, Jacob Z. (2011) Identification of a novel type of spacer element required for imprinting in fission yeast. PLoS Genetics, Vol.7 (No.3). e1001328. doi:10.1371/journal.pgen.1001328

Schweiger, W. (Wolfgang), Steiner, B. (Barbara), Ametz, Christian, Siegwart, Gerald, Wiesenberger, Gerlinde, Berthiller, Franz, Lemmens, Marc, Jia, Haiyan, Adam, G. (Gerhard), Muehlbauer, Gary J., Kreil, David and Buerstmayr, Hermann (2013) Transcriptomic characterization of two major Fusarium resistance quantitative trait loci (QTLs), Fhb1 and Qfhs.ifa-5A, identifies novel candidate genes. Molecular Plant Pathology, Volume 14 (Number 8). pp. 772-785. doi:10.1111/mpp.12048

Sgamma, Tiziana, Jackson, Alison C., Muleo, Rosario, Thomas, Brian and Massiah, Andrea J. (2014) TEMPRANILLO is a regulator of juvenility in plants. Scientific Reports, Volume 4 . Article number 3704. doi:10.1038/srep03704

Shah, Kunal M., Webber, Jason, Dr., Carzaniga, Raffaella, Taylor, Deborah M., Fusi, Luca, Clayton, Aled, Brosens, Jan J., Hartshorne, Geraldine M. and Christian, Mark (2013) Induction of microRNA resistance and secretion in differentiating human endometrial stromal cells. Journal of Molecular Cell Biology, Volume 5 (Number 1). pp. 67-70. doi:10.1093/jmcb/mjs058

Sheldon, Rachel E., Baghdadi, Marc, McCloskey, Conor, Blanks, Andrew M., Shmygol, Anatoly and Berg, Hugo van den (2013) Spatial heterogeneity enhances and modulates excitability in a mathematical model of the myometrium. Journal of The Royal Society Interface, Volume 10 (Number 86). p. 20130458. doi:10.1098/rsif.2013.0458

Shimanovich, U., Pinotsi, D., Shimanovich, K., Yu, N., Bolisetty, S., Adamcik, J., Mezzenga, R., Charmet, Jérôme, Vollrath, F., Gazit, E., Dobson, C. M., Kaminski Schierle, G., Holland, C., Kaminski, C. F. and Knowles, T. P. J. (2018) Biophotonics of native silk fibrils. Macromolecular Bioscience, 18 (4). 1700295. doi:10.1002/mabi.201700295

Siamantouras, Eleftherios, Hills, Claire E., Squires, Paul E. and Liu, Kuo-Kang (2015) Nanomechanical investigation of soft biological cell adhesion using atomic force microscopy. Cellular and Molecular Bioengineering, Volume 8 (Number 1). pp. 22-31. doi:10.1007/s12195-014-0359-2

Sidda, John D., Song, Lijiang, Poon, Vincent, Al-Bassam, Mahmoud, Lazos, Orestis, Buttner, Mark J., Challis, Gregory L. and Corre, Christophe (2014) Discovery of a family of γ-aminobutyrate ureas via rational derepression of a silent bacterial gene cluster. Chemical Science, Volume 5 . pp. 86-89. doi:10.1039/c3sc52536h

Simpson, Daniel H., Hapeshi, Alexia, Rogers, Nicola J., Brabec, Viktor, Clarkson, Guy J., Fox, David J., Hrabina, Ondrej, Kay, Gemma L., King, Andrew, Malina, Jaroslav, Millard, Andrew D., Moat, John, Roper, David I., Song, Hualong, Waterfield, Nicholas R. and Scott, Peter (2019) Metallohelices that kill Gram-negative pathogens using intracellular antimicrobial peptide pathways. Chemical Science . doi:10.1039/C9SC03532J (In Press)

Sims, Robert E. and Dale, Nicholas (2014) Activity-dependent adenosine release may be linked to activation of Na+-K+ ATPase : an in vitro rat study. PLoS One, Volume 9 (Number 1). Article number e87481. doi:10.1371/journal.pone.0087481

(2013) A model of yeast glycolysis based on a consistent kinetic characterisation of all its enzymes. FEBS Letters, Volume 587 (Number 17). pp. 2832-2841. doi:10.1016/j.febslet.2013.06.043

Smith, Claire M., Djakow, Jana, Free, Robert C., Djakow, Petr, Lonnen, Rana, Williams, Gwyneth, Pohunek, Petr, Hirst, Robert A., Easton, A. J. (Andrew J.), Andrew, Peter W. and O’Callaghan, Christopher (2012) ciliaFA : a research tool for automated, high-throughput measurement of ciliary beat frequency using freely available software. Cilia, Volume 1 (Number 1). Article no. 14. doi:10.1186/2046-2530-1-14

Smith, Oliver , Clapham, Alan J., Rose, Pam, Liu, Yuan, Wang, Jun and Allaby, Robin G. (2014) A complete ancient RNA genome : identification, reconstruction and evolutionary history of archaeological Barley Stripe Mosaic Virus. Scientific Reports, Volume 4 . Article number 4003. doi:10.1038/srep04003

Snyder, Lori A. S., Loman, Nicholas J., Linton, James D., Langdon, Rebecca R., Weinstock, George M., Wren, Brendan and Pallen, Mark J. (2010) Simple sequence repeats in Helicobacter canadensis and their role in phase variable expression and C-terminal sequence switching. BMC Genomics, Volume 11 (Number 1). Article number 67. doi:10.1186/1471-2164-11-67

Soldevila-Barreda, Joan J., Habtemariam, Abraha, Romero-Canelón, Isolda and Sadler, P, J. (2015) Half-sandwich rhodium(III) transfer hydrogenation catalysts : reduction of NAD+ and pyruvate, and antiproliferative activity. Journal of Inorganic Biochemistry, 153 . pp. 322-333. doi:10.1016/j.jinorgbio.2015.10.008

Sosso, Gabriele C., Whale, Thomas Francis, Holden, Mark Andrew, Pedevilla, Philipp, Murray, Benjamin John and Michaelides, Angelos (2018) Unravelling the origins of ice nucleation on organic crystals. Chemical Science . doi:10.1039/C8SC02753F (In Press)

Soyer, Orkun S. and Pfeiffer, Thomas (2010) Evolution under fluctuating environments explains observed robustness in metabolic networks. PLoS Computational Biology, Volume 6 (Number 8). Article no. e1000907. doi:10.1371/journal.pcbi.1000907

Sperati, Francesca, Vici, Patrizia, Maugeri-Saccà, Marcello, Stranges, Saverio, Santesso, Nancy, Mariani, Luciano, Giordano, Antonio, MD, Sergi, Domenico, Pizzuti, Laura, Di Lauro, Luigi, Montella, Maurizio, Crispo, Anna, Mottolese, Marcella and Barba, Maddalena (2013) Vitamin D supplementation and breast cancer prevention : a systematic review and meta-analysis of randomized clinical trials. PLoS One, Volume 8 (Number 7). Article number e69269. doi:10.1371/journal.pone.0069269

Spooner, Robert A., Harte, Philip J. , Cook, Jonathan P., Pietroni, Paola, Rogon, Christian, Höhfeld, Jörg, Roberts, L. M. (Lynne M.) and Lord, Mike (2008) Cytosolic chaperones influence the fate of a toxin dislocated from the endoplasmic reticulum. Proceedings of the National Academy of Sciences of the United States of America, Vol.105 (No.45). pp. 17408-17413. doi:10.1073/pnas.0809013105

Spooner, Robert A., Watson, Peter, Smith, Daniel C., Boal, Frédéric, Amessou, Mohammed, Mohammed, Ludger, Clarkson, Guy J., Lord, Mike, Stephens, David J. and Roberts, L. M. (Lynne M.) (2008) The secretion inhibitor Exo2 perturbs trafficking of Shiga toxin between endosomes and the trans-Golgi network. Biochemical Journal, Vol.414 (No.3). pp. 471-484. doi:10.1042/BJ20080149

Spooner, Robert A. , Smith, Daniel C., Easton, A. J. (Andrew J.), Roberts, L. M. (Lynne M.) and Lord, Mike (2006) Retrograde transport pathways utilised by viruses and protein toxins. Virology Journal, Vol.3 . p. 26. doi:10.1186/1743-422X-3-26

Stegle, Oliver, Denby, Katherine J., Cooke, Emma J., Wild, David L., Ghahramani, Zoubin and Borgwardt, Karsten M. (2010) A robust Bayesian two-sample test for detecting intervals of differential gene expression in microarray time series. Journal of Computational Biology , Volume 17 (Number 3). pp. 355-367. doi:10.1089/cmb.2009.0175

Storey, Alice A., Clarke, Andrew C., Ladefoged, Thegn N., Robins, J. (Judith) and Matisoo-Smith, Lisa (2013) DNA and pacific commensal models : applications, construction, limitations, and future prospects. The Journal of Island and Coastal Archaeology, Volume 8 (Number 1). pp. 37-65. doi:10.1080/15564894.2012.761299

Szeltner, Zoltán, Juhász, Tünde, Szamosi, Ilona, Rea, Dean, Fülöp, Vilmos, Módos, Károly, Juliano, Luiz and Polgár, László (2013) The loops facing the active site of prolyl oligopeptidase are crucial components in substrate gating and specificity. Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, Vol.1834 (No.1). pp. 98-111. doi:10.1016/j.bbapap.2012.08.012

Szomolay, Barbara, Liu, Jie, Brown, Paul E., Miles, John J., Clement, Mathew, Llewellyn-Lacey, Sian, Dolton, Garry, Ekeruche-Makinde, Julia, Lissina, Anya, Schauenburg, Andrea J., Sewell, Andrew K., Burrows, Scott R., Roederer, Mario, Price, David A., Wooldridge, Linda and Berg, Hugo van den (2016) Identification of human viral protein-derived ligands recognized by individual MHCI-restricted T-cell receptors. Immunology and Cell Biology, 94 . pp. 573-582. doi:10.1038/icb.2016.12

Takahashi, Y. (Yasufumi), Shevchuk, Andrew I., Novak, P. (Pavel), Zhang, Yanjun, Ebejer, Neil, Macpherson, Julie V., Unwin, Patrick R., Pollard, Andrew J., Roy, Debdulal, Clifford, Charles Alexander, Shiku, Hitoshi, Matsue, Tomokazu, Klenerman, David and Korchev, Yuri E. (2011) Multifunctional nanoprobes for nanoscale chemical imaging and localized chemical delivery at surfaces and interfaces. Angewandte Chemie (International Edition), Volume 50 (Number 41). pp. 9638-9642. doi:10.1002/anie.201102796

Tang, Shangming, Copsey, Alice, Jordan, Philip W., Blitzblau, Hannah G., Newcombe, Sonya, Chan, Andrew Chi-ho, Newnham, Louise, Li, Zhaobo, Gray, Stephen, Herbert, Alex D., Arumugam, Prakash , Hochwagen, Andreas, Hunter, Neil and Hoffmann, Eva (2013) Smc5/6 coordinates formation and resolution of joint molecules with chromosome morphology to ensure meiotic divisions. PLoS Genetics, Volume 9 (Number 12). Article number e1004071. doi:10.1371/journal.pgen.1004071

Taubert, Martin, Grob, Carolina, Crombie, Andrew, Howat, Alexandra M., Burns, Oliver J., Weber, Miriam, Lott, Christian, Kaster, Anne‐Kristin, Vollmers, John, Jehmlich, Nico, Bergen, Martin, Chen, Yin and Murrell, J. Colin (2019) Communal metabolism by Methylococcaceae and Methylophilaceae is driving rapid aerobic methane oxidation in sediments of a shallow seep near Elba, Italy. Environmental Microbiology . doi:10.1111/1462-2920.14728 (In Press)

Taubert, Martin, Grob, Carolina, Howat, Alexandra M., Burns, Oliver J., Pratscher, Jennifer, Jehmlich, Nico, von Bergen, Martin, Richnow, Hans H., Chen, Yin and Murrell, J. C. (J. Colin) (2017) Methylamine as a nitrogen source for microorganisms from a coastal marine environment. Environmental Microbiology, 19 (6). pp. 2246-2257. doi:10.1111/1462-2920.13709

Tesfaye, Mesfin, Silverstein, Kevin AT., Nallu, Sumitha, Wang, Lin, Botanga, Christopher J., Gomez, S. Karen, Costa, Liliana M., Harrison, Maria J., Samac, Deborah A., Glazebrook, Jane, Katagiri, Fumiaki, Gutierrez-Marcos, José F. and VandenBosch, Kathryn A. (2013) Spatio-temporal expression patterns of Arabidopsis thaliana and Medicago truncatula defensin-like genes. PLoS One, Volume 8 (Number 3). Article no. e58992. doi:10.1371/journal.pone.0058992

Theisen, Ulrike, Straube, Anne and Steinberg, Gero (2008) Dynamic rearrangement of nucleoporins during fungal "open" mitosis. Molecular Biology of the Cell, Volume 19 (Number 3). pp. 1230-1240. doi:10.1091/mbc.E07-02-0130

Tildesley, Michael J., Deardon, Rob, Savill, Nicholas J., Bessell, Paul R., Brooks, Stephen P., Woolhouse, Mark E. J., Grenfell, Bryan T. and Keeling, Matthew James (2008) Accuracy of models for the 2001 foot-and-mouth epidemic. Proceedings of the Royal Society B. Biological Sciences , Vol.275 (No.1641). pp. 1459-1468. doi:10.1098/rspb.2008.0006

Timofeeva, Yulia, Coombes, Stephen and Michieletto, Davide (2013) Gap junctions, dendrites and resonances : a recipe for tuning network dynamics. The Journal of Mathematical Neuroscience, Volume 3 (Number 1). Article number 15. doi:10.1186/2190-8567-3-15

Tindjong, Rodrigue, Kaufman, Igor, Luchinsky, Dmittri G., McClintock, P. V. E., Khovanov, I. A. and Eisenberg, Robert S. (2013) Self-organized enhancement of conductivity in biological ion channels. New Journal of Physics, Volume 15 (Number 10). Article number 103005. doi:10.1088/1367-2630/15/10/103005

Todorova, Nevena, Makarucha, Adam J., Hine, Nicholas, Mostofi, Arash A. and Yarovsky, Irene (2013) Dimensionality of carbon nanomaterials determines the binding and dynamics of amyloidogenic peptides : multiscale theoretical simulations. PLoS Computational Biology, 9 (12). e1003360. doi:10.1371/journal.pcbi.1003360

Tolley, Nicholas, Sparkes, Imogen, Craddock, Christian P., Eastmond, Peter J., Runions, John, Hawes, C. R. and Frigerio, Lorenzo (2010) Transmembrane domain length is responsible for the ability of a plant reticulon to shape endoplasmic reticulum tubules in vivo. Plant Journal, Volume 64 (Number 3). pp. 411-418. doi:10.1111/j.1365-313X.2010.04337.x

Traka, Maria H., Saha, Shikha, Huseby, Stine, Kopriva, Stanislav, Walley, Peter Glen, Barker, Guy C., Moore, Jonathan D., Mero, Gene, van den Bosch, Frans, Constant, Howard, Kelly, Leo, Schepers, Hans, Boddupalli, Sekhar and Mithen, Richard F. (2013) Genetic regulation of glucoraphanin accumulation in Beneforté® broccoli. New Phytologist, Volume 198 (Number 4). pp. 1085-1095. doi:10.1111/nph.12232

Turner, Matthew S. , Agarwal, G., Jones, C. W., Wang, J. C., Kwong, S., Ferrone, F. A., Josephs, R. and Briehl, R. W. (2006) Fiber depolymerization. Biophysical Journal, Vol.91 (No.3). pp. 1008-1013. doi:10.1529/biophysj.105.075333

Vale, Glyn A., Hargrove, John W., Chamisa, Andrew, Hall, D. R. , Mangwiro, Clement and Torr, Stephen J. (2013) Factors affecting the propensity of tsetse flies to enter houses and attack humans inside : increased risk of sleeping sickness in warmer climates. PLoS Neglected Tropical Diseases, Volume 7 (Number 4). Article number e2193. doi:10.1371/journal.pntd.0002193

Vanoosthuyse, Vincent, Meadows, John C., van der Sar, Sjaak J. A., Millar, Jonathan B. A. and Hardwick, Kevin G. (2009) Bub3p facilitates spindle checkpoint silencing in fission yeast. Molecular Biology of the Cell, Vol.20 (No.24). pp. 5096-5105. doi:10.1091/mbc.E09-09-0762

Vlisidou, Isabella, Dowling, Andrea J., Evans, Iwan R., Waterfield, Nicholas R., ffrench-Constant, Richard H. and Wood, W. (Will) (2009) Drosophila embryos as model systems for monitoring bacterial infection in real time. PLoS Pathogens, Volume 5 (Number 7). Article number e1000518. doi:10.1371/journal.ppat.1000518

Vlisidou, Isabella, Hapeshi, Alexia, Healey, Joseph, Smart, Katie, Yang, Guowei and Waterfield, Nicholas R. (2019) The PVC element of Photorhabdus asymbiotica virulence cassettes deliver protein effectors directly into target eukaryotic cells. eLife, 8 . e46259.. doi:10.7554/eLife.46259

Vohra, Shabana, Taddese, Bruck, Conner, Alex C., Poyner, David, Hay, Debbie L., Barwell, James, Reeves, Philip J., Upton, Graham J. G. and Reynolds, Christopher A. (2012) Similarity between class A and class B G-protein-coupled receptors exemplified through calcitonin gene-related peptide receptor modelling and mutagenesis studies. Journal of The Royal Society Interface, Volume 10 (Number 79). Article no. 20120846. doi:10.1098/rsif.2012.0846

Vázquez-Novelle, María Dolores, Sansregret, Laurent, Dick, Amalie E., Smith, Christopher A., McAinsh, Andrew D., Gerlich, Daniel W. and Petronczki, Mark (2014) Cdk1 inactivation terminates mitotic checkpoint surveillance and stabilizes kinetochore attachments in anaphase. Current Biology, Volume 24 (Number 6). pp. 638-645. doi:10.1016/j.cub.2014.01.034

Wall, Mark J. and Corrêa, Sônia A. L. (2018) The mechanistic link between Arc/Arg3.1 expression and AMPA receptor endocytosis. Seminars in Cell and Developmental Biology, 77 . pp. 17-24. doi:10.1016/j.semcdb.2017.09.005

Wan, Qingwen, Okashah, Najeah, Inoue, Asuka, Nehmé, Rony, Carpenter, Byron, Tate, Christopher G. and Lambert, Nevin A. (2018) Mini G protein probes for active G protein– coupled receptors (GPCRs) in live cells. Journal of Biological Chemistry, 293 . pp. 7466-7473. doi:10.1074/jbc.RA118.001975

Wedagedera, J. R. and Burroughs, Nigel John (2006) T-Cell activation: a queuing theory analysis at low agonist density. Biophysical Journal, Vol.91 (No.5). pp. 1604-1618. doi:10.1529/biophysj.105.066001

Weis, Corina, Huckelhoven, Ralph and Eichmann, Ruth (2013) LIFEGUARD proteins support plant colonization by biotrophic powdery mildew fungi. Journal of Experimental Botany, Volume 64 (Number 12). pp. 3855-3867. doi:10.1093/jxb/ert217

Wells, Stephen A., Jiménez Roldán, J. E. (José Emilio) and Roemer, Rudolf A. (2009) Comparative analysis of rigidity across protein families. Physical Biology, Vol.6 (No.4). Article 6005. doi:10.1088/1478-3975/6/4/046005

Wentzel, Alexander, Bruheim, Per, Øverby, Anders, Jakobsen, Øyvind M, Sletta, Håvard, Omara, Walid A. M., Hodgson, D. A. and Ellingsen, Trond E. (2012) Optimized submerged batch fermentation strategy for systems scale studies of metabolic switching in Streptomyces coelicolor A3(2). BMC Systems Biology, Volume 6 . Article number 59. doi:10.1186/1752-0509-6-59

Weston, Cathryn, Bond, Michael, Croft, Wayne D. and Ladds, Graham (2013) The coordination of cell growth during fission yeast mating requires Ras1-GTP hydrolysis. PLoS One, Volume 8 (Number 10). e77487. doi:10.1371/journal.pone.0077487

Wibowo, Anjar, Becker, Claude, Durr, Julius, Price, Jonathan, Spaepen, Stijn, Hilton, Sally, Putra, Hadi, Papareddy, Ranjith, Saintain, Quentin, Harvey, Sarah, Bending, G. D., Schulze-Lefert, Paul, Weigel, Detlef and Gutierrez-Marcos, José F. (2018) Partial maintenance of organ-specific epigenetic marks during plant asexual reproduction leads to heritable phenotypic variation. Proceedings of the National Academy of Sciences of the United States of America, 115 (39). E9145-E9152. doi:10.1073/pnas.1805371115

Williams, Tiffany M., Loman, Nicholas J., Ebruke, Chinelo, Musher, Daniel M., Adegbola, Richard A., Pallen, Mark J., Weinstock, George M. and Antonio, Martin (2012) Genome analysis of a highly virulent serotype 1 strain of streptococcus pneumoniae from West Africa. PLoS One, Volume 7 (Number 10). Article number e26742. doi:10.1371/journal.pone.0026742

Wood, Laura A., Larocque, Gabrielle, Clarke, Nicholas I., Sarkar, Sourav and Royle, Stephen J. (2017) New tools for “hot-wiring” clathrin-mediated endocytosis with temporal and spatial precision. The Journal of Cell Biology, 216 (12). 4351. doi:10.1083/jcb.201702188

Woodcock, Dan J., Vance, Keith W., Komorowski, Michal, Koentges, Georgy, Finkenstädt, Bärbel and Rand, D. A. (David A.) (2013) A hierarchical model of transcriptional dynamics allows robust estimation of transcription rates in populations of single cells with variable gene copy number. Bioinformatics, Volume 29 (Number 12). pp. 1519-1525. doi:10.1093/bioinformatics/btt201

Woolley, Michael J., Watkins, Harriet A., Taddese, Bruck, Karakullukcu, Z. Gamze, Barwell, James, Smith, Kevin J., Hay, Debbie L., Poyner, David, Reynolds, Christopher A. and Conner, Alex C. (2013) The role of ECL2 in CGRP receptor activation : a combined modelling and experimental approach. Journal of The Royal Society Interface, Volume 10 (Number 88). p. 20130589. doi:10.1098/rsif.2013.0589

(2016) MUFINS : multi-formalism interaction network simulator. npj Systems Biology and Applications, 2 . 16032. doi:10.1038/npjsba.2016.32

Yang, Bu, Peng, Guangda, Li, Tianbang and Kadowaki, Tatsuhiko (2013) Molecular and phylogenetic characterization of honey bee viruses, Nosema microsporidia, protozoan parasites, and parasitic mites in China. Ecology and Evolution, Volume 3 (Number 2). pp. 298-311. doi:10.1002/ece3.464

Yang, Guowei and Waterfield, Nicholas R. (2013) The role of TcdB and TccC subunits in secretion of the photorhabdus Tcd toxin complex. PLoS Pathogens, Volume 9 (Number 10). Article number e1003644. doi:10.1371/journal.ppat.1003644

Yao, Y., Lu, W. L., Xu, B., Li, C. B., Lin, C. P., Waxman, D. (David) and Feng, Jianfeng (2013) The increase of the functional entropy of the human brain with age. Scientific Reports, Volume 3 . Article number 2853. doi:10.1038/srep02853

Zhou, Zhemin, McCann, Angela, Litrup, Eva, Murphy, Ronan, Cormican, Martin, Fanning, Seamus, Brown, Derek, Guttman, David S., Brisse, Sylvain and Achtman, Mark (2013) Neutral genomic microevolution of a recently emerged pathogen, salmonella enterica serovar agona. PLoS Genetics, 9 (4). e1003471. doi:10.1371/journal.pgen.1003471

Zou, Cunlu, Denby, Katherine J. and Feng, Jianfeng (2009) Granger causality vs. dynamic Bayesian network inference: a comparative study. BMC Bioinformatics, Vol.10 . Article number 122. doi:10.1186/1471-2105-10-122

Zou, Cunlu, Ladroue, Christophe, Guo, Shuixia and Feng, Jianfeng (2010) Identifying interactions in the time and frequency domains in local and global networks : a Granger causality approach. BMC Bioinformatics, Vol.11 . Article 337. doi:10.1186/1471-2105-11-337

van der Ploeg, René, Mäder, Ulrike, Homuth, Georg, Schaffer, Marc, Denham, Emma, Monteferrante, Carmine G., Miethke, Marcus, Marahiel, Mohamed A., Harwood, Colin R., Winter, Theresa, Hecker, Michael, Antelmann, Haike and Dijl, Jan Maarten van (2011) Environmental salinity determines the specificity and need for tat-dependent secretion of the YwbN protein in bacillus subtilis. PLoS One, Volume 6 (Number 3). Article number e18140. doi:10.1371/journal.pone.0018140

Book Item

Valdes-Amaro, Daniel and Bhalerao, Abhir (2009) Unsupervised clustering using diffusion maps for local shape modelling. In: Moreno-Díaz, Roberto and Pichler, Franz, 1936- and Quesada-Arencibia, Alexis, (eds.) Computer Aided Systems Theory : EUROCAST 2009. Lecture Notes in Computer Science, Volume 5717 . Springer Berlin Heidelberg, pp. 342-349. ISBN 9783642047718

Conference Item

Langenkämper, Daniel, Kölling, Jan, Abouna, Sylvie, Khan, Michael, Niehaus, Karsten and Nattkemper, Tim W. (2011) TICAL - a web-tool for multivariate image clustering and data topology preserving visualization. In: MIAAB 2011 (Microscopic Image Analysis with Applications in Biology), Heidelberg, Germany, 2 Sep 2011. Published in: Proceedings of the 2011 Microscopic Image Analysis with Applications in Biology pp. 1-5.

Sanassy, Daven, Fellermann, Harold, Krasnogor, Natalio, Konur, Savas, Mierla, Laurentiu M., Gheorghe, Marian, Ladroue, Christophe and Kalvala, Sara (2014) Modelling and stochastic simulation of synthetic biological Boolean gates. In: 2014 IEEE International Conference on High Performance Computing and Communications, 2014 IEEE 6th Intl Symp on Cyberspace Safety and Security, 2014 IEEE 11th Intl Conf on Embedded Software and Syst (HPCC,CSS,ICESS), Paris, 20-22 Aug 2014. Published in: High Performance Computing and Communications, 2014 IEEE 6th Intl Symp on Cyberspace Safety and Security, 2014 IEEE 11th Intl Conf on Embedded Software and Syst (HPCC,CSS,ICESS) pp. 404-408. ISBN 9781479961221. doi:10.1109/HPCC.2014.68

Tindjong, Rodrigue, Kaufman, Igor, Luchinsky, Dmitrii G., McClintock, P. V. E., Khovanov, I. A. and Eisenberg, Robert S. (2013) Stochastic dynamics of remote knock-on permeation in biological ion channels. In: 22nd International Conference on Noise and Fluctuations (ICNF), Montpellier, France, 24-28 June 2013. Published in: Noise and Fluctuations (ICNF), 2013 22nd International Conference on pp. 1-4. ISBN 978-1-4799-0668-0. doi:10.1109/ICNF.2013.6578893

Journal Item

Arasaradnam, Ramesh P. and Nwokolo, Chuka U. (2012) Epiphenomenon of telomere lengths : lessons from ulcerative colitis. Gut, Vol.61 (No.10). p. 1516. doi:10.1136/gutjnl-2012-302102

Liu, Kuo-Kang, Wu, Ren-Guei, Chuang, Yun-Ju, Khoo, Hwa Seng, Huang, Shih-Hao and Tseng, Fan-Gang (2010) Microfluidic systems for biosensing. Sensors, Vol.10 (No.7). pp. 6623-6661. doi:10.3390/s100706623

Nezis, I. P., Vaccaro, Maria I., Devenish, Rodney J. and Juhász, Gábor (2014) Autophagy in development, cell differentiation, and homeodynamics: from molecular mechanisms to diseases and pathophysiology. BioMed Research International, Volume 2014 . pp. 1-2. Article number 349623. doi:10.1155/2014/349623

Submitted Journal Article

(2010) The Scottish Structural Proteomics Facility : targets, methods and outputs. Journal of Structural and Functional Genomics, Vol.11 (No.2). pp. 167-180. doi:10.1007/s10969-010-9090-y

Report

Craig, Iain D. and Wilson, David H. (1987) CONFER : a knowledge system for bio-process control. University of Warwick. Department of Computer Science. (Department of Computer Science research report). (Unpublished)

Thesis or Dissertation

Ahmed, Usman (2013) Protein damage markers in diagnosis, progression and treatment of arthritis. PhD thesis, University of Warwick.

Arifin, Khaizurin T. (2013) Creating an orthogonal signalling pathway in S. cerevisiae. PhD thesis, University of Warwick.

Arnab, Sylvester (2009) Soft volume simulation using a deformable surface model. PhD thesis, University of Warwick.

Auckland, Philip (2016) Molecular analysis of chromosome movement by microtubule depolymerisation-coupled pulling. PhD thesis, University of Warwick.

Baird, Mark E. (1999) Towards a verified mechanistic model of plankton population dynamics. PhD thesis, University of Warwick.

Baker, Paul (Researcher in biological sciences) (1997) The distribution and diversity of actinomycetes in soil fractions. PhD thesis, University of Warwick.

Barker, Zoe Elizabeth (2007) Epidemiology of lameness in dairy cows. PhD thesis, University of Warwick.

Barr, John Nicholas (1993) Expression of the nucleoprotein and phosphoprotein genes of pneumonia virus of mice and specific interactions of the gene products. PhD thesis, University of Warwick.

Basu, Balaka Piku (2000) The particulate methane monooxygenase from Methylococcus capsulatus (Bath). PhD thesis, University of Warwick.

Bickerton, Erica Jane (2010) Cellular tropism and cell-to-cell fusion properties of the infectious bronchitis virus spike glycoprotein. PhD thesis, University of Warwick.

Bouchekhima, Abdnacer (2009) Quantification of the plant endoplasmic reticulum. PhD thesis, University of Warwick.

Bowyer, Jack E. (2018) Mechanistic mathematical models for the design of synthetic biological systems : DNA recombination, recombinase-based temporal logic gates and antibiotic production. PhD thesis, University of Warwick.

Brown, Richard Henry (1969) A study of the cell envelope of Halobacterium salinarium. PhD thesis, University of Warwick.

Callaghan, Anastasia J. (2000) The regulatory protein and component interactions of soluble methane monooxygenase. PhD thesis, University of Warwick.

Carvalho, Maria Suzana Balparda de (1983) Dynamical systems and games theory. PhD thesis, University of Warwick.

Christian, Nigel David (2007) From biopiracy to bioprospecting: an historical sociology of the search for biological resources. PhD thesis, University of Warwick.

Clarke, Ian Nicholas (1982) Genomic variation in rotaviruses. PhD thesis, University of Warwick.

Clarke, Nicholas I. (2018) Development of a new genetically-encoded tag for correlative light electron microscopy. PhD thesis, University of Warwick.

Collier, Sharon (2017) Image based modelling of bleb site selection. PhD thesis, University of Warwick.

Conder, Michael John (1984) Origin of glyoxysomal membrane proteins in castor bean endosperm. PhD thesis, University of Warwick.

Cotton-Barratt, Rebecca (2013) Modelling biological form in evolution. PhD thesis, University of Warwick.

Cutler, Daniel Franklin (1982) The secretion of chick proteins from Xenopus oocytes : an investigation into non-parallel secretion. PhD thesis, University of Warwick.

Das Choudhury, Sruti (2013) Uniscale and multiscale gait recognition in realistic scenario. PhD thesis, University of Warwick.

Davies, Siân Elizabeth Wynne (2013) Transcription factor interactions at the promoter of the Arabidopsis circadian clock gene LHY. PhD thesis, University of Warwick.

Di Maiuta, Nicola (2010) Characterisation of mixed microbial populations in white mineral dispersions. PhD thesis, University of Warwick.

Downey, Mike J. (2012) Extracting fluorescent reporter time courses of cell lineages from high-throughput microscopy at low temporal resolution. PhD thesis, University of Warwick.

Du Lac, Melchior (2017) Modelling and simulation of heterogeneous growth dynamics in bacterial populations using a novel multiphasic growth method. PhD thesis, University of Warwick.

Esparza Franco, Manuel A. (2016) A systems biology analysis of feedback control in pheromone signalling of fission yeast. PhD thesis, University of Warwick.

Essa, Sahar Sultan (2001) A study on the cell mediated immunity of human cytomegalovirus infection in kidney transplant recipients. PhD thesis, University of Warwick.

Feng, Song (2015) Exploring design principles of cellular information processing. PhD thesis, University of Warwick.

Fitton, Ben (2016) A study of the interaction of end-binding proteins with microtubules. PhD thesis, University of Warwick.

Hall, Vincent Austin (2014) Self organising map machine learning approach to pattern recognition for protein secondary structures and robotic limb control. PhD thesis, University of Warwick.

Hilton, Gillian R. (2009) Mass spectrometry-based studies of synthetic and natural macromolecules. PhD thesis, University of Warwick.

Holness, Claire Louise Lesley (1989) Isolation and characterisation of mutants of cowpea mosaic virus. PhD thesis, University of Warwick.

Jiménez Roldán, J. E. (José Emilio) (2012) Rigidity analysis of protein structures and rapid simulations of protein motion. PhD thesis, University of Warwick.

Jones, Ian Martin (1984) Plasmid segregational stability in 'Escherichia coli'. PhD thesis, University of Warwick.

Kerr, Gary W. (2013) The role of protein phosphatase PP2ACdc55 during meiosis in Saccharomyces cerevisiae. PhD thesis, University of Warwick.

Kowalczyk, Agnieszka (2013) Role of microbial adaptation in the biodegradation of chemical pollutants : extrapolation from laboratory to rivers. PhD thesis, University of Warwick.

Lal, Suchita K. (2013) The role of corticotropin-releasing hormone (CRH) in cellular models of breast cancer. PhD thesis, University of Warwick.

Langmead, Olivia (2002) Coral community dynamics and disturbances : a modelling approach for Caribbean coral reefs. PhD thesis, University of Warwick.

Ling, Roger (1988) Polypeptides of murine and avian pneumoviruses. PhD thesis, University of Warwick.

Lloyd, John S. (1997) Heterologous expression and site-directed mutagenesis of soluble methane monoxygenase. PhD thesis, University of Warwick.

Locke, James C. W. (2006) A systems biology approach to the Arabidopsis circadian clock. PhD thesis, University of Warwick.

Lockley, Robert (2015) Image-based modelling of cell reorientation. PhD thesis, University of Warwick.

Lowe, Lawrence (1976) An investigation into the applications of real-time computing techniques in industrial audiometry. PhD thesis, University of Warwick.

Luo, Jamie X. (2012) Functionality and sensing in Boolean networks. PhD thesis, University of Warwick.

McKelvey, Kim M. (Kim Martin) (2012) New approaches and applications in electrochemical scanning probe microscopy. PhD thesis, University of Warwick.

Meadows, Katherine E. (2013) New approaches to the study of biophysicochemical processes. PhD thesis, University of Warwick.

Messin, Liam J. (2017) Spatial control of microtubule shrinkage. PhD thesis, University of Warwick.

Morris, Andrew John (1997) Representing spatial interactions in simple ecological models. PhD thesis, University of Warwick.

Morris, Nathan (Nathan Z.) (2000) Molecular detection of type II polyketide synthase genes in Cuban soils. PhD thesis, University of Warwick.

Mulakkal, Nitha Charles (2016) Molecular mechanisms of selective autophagy in Drosophila melanogaster. PhD thesis, University of Warwick.

Naylor, Richard William (2009) An investigation into how the cell cycle and the Notch signalling pathway regulate pronephrogenesis in Xenopus laevis. PhD thesis, University of Warwick.

Nelis, Stuart (2014) An investigation into the role and mechanism of action of small ubiquitin-like modifier interacting motifs in Arabidopsis thaliana proteins. PhD thesis, University of Warwick.

Page, Ashley M. (2017) Multifunctional scanning ion conductance microscopy. PhD thesis, University of Warwick.

Patel, Vibhuti J. (2009) Novel mass spectrometry-based approaches for the characterisation of systems of biological interest. PhD thesis, University of Warwick.

Peet, Daniel R. (2015) Mechanical inhibition of microtubule depolymerisation by kinesin. PhD thesis, University of Warwick.

Powell, Hayley Victoria (2009) Development and application of evanescent wave cavity ring-down spectroscopy as a probe of biologically relevant interfaces. PhD thesis, University of Warwick.

Prayogo, Cahyo (2013) Carbon storage and sequestration under different land uses with a focus on biomass crops. PhD thesis, University of Warwick.

Pritchard, Jane (1999) Analysis of drongo, a new Drosophila zinc finger gene expressed during oogenesis and neurogenesis. PhD thesis, University of Warwick.

Rana, Anas A. (2014) Stochastic models for cell populations undergoing transitions. PhD thesis, University of Warwick.

Richardson, Kathryn (2014) Mechanisms of GPCR signal regulation in fission yeast. PhD thesis, University of Warwick.

Robertson, Fiona E. (1996) Starvation-survival in Escherichia coli. PhD thesis, University of Warwick.

Rostain, William (2017) Engineering of RNA sensors and actuators in living cells. PhD thesis, University of Warwick.

Seniya, Chandrabhan (2018) A flexible low-cost quantitative phase imaging microscopy system for label-free imaging of multi-cellular biological samples. PhD thesis, University of Warwick.

Seveno, Nadine Antoinette (2000) Phenazine antibiotic production in liquid culture, on surface agar, and on plant roots by Pseudomonas aureofaciens PGS12. PhD thesis, University of Warwick.

Shaili, Evyenia (2013) Photoactivatable platinum (IV) anticancer complexes. PhD thesis, University of Warwick.

Shepperd, Lindsey A. (2013) Role and regulation of the kinetochore protein Spc7 in fission yeast mitosis. PhD thesis, University of Warwick.

Siamantouras, Eleftherios (2014) Nanomechanical investigation of soft biological cell adhesion using atomic force microscopy. PhD thesis, University of Warwick.

Simmons, Susan (2001) The microbial ecology of acidic environments. PhD thesis, University of Warwick.

Skipton, Michael D. (1974) Studies on the yeasts Saccharomyces cerevisiae and Saccharomycopsis lipolytica. PhD thesis, University of Warwick.

Slade, Susan E. (2013) Application of label-free mass spectrometry-based proteomics to biomarker discovery. PhD thesis, University of Warwick.

Slator, Paddy J. (2015) Characterising cell membrane heterogeneity through analysis of particle trajectories. PhD thesis, University of Warwick.

Stratton, Rebecca Claire (2008) Rapid effects of 17β-estradiol on hepatocytes. PhD thesis, University of Warwick.

Taylor, C. R. (Charles R.) (2013) Isolation of environmental lignin-degrading bacteria and identification of extracellular enzymes. PhD thesis, University of Warwick.

Thompson, Andrew Sydney (1995) The microbial oxidation of methanesulfonic acid in the marine environment. PhD thesis, University of Warwick.

Tibbles, Katherine L. (2013) Regulation of Clb1 during meiosis in saccharomyces cerevisiae. PhD thesis, University of Warwick.

Tusco, Radu (2017) Molecular mechanisms of selective autophagy in innate immunity. PhD thesis, University of Warwick.

Tyson, R. A. (Richard Anthony) (2011) The cartography of cell motion. PhD thesis, University of Warwick.

Tételin, Stéphanie (2008) An analysis of wnt signalling molecules in Xenopus pronephros development. PhD thesis, University of Warwick.

Walker, Kelly L. (2013) Molecular characterisation of PDIp : the pancreas-specific isoform of PDI. PhD thesis, University of Warwick.

Whitworth, David E. (1999) Feedback and molecular interactions in the process of light-induced carotenogenesis in Myxococcus xanthus. PhD thesis, University of Warwick.

Widman, Elizabeth (2012) Trait similarity vs species similarity in coral reef ecology : test of improved monitoring methods using Southwest Madagascar reefs. PhD thesis, University of Warwick.

Williams, Simon (2013) Microbial ecology of anammox bacteria in estuarine and oxygen minimum zone environments. PhD thesis, University of Warwick.

Wright, Harry (2003) Monogamy in the bat-eared fox, Otocyon megalotis. PhD thesis, University of Warwick.

Xu, Yuanwei (2016) Advances in Monte Carlo techniques with application to lattice protein aggregation. PhD thesis, University of Warwick.

Yool, Andrew (1997) The dynamics of open-ocean plankton ecosystem models. PhD thesis, University of Warwick.

Yu, Tung Fai (2014) Musculo-skeletal modelling and parameterisation in vivo. PhD thesis, University of Warwick.

Zou, Cunlu (2010) Applications of Granger causality to biological data. PhD thesis, University of Warwick.

Dataset

Chapman, Lloyd A. C. (2017) Data for Policy recommendations from transmission modelling for the elimination of visceral leishmaniasis in the Indian subcontinent. [Dataset]

Collier, Sharon, Paschke, Peggy, Kay, Robert R. and Bretschneider, Till (2017) Data for Image based modeling of bleb site selection. [Dataset]

Hasan, Muhammad, Fayter, Alice E. R. and Gibson, Matthew I. (2018) Data for Ice recrystallization inhibiting polymers enable glycerol-free cryopreservation of microorganisms. [Dataset]